Pregenerated sensors for DEFB112 (Homo sapiens)
Ensembl gene IDs: ENSG00000180872Ensembl transcript IDs: ENST00000651554.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAGTAGCCTCAACTTAAATACCTTGTTACCACATAATTTTAAGTaGCTAGCTCCCTTTTCTTCATGTGGCCTTAGTCCACAGGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: TSSLNLNTLLPHNFK*LAPFSSCGLSPQVV Trigger: TACAACCTGTGGACTAAGGCCACATGAAGAAAAGGGAGCTAGTCACTTAAAATTATGTGGTAACAAGGTATTTAAGTTGAGGCTACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR GCA 90 bp | AGGAATATCATATATAATTTGGACACCCAGATGCTTTTCCCTATGTaGCCAGGTACTGTGTACAGGATATGTTTTGGTTATAAGATTAAC | + |
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Preference number: 1 (lower is better) Translates to: RNIIYNLDTQMLFPM*PGTVYRICFGYKIN Trigger: GTTAATCTTATAACCAAAACATATCCTGTACACAGTACCTGGGCACATAGGGAAAAGCATCTGGGTGTCCAAATTATATATGATATTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCTTAGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGCACATACCAAGCCCTaGAAAACCATCACCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: CGLSPQVVSHIITKAASQAHTKP*KTITYF Trigger: AAAATAGGTGATGGTTTTGCAGGGCTTGGTATGTGC...TTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACTAAGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTGAGTCTCCTCAAAGAATTCTTGATAATACCTCACTAATGACTCATAATTTTTCTTCTCCACGCTaGTTCTATTCCAGAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: TPESPQRILDNTSLMTHNFSSPR*FYSRVQ Trigger: TTGAACTCTGGAATAGAAGCAGCGTGGAGAAGAAAA...ATTATGAGTCATTAGTGAGGTATTATCAAGAATTCTTTGAGGAGACTCAGGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGGACAAAGCTTTGTTAACACATCCTaGCCACATAAATCCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: SPQVVSHIITKAASQGQSFVNTS*PHKSWV Trigger: TACCCAGGATTTATGTGGCAAGGATGTGTTAACAAA...GCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR GCA 72 bp | ATATCAGGAATATCATATATAATTTGGACACCCAGATaGTTTTCCCTATGTGCCCAGGTACTGTGTACAGGA | + |
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Preference number: 3 (lower is better) Translates to: ISGISYIIWTPR*FSLCAQVLCTG Trigger: TCCTGTACACAGTACCTGGGCACATAGGGAAAAGCATCTGGGTGTCCAAATTATATATGATATTCCTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR GCA 72 bp | ATATATAATTTGGACACCCAGATGCTTTTCCCTATGTaGCCAGGTACTGTGTACAGGATATGTTTTGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: IYNLDTQMLFPM*PGTVYRICFGY Trigger: ATAACCAAAACATATCCTGTACACAGTACCTGGGCACATAGGGAAAAGCATCTGGGTGTCCAAATTATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| 3UTR TCA 72 bp | CTCAACTTAAATACCTTGTTACCACATAATTTTAAGTaGCTAGCTCCCTTTTCTTCATGTGGCCTTAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LNLNTLLPHNFK*LAPFSSCGLSP Trigger: TGGACTAAGGCCACATGAAGAAAAGGGAGCTAGTCACTTAAAATTATGTGGTAACAAGGTATTTAAGTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCCTTAGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAATTAAGACCAACTGCTaGCCCTTTCCCTCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CGLSPQVVSHIITKAASQIKTNC*PFPSRP Trigger: TGGCCTTGAGGGAAAGGGTCAGCAGTTGGTCTTAAT...TTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACTAAGGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | AGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGGACAAAGCGTGAGACCCCTGAAGTaGGGTTCAGAGTTTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: SPQVVSHIITKAASQGQSVRPLK*GSEFGS Trigger: TGATCCAAACTCTGAACCCCACTTCAGGGGTCTCAC...GCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | GTTCAGGGGTCACATCTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAATTAGGGTACCATTCTTaGGTCCCTACTGAGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VQGSHLLSTLSPLLSLLKLGYHS*VPTESF Trigger: AAAGGACTCAGTAGGGACTCAAGAATGGTACCCTAA...TTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAGATGTGACCCCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCCTTAGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAATTTGGACACCCAGATaGTTTTCCCTATGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CGLSPQVVSHIITKAASQIWTPR*FSLCAQ Trigger: CTGGGCACATAGGGAAAAGCATCTGGGTGTCCAAAT...TTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACTAAGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | AGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGGACAAAGCCCCTTCACTTCTGGCTaGTGGAATAAGGACTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SPQVVSHIITKAASQGQSPFTSG*WNKDSK Trigger: TTTGGAGTCCTTATTCCACCAGCCAGAAGTGAAGGG...GCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGGGGTCACATCTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAACTACTAAAGGTGATATaGTGCCCTTCACTTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VQGSHLLSTLSPLLSLLKLLKVI*CPSLLA Trigger: AGCCAGAAGTGAAGGGCACCATATCACCTTTAGTAG...TTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAGATGTGACCCCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | TTTACTAGTTCAGGGGTCACATCTCTTATCAACTCTGTCCCCACTCCTGAGTCTCATAATAACCAAGGCTaGCAGCCAAGGACAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: FTSSGVTSLINSVPTPESHNNQG*QPRTKP Trigger: AGGCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATG...AGACTCAGGAGTGGGGACAGAGTTGATAAGAGATGTGACCCCTGAACTAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGGGGTCACATCTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAATTCACTTCTGGCTGGTaGAATAAGGACTCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VQGSHLLSTLSPLLSLLKFTSGW*NKDSKE Trigger: TTCTTTGGAGTCCTTATTCCACCAGCCAGAAGTGAA...TTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAGATGTGACCCCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCCAGAATCTCACTAAACTTAGCGGTCCCATCATGGATTTTCTTCTCCACTGGGATCCAATTATTTaGGTCCGTAGGGTCACATTC | + |
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Preference number: 4 (lower is better) Translates to: WPQNLTKLSGPIMDFLLHWDPII*VRRVTF Trigger: GAATGTGACCCTACGGACCCAAATAATTGGATCCCA...GTGGAGAAGAAAATCCATGATGGGACCGCTAAGTTTAGTGAGATTCTGGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | AGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGGACAAAGCGCACATACCAAGCCCTaGAAAACCATCACCTATTTT | + |
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Preference number: 4 (lower is better) Translates to: SPQVVSHIITKAASQGQSAHTKP*KTITYF Trigger: AAAATAGGTGATGGTTTTGCAGGGCTTGGTATGTGC...GCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCCAGAATCTCACTAAACTTAGCGGTCCCATCATGGATTTTCTTCTCCACGTGGGGTTCAGAGTTTaGATCATAAACCAAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: WPQNLTKLSGPIMDFLLHVGFRV*IINQNH Trigger: GTGATTTTGGTTTATGATCCAAACTCTGAACCCCAC...GTGGAGAAGAAAATCCATGATGGGACCGCTAAGTTTAGTGAGATTCTGGGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | AGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAAGGACAAAGCAGATTAACCCAAAGCTaGAATGTGTATATGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SPQVVSHIITKAASQGQSRLTQS*NVYMSQ Trigger: CTGTGACATATACACATTTCAGCTTTGGGTTAATCT...GCTTTGTCCTTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TCACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTTCTGTCACGCAGCAATaGGTTGTAGGTCTTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SHYRYCHKLQGFTILLFLSVTQQ*VVGLAQ Trigger: CTGTGCAAGACCTACAACTCATTGCTGCGTGACAGA...AAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | ACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCCCTAAAGGTGATATGGTaGCCTTCACTTCTGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TLSLLPQATGIYHSSFPSLKVIW*PSLLAG Trigger: ACCAGCCAGAAGTGAAGGGCACCATATCACCTTTAG...GGAAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | ACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCCATGCTTTTCCCTATGTaGCCAGGTACTGTGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: TLSLLPQATGIYHSSFPSMLFPM*PGTVYR Trigger: CCTGTACACAGTACCTGGGCACATAGGGAAAAGCAT...GGAAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | ACTAAACTTAGCGGTCCCATCATGGATTTTCTTCTCCACGCTGCTTCTATTCCAAGGTCTTGCACAGTATaGAATCCTAAATTCACTATC | + |
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Preference number: 4 (lower is better) Translates to: TKLSGPIMDFLLHAASIPRSCTV*NPKFTI Trigger: GATAGTGAATTTAGGATTTCATACTGTGCAAGACCT...TGGAATAGAAGCAGCGTGGAGAAGAAAATCCATGATGGGACCGCTAAGTTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TTAAGACCAACTGCTGACCCTTTCCCTCAAGGCCACAATTTAGCCTTTGTTAACCCACATAATTTTAAGTaGCTAGCTCCCTTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRPTADPFPQGHNLAFVNPHNFK*LAPFSS Trigger: TGAAGAAAAGGGAGCTAGTCACTTAAAATTATGTGG...GTTAACAAAGGCTAAATTGTGGCCTTGAGGGAAAGGGTCAGCAGTTGGTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | ACTAAACTTAGCGGTCCCATCATGGATTTTCTTCTCCACGCTGCTTCTATTCCATTGTTAACACATCCTTaGCACATAAATCCTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: TKLSGPIMDFLLHAASIPLLTHP*HINPGY Trigger: ATACCCAGGATTTATGTGGCAAGGATGTGTTAACAA...TGGAATAGAAGCAGCGTGGAGAAGAAAATCCATGATGGGACCGCTAAGTTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TTCACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCCAATCGCTGTACATaGCTTCCACCTACTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FTLSLLPQATGIYHSSFPSNRCT*LPPTKG Trigger: ACCTTTAGTAGGTGGAAGTCATGTACAGCGATTGGA...AGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TCACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTTTCTTGAGTCCCTACTaGGTCCTTTGGGATCCAATT | + |
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Preference number: 4 (lower is better) Translates to: SHYRYCHKLQGFTILLFLFLSPY*VLWDPI Trigger: AATTGGATCCCAAAGGACTCAGTAGGGACTCAAGAA...AAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | CTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAAGAATTCTTGATAATATTTTCTTCTCCACGCTaGTTCTATTCCAGAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLSTLSPLLSLLKEFLIIFSSPR*FYSRVQ Trigger: TTGAACTCTGGAATAGAAGCAGCGTGGAGAAGAAAA...TATTATCAAGAATTCTTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | CTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAAGAATTCTTGATAATATCACTATCATCACATTaGTTTTTACATCGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLSTLSPLLSLLKEFLIISLSSH*FLHRPP Trigger: TGGAGGTCGATGTAAAAATCAATGTGATGATAGTGA...TATTATCAAGAATTCTTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TCACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCATGGATTTCTTCAATaGCGTGAGTCTTTAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SHYRYCHKLQGFTILLFLHGFLQ*RESLGY Trigger: GTACCCTAAAGACTCACGTCATTGAAGAAATCCATG...AAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR TCA 90 bp | TTCACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTATTTCTTCAATGACGTaGGTCTTTAGGGTACCATTC | + |
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Preference number: 4 (lower is better) Translates to: FTLSLLPQATGIYHSSFPISSMT*VFRVPF Trigger: GAATGGTACCCTAAAGACTCACGTCATTGAAGAAAT...AGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | CTCTTATCAACTCTGTCCCCACTCCTGAGTCTCCTCAAAGAATTCTTGATAATATGTATCATCTTCTTGTaGATGGATTTCTTCAATGAC | + |
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Preference number: 4 (lower is better) Translates to: LLSTLSPLLSLLKEFLIICIIFL*MDFFND Trigger: GTCATTGAAGAAATCCATGCACAAGAAGATGATACA...TATTATCAAGAATTCTTTGAGGAGACTCAGGAGTGGGGACAGAGTTGATAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR GCA 90 bp | ACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCCTCACATTATCGTTATTaGCACAAGCTACAGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: TLSLLPQATGIYHSSFPSSHYRY*HKLQGF Trigger: AAATCCCTGTAGCTTGTGGCAATAACGATAATGTGA...GGAAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCTTAGTCCACAGGTTGTAAGTCACATAATAACCAAGGCTGCCAGCCAATCCCTACTGAGTCCTTaGGGATCCAATTATTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: CGLSPQVVSHIITKAASQSLLSP*GSNYLG Trigger: ACCCAAATAATTGGATCCCAAAGGACTCAGTAGGGA...TTGGCTGGCAGCCTTGGTTATTATGTGACTTACAACCTGTGGACTAAGGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CAA 90 bp | TGGCCCCAGAATCTCACTAAACTTAGCGGTCCCATCATGGATTTTCTTCTCCACTTCACATTATCGTTATaGCCACAAGCTACAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: WPQNLTKLSGPIMDFLLHFTLSL*PQATGI Trigger: AATCCCTGTAGCTTGTGGCAATAACGATAATGTGAA...GTGGAGAAGAAAATCCATGATGGGACCGCTAAGTTTAGTGAGATTCTGGGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS TCA 90 bp | ACTATCATCACATTGATTTTTACATCGACCTCCAATCGCTGTACATaGCTTCCACCTACTAAAGGTGATATGGTGCCCTTCACTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: TIITLIFTSTSNRCT*LPPTKGDMVPFTSG Trigger: GCCAGAAGTGAAGGGCACCATATCACCTTTAGTAGGTGGAAGTCATGTACAGCGATTGGAGGTCGATGTAAAAATCAATGTGATGATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS TCA 90 bp | ATCCAATTATTTGGGTCCGTAGGGTCACATTCTGTCACGCAGCAATaGGTTGTAGGTCTTGCACAGTATGAAATCCTAAATTCACTATCA | + |
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Preference number: 5 (lower is better) Translates to: IQLFGSVGSHSVTQQ*VVGLAQYEILNSLS Trigger: TGATAGTGAATTTAGGATTTCATACTGTGCAAGACCTACAACTCATTGCTGCGTGACAGAATGTGACCCTACGGACCCAAATAATTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CAA 90 bp | ACATTATCGTTATTGCCACAAGCTACAGGGATTTACCATTCTTCTTTTCCTTCCAGTGGGGTTCAGAGTTaGGATCATAAACCAAAATCA | + |
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Preference number: 5 (lower is better) Translates to: TLSLLPQATGIYHSSFPSSGVQS*DHKPKS Trigger: TGATTTTGGTTTATGATCCAAACTCTGAACCCCACT...GGAAGGAAAAGAAGAATGGTAAATCCCTGTAGCTTGTGGCAATAACGATAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CAA 90 bp | ACTCCTGAGTCTCCTCAAAGAATTCTTGATAATACCTCACTAATGACTCATAATTTATTTAGCTCCAAATaGACACTGGTCAGAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: TPESPQRILDNTSLMTHNLFSSK*TLVREH Trigger: ATGCTCTCTGACCAGTGTCAATTTGGAGCTAAATAA...ATTATGAGTCATTAGTGAGGTATTATCAAGAATTCTTTGAGGAGACTCAGGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS-3UTR CAA 90 bp | ACTCCTGAGTCTCCTCAAAGAATTCTTGATAATACCTCACTAATGACTCATAATTTCACTATCATCACATaGATTTTTACATCGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: TPESPQRILDNTSLMTHNFTIIT*IFTSTS Trigger: GGAGGTCGATGTAAAAATCAATGTGATGATAGTGAA...ATTATGAGTCATTAGTGAGGTATTATCAAGAATTCTTTGAGGAGACTCAGGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS GCA 72 bp | GCTGTACATGACTTCCACCTACTAAAGGTGATATGGTaGCCTTCACTTCTGGCTGGTGGAATAAGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: AVHDFHLLKVIW*PSLLAGGIRTP Trigger: TGGAGTCCTTATTCCACCAGCCAGAAGTGAAGGGCACCATATCACCTTTAGTAGGTGGAAGTCATGTACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS CCA 72 bp | ATCGCTGTACATGACTTCCACCTACTAAAGGTGATATaGTGCCCTTCACTTCTGGCTGGTGGAATAAGGACT | + |
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Preference number: 6 (lower is better) Translates to: IAVHDFHLLKVI*CPSLLAGGIRT Trigger: AGTCCTTATTCCACCAGCCAGAAGTGAAGGGCACCATATCACCTTTAGTAGGTGGAAGTCATGTACAGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS TCA 72 bp | TTTGGGTCCGTAGGGTCACATTCTGTCACGCAGCAATaGGTTGTAGGTCTTGCACAGTATGAAATCCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: FGSVGSHSVTQQ*VVGLAQYEILN Trigger: ATTTAGGATTTCATACTGTGCAAGACCTACAACTCATTGCTGCGTGACAGAATGTGACCCTACGGACCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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| CDS TCA 72 bp | ACATTGATTTTTACATCGACCTCCAATCGCTGTACATaGCTTCCACCTACTAAAGGTGATATGGTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLIFTSTSNRCT*LPPTKGDMVPF Trigger: GAAGGGCACCATATCACCTTTAGTAGGTGGAAGTCATGTACAGCGATTGGAGGTCGATGTAAAAATCAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651554.2 |
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