Pregenerated sensors for DEF8 (Homo sapiens)
Ensembl gene IDs: ENSG00000140995Ensembl transcript IDs: ENST00000268676.11, ENST00000418391.6, ENST00000561784.5, ENST00000562044.1, ENST00000562163.5, ENST00000563594.6, ENST00000563848.1, ENST00000564379.1, ENST00000564836.1, ENST00000567999.5, ENST00000568760.5, ENST00000569453.5, ENST00000570182.5, ENST00000610455.4, ENST00000617948.4
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AATTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCTTTGACTGGCCATGTTaGGCTAGTGGCCACCACACT | + |
|
Preference number: 3 (lower is better) Translates to: NFSSRTALSNVDSTTRKCFDWPC*ASGHHT Trigger: AGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAA...GCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATTTTGACTGGCCATGTTaGGCTAGTGGCCACCACACT | + |
|
Preference number: 3 (lower is better) Translates to: FLIQNSPVQCRQYNEEMHFDWPC*ASGHHT Trigger: AGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAA...ATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATCATCTGTCTCCCGGCTaGGCTGGATCCGCCCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLIQNSPVQCRQYNEEMHHLSPG*AGSARP Trigger: CGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATG...ATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTAACTTTGACTGGCCATGTTTGGCTAGTGGCCACCACACTGGATAGCGCCTGCCGCAGCTGCTaGACGTCAGAGGCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VNLTLTGHVWLVATTLDSACRSC*TSEARN Trigger: GTTCCTGGCCTCTGACGTCCAGCAGCTGCGGCAGGC...GCTATCCAGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAAGTTAAATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| 3UTR CAA 72 bp | GATGGGGAAACCGAGGCAGAGCAGACAATAAGAACCTaGCCTAAAGCCACCACAGTGGGGAGTGGACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGETEAEQTIRT*PKATTVGSGHH Trigger: ATGGTGTCCACTCCCCACTGTGGTGGCTTTAGGCAAGGTTCTTATTGTCTGCTCTGCCTCGGTTTCCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000268676.11 ENST00000563594.6 ENST00000570182.5 ENST00000617948.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATATCGCCTGCCGCAGCTaGTGGACGTCAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIQNSPVQCRQYNEEMHIACRS*WTSEAR Trigger: CCTGGCCTCTGACGTCCAGCAGCTGCGGCAGGCGAT...ATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATAGCCTGCCGCAGCTGCTaGACGTCAGAGGCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSRTALSNVDSTTRKCIACRSC*TSEARN Trigger: GTTCCTGGCCTCTGACGTCCAGCAGCTGCGGCAGGC...TATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATACACTCCTCGATCGCCTaGCGCAGCTGCTGGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSRTALSNVDSTTRKCIHSSIA*RSCWTS Trigger: TGACGTCCAGCAGCTGCGGCAGGCGATCGAGGAGTG...TATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATCACTCCTCGATCGCCTaGCGCAGCTGCTGGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLIQNSPVQCRQYNEEMHHSSIA*RSCWTS Trigger: TGACGTCCAGCAGCTGCGGCAGGCGATCGAGGAGTG...ATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | AATTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCTCCTCACTCCTCGTCTaGGTCTCGGCCCACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFSSRTALSNVDSTTRKCSSLLV*VSAHLC Trigger: GCACAGGTGGGCCGAGACCCAGACGAGGAGTGAGGA...GCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR GCA 90 bp | GTTAATTTAACTTTGACTGGCCATGTTTGGCTAGTGGCCACCACACTGGATAGCGTCTCGGCCCACCTGTaGAGGTGTACCAGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNLTLTGHVWLVATTLDSVSAHL*RCTRSE Trigger: TTCAGACCTGGTACACCTGCACAGGTGGGCCGAGAC...GCTATCCAGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAAGTTAAATTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATATTTAGTAGCTTCAGCCGGAGGTaGATGAGTCGCACCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTALSNVDSTTRKCIFSSFSRR*MSRTTA Trigger: TGCCGTGGTGCGACTCATCCACCTCCGGCTGAAGCT...ACTAAATATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | TTTAATTTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAAAGCTTCAGCCGGAGGTaGATGAGTCGCACCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FNFSSRTALSNVDSTTRKSFSRR*MSRTTA Trigger: TGCCGTGGTGCGACTCATCCACCTCCGGCTGAAGCT...TTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAAATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | GTTAATTTAACTTTGACTGGCCATGTTTGGCTAGTGGCCACCACACTGGATAGCCGGAGGCAGGAACTTTaGTCTCTCTCATTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VNLTLTGHVWLVATTLDSRRQEL*SLSFLT Trigger: AGTGAGGAATGAGAGAGACCAAAGTTCCTGCCTCCG...GCTATCCAGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAAGTTAAATTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATATTTAGTCGGAGGCAGGAACTTTaGTCTCTCTCATTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRTALSNVDSTTRKCIFSRRQEL*SLSFLT Trigger: AGTGAGGAATGAGAGAGACCAAAGTTCCTGCCTCCG...ACTAAATATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| 3UTR CAA 72 bp | GTACAACGAGGAAATGCATATTTAGTTAATTTAACTTaGACTGGCCATGTTTGGCTAGTGGCCACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VQRGNAYLVNLT*TGHVWLVATTL Trigger: CAGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAAGTTAAATTAACTAAATATGCATTTCCTCGTTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS CCA 90 bp | TCGGCACCTGCTGACCGCCGCCTCGCATCTGTCTCCCGGCTGCGCTaGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAGCCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPADRRLASVSRLR*IRPAAPLRWIQPRA Trigger: AGCGCGGGGCTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGCAGGTGCCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617948.4 |
||
| CDS GCA 90 bp | TGGGTTCGGCACCTGCTGACCGCCGCCTCGCATCTGTCTCCCGGCTaGGCTGGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WVRHLLTAASHLSPG*AGSARPPRYAGSSP Trigger: GGGGCTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGCAGGTGCCGAACCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617948.4 |
||
| CDS CCA 90 bp | AGCATCCCACCTGACCGCCGCCTCGCATCTGTCTCCCGGCTGCGCTaGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAGCCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIPPDRRLASVSRLR*IRPAAPLRWIQPRA Trigger: AGCGCGGGGCTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGGTGGGATGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000567999.5 ENST00000610455.4 |
||
| CDS GCA 90 bp | TGCTGCCGATCCTGGAGCTGCCAAGTCCCAGCAGCCGTGACGCCCTaGACCGGGGAGGGCCCCTCCCACCGCCCACCCATGGTCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCRSWSCQVPAAVTP*TGEGPSHRPPMVAA Trigger: TGCAGCGACCATGGGTGGGCGGTGGGAGGGGCCCTCCCCGGTGCAGGGCGTCACGGCTGCTGGGACTTGGCAGCTCCAGGATCGGCAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS GCA 90 bp | TCCATAGCATCCCACCTGACCGCCGCCTCGCATCTGTCTCCCGGCTaGGCTGGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SIASHLTAASHLSPG*AGSARPPRYAGSSP Trigger: GGGGCTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGGTGGGATGCTATGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567999.5 ENST00000610455.4 |
||
| CDS GCA 90 bp | ATCGCCTGCCGCAGCTGCTGGACGTCAGAGGCCAGGAACAGACCCTaGCCAGGTTGGGGGCGGGGGCAGTCAAAGGCCCATCCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IACRSCWTSEARNRP*PGWGRGQSKAHPQG Trigger: GCCCTGTGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTGTTCCTGGCCTCTGACGTCCAGCAGCTGCGGCAGGCGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000561784.5 |
||
| CDS GCA 90 bp | GCCCTGCACCGGGGAGGGCCCCTCCCACCGCCCACCCATGGTCGCTaGAGTGGTCAGGGCCCAGGTGCTCACAGAGAAACGAGCTACACA | + |
|
Preference number: 5 (lower is better) Translates to: ALHRGGPLPPPTHGR*SGQGPGAHRETSYT Trigger: TGTGTAGCTCGTTTCTCTGTGAGCACCTGGGCCCTGACCACTGCAGCGACCATGGGTGGGCGGTGGGAGGGGCCCTCCCCGGTGCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS GCA 90 bp | CAGACCCTGCCCAGGTTGGGGGCGGGGGCAGTCAAAGGCCCATCCTaGAGGAGCTCCCTGTTAAGGCCCATCCGCCGAGACAGGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QTLPRLGAGAVKGPS*RSSLLRPIRRDRPR Trigger: TCTGGGCCTGTCTCGGCGGATGGGCCTTAACAGGGAGCTCCTGCAGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS GCA 90 bp | ATCGCCTGCCGCAGCTGCTGGACGTCAGAGGCCAGGAACAGACCCTaGCCAGGTTGGGGGCGGGGGCAGTCAAAGGCCCATCCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IACRSCWTSEARNRP*PGWGRGQSKAHPAG Trigger: TCCTGCAGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTGTTCCTGGCCTCTGACGTCCAGCAGCTGCGGCAGGCGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS CCA 90 bp | CGCAGCTGCTGGACGTCAGAGGCCAGGAACAGACCCTGCCCAGGTTaGGGGCGGGGGCAGTCAAAGGCCCATCCACAGGGCGGGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSCWTSEARNRPCPG*GRGQSKAHPQGGRS Trigger: ACTTCTCCCGCCCTGTGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTGTTCCTGGCCTCTGACGTCCAGCAGCTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561784.5 |
||
| CDS CCA 90 bp | GCACCGGGGAGGGCCCCTCCCACCGCCCACCCATGGTCGCTGCAGTaGTCAGGGCCCAGGTGCTCACAGAGAAACGAGCTACACAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: APGRAPPTAHPWSLQ*SGPRCSQRNELHKG Trigger: ACCCTTGTGTAGCTCGTTTCTCTGTGAGCACCTGGGCCCTGACCACTGCAGCGACCATGGGTGGGCGGTGGGAGGGGCCCTCCCCGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS CCA 90 bp | CGCAGCTGCTGGACGTCAGAGGCCAGGAACAGACCCTGCCCAGGTTaGGGGCGGGGGCAGTCAAAGGCCCATCCTGCAGGAGCTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSCWTSEARNRPCPG*GRGQSKAHPAGAPC Trigger: ACAGGGAGCTCCTGCAGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTGTTCCTGGCCTCTGACGTCCAGCAGCTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS GCA 90 bp | CCTGCCCGCGGCGTGACCACCAGGAAGCGGTGTCATCACTGCAGCTaGCACCCCGAGAACCTGAGAAGTCACCCCGGTGTGCGGAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PARGVTTRKRCHHCS*HPENLRSHPGVRSQ Trigger: TTGACTCCGCACACCGGGGTGACTTCTCAGGTTCTCGGGGTGGCAGCTGCAGTGATGACACCGCTTCCTGGTGGTCACGCCGCGGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000268676.11 |
||
| CDS GCA 90 bp | CCTCCCACCGCCCACCCATGGTCGCTGCAGTGGTCAGGGCCCAGGTaGTCACAGAGAAACGAGCTACACAAGGGTCTGGGCCCCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPTAHPWSLQWSGPR*SQRNELHKGLGPRS Trigger: ACTCCTGGGGCCCAGACCCTTGTGTAGCTCGTTTCTCTGTGAGCACCTGGGCCCTGACCACTGCAGCGACCATGGGTGGGCGGTGGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS GCA 90 bp | CCCTCACCCAGAGAAGGAAACTCAACCCAGAGGGCACCGAGGACTTaGTCCAGGGCAGGAAAGGTGGCAGCACGGTCAAGGTCCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPREGNSTQRAPRT*SRAGKVAARSRSTR Trigger: CCGGGTGGACCTTGACCGTGCTGCCACCTTTCCTGCCCTGGAGCAAGTCCTCGGTGCCCTCTGGGTTGAGTTTCCTTCTCTGGGTGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS CCA 90 bp | GGTCAGGGCCCAGGTGCTCACAGAGAAACGAGCTACACAAGGGTCTaGGCCCCAGGAGTAGAATCCAGGAGCCCCAGGAAGCCGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQGPGAHRETSYTRV*APGVESRSPRKPTG Trigger: CCCTGTCGGCTTCCTGGGGCTCCTGGATTCTACTCCTGGGGCCCAGACCCTTGTGTAGCTCGTTTCTCTGTGAGCACCTGGGCCCTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS CCA 90 bp | GCTACGCCTGGGGAAGCCGCTGGAAACCTCCTGGTGTTTAAAACATaGCCAGAGGAGCGTCAAGGAAGGCACGCTGGCAGGGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATPGEAAGNLLVFKT*PEERQGRHAGRDTS Trigger: GGAGGTGTCCCTGCCAGCGTGCCTTCCTTGACGCTCCTCTGGCCATGTTTTAAACACCAGGAGGTTTCCAGCGGCTTCCCCAGGCGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS TCA 90 bp | GTGGCAGCACGGTCAAGGTCCACCCGGTGCTGCGTGCTCCTAGCCTaGCCTGCCTGCCCACAGACCTCTGAAAACCTAATGTTTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAARSRSTRCCVLLA*PACPQTSENLMFES Trigger: ACTTTCAAACATTAGGTTTTCAGAGGTCTGTGGGCAGGCAGGTCAGGCTAGGAGCACGCAGCACCGGGTGGACCTTGACCGTGCTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS TCA 90 bp | AGCCCAGAGCTGCTCAGAACAGACTGGCACTGTCATCACATATGGTaGCCAGCCCAGGAAAAAGGTGCAGGAGCTACGCCTGGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPELLRTDWHCHHIW*PAQEKGAGATPGEA Trigger: GGCTTCCCCAGGCGTAGCTCCTGCACCTTTTTCCTGGGCTGGTCACCATATGTGATGACAGTGCCAGTCTGTTCTGAGCAGCTCTGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS GCA 90 bp | AGACTGGCACTGTCATCACATATGGTGACCAGCCCAGGAAAAAGGTaGAGGAGCTACGCCTGGGGAAGCCGCTGGAAACCTCCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLALSSHMVTSPGKR*RSYAWGSRWKPPGV Trigger: AACACCAGGAGGTTTCCAGCGGCTTCCCCAGGCGTAGCTCCTGCACCTTTTTCCTGGGCTGGTCACCATATGTGATGACAGTGCCAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS CCA 90 bp | AAAGCACACACAGACCCAAGGACTGCATCAGGAACATCTGTGGCCTaGGACCCACCACCTTCTTTTGTTGTCACCTTCAAGACACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: KAHTDPRTASGTSVA*DPPPSFVVTFKTPP Trigger: GGGTGGTGTCTTGAAGGTGACAACAAAAGAAGGTGGTGGGTCCCAGGCCACAGATGTTCCTGATGCAGTCCTTGGGTCTGTGTGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562044.1 |
||
| CDS CCA 90 bp | AGGCCAAAGCACACACAGACCCAAGGACTGCATCAGGAACATCTGTaGCCTGGGACCCACCACCTTCTTTTGTTGTCACCTTCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RPKHTQTQGLHQEHL*PGTHHLLLLSPSRH Trigger: GTGTCTTGAAGGTGACAACAAAAGAAGGTGGTGGGTCCCAGGCCACAGATGTTCCTGATGCAGTCCTTGGGTCTGTGTGTGCTTTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562044.1 |
||
| CDS TCA 90 bp | CTGTTTCCTCATGAATATTCTACTTTCTACATTCCCAGGGATACCTaGATCAGCACAGGGGACACAGGGCAGCCAGGCCAAAGCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LFPHEYSTFYIPRDT*ISTGDTGQPGQSTH Trigger: GTGTGTGCTTTGGCCTGGCTGCCCTGTGTCCCCTGTGCTGATTCAGGTATCCCTGGGAATGTAGAAAGTAGAATATTCATGAGGAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562044.1 ENST00000563848.1 |
||
| CDS-3UTR CAA 90 bp | TTAGTTAATTTAACTTTGACTGGCCATGTTTGGCTAGTGGCCACCACACTGGATGCGGAGGCAGGAACTTaGGTCTCTCTCATTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVNLTLTGHVWLVATTLDAEAGT*VSLIPH Trigger: GTGAGGAATGAGAGAGACCAAAGTTCCTGCCTCCGC...ATCCAGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAAGTTAAATTAACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCATCCAGAACAGCCCTGTCCAATGTAGACAGTACAACGAGGAAATGCATATTTGACTGGCCATGTTaGGCTAGTGGCCACCACACT | + |
|
Preference number: 5 (lower is better) Translates to: FSSRTALSNVDSTTRKCIFDWPC*ASGHHT Trigger: AGTGTGGTGGCCACTAGCCAAACATGGCCAGTCAAA...TATGCATTTCCTCGTTGTACTGTCTACATTGGACAGGGCTGTTCTGGATGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS-3UTR CAA 90 bp | CAACGAGGAAATGCATATTTAGTTAATTTAACTTTGACTGGCCATGTTTGGCTAGCGGAGGCAGGAACTTaGGTCTCTCTCATTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRGNAYLVNLTLTGHVWLAEAGT*VSLIPH Trigger: GTGAGGAATGAGAGAGACCAAAGTTCCTGCCTCCGC...TAGCCAAACATGGCCAGTCAAAGTTAAATTAACTAAATATGCATTTCCTCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418391.6 ENST00000610455.4 |
||
| CDS CCA 72 bp | CCTGACCGCCGCCTCGCATCTGTCTCCCGGCTGCGCTaGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PDRRLASVSRLR*IRPAAPLRWIQ Trigger: CTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000567999.5 ENST00000610455.4 |
||
| CDS CCA 72 bp | GCTGACCGCCGCCTCGCATCTGTCTCCCGGCTGCGCTaGATCCGCCCGGCCGCCCCGCTACGCTGGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADRRLASVSRLR*IRPAAPLRWIQ Trigger: CTGGATCCAGCGTAGCGGGGCGGCCGGGCGGATCCAGCGCAGCCGGGAGACAGATGCGAGGCGGCGGTCAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617948.4 |
||
| CDS GCA 72 bp | TCCTGGAGCTGCCAAGTCCCAGCAGCCGTGACGCCCTaGACCGGGGAGGGCCCCTCCCACCGCCCACCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWSCQVPAAVTP*TGEGPSHRPPM Trigger: CATGGGTGGGCGGTGGGAGGGGCCCTCCCCGGTGCAGGGCGTCACGGCTGCTGGGACTTGGCAGCTCCAGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS GCA 72 bp | CGGGGAGGGCCCCTCCCACCGCCCACCCATGGTCGCTaGAGTGGTCAGGGCCCAGGTGCTCACAGAGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: RGGPLPPPTHGR*SGQGPGAHRET Trigger: CGTTTCTCTGTGAGCACCTGGGCCCTGACCACTGCAGCGACCATGGGTGGGCGGTGGGAGGGGCCCTCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS CAA 90 bp | CCGCAGCTGCTGGACGTCAGAGGCCAGGAACAGACCCTGCCCAGGTaGGGGGCGGGGGCAGTCAAAGGCCCATCCTGCAGGAGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQLLDVRGQEQTLPR*GAGAVKGPSCRSSL Trigger: CAGGGAGCTCCTGCAGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGGCAGGGTCTGTTCCTGGCCTCTGACGTCCAGCAGCTGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS GCA 72 bp | CCCAGGTTGGGGGCGGGGGCAGTCAAAGGCCCATCCTaGAGGAGCTCCCTGTTAAGGCCCATCCGCCGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRLGAGAVKGPS*RSSLLRPIRRD Trigger: GTCTCGGCGGATGGGCCTTAACAGGGAGCTCCTGCAGGATGGGCCTTTGACTGCCCCCGCCCCCAACCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS TCA 72 bp | CATAGCATCCCACCTGAGGGCCAGGCAGGGCCAGGATaGGTCCCCAGGTACCAGGCTCACCACGGACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: HSIPPEGQAGPG*VPRYQAHHGPP Trigger: GGGTGGTCCGTGGTGAGCCTGGTACCTGGGGACTCATCCTGGCCCTGCCTGGCCCTCAGGTGGGATGCTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564836.1 |
||
| CDS CCA 72 bp | AGAGGGCACCGAGGACTTGCTCCAGGGCAGGAAAGGTaGCAGCACGGTCAAGGTCCACCCGGTGCTGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGHRGLAPGQER*QHGQGPPGAAC Trigger: GCACGCAGCACCGGGTGGACCTTGACCGTGCTGCCACCTTTCCTGCCCTGGAGCAAGTCCTCGGTGCCCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS GCA 72 bp | GGCGTGACCACCAGGAAGCGGTGTCATCACTGCAGCTaGCACCCCGAGAACCTGAGAAGTCACCCCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GVTTRKRCHHCS*HPENLRSHPGV Trigger: CACACCGGGGTGACTTCTCAGGTTCTCGGGGTGGCAGCTGCAGTGATGACACCGCTTCCTGGTGGTCACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000268676.11 |
||
| CDS GCA 72 bp | GCCCACCCATGGTCGCTGCAGTGGTCAGGGCCCAGGTaGTCACAGAGAAACGAGCTACACAAGGGTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AHPWSLQWSGPR*SQRNELHKGLG Trigger: GCCCAGACCCTTGTGTAGCTCGTTTCTCTGTGAGCACCTGGGCCCTGACCACTGCAGCGACCATGGGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564379.1 |
||
| CDS CAA 90 bp | CCCCTCACCCAGAGAAGGAAACTCAACCCAGAGGGCACCGAGGACTaGCTCCAGGGCAGGAAAGGTGGCAGCACGGTCAAGGTCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: PLTQRRKLNPEGTED*LQGRKGGSTVKVHP Trigger: CGGGTGGACCTTGACCGTGCTGCCACCTTTCCTGCCCTGGAGCAAGTCCTCGGTGCCCTCTGGGTTGAGTTTCCTTCTCTGGGTGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS TCA 72 bp | CGGTCAAGGTCCACCCGGTGCTGCGTGCTCCTAGCCTaGCCTGCCTGCCCACAGACCTCTGAAAACCTAATG | + |
|
Preference number: 6 (lower is better) Translates to: RSRSTRCCVLLA*PACPQTSENLM Trigger: CATTAGGTTTTCAGAGGTCTGTGGGCAGGCAGGTCAGGCTAGGAGCACGCAGCACCGGGTGGACCTTGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS GCA 72 bp | AGAGAAGGAAACTCAACCCAGAGGGCACCGAGGACTTaGTCCAGGGCAGGAAAGGTGGCAGCACGGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: REGNSTQRAPRT*SRAGKVAARSR Trigger: CCTTGACCGTGCTGCCACCTTTCCTGCCCTGGAGCAAGTCCTCGGTGCCCTCTGGGTTGAGTTTCCTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568760.5 |
||
| CDS CCA 72 bp | GGGGAAGCCGCTGGAAACCTCCTGGTGTTTAAAACATaGCCAGAGGAGCGTCAAGGAAGGCACGCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GEAAGNLLVFKT*PEERQGRHAGR Trigger: CCTGCCAGCGTGCCTTCCTTGACGCTCCTCTGGCCATGTTTTAAACACCAGGAGGTTTCCAGCGGCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS CCA 72 bp | CAGGAGCTACGCCTGGGGAAGCCGCTGGAAACCTCCTaGTGTTTAAAACATGGCCAGAGGAGCGTCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QELRLGKPLETS*CLKHGQRSVKE Trigger: TTCCTTGACGCTCCTCTGGCCATGTTTTAAACACCAGGAGGTTTCCAGCGGCTTCCCCAGGCGTAGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS CAA 72 bp | CAGGAACATCTGTGGCCTGGGACCCACCACCTTCTTTaGTTGTCACCTTCAAGACACCACCCGTCCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QEHLWPGTHHLL*LSPSRHHPSLS Trigger: GGACAAGGACGGGTGGTGTCTTGAAGGTGACAACAAAAGAAGGTGGTGGGTCCCAGGCCACAGATGTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562044.1 |
||
| CDS TCA 72 bp | CTGCTCAGAACAGACTGGCACTGTCATCACATATGGTaGCCAGCCCAGGAAAAAGGTGCAGGAGCTACGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLRTDWHCHHIW*PAQEKGAGATP Trigger: AGGCGTAGCTCCTGCACCTTTTTCCTGGGCTGGTCACCATATGTGATGACAGTGCCAGTCTGTTCTGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569453.5 ENST00000617948.4 |
||
| CDS CCA 72 bp | CACACACAGACCCAAGGACTGCATCAGGAACATCTGTaGCCTGGGACCCACCACCTTCTTTTGTTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HTQTQGLHQEHL*PGTHHLLLLSP Trigger: AGGTGACAACAAAAGAAGGTGGTGGGTCCCAGGCCACAGATGTTCCTGATGCAGTCCTTGGGTCTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562044.1 |
||
| CDS CAA 72 bp | GAACATCTGTGGCCTGGGACCCACCACCTTCTTTTGTaGTCACCTTCAAGACACCACCCGTCCTTGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: EHLWPGTHHLLL*SPSRHHPSLSM Trigger: CATGGACAAGGACGGGTGGTGTCTTGAAGGTGACAACAAAAGAAGGTGGTGGGTCCCAGGCCACAGATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562044.1 |
||
| CDS CAA 72 bp | GGCATGCACGTCCAGGAGGTCCCTTCCTTCTCTATCTaGTCACAGAGTTCACCACCCCAGCACACAACGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GMHVQEVPSFSI*SQSSPPQHTTY Trigger: ATACGTTGTGTGCTGGGGTGGTGAACTCTGTGACAAGATAGAGAAGGAAGGGACCTCCTGGACGTGCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562163.5 |
||
| CDS TCA 72 bp | CATGAATATTCTACTTTCTACATTCCCAGGGATACCTaGATCAGCACAGGGGACACAGGGCAGCCAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: HEYSTFYIPRDT*ISTGDTGQPGQ Trigger: TTGGCCTGGCTGCCCTGTGTCCCCTGTGCTGATTCAGGTATCCCTGGGAATGTAGAAAGTAGAATATTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562044.1 ENST00000563848.1 |
||