RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDIAS (Homo sapiens)

Ensembl gene IDs: ENSG00000165490

Ensembl transcript IDs: ENST00000329143.4, ENST00000524921.5, ENST00000525361.5, ENST00000525388.5, ENST00000528189.5, ENST00000528262.5, ENST00000528759.5, ENST00000532277.5, ENST00000532589.5, ENST00000532764.5, ENST00000533655.6, ENST00000533750.1

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGAATGGGATCATGGCAGCTACTGGAACCAGTGGCCTCTGCAATaGAGATGGACTTTCTGTTCTGCTGAAGAGTACCAAAGGCCTTAC +
Preference number: 1 (lower is better)
Translates to: PEWDHGSYWNQWPLQ*RWTFCSAEEYQRPY
Trigger: GTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 90 bp GGCTCCATGAATCCTGAATGGGATCATGGCAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGGACTTTCTGTTCTGCTGAAGAGTAC +
Preference number: 1 (lower is better)
Translates to: GSMNPEWDHGSYWNQ*PLQWRWTFCSAEEY
Trigger: GTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 90 bp TGGGATCATGGCAGCTACTGGAACCAGTGGCCTCTGCAATGGAGATaGACTTTCTGTTCTGCTGAAGAGTACCAAAGGCCTTACTTTGTT +
Preference number: 1 (lower is better)
Translates to: WDHGSYWNQWPLQWR*TFCSAEEYQRPYFV
Trigger: AACAAAGTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
3UTR CCA 90 bp ATGAAACAAGGCTCCATGAATCCTGAATGGGATCATGGCAGCTACTaGAACCAGTGGCCTCTGCAATGGAGATGGACTTTCTGTTCTGCT +
Preference number: 1 (lower is better)
Translates to: MKQGSMNPEWDHGSY*NQWPLQWRWTFCSA
Trigger: AGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR TCA 90 bp AGAAACTTGTTCAGGCTTTCAGAGAATGGCAGATCATCCCAAATTTaGGGGTCACCATCCTGGGAACTGCTGGCTGTCTCTTCAAGTCTG +
Preference number: 1 (lower is better)
Translates to: RNLFRLSENGRSSQI*GSPSWELLAVSSSL
Trigger: CAGACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTGAACAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 90 bp CTCACTTTCAAGAACTGCCAGAAACTTGTTCAGGCTTTCAGAGAATaGCAGATCATCCCAAATTTGAGGGTCACCATCCTGGGAACTGCT +
Preference number: 1 (lower is better)
Translates to: LTFKNCQKLVQAFRE*QIIPNLRVTILGTA
Trigger: AGCAGTTCCCAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTGAACAAGTTTCTGGCAGTTCTTGAAAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR TCA 90 bp CTGGAACCAGTGGCCTCTGCAATGGAGATGGACTTTCTGTTCTGCTaGAGAGTACCAAAGGCCTTACTTTGTTCTGAAGCTGAAAAATCA +
Preference number: 1 (lower is better)
Translates to: LEPVASAMEMDFLFC*RVPKALLCSEAEKS
Trigger: TGATTTTTCAGCTTCAGAACAAAGTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
3UTR TCA 90 bp GCTGTACTCTTTTTATCCATATATGAAACAAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTACTGGAACCAGTGGCCTCTGCAATG +
Preference number: 1 (lower is better)
Translates to: AVLFLSIYETRLHES*MGSWQLLEPVASAM
Trigger: CATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCATATATGGATAAAAAGAGTACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 90 bp ACTACTGACATCTGCCTGGGTTACAGCAATCTCACTTTCAAGAACTaGCAGAAACTTGTTCAGGCTTTCAGAGAATGGCAGATCATCCCA +
Preference number: 1 (lower is better)
Translates to: TTDICLGYSNLTFKN*QKLVQAFREWQIIP
Trigger: TGGGATGATCTGCCATTCTCTGAAAGCCTGAACAAGTTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 90 bp GCTTTGACTATTACTTGTGATGATCTTAAAGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTCTGGGGAGTCACAGATAACCTGCTG +
Preference number: 1 (lower is better)
Translates to: ALTITCDDLKAIGGV*RAPVVLWGVTDNLL
Trigger: CAGCAGGTTATCTGTGACTCCCCAGAGAACTACTGGAGCCCTGCATACACCACCTATAGCTTTAAGATCATCACAAGTAATAGTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 90 bp TACTCTTTTTATCCATATATGAAACAAGGCTCCATGAATCCTGAATaGGATCATGGCAGCTACTGGAACCAGTGGCCTCTGCAATGGAGA +
Preference number: 1 (lower is better)
Translates to: YSFYPYMKQGSMNPE*DHGSYWNQWPLQWR
Trigger: TCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCATATATGGATAAAAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 90 bp GGTGTTGGAGAGCATGTTCTTGAATGCCTAGAGTCAGATAGGCTTTaGAAGGATAATTTTTGTGAAGGCTGGATGAAGTCTTCAGAAAGT +
Preference number: 1 (lower is better)
Translates to: GVGEHVLECLESDRL*KDNFCEGWMKSSES
Trigger: ACTTTCTGAAGACTTCATCCAGCCTTCACAAAAATTATCCTTGCAAAGCCTATCTGACTCTAGGCATTCAAGAACATGCTCTCCAACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAACACCATCCTGGGAACTaGTGGCTGTCTCTTCAAGTC +
Preference number: 2 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEHHPGN*WLSLQV
Trigger: GACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTG...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGG +
Preference number: 2 (lower is better)
Translates to: SGDQALRVSHTEGGPFSESYWNQ*PLQWRW
Trigger: CCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCT...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKRLHES*MGSWQL
Trigger: TAGCTGCCATGATCCCATTCAGGATTCATGGAGCCT...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CAA 90 bp CAGAAACTTGTTCAGGCTTTCAGAGAATGGCAGATCATCCCAAATTaGAGGGTCACCATCCTGGGAACTGCTGGCTGTCTCTTCAAGTCT +
Preference number: 2 (lower is better)
Translates to: QKLVQAFREWQIIPN*RVTILGTAGCLFKS
Trigger: AGACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTGAACAAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCTTTCCGTACCCCTaGAGGCAAACATTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCCFPYP*RQTFPN
Trigger: GTTTGGAAATGTTTGCCTTCAGGGGTACGGAAAGCA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
3UTR-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGCATGCAGATCTCTTCTaGAGGCTAGTTGGGGTATCT +
Preference number: 2 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKHADLF*RLVGVS
Trigger: AGATACCCCAACTAGCCTTCAGAAGAGATCTGCATG...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAGGTGCTGCTAAGACTTaGATGTCTGGACATTTGGAA +
Preference number: 2 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEGAAKT*MSGHLE
Trigger: TTCCAAATGTCCAGACATTCAAGTCTTAGCAGCACC...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDAIGGV*RAPVVL
Trigger: GAGAACTACTGGAGCCCTGCATACACCACCTATAGC...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGTGGCTGCCAGAATTTTaGAAAAGTATCCTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKWLPEF*KSILAA
Trigger: TGCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCA...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACCCTTGCTGCAGGACTTaGAAAAATCAGAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDPCCRT*KNQKCC
Trigger: ACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGG...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGCTGTCTCTTCAAGTCTaGGTAACGAAGGTGGACAAC +
Preference number: 2 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKLSLQV*VTKVDN
Trigger: GTTGTCCACCTTCGTTACTCAGACTTGAAGAGACAG...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACACTCTCCCTGTGTGGTaGGATTCTGATAGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDTLPVW*DSDSLL
Trigger: AAGAAGACTATCAGAATCTCACCACACAGGGAGAGT...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGCGAAGGTGGACAACATaGAGATCTCTTCTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKRRWTT*RSLLKA
Trigger: AGCCTTCAGAAGAGATCTGCATGTTGTCCACCTTCG...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGCCTACTACTGACATCTaGCTGGGTTACAGCAATCTC +
Preference number: 2 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKPTTDI*LGYSNL
Trigger: GAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGG...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACCAGGCTTTCAGAGAATaGCAGATCATCCCAAATTTG +
Preference number: 2 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDQAFRE*QIIPNL
Trigger: CAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTG...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTTGCTTTCCGTACCCCTaGAGGCAAACATTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFCFPYP*RQTFPN
Trigger: GTTTGGAAATGTTTGCCTTCAGGGGTACGGAAAGCA...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATCAATTTCATGATGACTaGTGTGAACTGCACTCAGCT +
Preference number: 2 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNQFHDD*CELHSA
Trigger: AGCTGAGTGCAGTTCACAGCAGTCATCATGAAATTG...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTCTACTGACATCTGCCTaGGTTACAGCAATCTCACTT +
Preference number: 2 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFLLTSA*VTAISL
Trigger: AAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAG...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTGAATGTCTGGACATTTaGAAATCCAGCCTGAACTTT +
Preference number: 2 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIECLDI*KSSLNF
Trigger: AAAGTTCAGGCTGGATTTCCAAATGTCCAGACATTC...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCAGTGAAACAATGCAAGTaGATTCAAGTGATGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TFITNRIALCYVVIDMSPVKQCK*IQVMAA
Trigger: GGCAGCCATCACTTGAATTCACTTGCATTGTTTCAC...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR TCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGGATTTCCTTTACAGTTaGAAAGGAAGTCATCTTTGC +
Preference number: 2 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKDFLYS*KGSHLC
Trigger: GCAAAGATGACTTCCTTTTCAACTGTAAAGGAAATC...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGGTCCTGTTTTCAATTTaGTTCTCTCCAAGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKVLFSI*FSPSVQ
Trigger: TTGAACACTTGGAGAGAAGCAAATTGAAAACAGGAC...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp ACTACTGACATCTGCCTGGGTTACAGCAATCTCACTTTCAAGAACTGCCAGAAAAAACATGGTAGCTCATaGTGGGACCTATTTTTAATT +
Preference number: 2 (lower is better)
Translates to: TTDICLGYSNLTFKNCQKKHGSS*WDLFLI
Trigger: AATTAAAAATAGGTCCCAGCATGAGCTACCATGTTT...TTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR GCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTGAGTCACAGATAACCTaGTGTGGTCTGCATGAAATT +
Preference number: 2 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFESQIT*CGLHEI
Trigger: AATTTCATGCAGACCACAGCAGGTTATCTGTGACTC...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCATTATTTAGACTAGAATaGTCACTCTCCCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: TFITNRIALCYVVIDMSPLFRLE*SLSLCG
Trigger: ACCACACAGGGAGAGTGACCATTCTAGTCTAAATAA...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTATTTCCACTGCACTGTaGAAGGATTTTGTATTACTT +
Preference number: 2 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFISTAL*KDFVLL
Trigger: AAGTAATACAAAATCCTTCCACAGTGCAGTGGAAAT...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 72 bp GGCAGCTACTGGAACCAGTGGCCTCTGCAATGGAGATaGACTTTCTGTTCTGCTGAAGAGTACCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: GSYWNQWPLQWR*TFCSAEEYQRP
Trigger: AGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
3UTR CCA 72 bp GGCTCCATGAATCCTGAATGGGATCATGGCAGCTACTaGAACCAGTGGCCTCTGCAATGGAGATGGACTTTC +
Preference number: 3 (lower is better)
Translates to: GSMNPEWDHGSY*NQWPLQWRWTF
Trigger: GAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 72 bp AATCCTGAATGGGATCATGGCAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGGACTTTCTGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: NPEWDHGSYWNQ*PLQWRWTFCSA
Trigger: AGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR TCA 72 bp GTGGCCTCTGCAATGGAGATGGACTTTCTGTTCTGCTaGAGAGTACCAAAGGCCTTACTTTGTTCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: VASAMEMDFLFC*RVPKALLCSEA
Trigger: AGCTTCAGAACAAAGTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCAGAGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
3UTR CCA 72 bp TATCCATATATGAAACAAGGCTCCATGAATCCTGAATaGGATCATGGCAGCTACTGGAACCAGTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: YPYMKQGSMNPE*DHGSYWNQWPL
Trigger: CAGAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCATATATGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CCA 72 bp AAGAACTGCCAGAAACTTGTTCAGGCTTTCAGAGAATaGCAGATCATCCCAAATTTGAGGGTCACCATCCTG +
Preference number: 3 (lower is better)
Translates to: KNCQKLVQAFRE*QIIPNLRVTIL
Trigger: CAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTGAACAAGTTTCTGGCAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTGAGACAGCCTCTACTTaGTTATCTGGTTGTGACTCC +
Preference number: 3 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIETAST*LSGCDS
Trigger: GGAGTCACAACCAGATAACAAAGTAGAGGCTGTCTC...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAATTATCCCATGAATTCTaGTTTGGTGGAACCCTGAAA +
Preference number: 3 (lower is better)
Translates to: SGDQALRVSHTEGGPFSELSHEF*FGGTLK
Trigger: TTTCAGGGTTCCACCAAACAAGAATTCATGGGATAA...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTGGGCTGGCTTGCTGTTaGTCATTTTCAGGGAAAATC +
Preference number: 3 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIGLACC*SFSGKI
Trigger: GATTTTCCCTGAAAATGACAAACAGCAAGCCAGCCC...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR TCA 72 bp TTTTTATCCATATATGAAACAAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTACTGGAACCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: FLSIYETRLHES*MGSWQLLEPVA
Trigger: GGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCATATATGGATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 72 bp ATTACTTGTGATGATCTTAAAGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTCTGGGGAGTCACAGAT +
Preference number: 3 (lower is better)
Translates to: ITCDDLKAIGGV*RAPVVLWGVTD
Trigger: ATCTGTGACTCCCCAGAGAACTACTGGAGCCCTGCATACACCACCTATAGCTTTAAGATCATCACAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAAAAGGAAGTCATCTTaGCTACAGTTTGCTTTGACT +
Preference number: 3 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEKRKSS*LQFALT
Trigger: AGTCAAAGCAAACTGTAGCAAAGATGACTTCCTTTT...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACACCCTGAAATTGGAGTaGACTGTGAACATGGAACAA +
Preference number: 3 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDTLKLE*TVNMEQ
Trigger: TTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGT...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGAAAAGTCTGCAAAAGTaGATGGAAGTAGTCAATGAC +
Preference number: 3 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKKSLQK*MEVVND
Trigger: GTCATTGACTACTTCCATCAACTTTTGCAGACTTTT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 72 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTaGCTGGGTTACAGCAATCTCACTTTCAAGAACTGC +
Preference number: 3 (lower is better)
Translates to: VIIYMMFPTTDI*LGYSNLTFKNC
Trigger: GCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR GCA 72 bp GGAAATGATAGGCAGCAAGGCATTTCCCTAGACCTATaGCTTGGAATCCAAGCATATCTGAAGGAAATATTT +
Preference number: 3 (lower is better)
Translates to: GNDRQQGISLDL*LGIQAYLKEIF
Trigger: AAATATTTCCTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCTATCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTATGGCTGCCAGAATTTaGAAAAAGTATCCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFMAARI*KKYPCC
Trigger: GCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCAT...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTTGTAAAACTGTCATCTaGGTTCTTGGACCACCTACA +
Preference number: 3 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFCKTVI*VLGPPT
Trigger: TGTAGGTGGTCCAAGAACCAAGATGACAGTTTTACA...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR-3UTR CAA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCAAAAGTCTGCAAAAGTaGATGGAAGTAGTCAATGAC +
Preference number: 3 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCKSLQK*MEVVND
Trigger: GTCATTGACTACTTCCATCAACTTTTGCAGACTTTT...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAPGDAQ*LGPAEL
Trigger: GAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGG...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKPGDAQ*LGPAEL
Trigger: GAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNPGDAQ*LGPAEL
Trigger: GAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGG...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGACAGAGCAAGACCCTaGGGGAGAAGACCAGGAACG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVDRARP*GRRPGT
Trigger: CGTTCCTGGTCTTCTCCCCCAGGGTCTTGCTCTGTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCGAGCAAGACCCTATCTaGGGGAGAAGACCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAEQDPI*GRRPGT
Trigger: CGTTCCTGGTCTTCTCCCCCAGATAGGGTCTTGCTC...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525388.5
3UTR CAA 72 bp GTTCAGGCTTTCAGAGAATGGCAGATCATCCCAAATTaGAGGGTCACCATCCTGGGAACTGCTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VQAFREWQIIPN*RVTILGTAGCL
Trigger: GAGACAGCCAGCAGTTCCCAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCACCATCCTGGGAACTaGTGGCTGTCTCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVHHPGN*WLSLQV
Trigger: GACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVSYWNQ*PLQWRW
Trigger: CCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCSYWNQ*PLQWRW
Trigger: CCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGATCATGGCAGCTACTaGAACCAGTGGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCDHGSY*NQWPLQ
Trigger: TTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGGATCATGGCAGCTACTaGAACCAGTGGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKDHGSY*NQWPLQ
Trigger: TTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATC...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCRLHES*MGSWQL
Trigger: TAGCTGCCATGATCCCATTCAGGATTCATGGAGCCT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCACCATCCTGGGAACTaGTGGCTGTCTCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKHHPGN*WLSLQV
Trigger: GACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCAIGGV*RAPVVL
Trigger: GAGAACTACTGGAGCCCTGCATACACCACCTATAGC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVAIGGV*RAPVVL
Trigger: GAGAACTACTGGAGCCCTGCATACACCACCTATAGC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCAGCTTGGGCTGGCTTaGTGTTTGTCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVQLGLA*CLSFSG
Trigger: CCCTGAAAATGACAAACAGCAAGCCAGCCCAAGCTG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTGACAGAGCAAGACCCTaGGGGAGAAGACCAGGAACG +
Preference number: 4 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIDRARP*GRRPGT
Trigger: CGTTCCTGGTCTTCTCCCCCAGGGTCTTGCTCTGTC...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGAAGTTACTGGCATCTaGACCTTGTCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVEVTGI*TLSRLV
Trigger: AACCAACCTGGACAAGGTTCAGATGCCAGTAACTTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGGAAGTTACTGGCATCTaGACCTTGTCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKEVTGI*TLSRLV
Trigger: AACCAACCTGGACAAGGTTCAGATGCCAGTAACTTC...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKRLHES*MGSWQL
Trigger: TAGCTGCCATGATCCCATTCAGGATTCATGGAGCCT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCATGCAGATCTCTTCTaGAGGCTAGTTGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVHADLF*RLVGVS
Trigger: AGATACCCCAACTAGCCTTCAGAAGAGATCTGCATG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGCTGTCTCTTCAAGTCTaGGTAACGAAGGTGGACAAC +
Preference number: 4 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKLSLQV*VTKVDN
Trigger: GTTGTCCACCTTCGTTACTCAGACTTGAAGAGACAG...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCTGTCTCTTCAAGTCTaGGTAACGAAGGTGGACAAC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVLSLQV*VTKVDN
Trigger: GTTGTCCACCTTCGTTACTCAGACTTGAAGAGACAG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAGATCATCCCAAATTTaGGGGTCACCATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVRSSQI*GSPSWE
Trigger: TTCCCAGGATGGTGACCCTCAAATTTGGGATGATCT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGATGTTTCCTACTACTaGCATCTGCCTGGGTTACAG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCDVSYY*HLPGLQ
Trigger: CTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGGATGTTTCCTACTACTaGCATCTGCCTGGGTTACAG +
Preference number: 4 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKDVSYY*HLPGLQ
Trigger: CTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATC...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGATGTTTCCTACTACTaGCATCTGCCTGGGTTACAG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVDVSYY*HLPGLQ
Trigger: CTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAATGCTTTCCGTACCCCTaGAGGCAAACATTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SGDQALRVSHTEGGPFSECFPYP*RQTFPN
Trigger: GTTTGGAAATGTTTGCCTTCAGGGGTACGGAAAGCA...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATGACTGCTGTGAACTaGACTCAGCTCCTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVMTAVN*TQLLSL
Trigger: CAAGCTAAGGAGCTGAGTGCAGTTCACAGCAGTCAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCGAAGGTGGACAACATaGAGATCTCTTCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCRRWTT*RSLLKA
Trigger: AGCCTTCAGAAGAGATCTGCATGTTGTCCACCTTCG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCCTACTACTGACATCTaGCTGGGTTACAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVPTTDI*LGYSNL
Trigger: GAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCAGCTTGGGCTGGCTTaGTGTTTGTCATTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKQLGLA*CLSFSG
Trigger: CCCTGAAAATGACAAACAGCAAGCCAGCCCAAGCTG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCCATGAATCCTGAATaGGATCATGGCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCSMNPE*DHGSYW
Trigger: CCAGTAGCTGCCATGATCCCATTCAGGATTCATGGA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTCCATGAATCCTGAATaGGATCATGGCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVSMNPE*DHGSYW
Trigger: CCAGTAGCTGCCATGATCCCATTCAGGATTCATGGA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCCTTGCTGCAGGACTTaGAAAAATCAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCPCCRT*KNQKCC
Trigger: ACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCCTTGCTGCAGGACTTaGAAAAATCAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVPCCRT*KNQKCC
Trigger: ACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGTGAAACAATGCAAGTaGATTCAAGTGATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVVKQCK*IQVMAA
Trigger: GGCAGCCATCACTTGAATTCACTTGCATTGTTTCAC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGGATTTTGTATTACTTaGCTCAAGGGGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVGFCIT*LKGLSH
Trigger: ATGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCTGTCTCTTCAAGTCTaGGTAACGAAGGTGGACAAC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLSLQV*VTKVDN
Trigger: GTTGTCCACCTTCGTTACTCAGACTTGAAGAGACAG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTACTCTCCCTGTGTGGTaGGATTCTGATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCTLPVW*DSDSLL
Trigger: AAGAAGACTATCAGAATCTCACCACACAGGGAGAGT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCAGACTCTGAAGGGTaGCTTTCTGCCAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCSDSEG*LSAKDV
Trigger: AACATCTTTGGCAGAAAGTCACCCTTCAGAGTCTGA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTCAGACTCTGAAGGGTaGCTTTCTGCCAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVSDSEG*LSAKDV
Trigger: AACATCTTTGGCAGAAAGTCACCCTTCAGAGTCTGA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGGTGCTGCTAAGACTTaGATGTCTGGACATTTGGAA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCGAAKT*MSGHLE
Trigger: TTCCAAATGTCCAGACATTCAAGTCTTAGCAGCACC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AGACTAGAATGGTCACTCTCCCTGTGTGGTGAGATTCTGATAGTCTTCTTAAGACACCATCCTGGGAACTaGTGGCTGTCTCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: RLEWSLSLCGEILIVFLRHHPGN*WLSLQV
Trigger: GACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTG...TCTTAAGAAGACTATCAGAATCTCACCACACAGGGAGAGTGACCATTCTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCCTACTACTGACATCTaGCTGGGTTACAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKPTTDI*LGYSNL
Trigger: GAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCGCTGTAAGAAGTTACTaGCATCTGAACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAAVRSY*HLNLVQ
Trigger: CTGGACAAGGTTCAGATGCCAGTAACTTCTTACAGC...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGCTGTAAGAAGTTACTaGCATCTGAACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCAVRSY*HLNLVQ
Trigger: CTGGACAAGGTTCAGATGCCAGTAACTTCTTACAGC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCTGTAAGAAGTTACTaGCATCTGAACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVAVRSY*HLNLVQ
Trigger: CTGGACAAGGTTCAGATGCCAGTAACTTCTTACAGC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTCTGGTAGAACAATCTaGCAAGCCACTAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVSGRTI*QATSAL
Trigger: CAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCTCTGGTAGAACAATCTaGCAAGCCACTAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQASGRTI*QATSAL
Trigger: CAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGA...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCTACTGACATCTGCCTaGGTTACAGCAATCTCACTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVLLTSA*VTAISL
Trigger: AAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCTACTGACATCTGCCTaGGTTACAGCAATCTCACTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCLLTSA*VTAISL
Trigger: AAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTTGGACAGCTTGGGCTaGCTTGCTGTTTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVLDSLG*LAVCHF
Trigger: AAAATGACAAACAGCAAGCCAGCCCAAGCTGTCCAA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCATGTGTTCACACCGTaGTCTGTAATACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKHVFTP*SVIPAA
Trigger: AGCAGCTGGTATTACAGACCACGGTGTGAACACATG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCCTTGCTGCAGGACTTaGAAAAATCAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKPCCRT*KNQKCC
Trigger: ACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGGCTGCCAGAATTTTaGAAAAGTATCCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCWLPEF*KSILAA
Trigger: TGCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGTGAAACAATGCAAGTaGATTCAAGTGATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKVKQCK*IQVMAA
Trigger: GGCAGCCATCACTTGAATTCACTTGCATTGTTTCAC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTAGGCTCCATGAATCCTaGATGGGATCATGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIRLHES*MGSWQL
Trigger: TAGCTGCCATGATCCCATTCAGGATTCATGGAGCCT...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGGATTTTGTATTACTTaGCTCAAGGGGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKGFCIT*LKGLSH
Trigger: ATGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGACTCTCCCTGTGTGGTaGGATTCTGATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKTLPVW*DSDSLL
Trigger: AAGAAGACTATCAGAATCTCACCACACAGGGAGAGT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCTTTGTGAAGGCTGGATaGAGTCTTCAGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAFVKAG*SLQKVI
Trigger: GATCACTTTCTGAAGACTTCATCCAGCCTTCACAAA...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCTCTGTTTATCCCATaGATTCTTGTTTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVALFIP*ILVWWN
Trigger: GTTCCACCAAACAAGAATTCATGGGATAAACAGAGC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGCTCTGTTTATCCCATaGATTCTTGTTTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCALFIP*ILVWWN
Trigger: GTTCCACCAAACAAGAATTCATGGGATAAACAGAGC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGAAAACGTCTGGTTGTaGAACACCAGATACAATAGG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVENVWL*NTRYNR
Trigger: CCTATTGTATCTGGTGTTTCACAACCAGACGTTTTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCAACATTTGACTTCTaGACAAGAATCAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVATFDF*TRIRSK
Trigger: CTTGGACCTGATTCTTGTTCAGAAGTCAAATGTTGC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAGGTGGGCCTTTTTCTaGAAATGGAAGGCAACATTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVRWAFF*KWKATF
Trigger: AAATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAGGTGGGCCTTTTTCTaGAAATGGAAGGCAACATTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCRWAFF*KWKATF
Trigger: AAATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTGTGGTCAGAGCATTaGTGTAAGAAGTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCLWSEH*CKKLLA
Trigger: TGCCAGTAACTTCTTACAGCAATGCTCTGACCACAA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCTTGTGGTCAGAGCATTaGTGTAAGAAGTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQALWSEH*CKKLLA
Trigger: TGCCAGTAACTTCTTACAGCAATGCTCTGACCACAA...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR GCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAATTGTGGTCAGAGCATTaGTGTAAGAAGTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SGDQALRVSHTEGGPFSELWSEH*CKKLLA
Trigger: TGCCAGTAACTTCTTACAGCAATGCTCTGACCACAA...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCAATTTCATGATGACTaGTGTGAACTGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVQFHDD*CELHSA
Trigger: AGCTGAGTGCAGTTCACAGCAGTCATCATGAAATTG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGAGCATGTTCTTGAATaGCTAGAGTCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVEHVLE*LESDRL
Trigger: AAGCCTATCTGACTCTAGGCATTCAAGAACATGCTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGAGCATGTTCTTGAATaGCTAGAGTCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCEHVLE*LESDRL
Trigger: AAGCCTATCTGACTCTAGGCATTCAAGAACATGCTC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGCTGTAAGAAGTTACTaGCATCTGAACCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKAVRSY*HLNLVQ
Trigger: CTGGACAAGGTTCAGATGCCAGTAACTTCTTACAGC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCAGGCTTTCAGAGAATaGCAGATCATCCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCQAFRE*QIIPNL
Trigger: CAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCAGGCTTTCAGAGAATaGCAGATCATCCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVQAFRE*QIIPNL
Trigger: CAAATTTGGGATGATCTGCCATTCTCTGAAAGCCTG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCTACTGACATCTGCCTaGGTTACAGCAATCTCACTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLLTSA*VTAISL
Trigger: AAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTTGGACAGCTTGGGCTaGCTTGCTGTTTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLDSLG*LAVCHF
Trigger: AAAATGACAAACAGCAAGCCAGCCCAAGCTGTCCAA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCCTAGACCTATGCCTTaGAATCCAAGCATATCTGAA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCPRPMP*NPSISE
Trigger: TTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACGGATTTTGTATTACTTaGCTCAAGGGGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDGFCIT*LKGLSH
Trigger: ATGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCC...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGCATGCAGATCTCTTCTaGAGGCTAGTTGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKHADLF*RLVGVS
Trigger: AGATACCCCAACTAGCCTTCAGAAGAGATCTGCATG...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTTTGTTATCTGGTTGTaGCTCCTTTTCAACACTAGG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVFVIWL*LLFNTR
Trigger: CCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTTGTTATCTGGTTGTaGCTCCTTTTCAACACTAGG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCFVIWL*LLFNTR
Trigger: CCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGTGTTACGTTGTTATTaGTATGTCCCCAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCVLRCY*YVPKAF
Trigger: AAATGCCTTGGGGACATATCAATAACAACGTAACAC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTTTGTGAAGGCTGGATaGAGTCTTCAGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKFVKAG*SLQKVI
Trigger: GATCACTTTCTGAAGACTTCATCCAGCCTTCACAAA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGCAACATTTGACTTCTaGACAAGAATCAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKATFDF*TRIRSK
Trigger: CTTGGACCTGATTCTTGTTCAGAAGTCAAATGTTGC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATGGAAGGCAACATTTaGCTTCTGAACAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVMEGNI*LLNKNQ
Trigger: CTGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTTGTGGTCAGAGCATTaGTGTAAGAAGTTACTGGCA +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLWSEH*CKKLLA
Trigger: TGCCAGTAACTTCTTACAGCAATGCTCTGACCACAA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCAATTTCATGATGACTaGTGTGAACTGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKQFHDD*CELHSA
Trigger: AGCTGAGTGCAGTTCACAGCAGTCATCATGAAATTG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGAGTCACAGATAACCTaGTGTGGTCTGCATGAAATT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKESQIT*CGLHEI
Trigger: AATTTCATGCAGACCACAGCAGGTTATCTGTGACTC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATGCTATAGGTGGTGTATaGAGGGCTCCAGTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNAIGGV*RAPVVL
Trigger: GAGAACTACTGGAGCCCTGCATACACCACCTATAGC...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATTTCCCTAGACCTATaGCTTGGAATCCAAGCATAT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVISLDL*LGIQAY
Trigger: ATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCATGTGTTCACACCGTaGTCTGCAAAACAAAATAGC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKHVFTP*SAKQNS
Trigger: GCTATTTTGTTTTGCAGACCACGGTGTGAACACATG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329143.4
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGAACCTTGTCCAGGTTaGTTTTCAAAATTCGTCACT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVEPCPG*FSKFVT
Trigger: AGTGACGAATTTTGAAAACCAACCTGGACAAGGTTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCATGGTAGCTCATGCTaGGACCTATTTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCHGSSC*DLFLIS
Trigger: GGAAATTAAAAATAGGTCCCAGCATGAGCTACCATG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAACATGGTAGCTCATGCTaGGACCTATTTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEHGSSC*DLFLIS
Trigger: GGAAATTAAAAATAGGTCCCAGCATGAGCTACCATG...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTATTTAGACTAGAATaGTCACTCTCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCLFRLE*SLSLCG
Trigger: ACCACACAGGGAGAGTGACCATTCTAGTCTAAATAA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTTATTTAGACTAGAATaGTCACTCTCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVLFRLE*SLSLCG
Trigger: ACCACACAGGGAGAGTGACCATTCTAGTCTAAATAA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGTAAAACTGTCATCTTaGTTCTTGGACCACCTACAA +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVVKLSS*FLDHLQ
Trigger: TTGTAGGTGGTCCAAGAACCAAGATGACAGTTTTAC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGGTAAAACTGTCATCTTaGTTCTTGGACCACCTACAA +
Preference number: 4 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKVKLSS*FLDHLQ
Trigger: TTGTAGGTGGTCCAAGAACCAAGATGACAGTTTTAC...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp ACTACTGACATCTGCCTGGGTTACAGCAATCTCACTTTCAAGAACTGCCAGAAATTGGACAGCTTGGGCTaGCTTGCTGTTTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: TTDICLGYSNLTFKNCQKLDSLG*LAVCHF
Trigger: AAAATGACAAACAGCAAGCCAGCCCAAGCTGTCCAA...TTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCCTAGACCTATGCCTTaGAATCCAAGCATATCTGAA +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKPRPMP*NPSISE
Trigger: TTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGAATGTCTGGACATTTaGAAATCCAGCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCECLDI*KSSLNF
Trigger: AAAGTTCAGGCTGGATTTCCAAATGTCCAGACATTC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTCATGTGTTCACACCGTaGTCTGTAATACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIHVFTP*SVIPAA
Trigger: AGCAGCTGGTATTACAGACCACGGTGTGAACACATG...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTATTTTATTAGGATCCTaGATGTACCTGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCILLGS*MYLCKP
Trigger: TGGTTTGCACAGGTACATTCAGGATCCTAATAAAAT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGATTTCCTTTACAGTTaGAAAGGAAGTCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCDFLYS*KGSHLC
Trigger: GCAAAGATGACTTCCTTTTCAACTGTAAAGGAAATC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTATATCTCTTCCATTATaGTTTACAGAGACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCISLPL*FTETAS
Trigger: AGAGGCTGTCTCTGTAAATCATAATGGAAGAGATAT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGTGTTACGTTGTTATTaGTATGTCCCCAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKVLRCY*YVPKAF
Trigger: AAATGCCTTGGGGACATATCAATAACAACGTAACAC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTGGTGCTGCTAAGACTTaGATGTCTGGACATTTGGAA +
Preference number: 4 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIGAAKT*MSGHLE
Trigger: TTCCAAATGTCCAGACATTCAAGTCTTAGCAGCACC...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGATGGAAGGCAACATTTaGCTTCTGAACAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKMEGNI*LLNKNQ
Trigger: CTGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCAT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp ACTACTGACATCTGCCTGGGTTACAGCAATCTCACTTTCAAGAACTGCCAGAAAGAGTCACAGATAACCTaGTGTGGTCTGCATGAAATT +
Preference number: 4 (lower is better)
Translates to: TTDICLGYSNLTFKNCQKESQIT*CGLHEI
Trigger: AATTTCATGCAGACCACAGCAGGTTATCTGTGACTC...TTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGTCCTGTTTTCAATTTaGTTCTCTCCAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCVLFSI*FSPSVQ
Trigger: TTGAACACTTGGAGAGAAGCAAATTGAAAACAGGAC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGTCCTGTTTTCAATTTaGTTCTCTCCAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVVLFSI*FSPSVQ
Trigger: TTGAACACTTGGAGAGAAGCAAATTGAAAACAGGAC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATAAAACTTGAATTCTaGAGAGCAAGTACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVIKLEF*RASTEA
Trigger: AGCCTCAGTACTTGCTCTCCAGAATTCAAGTTTTAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCATAAAACTTGAATTCTaGAGAGCAAGTACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAIKLEF*RASTEA
Trigger: AGCCTCAGTACTTGCTCTCCAGAATTCAAGTTTTAT...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAGTAGAGCCACATTTTaGACAATTAGACCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCSRATF*TIRPFG
Trigger: TCCAAAAGGTCTAATTGTCCAAAATGTGGCTCTACT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGTTTGTATCTGTAATTaGCATTTCCAGATTCACCAG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVVCICN*HFQIHQ
Trigger: CTGGTGAATCTGGAAATGCCAATTACAGATACAAAC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCGTTTGTATCTGTAATTaGCATTTCCAGATTCACCAG +
Preference number: 4 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAVCICN*HFQIHQ
Trigger: CTGGTGAATCTGGAAATGCCAATTACAGATACAAAC...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525388.5
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGTTTGTATCTGTAATTaGCATTTCCAGATTCACCAG +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCVCICN*HFQIHQ
Trigger: CTGGTGAATCTGGAAATGCCAATTACAGATACAAAC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGAACCTTGTCCAGGTTaGTTTTCAAAATTCGTCACT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKEPCPG*FSKFVT
Trigger: AGTGACGAATTTTGAAAACCAACCTGGACAAGGTTC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCAGCTACTGGAACCAGTaGCCTCTGCAATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCSYWNQ*PLQWRW
Trigger: CCATCTCCATTGCAGAGGCCACTGGTTCCAGTAGCT...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCGATCATGGCAGCTACTaGAACCAGTGGCCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCDHGSY*NQWPLQ
Trigger: TTGCAGAGGCCACTGGTTCCAGTAGCTGCCATGATC...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCATGGTAGCTCATGCTaGGACCTATTTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKHGSSC*DLFLIS
Trigger: GGAAATTAAAAATAGGTCCCAGCATGAGCTACCATG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTGTCATCTTGGTTCTTaGACCACCTACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVCHLGS*TTYNIV
Trigger: AACAATATTGTAGGTGGTCCAAGAACCAAGATGACA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGTAAAACTGTCATCTTaGTTCTTGGACCACCTACAA +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKVKLSS*FLDHLQ
Trigger: TTGTAGGTGGTCCAAGAACCAAGATGACAGTTTTAC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR TCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGATTTTATTAGGATCCTaGATGTACCTGTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKILLGS*MYLCKP
Trigger: TGGTTTGCACAGGTACATTCAGGATCCTAATAAAAT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR TCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATACTCTCCCTGTGTGGTaGGATTCTGATAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNTLPVW*DSDSLL
Trigger: AAGAAGACTATCAGAATCTCACCACACAGGGAGAGT...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp CAGAAAGTGATCTCAGTGAAAAATCAGACTCTGAAGGGTGACTTTCTGCCAAAGGCTCTGTTTATCCCATaGATTCTTGTTTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QKVISVKNQTLKGDFLPKALFIP*ILVWWN
Trigger: GTTCCACCAAACAAGAATTCATGGGATAAACAGAGC...CTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAAACATGGTAGCTCATaGTGGGACCTATTTTTAATT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCKHGSS*WDLFLI
Trigger: AATTAAAAATAGGTCCCAGCATGAGCTACCATGTTT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTCGAAGGTGGACAACATaGAGATCTCTTCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFRRWTT*RSLLKA
Trigger: AGCCTTCAGAAGAGATCTGCATGTTGTCCACCTTCG...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTCCTACTACTGACATCTaGCTGGGTTACAGCAATCTC +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFPTTDI*LGYSNL
Trigger: GAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGG...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACATTTCCCTAGACCTATaGCTTGGAATCCAAGCATAT +
Preference number: 4 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDISLDL*LGIQAY
Trigger: ATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAAT...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATTGTCCAGTGTTTCTaGAATTTTATTAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVIVQCF*NFIRIL
Trigger: CAGGATCCTAATAAAATTCCAGAAACACTGGACAAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329143.4
ENST00000533655.6
CDS-3UTR CCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTTCCATGAATCCTGAATaGGATCATGGCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFSMNPE*DHGSYW
Trigger: CCAGTAGCTGCCATGATCCCATTCAGGATTCATGGA...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATTTCCACTGCACTGTaGAAGGATTTTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVISTAL*KDFVLL
Trigger: AAGTAATACAAAATCCTTCCACAGTGCAGTGGAAAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTATTTCCACTGCACTGTaGAAGGATTTTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCISTAL*KDFVLL
Trigger: AAGTAATACAAAATCCTTCCACAGTGCAGTGGAAAT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCATCTTGGTTCTTaGACCACCTACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKCHLGS*TTYNIV
Trigger: AACAATATTGTAGGTGGTCCAAGAACCAAGATGACA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAATTTTTGTGAAGGCTaGATGAAGTCTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCNFCEG*MKSSES
Trigger: ACTTTCTGAAGACTTCATCCAGCCTTCACAAAAATT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAATTTTTGTGAAGGCTaGATGAAGTCTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVNFCEG*MKSSES
Trigger: ACTTTCTGAAGACTTCATCCAGCCTTCACAAAAATT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TTGGTAACTCTTGTTGATCAGGGAAATGATAGGCAGCAAGGCATTTCCCTAGACGAATGTCTGGACATTTaGAAATCCAGCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: LVTLVDQGNDRQQGISLDECLDI*KSSLNF
Trigger: AAAGTTCAGGCTGGATTTCCAAATGTCCAGACATTC...GTCTAGGGAAATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCGAAGTTACTGGCATCTaGACCTTGTCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCEVTGI*TLSRLV
Trigger: AACCAACCTGGACAAGGTTCAGATGCCAGTAACTTC...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCAAGATCATCCCAAATTTaGGGGTCACCATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TFITNRIALCYVVIDMSPRSSQI*GSPSWE
Trigger: TTCCCAGGATGGTGACCCTCAAATTTGGGATGATCT...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGAAACATGGTAGCTCATaGTGGGACCTATTTTTAATT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKKHGSS*WDLFLI
Trigger: AATTAAAAATAGGTCCCAGCATGAGCTACCATGTTT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR GCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATGAGCATGTTCTTGAATaGCTAGAGTCAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNEHVLE*LESDRL
Trigger: AAGCCTATCTGACTCTAGGCATTCAAGAACATGCTC...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp ACTACTGACATCTGCCTGGGTTACAGCAATCTCACTTTCAAGAACTGCCAGAAAGTCCTGTTTTCAATTTaGTTCTCTCCAAGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TTDICLGYSNLTFKNCQKVLFSI*FSPSVQ
Trigger: TTGAACACTTGGAGAGAAGCAAATTGAAAACAGGAC...TTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGATTTCCACTGCACTGTaGAAGGATTTTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKISTAL*KDFVLL
Trigger: AAGTAATACAAAATCCTTCCACAGTGCAGTGGAAAT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCCATGTGTTCACACCGTaGTCTGTAATACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCHVFTP*SVIPAA
Trigger: AGCAGCTGGTATTACAGACCACGGTGTGAACACATG...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCCCTTGCTGCAGGACTTaGAAAAATCAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCPCCRT*KNQKCC
Trigger: ACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGG...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCGTGAAACAATGCAAGTaGATTCAAGTGATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCVKQCK*IQVMAA
Trigger: GGCAGCCATCACTTGAATTCACTTGCATTGTTTCAC...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR TCA 90 bp AGACTAGAATGGTCACTCTCCCTGTGTGGTGAGATTCTGATAGTCTTCTTAAGAGATTTCCTTTACAGTTaGAAAGGAAGTCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: RLEWSLSLCGEILIVFLRDFLYS*KGSHLC
Trigger: GCAAAGATGACTTCCTTTTCAACTGTAAAGGAAATC...TCTTAAGAAGACTATCAGAATCTCACCACACAGGGAGAGTGACCATTCTAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATGTGTTACGTTGTTATTaGTATGTCCCCAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNVLRCY*YVPKAF
Trigger: AAATGCCTTGGGGACATATCAATAACAACGTAACAC...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCATCAGACTCTGAAGGGTaGCTTTCTGCCAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: TFITNRIALCYVVIDMSPSDSEG*LSAKDV
Trigger: AACATCTTTGGCAGAAAGTCACCCTTCAGAGTCTGA...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTGAAAACGTCTGGTTGTaGAACACCAGATACAATAGG +
Preference number: 4 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFENVWL*NTRYNR
Trigger: CCTATTGTATCTGGTGTTTCACAACCAGACGTTTTC...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTAGGTGGGCCTTTTTCTaGAAATGGAAGGCAACATTT +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFRWAFF*KWKATF
Trigger: AAATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCT...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTCAATTTCATGATGACTaGTGTGAACTGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFQFHDD*CELHSA
Trigger: AGCTGAGTGCAGTTCACAGCAGTCATCATGAAATTG...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp TTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAAATGGAAGGCAACATTATAAAACTTGAATTCTaGAGAGCAAGTACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FEFHTLKVGLFLKMEGNIIKLEF*RASTEA
Trigger: AGCCTCAGTACTTGCTCTCCAGAATTCAAGTTTTAT...AATGTTGCCTTCCATTTTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CAA 72 bp TTATCCCATGAATTCTTGTTTGGTGGAACCCTGAAATaGGAGTTGACTGTGAACATGGAACAAAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LSHEFLFGGTLK*ELTVNMEQSLD
Trigger: GTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCCACCAAACAAGAATTCATGGGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCTGGCTGCCAGAATTTTaGAAAAGTATCCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCWLPEF*KSILAA
Trigger: TGCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCA...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTTTATTTAGACTAGAATaGTCACTCTCCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFLFRLE*SLSLCG
Trigger: ACCACACAGGGAGAGTGACCATTCTAGTCTAAATAA...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCCCTAGACCTATGCCTTaGAATCCAAGCATATCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCPRPMP*NPSISE
Trigger: TTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGG...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCATTTGTTATCTGGTTGTaGCTCCTTTTCAACACTAGG +
Preference number: 4 (lower is better)
Translates to: TFITNRIALCYVVIDMSPFVIWL*LLFNTR
Trigger: CCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAA...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR TCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTATATCTCTTCCATTATaGTTTACAGAGACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFISLPL*FTETAS
Trigger: AGAGGCTGTCTCTGTAAATCATAATGGAAGAGATAT...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CCA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTTGTCATCTTGGTTCTTaGACCACCTACAATATTGTT +
Preference number: 4 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFCHLGS*TTYNIV
Trigger: AACAATATTGTAGGTGGTCCAAGAACCAAGATGACA...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
3UTR CAA 72 bp CATGAATTCTTGTTTGGTGGAACCCTGAAATTGGAGTaGACTGTGAACATGGAACAAAGTCTTGACTATTTT +
Preference number: 4 (lower is better)
Translates to: HEFLFGGTLKLE*TVNMEQSLDYF
Trigger: AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCCACCAAACAAGAATTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCGTTTTCAAAATTCTGTaGAAACCAGTGGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCVFKIL*KPVAVR
Trigger: TCTTACTGCCACTGGTTTGCACAGAATTTTGAAAAC...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525388.5
CDS-3UTR CCA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTAATTTTTGTGAAGGCTaGATGAAGTCTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFNFCEG*MKSSES
Trigger: ACTTTCTGAAGACTTCATCCAGCCTTCACAAAAATT...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR GCA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCAAACATGGTAGCTCATaGTGGGACCTATTTTTAATT +
Preference number: 4 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCKHGSS*WDLFLI
Trigger: AATTAAAAATAGGTCCCAGCATGAGCTACCATGTTT...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS TCA 90 bp AGACCCTGGGGGAGAAGACCAGGAACGGGCCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTCAGTAGCACGCCGGCAGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RPWGRRPGTGPGDAQ*LGPAELSSTPAAFQ
Trigger: TTGGAAGGCTGCCGGCGTGCTACTGAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGGGCCCGTTCCTGGTCTTCTCCCCCAGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000524921.5
ENST00000525361.5
ENST00000528189.5
ENST00000528759.5
ENST00000532277.5
ENST00000532764.5
ENST00000533655.6
CDS TCA 90 bp GTGGTCTGGGGGAGAAGACCAGGAACGGGCCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTCAGTAGCACGCCGGCAGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VVWGRRPGTGPGDAQ*LGPAELSSTPAAFQ
Trigger: TTGGAAGGCTGCCGGCGTGCTACTGAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGGGCCCGTTCCTGGTCTTCTCCCCCAGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532589.5
CDS CCA 90 bp TGGAGCTTCGCTGAGCCTCCTGGGCGTAGGGTTCCCGGGAAAGTGTaGAGTGAGCCGCAGCGCCCTGGGGTCTGGCGGGGTGACTCGAAA +
Preference number: 5 (lower is better)
Translates to: WSFAEPPGRRVPGKV*SEPQRPGVWRGDSK
Trigger: TTTCGAGTCACCCCGCCAGACCCCAGGGCGCTGCGGCTCACTCCACACTTTCCCGGGAACCCTACGCCCAGGAGGCTCAGCGAAGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS TCA 90 bp TCGAATCTCCCGCGTCCTTTTCCGCCGGAAGTAACGCTTTGGCTCTaGTTACTCAGAGCCAATCAGAAGAAGGCGCCGCAGAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SNLPRPFPPEVTLWL*LLRANQKKAPQRVE
Trigger: CTCCACCCTCTGCGGCGCCTTCTTCTGATTGGCTCTGAGTAATCAGAGCCAAAGCGTTACTTCCGGCGGAAAAGGACGCGGGAGATTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS CCA 90 bp GGCTCTGATTACTCAGAGCCAATCAGAAGAAGGCGCCGCAGAGGGTaGAGCTTAGCGAGGAAATCCTACAAGCATCTGGAAACGACCATT +
Preference number: 5 (lower is better)
Translates to: GSDYSEPIRRRRRRG*SLARKSYKHLETTI
Trigger: AATGGTCGTTTCCAGATGCTTGTAGGATTTCCTCGCTAAGCTCCACCCTCTGCGGCGCCTTCTTCTGATTGGCTCTGAGTAATCAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCAGATCATCCCAAATTaGAGGGTCACCATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVQIIPN*RVTILG
Trigger: TCCCAGGATGGTGACCCTCAAATTTGGGATGATCTG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTACAGCTTGGGCTGGCTaGCTGTTTGTCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCTAWAG*LFVIFR
Trigger: CCTGAAAATGACAAACAGCAAGCCAGCCCAAGCTGT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCAGATCATCCCAAATTaGAGGGTCACCATCCTGGGA +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKQIIPN*RVTILG
Trigger: TCCCAGGATGGTGACCCTCAAATTTGGGATGATCTG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAGAGACAGCCTCTACTTaGTTATCTGGTTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEETAST*LSGCDS
Trigger: GGAGTCACAACCAGATAACAAAGTAGAGGCTGTCTC...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGAGACAGCCTCTACTTaGTTATCTGGTTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVETAST*LSGCDS
Trigger: GGAGTCACAACCAGATAACAAAGTAGAGGCTGTCTC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGGTGGAACCCTGAAATaGGAGTTGACTGTGAACATG +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVGGTLK*ELTVNM
Trigger: CATGTTCACAGTCAACTCCAATTTCAGGGTTCCACC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGGGCTGGCTTGCTGTTaGTCATTTTCAGGGAAAATC +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCGLACC*SFSGKI
Trigger: GATTTTCCCTGAAAATGACAAACAGCAAGCCAGCCC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGGGCTGGCTTGCTGTTaGTCATTTTCAGGGAAAATC +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVGLACC*SFSGKI
Trigger: GATTTTCCCTGAAAATGACAAACAGCAAGCCAGCCC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGCTTTGGCTTTTCTTTaGTGGTCAGAGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVALAFL*WSEHCC
Trigger: ACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGC...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCGCTTTGGCTTTTCTTTaGTGGTCAGAGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAALAFL*WSEHCC
Trigger: ACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGC...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGCTTTGGCTTTTCTTTaGTGGTCAGAGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCALAFL*WSEHCC
Trigger: ACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCAAGCCACTAGTGCTTaGGCTTTTCTTTTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCQATSA*AFLLWS
Trigger: TGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAGGATTTTGTATTACTaGACTCAAGGGGCTCTCGCA +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCRILYY*TQGALA
Trigger: TGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCCT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAGGATTTTGTATTACTaGACTCAAGGGGCTCTCGCA +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVRILYY*TQGALA
Trigger: TGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCCT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGAGACAGCCTCTACTTaGTTATCTGGTTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKETAST*LSGCDS
Trigger: GGAGTCACAACCAGATAACAAAGTAGAGGCTGTCTC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGGGTGGAACCCTGAAATaGGAGTTGACTGTGAACATG +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKGGTLK*ELTVNM
Trigger: CATGTTCACAGTCAACTCCAATTTCAGGGTTCCACC...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS GCA 90 bp TGGCAAGCCACTAGTGCTTTGGCTTTTCTTTTGTGGTCAGAGCATTaGTGTAAGAAGTTACTGGCATCTGAACCTTGTCCAGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: WQATSALAFLLWSEH*CKKLLASEPCPGWF
Trigger: AAACCAACCTGGACAAGGTTCAGATGCCAGTAACTTCTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329143.4
ENST00000525361.5
ENST00000525388.5
ENST00000528759.5
ENST00000532764.5
ENST00000533655.6
ENST00000533750.1
CDS CCA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTaGCAAGCCACTAGTGCTTTGGCTTTTCTTTTGTGGTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: SMTVKPAIPGSGRTI*QATSALAFLLWSEH
Trigger: ATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329143.4
ENST00000525388.5
ENST00000528759.5
ENST00000533655.6
ENST00000533750.1
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTATGGCTGCCAGAATTTaGAAAAAGTATCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVMAARI*KKYPCC
Trigger: GCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCAT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCATGGCTGCCAGAATTTaGAAAAAGTATCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAMAARI*KKYPCC
Trigger: GCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCAT...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTATGGCTGCCAGAATTTaGAAAAAGTATCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCMAARI*KKYPCC
Trigger: GCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCAT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTCACTGTGGAAGGATTTaGTATTACTTGACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCHCGRI*YYLTQG
Trigger: CCCTTGAGTCAAGTAATACAAAATCCTTCCACAGTG...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCAGCAAGGCATTTCCCTAGACCTATGCCTTGGAATCCAAGCATATCTGAAGCTGTCATCTTGGTTCTaGGACCACCTACAATATTGT +
Preference number: 5 (lower is better)
Translates to: RQQGISLDLCLGIQAYLKLSSWF*DHLQYC
Trigger: ACAATATTGTAGGTGGTCCAAGAACCAAGATGACAG...CTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAAATGCCTTGCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTCTGTCATCTTGGTTCTaGGACCACCTACAATATTGT +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVLSSWF*DHLQYC
Trigger: ACAATATTGTAGGTGGTCCAAGAACCAAGATGACAG...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCTGTAAAACTGTCATCTaGGTTCTTGGACCACCTACA +
Preference number: 5 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQACKTVI*VLGPPT
Trigger: TGTAGGTGGTCCAAGAACCAAGATGACAGTTTTACA...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTGTAAAACTGTCATCTaGGTTCTTGGACCACCTACA +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVCKTVI*VLGPPT
Trigger: TGTAGGTGGTCCAAGAACCAAGATGACAGTTTTACA...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTACCCTGAAATTGGAGTaGACTGTGAACATGGAACAA +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVTLKLE*TVNMEQ
Trigger: TTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCACTGTGGAAGGATTTaGTATTACTTGACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKHCGRI*YYLTQG
Trigger: CCCTTGAGTCAAGTAATACAAAATCCTTCCACAGTG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGCTGTCATCTTGGTTCTaGGACCACCTACAATATTGT +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLSSWF*DHLQYC
Trigger: ACAATATTGTAGGTGGTCCAAGAACCAAGATGACAG...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAAAACTGTCATCTaGGTTCTTGGACCACCTACA +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKCKTVI*VLGPPT
Trigger: TGTAGGTGGTCCAAGAACCAAGATGACAGTTTTACA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTGTGTTACGTTGTTATaGATATGTCCCCAAGGCATT +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCCVTLL*ICPQGI
Trigger: AATGCCTTGGGGACATATCAATAACAACGTAACACA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGACCCTGAAATTGGAGTaGACTGTGAACATGGAACAA +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKTLKLE*TVNMEQ
Trigger: TTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTTATCCCATGAATTCTaGTTTGGTGGAACCCTGAAA +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCLSHEF*FGGTLK
Trigger: TTTCAGGGTTCCACCAAACAAGAATTCATGGGATAA...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGTGTTTTTATATTTTTaGGACAGCTTGGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCVFLYF*DSLGWL
Trigger: AAGCCAGCCCAAGCTGTCCAAAAAATATAAAAACAC...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp TCAGGTGACCAAGCACTTCGAGTTTCACACACTGAAGGTGGGCCTTTTTCTGAAGTGTTTTTATATTTTTaGGACAGCTTGGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SGDQALRVSHTEGGPFSEVFLYF*DSLGWL
Trigger: AAGCCAGCCCAAGCTGTCCAAAAAATATAAAAACAC...TTCAGAAAAAGGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp TCAATGACAGTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCAAAAGTCTGCAAAAGTaGATGGAAGTAGTCAATGAC +
Preference number: 5 (lower is better)
Translates to: SMTVKPAIPGSGRTIWQAKSLQK*MEVVND
Trigger: GTCATTGACTACTTCCATCAACTTTTGCAGACTTTT...GGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525388.5
ENST00000528759.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAAAAGTCTGCAAAAGTaGATGGAAGTAGTCAATGAC +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVKSLQK*MEVVND
Trigger: GTCATTGACTACTTCCATCAACTTTTGCAGACTTTT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAAAAGGAAGTCATCTTaGCTACAGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCKRKSS*LQFALT
Trigger: AGTCAAAGCAAACTGTAGCAAAGATGACTTCCTTTT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTGTTACGTTGTTATaGATATGTCCCCAAGGCATT +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKCVTLL*ICPQGI
Trigger: AATGCCTTGGGGACATATCAATAACAACGTAACACA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTTATCCCATGAATTCTaGTTTGGTGGAACCCTGAAA +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKLSHEF*FGGTLK
Trigger: TTTCAGGGTTCCACCAAACAAGAATTCATGGGATAA...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTACAGCTTGGGCTGGCTaGCTGTTTGTCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFTAWAG*LFVIFR
Trigger: CCTGAAAATGACAAACAGCAAGCCAGCCCAAGCTGT...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTTAATGGAAGGCAACATTaGACTTCTGAACAAGAATCA +
Preference number: 5 (lower is better)
Translates to: GTVAPSRVLFSICFSPSVNGRQH*TSEQES
Trigger: TGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCATT...AACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGTGTAATGGAAGGCAACATTaGACTTCTGAACAAGAATCA +
Preference number: 5 (lower is better)
Translates to: RHSSSQQSPVFNLLLSKCNGRQH*TSEQES
Trigger: TGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCATT...ACACTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp AAAAGGCACAGTAGCTCCCAGCAGAGTCCTGTTTTCAATTTGCTTCTCTCCAAGAAAAGGAAGTCATCTTaGCTACAGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: KRHSSSQQSPVFNLLLSKKRKSS*LQFALT
Trigger: AGTCAAAGCAAACTGTAGCAAAGATGACTTCCTTTT...CTTGGAGAGAAGCAAATTGAAAACAGGACTCTGCTGGGAGCTACTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329143.4
ENST00000528759.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTGGTGGAACCCTGAAATaGGAGTTGACTGTGAACATG +
Preference number: 5 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFGGTLK*ELTVNM
Trigger: CATGTTCACAGTCAACTCCAATTTCAGGGTTCCACC...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GCCTCTACTTTGTTATCTGGTTGTGACTCCTTTTCAACACTAGGACTTAGATTTGCTTTGGCTTTTCTTTaGTGGTCAGAGCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: ASTLLSGCDSFSTLGLRFALAFL*WSEHCC
Trigger: ACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGC...AAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAGATAACAAAGTAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATATGGCTGCCAGAATTTaGAAAAAGTATCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNMAARI*KKYPCC
Trigger: GCAGCAAGGATACTTTTTCAAAATTCTGGCAGCCAT...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCAAGGATTTTGTATTACTaGACTCAAGGGGCTCTCGCA +
Preference number: 5 (lower is better)
Translates to: TFITNRIALCYVVIDMSPRILYY*TQGALA
Trigger: TGCGAGAGCCCCTTGAGTCAAGTAATACAAAATCCT...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp ACCTTCATAACCAATAGAATAGCTCTGTGTTACGTTGTTATTGATATGTCCCCACACTGTGGAAGGATTTaGTATTACTTGACTCAAGGG +
Preference number: 5 (lower is better)
Translates to: TFITNRIALCYVVIDMSPHCGRI*YYLTQG
Trigger: CCCTTGAGTCAAGTAATACAAAATCCTTCCACAGTG...TGGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCACCCTGAAATTGGAGTaGACTGTGAACATGGAACAA +
Preference number: 5 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCTLKLE*TVNMEQ
Trigger: TTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGT...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp GTCATTATCTACATGATGTTTCCTACTACTGACATCTGCCTGGGTTACAGCAATAATGGAAGGCAACATTaGACTTCTGAACAAGAATCA +
Preference number: 5 (lower is better)
Translates to: VIIYMMFPTTDICLGYSNNGRQH*TSEQES
Trigger: TGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCATT...ATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGAAACATCATGTAGATAATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS TCA 90 bp CAATTAGACCTTTTGGAGACCAGGATTATCCTAGAGAAGCACTTCTaGCATGATGGATATATAAAACTTGAATTCTGGAGAGCAAGTACT +
Preference number: 5 (lower is better)
Translates to: QLDLLETRIILEKHF*HDGYIKLEFWRAST
Trigger: AGTACTTGCTCTCCAGAATTCAAGTTTTATATATCCATCATGTCAGAAGTGCTTCTCTAGGATAATCCTGGTCTCCAAAAGGTCTAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000329143.4
ENST00000524921.5
ENST00000525361.5
ENST00000525388.5
ENST00000528189.5
ENST00000528262.5
ENST00000532277.5
ENST00000532589.5
ENST00000532764.5
ENST00000533655.6
CDS-3UTR CAA 90 bp GGAACCCTGAAATTGGAGTTGACTGTGAACATGGAACAAAGTCTTGACTATTTTAAAAGTCTGCAAAAGTaGATGGAAGTAGTCAATGAC +
Preference number: 5 (lower is better)
Translates to: GTLKLELTVNMEQSLDYFKSLQK*MEVVND
Trigger: GTCATTGACTACTTCCATCAACTTTTGCAGACTTTT...AAAATAGTCAAGACTTTGTTCCATGTTCACAGTCAACTCCAATTTCAGGGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCTGTGTTACGTTGTTATaGATATGTCCCCAAGGCATT +
Preference number: 5 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCCVTLL*ICPQGI
Trigger: AATGCCTTGGGGACATATCAATAACAACGTAACACA...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS-3UTR CAA 90 bp TCATCATTATCTGTTAGTTGTGAAACAATGCAAGTGAATTCAAGTGATGGCTGCAAAAGGAAGTCATCTTaGCTACAGTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: SSLSVSCETMQVNSSDGCKRKSS*LQFALT
Trigger: AGTCAAAGCAAACTGTAGCAAAGATGACTTCCTTTT...GCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528759.5
CDS CCA 72 bp GCTGAGCCTCCTGGGCGTAGGGTTCCCGGGAAAGTGTaGAGTGAGCCGCAGCGCCCTGGGGTCTGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: AEPPGRRVPGKV*SEPQRPGVWRG
Trigger: ACCCCGCCAGACCCCAGGGCGCTGCGGCTCACTCCACACTTTCCCGGGAACCCTACGCCCAGGAGGCTCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS TCA 72 bp GGGAGAAGACCAGGAACGGGCCCAGGCGACGCACAGTaGCTCGGACCGGCCGAACTCAGTAGCACGCCGGCA +
Preference number: 6 (lower is better)
Translates to: GRRPGTGPGDAQ*LGPAELSSTPA
Trigger: TGCCGGCGTGCTACTGAGTTCGGCCGGTCCGAGTCACTGTGCGTCGCCTGGGCCCGTTCCTGGTCTTCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000524921.5
ENST00000525361.5
ENST00000525388.5
ENST00000528189.5
ENST00000528759.5
ENST00000532277.5
ENST00000532589.5
ENST00000532764.5
ENST00000533655.6
CDS TCA 72 bp CCGCGTCCTTTTCCGCCGGAAGTAACGCTTTGGCTCTaGTTACTCAGAGCCAATCAGAAGAAGGCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: PRPFPPEVTLWL*LLRANQKKAPQ
Trigger: CTGCGGCGCCTTCTTCTGATTGGCTCTGAGTAATCAGAGCCAAAGCGTTACTTCCGGCGGAAAAGGACGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS CAA 90 bp CTTCCAATCGAATCTCCCGCGTCCTTTTCCGCCGGAAGTAACGCTTaGGCTCTGATTACTCAGAGCCAATCAGAAGAAGGCGCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: LPIESPASFSAGSNA*ALITQSQSEEGAAE
Trigger: CTCTGCGGCGCCTTCTTCTGATTGGCTCTGAGTAATCAGAGCCAAAGCGTTACTTCCGGCGGAAAAGGACGCGGGAGATTCGATTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS CCA 72 bp TACTCAGAGCCAATCAGAAGAAGGCGCCGCAGAGGGTaGAGCTTAGCGAGGAAATCCTACAAGCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: YSEPIRRRRRRG*SLARKSYKHLE
Trigger: TTCCAGATGCTTGTAGGATTTCCTCGCTAAGCTCCACCCTCTGCGGCGCCTTCTTCTGATTGGCTCTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS CAA 72 bp GAATCTCCCGCGTCCTTTTCCGCCGGAAGTAACGCTTaGGCTCTGATTACTCAGAGCCAATCAGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: ESPASFSAGSNA*ALITQSQSEEG
Trigger: GCCTTCTTCTGATTGGCTCTGAGTAATCAGAGCCAAAGCGTTACTTCCGGCGGAAAAGGACGCGGGAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS CCA 72 bp AAGAAATTTTCGTCTTCTGTTCATGTGTTCACACCGTaGTCTGAGGTAGGGAGTTTGAGACCAGCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: KKFSSSVHVFTP*SEVGSLRPAWP
Trigger: TGGCCAGGCTGGTCTCAAACTCCCTACCTCAGACCACGGTGTGAACACATGAACAGAAGACGAAAATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525361.5
CDS CCA 72 bp TTAGCATCTTGGGTGGCTGGGTCTGGTAGAACAATCTaGCAAGCCACTAGTGCTTTGGCTTTTCTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: LASWVAGSGRTI*QATSALAFLLW
Trigger: CCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCCAGCCACCCAAGATGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525361.5
CDS CAA 90 bp TGGGTGGCTGGGTCTGGTAGAACAATCTGGCAAGCCACTAGTGCTTaGGCTTTTCTTTTGTGGTCAGAGCATTGCTGTAAGAAGTTACTG +
Preference number: 6 (lower is better)
Translates to: WVAGSGRTIWQATSA*AFLLWSEHCCKKLL
Trigger: CAGTAACTTCTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCCAGCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525361.5
CDS CCA 72 bp GTAAAGCCTGCAATACCTGGGTCTGGTAGAACAATCTaGCAAGCCACTAGTGCTTTGGCTTTTCTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: VKPAIPGSGRTI*QATSALAFLLW
Trigger: CCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329143.4
ENST00000525388.5
ENST00000528759.5
ENST00000533655.6
ENST00000533750.1
CDS CAA 72 bp GGGTCTGGTAGAACAATCTGGCAAGCCACTAGTGCTTaGGCTTTTCTTTTGTGGTCAGAGCATTGCTGTAAG +
Preference number: 6 (lower is better)
Translates to: GSGRTIWQATSA*AFLLWSEHCCK
Trigger: CTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329143.4
ENST00000525361.5
ENST00000525388.5
ENST00000528759.5
ENST00000533655.6
ENST00000533750.1
CDS CAA 90 bp GCAATACCTGGGTCTGGTAGAACAATCTGGCAAGCCACTAGTGCTTaGGCTTTTCTTTTGTGGTCAGAGCATTGCTGTAAGAAGTTACTG +
Preference number: 6 (lower is better)
Translates to: AIPGSGRTIWQATSA*AFLLWSEHCCKKLL
Trigger: CAGTAACTTCTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGACCCAGGTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329143.4
ENST00000525388.5
ENST00000528759.5
ENST00000533655.6
ENST00000533750.1
CDS CAA 90 bp TCTGGTAGAACAATCTGGCAAGCCACTAGTGCTTTGGCTTTTCTTTaGTGGTCAGAGCATTGCTGTAAGAAGTTACTGGCATCTGAACCT +
Preference number: 6 (lower is better)
Translates to: SGRTIWQATSALAFL*WSEHCCKKLLASEP
Trigger: AGGTTCAGATGCCAGTAACTTCTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCCAGATTGTTCTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329143.4
ENST00000525361.5
ENST00000525388.5
ENST00000528759.5
ENST00000533655.6
ENST00000533750.1
CDS CCA 72 bp GATCTGTTCGGTTTTTGGCTAACATCTTCCAGAAGGTaGTCCCAAATCCCAGTTCTGTTTAAATTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: DLFGFWLTSSRR*SQIPVLFKFSP
Trigger: AGGAGAAAATTTAAACAGAACTGGGATTTGGGACCACCTTCTGGAAGATGTTAGCCAAAAACCGAACAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532277.5
CDS TCA 72 bp CTTTTGGAGACCAGGATTATCCTAGAGAAGCACTTCTaGCATGATGGATATATAAAACTTGAATTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LLETRIILEKHF*HDGYIKLEFWR
Trigger: TCTCCAGAATTCAAGTTTTATATATCCATCATGTCAGAAGTGCTTCTCTAGGATAATCCTGGTCTCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329143.4
ENST00000524921.5
ENST00000525361.5
ENST00000525388.5
ENST00000528189.5
ENST00000528262.5
ENST00000528759.5
ENST00000532277.5
ENST00000532589.5
ENST00000532764.5
ENST00000533655.6