RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDAH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153904

Ensembl transcript IDs: ENST00000284031.13, ENST00000426972.8, ENST00000633113.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGTAGTCAGAGGCAGAGGAGACCAATGGCAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGGAAAGACCTTGGGTTTTACCCAAGG +
Preference number: 1 (lower is better)
Translates to: DVVRGRGDQWQTGWT*RKVARRKDLGFYPR
Trigger: CCTTGGGTAAAACCCAAGGTCTTTCCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTGCCATTGGTCTCCTCTGCCTCTGACTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 90 bp CCTTCTGATACTGGATTTACCTTCCTAGGTGTGGTGCCCTCCTTCTaGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: PSDTGFTFLGVVPSF*NLDLWGKPCQDVPL
Trigger: CAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGAGGGCACCACACCTAGGAAGGTAAATCCAGTATCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 90 bp GTCCACTGTCTGGGGTTGGGTTCAAGCATCAAGGTGATCGCTTCCTaGACATGTTCATTGACCATGAGGAGCTGTTTACTCTGGCTCATA +
Preference number: 1 (lower is better)
Translates to: VHCLGLGSSIKVIAS*TCSLTMRSCLLWLI
Trigger: TATGAGCCAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTTGAACCCAACCCCAGACAGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 90 bp TTAATCTTAAACAACAAGCCACAGGCAATACAGGAAAGGTGGAGATaGCTAGGAAGTGTGATAATGTGCCTGGATCAGTTACCATTCATT +
Preference number: 1 (lower is better)
Translates to: LILNNKPQAIQERWR*LGSVIMCLDQLPFI
Trigger: AATGAATGGTAACTGATCCAGGCACATTATCACACTTCCTAGTCATCTCCACCTTTCCTGTATTGCCTGTGGCTTGTTGTTTAAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 90 bp ATTCAACTTAGAATCAAATTTTGTAAACAAGAGTTAGTAGCACAGTaGCACAGTAGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAG +
Preference number: 1 (lower is better)
Translates to: IQLRIKFCKQELVAQ*HSRLSRKTTGVGTE
Trigger: CTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTTACAAAATTTGATTCTAAGTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 90 bp CCAAGGTCATATATGGTCAGTAATGAAGCAAAAATTCATGGTATGTaGCTTAAAGACTTTCTAAGACATTGTACCCATGGGATGTTTCCA +
Preference number: 1 (lower is better)
Translates to: PRSYMVSNEAKIHGM*LKDFLRHCTHGMFP
Trigger: TGGAAACATCCCATGGGTACAATGTCTTAGAAAGTCTTTAAGTCACATACCATGAATTTTTGCTTCATTACTGACCATATATGACCTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCCAGAGTCATCGGCCTTaGCTGTGCGGTCTTGCCGGC +
Preference number: 2 (lower is better)
Translates to: LTLPQTAALISVTVLLRSQSHRP*LCGLAG
Trigger: GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTG...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTCATCGGCCTTGCCTGTaGGGTCTTGCCGGCTACCGG +
Preference number: 2 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFHRPCL*GLAGYR
Trigger: CCGGTAGCCGGCAAGACCGCACAGGCAAGGCCGATG...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGGCAGAGGAGACCAATaGCAGACAGGGTGGACCTGC +
Preference number: 2 (lower is better)
Translates to: SELKGRERHDWFWHTEWIGRGDQ*QTGWTC
Trigger: GCAGGTCCACCCTGTCTGCCATTGGTCTCCTCTGCC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGCAGAGTCATCGGCCTTaGCTGTGCGGTCTTGCCGGC +
Preference number: 2 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLQSHRP*LCGLAG
Trigger: GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTG...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCCAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIQTGWT*RKVARR
Trigger: CCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTG...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGGCAGGGGTAGAAGACTaGAAATACGGTGAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLAGVED*KYGESG
Trigger: CCCTGACTCACCGTATTTCCAGTCTTCTACCCCTGC...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAAGACTGGAAATACGGTaGGTCAGGGTAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: SELKGRERHDWFWHTEWIRLEIR*VRVGGN
Trigger: GTTTCCACCTACCCTGACTCACCGTATTTCCAGTCT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCGGAAAACAACAGGAGTaGGCACAGAGTCATCGGCCT +
Preference number: 2 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIGKQQE*AQSHRP
Trigger: AGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCC...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAGTTCAAGCATCAAGGTaGTCGCTTCCTGAACATGTT +
Preference number: 2 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAVQASR*SLPEHV
Trigger: AACATGTTCAGGAAGCGATCACCTTGATGCTTGAAC...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAGAGTTAGTAGCACAGTaGCACAGTAGATTGTCAAGG +
Preference number: 2 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAELVAQ*HSRLSR
Trigger: CCTTGACAATCTACTGTGCCACTGTGCTACTAACTC...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAAAGGTGATCGCTTCCTaGACATGTTCATTGACCATG +
Preference number: 2 (lower is better)
Translates to: SELKGRERHDWFWHTEWIKVIAS*TCSLTM
Trigger: CATGGTCAATGAACATGTTCAGGAAGCGATCACCTT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYQTGWT*RKVARR
Trigger: CCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CAA 90 bp AAAGTACCGTTTCCCCTGCCTGTTAATAGGCTGATTCCTGCAGGTTaGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCATTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: KVPFPLPVNRLIPAG*SKGIISSFSAALFF
Trigger: AAAGAACAATGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCTATTAACAGGCAGGGGAAACGGTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAGCAAGCTTATCTGACTaGTCAAGAAGACATTCTTCA +
Preference number: 2 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAASLSD*SRRHSS
Trigger: TGAAGAATGTCTTCTTGATCAGTCAGATAAGCTTGC...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTGGAATTTAGATCTCTaGGGCAAACCCTGTCAGGAT +
Preference number: 2 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIWNLDL*GKPCQD
Trigger: ATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATGCAGGGGTAGAAGACTaGAAATACGGTGAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYAGVED*KYGESG
Trigger: CCCTGACTCACCGTATTTCCAGTCTTCTACCCCTGC...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGACAGTGACCAAGACGTaGTTTATTCACAGGATGCAC +
Preference number: 2 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLTVTKT*FIHRMH
Trigger: GTGCATCCTGTGAATAAACCACGTCTTGGTCACTGT...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAAATACAGACACTAAATaGGTGTTTCCTTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: SELKGRERHDWFWHTEWINTDTK*VFPYWD
Trigger: ATCCCAGTAAGGAAACACTCATTTAGTGTCTGTATT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGAAAAGCAAGCTTATCTaGCTGATCAAGAAGACATTC +
Preference number: 2 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLKSKLI*LIKKTF
Trigger: GAATGTCTTCTTGATCAGTCAGATAAGCTTGCTTTT...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTGGAAAACAACAGGAGTaGGCACAGAGTCATCGGCCT +
Preference number: 2 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESGKQQE*AQSHRP
Trigger: AGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCC...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATGTTTCTCCTTCCATCTaGTACGGGGGAAATGAAATG +
Preference number: 2 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYVSPSI*YGGNEM
Trigger: CATTTCATTTCCCCCGTAGCAGATGGAAGGAGAAAC...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTCAGGAAAGGTGGAGATaGCTAGGAAGTGTGATAATG +
Preference number: 2 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESQERWR*LGSVIM
Trigger: CATTATCACACTTCCTAGTCATCTCCACCTTTCCTG...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR GCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCATCTCTTCCTTCAGTaGCGCATTGTTCTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYHLFLQ*RIVLCK
Trigger: CTTACAAAGAACAATGCGGCACTGAAGGAAGAGATG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCTTTTAGCAACCTTCTaGTACTGGATTTACCTTCCT +
Preference number: 2 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYLLATF*YWIYLP
Trigger: AGGAAGGTAAATCCAGTATCAGAAGGTTGCTAAAAG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR TCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTAAAAGCAAGCTTATCTaGCTGATCAAGAAGACATTC +
Preference number: 2 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESKSKLI*LIKKTF
Trigger: GAATGTCTTCTTGATCAGTCAGATAAGCTTGCTTTT...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCACAGAGTCATCGGCCTaGCCTGTGCGGTCTTGCCGG +
Preference number: 3 (lower is better)
Translates to: LTLPQTAALISVTVLLRSTESSA*PVRSCR
Trigger: CCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGT...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR GCA 72 bp AGAGGCAGAGGAGACCAATGGCAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGGAAAGACCTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: RGRGDQWQTGWT*RKVARRKDLGF
Trigger: AAACCCAAGGTCTTTCCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTGCCATTGGTCTCCTCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAACAGAGTCATCGGCCTaGCCTGTGCGGTCTTGCCGG +
Preference number: 3 (lower is better)
Translates to: SELKGRERHDWFWHTEWITESSA*PVRSCR
Trigger: CCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 72 bp AGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAGTaGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTT +
Preference number: 3 (lower is better)
Translates to: SGTVDCQGKQQE*AQSHRPCLCGL
Trigger: AAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCTACTGTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 72 bp CTAGGTGTGGTGCCCTCCTTCTGGAATTTAGATCTCTaGGGCAAACCCTGTCAGGATGTGCCTCTGTGTAGT +
Preference number: 3 (lower is better)
Translates to: LGVVPSFWNLDL*GKPCQDVPLCS
Trigger: ACTACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGAGGGCACCACACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGTGAGGGGAGGGTTGTaGGTGGCAGATGTAGTCAGA +
Preference number: 3 (lower is better)
Translates to: SELKGRERHDWFWHTEWIVRGGL*VADVVR
Trigger: TCTGACTACATCTGCCACCAACAACCCTCCCCTCAC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 72 bp CTGGGGTTGGGTTCAAGCATCAAGGTGATCGCTTCCTaGACATGTTCATTGACCATGAGGAGCTGTTTACTC +
Preference number: 3 (lower is better)
Translates to: LGLGSSIKVIAS*TCSLTMRSCLL
Trigger: GAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTTGAACCCAACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGGTCCACTGTCTGGGGTaGGGTTCAAGCATCAAGGTG +
Preference number: 3 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLVHCLG*GSSIKV
Trigger: CACCTTGATGCTTGAACCCAACCCCAGACAGTGGAC...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 72 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTaGCACACAGAGTGGATAACCATACATTGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: SELKGRERHDWF*HTEWITIHWLE
Trigger: TTCCAGCCAATGTATGGTTATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGAGACTTTCTAAGACATaGTACCCATGGGATGTTTCC +
Preference number: 3 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLRLSKT*YPWDVS
Trigger: GGAAACATCCCATGGGTACAATGTCTTAGAAAGTCT...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGTCCTTCAGTGCCGCATaGTTCTTTGTAAGAGATCCG +
Preference number: 3 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLSFSAA*FFVRDP
Trigger: CGGATCTCTTACAAAGAACAATGCGGCACTGAAGGA...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 72 bp AACAACAAGCCACAGGCAATACAGGAAAGGTGGAGATaGCTAGGAAGTGTGATAATGTGCCTGGATCAGTTA +
Preference number: 3 (lower is better)
Translates to: NNKPQAIQERWR*LGSVIMCLDQL
Trigger: TAACTGATCCAGGCACATTATCACACTTCCTAGTCATCTCCACCTTTCCTGTATTGCCTGTGGCTTGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 72 bp AACTTCTCTGAACTAAAGGGCCGTGAAAGGCATGATTaGTTTTGGCACACAGAGTGGATAACCATACATTGG +
Preference number: 3 (lower is better)
Translates to: NFSELKGRERHD*FWHTEWITIHW
Trigger: CCAATGTATGGTTATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGAGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAGACTTTCTAAGACATaGTACCCATGGGATGTTTCC +
Preference number: 3 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFRLSKT*YPWDVS
Trigger: GGAAACATCCCATGGGTACAATGTCTTAGAAAGTCT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGGGAGAATTTTTGCTTTaGCCAAGGAAGGGCCAGATT +
Preference number: 3 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLGEFLL*PRKGQI
Trigger: AATCTGGCCCTTCCTTGGCAAAAGCAAAAATTCTCC...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGACATGATGTCTCTTTaGAAAGAAATGACTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SELKGRERHDWFWHTEWIDMMSL*KEMTLL
Trigger: CAGCAAAGTCATTTCTTTCAAAAGAGACATCATGTC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR TCA 72 bp TGGCACACAGAGTGGATAACCATACATTGGCTGGAATaGGGTGGTCAGGAAAATAAAATGCACAAATCTAAC +
Preference number: 3 (lower is better)
Translates to: WHTEWITIHWLE*GGQENKMHKSN
Trigger: GTTAGATTTGTGCATTTTATTTTCCTGACCACCTCATTCCAGCCAATGTATGGTTATCCACTCTGTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR GCA 72 bp GTATTTGAGATGTTGAGCTCTCACAGGGAGAATTTTTaGTTTTGCCAAGGAAGGGCCAGATTTAACCCAAAA +
Preference number: 3 (lower is better)
Translates to: VFEMLSSHRENF*FCQGRARFNPK
Trigger: TTTTGGGTTAAATCTGGCCCTTCCTTGGCAAAAGCAAAAATTCTCCCTGTGAGAGCTCAACATCTCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCCAGAAGGAAAGACCTaGGGTTTTACCCAAGGTCAA +
Preference number: 3 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYPEGKT*GFTQGQ
Trigger: TTGACCTTGGGTAAAACCCAAGGTCTTTCCTTCTGG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTCAGTGGCACAGTAGATaGTCAAGGAAAACAACAGGA +
Preference number: 3 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESQWHSR*SRKTTG
Trigger: TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTG...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR CCA 72 bp GATGAGATGGTTCAAAATATGACAGTGACCAAGACGTaGTTTATTCACAGGATGCACATAATTGGATATCTG +
Preference number: 3 (lower is better)
Translates to: DEMVQNMTVTKT*FIHRMHIIGYL
Trigger: CAGATATCCAATTATGTGCATCCTGTGAATAAACCACGTCTTGGTCACTGTCATATTTTGAACCATCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTTATTTCAAAGTAGAATaGTCCACTGTCTGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESYFKVE*STVWGW
Trigger: CCAACCCCAGACAGTGGACAATTCTACTTTGAAATA...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
3UTR-3UTR CAA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTCTGATTCCTGCAGGTTaGAGTAAAGGAATCATCTCT +
Preference number: 3 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESLIPAG*SKGIIS
Trigger: AGAGATGATTCCTTTACTCAAACCTGCAGGAATCAG...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCGCGCTTCTCAGCGCGTaGTGGCCGAGCGACTCGGGT +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGALLSA*WPSDSG
Trigger: ACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGC...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS-3UTR GCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCCAGAGTCATCGGCCTTaGCTGTGCGGTCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGQSHRP*LCGLAG
Trigger: GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTG...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCCAACTTGGACTGATCTaGGGCTCCCAGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGQLGLI*GSQRRR
Trigger: CCGCCTCCGCTGGGAGCCGCAGATCAGTCCAAGTTG...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCGCAGGGGTAGAAGACTaGAAATACGGTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGAGVED*KYGESG
Trigger: CCCTGACTCACCGTATTTCCAGTCTTCTACCCCTGC...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGATCCGTCAACTTGGACTaGTCTGCGGCTCCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRSVNLD*SAAPSG
Trigger: TCCGCTGGGAGCCGCAGATCAGTCCAAGTTGACGGA...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR GCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCACATCGGCCTTGCCTGTaGGGTCTTGCCGGCTACCGG +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAHRPCL*GLAGYR
Trigger: CCGGTAGCCGGCAAGACCGCACAGGCAAGGCCGATG...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTCAGAGTCATCGGCCTTaGCTGTGCGGTCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCQSHRP*LCGLAG
Trigger: GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTG...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCTTCTCAGCGCGTGCTaGCCGAGCGACTCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGLLSAC*PSDSGS
Trigger: GCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS-3UTR CCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCGAATTGTCCACTGTCTaGGGTTGGGTTCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGELSTV*GWVQAS
Trigger: TGATGCTTGAACCCAACCCCAGACAGTGGACAATTC...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGGCAGCCCCAGCTTGCTaGCCAGCACGCCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLAAPAC*PARPRR
Trigger: TCTACGTGGGCGTGCTGGGCAGCAAGCTGGGGCTGC...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS-3UTR GCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGTCTTCCGGGGTTCGGTaGAGCAAGACGTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVSSGVR*SKTCPL
Trigger: CAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGA...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGCATCGGCCTTGCCTGTaGGGTCTTGCCGGCTACCGG +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLHRPCL*GLAGYR
Trigger: CCGGTAGCCGGCAAGACCGCACAGGCAAGGCCGATG...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGCCACCTCCTCGCCCTTaGCGCTTCTCAGCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLPPPRP*RFSARA
Trigger: AGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGG...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS-3UTR CCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCGAGTTAGTAGCACAGTaGCACAGTAGATTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGELVAQ*HSRLSR
Trigger: CCTTGACAATCTACTGTGCCACTGTGCTACTAACTC...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGATCTTTGGGCAGGACTTaGGGAGCCGCTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRSLGRT*GAAVSL
Trigger: AAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGA...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCTGGCACTGTGGAGACTaGATAGTCCTTAAAAGTATC +
Preference number: 4 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGWHCGD*IVLKSI
Trigger: GATACTTTTAAGGACTATGCAGTCTCCACAGTGCCA...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGTGTCATCAGGCACAGTaGGTTTGTCGTAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVCHQAQ*VCRSGG
Trigger: ACCACCGCTACGACAAACTCACTGTGCCTGATGACA...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGAAACTGAGCAGCAGGTaGGCAGCCCATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVKLSSR*AAHPPF
Trigger: AAAAGGTGGATGGGCTGCTCACCTGCTGCTCAGTTT...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCAGTCACAGTTCTGCTaGGAAGCCTGTCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGQSQFC*EACLPL
Trigger: CAGGGGCAGACAGGCTTCTCAGCAGAACTGTGACTG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGATTCACTAGACCCAATTaGGATCAGGTTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRFTRPN*DQVRPS
Trigger: GCTGGGCCTAACCTGATCGCAATTGGGTCTAGTGAA...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCACAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAQTGWT*RKVARR
Trigger: CCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTG...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGACAGAAACTCTTCAAATaGAACCCATCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRQKLFK*NPSATG
Trigger: GCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTG...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGCAGACAGGGTGGACCTaGAGGAAGGTAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLQTGWT*RKVARR
Trigger: CCTTCTGGCTACCTTCCTGCAGGTCCACCCTGTCTG...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTCCACAACACACCCCCTaGTTTAAATGGGCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCPQHTP*FKWAAD
Trigger: GTCAGCTGCCCATTTAAAGCAGGGGGTGTGTTGTGG...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCCAACCCATCTGCCACTaGCACTGTGGAGACTGCATA +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSQPICH*HCGDCI
Trigger: TATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTG...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAAAGGAGGAGGATCCCTaGACCAGGGACTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAKEEDP*TRDFHR
Trigger: CCTGTGAAAGTCCCTGGTCCAGGGATCCTCCTCCTT...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTAGACTGGAAATACGGTaGGTCAGGGTAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCRLEIR*VRVGGN
Trigger: GTTTCCACCTACCCTGACTCACCGTATTTCCAGTCT...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGAAAGGTGATCGCTTCCTaGACATGTTCATTGACCATG +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRKVIAS*TCSLTM
Trigger: CATGGTCAATGAACATGTTCAGGAAGCGATCACCTT...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAACCTCCTGGCCCTGTTaGTCCAGCTTCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGTSWPC*SSFPPP
Trigger: TGGGGGTGGGAAGCTGGAGCAACAGGGCCAGGAGGT...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAGGAAAACAACAGGAGTaGGCACAGAGTCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAGKQQE*AQSHRP
Trigger: AGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCC...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAAGGCGACGGGAGGCTaGGGTTTCTGGACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFKATGG*GFWTVF
Trigger: AAAGACCGTCCAGAAACCCCAGCCTCCCGTCGCCTT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR TCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAAAACTGAGCAGCAGGTaGGCAGCCCATCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SELKGRERHDWFWHTEWIKLSSR*AAHPPF
Trigger: AAAAGGTGGATGGGCTGCTCACCTGCTGCTCAGTTT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGCAGTCACAGTTCTGCTaGGAAGCCTGTCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLQSQFC*EACLPL
Trigger: CAGGGGCAGACAGGCTTCTCAGCAGAACTGTGACTG...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGAAGGTGATCGCTTCCTaGACATGTTCATTGACCATG +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVKVIAS*TCSLTM
Trigger: CATGGTCAATGAACATGTTCAGGAAGCGATCACCTT...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGACACACAGAGTCTAAGTaGTTTCTCCAGACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRHTESK*FLQTKE
Trigger: CTCTTTTGTCTGGAGAAATCACTTAGACTCTGTGTG...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCATAGCAGAGCAGAATaGAATGTAGAAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVHSRAE*NVEEAH
Trigger: GTGTGCCTCTTCTACATTGCATTCTGCTCTGCTATG...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAAGGAGGAGGATCCCTaGACCAGGGACTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFKEEDP*TRDFHR
Trigger: CCTGTGAAAGTCCCTGGTCCAGGGATCCTCCTCCTT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTTTCTGGACGGTCTTTaGGCAGGACTTGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIFLDGL*AGLEEP
Trigger: CGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAAA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAGGAGGCTGGGGTTTCTaGACGGTCTTTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGGGWGF*TVFGQD
Trigger: GTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCC...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTCCTGTCCGTCAACTTaGACTGATCTGCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSISCPST*TDLRLP
Trigger: TGGGAGCCGCAGATCAGTCCAAGTTGACGGACAGGA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR TCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGAGACTGGAAATACGGTaGGTCAGGGTAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLRLEIR*VRVGGN
Trigger: GTTTCCACCTACCCTGACTCACCGTATTTCCAGTCT...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGTTCACTAGACCCAATTaGGATCAGGTTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLFTRPN*DQVRPS
Trigger: GCTGGGCCTAACCTGATCGCAATTGGGTCTAGTGAA...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTCTTAAGGGCCTTCTGTaGAGATTCACTAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCLKGLL*RFTRPN
Trigger: ATTGGGTCTAGTGAATCTGCACAGAAGGCCCTTAAG...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCTGGTCACTCATCTGTTaGATGATCTTAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSWSLIC*MILRAF
Trigger: GAAGGCCCTTAAGATCATGCAACAGATGAGTGACCA...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGATCTTCCGGGGTTCGGTaGAGCAAGACGTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGSSGVR*SKTCPL
Trigger: CAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGA...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCACAGTGACCAAGACGTaGTTTATTCACAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSTVTKT*FIHRMH
Trigger: GTGCATCCTGTGAATAAACCACGTCTTGGTCACTGT...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCCTGGTAAGCCTAAACTaGCAGATTGGGCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSLVSLN*QIGPFF
Trigger: GAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAG...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCCCTACTGAAAAGTCTTaGCCAAAGTTACCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSPTEKS*PKLPEL
Trigger: GAGCTCTGGTAACTTTGGCCAAGACTTTTCAGTAGG...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR TCA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCTTTTAGCAACCTTCTaGTACTGGATTTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLSRKTTGVGTESSALPVLLATF*YWIYLP
Trigger: AGGAAGGTAAATCCAGTATCAGAAGGTTGCTAAAAG...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTTCCTGTGGTTGTATTTaGGATGTTGAGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGSCGCI*DVELSQ
Trigger: CTGTGAGAGCTCAACATCTCAAATACAACCACAGGA...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTTTTCCAGTTCAGACATaGTCACGGGGATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGFPVQT*SRGSAY
Trigger: ATATGCTGATCCCCGTGAGCATGTCTGAACTGGAAA...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATACACAGGGAGAATTTTTaGTTTTGCCAAGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SELKGRERHDWFWHTEWIHRENF*FCQGRA
Trigger: GGCCCTTCCTTGGCAAAAGCAAAAATTCTCCCTGTG...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCTGGTAAGCCTAAACTaGCAGATTGGGCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGLVSLN*QIGPFF
Trigger: GAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTTTTTGGCACACAGAGTaGATAACCATACATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCFWHTE*ITIHWL
Trigger: CAGCCAATGTATGGTTATCCACTCTGTGTGCCAAAA...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACCCCCTGCTTTAAATaGGCAGCTGACGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFTPCFK*AADGKV
Trigger: AACCTTACCGTCAGCTGCCCATTTAAAGCAGGGGGT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTCGCTCCCACACCTCCTaGCCCTGTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESRSHTS*PCCSSF
Trigger: GAAGCTGGAGCAACAGGGCCAGGAGGTGTGGGAGCG...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTATTTCAGCACCTCGTTaGTTTGTCCTTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGISAPR*FVLLER
Trigger: CCTTTCCAAAAGGACAAATCAACGAGGTGCTGAAAT...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGTTCAAGCATCAAGGTaGTCGCTTCCTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SELKGRERHDWFWHTEWIVQASR*SLPEHV
Trigger: AACATGTTCAGGAAGCGATCACCTTGATGCTTGAAC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCACACAGAGTCTAAGTaGTTTCTCCAGACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGHTESK*FLQTKE
Trigger: CTCTTTTGTCTGGAGAAATCACTTAGACTCTGTGTG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCATACATTGGCTGGAATaGGGTGGTCAGGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: LTLPQTAALISVTVLLRSIHWLE*GGQENK
Trigger: TTTATTTTCCTGACCACCTCATTCCAGCCAATGTAT...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGACAAATGCAACCCATCTaGCACTGGCACTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGQMQPI*HWHCGD
Trigger: GTCTCCACAGTGCCAGTGGCAGATGGGTTGCATTTG...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCATCTCTTCCTTCAGTaGCGCATTGTTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGHLFLQ*RIVLCK
Trigger: CTTACAAAGAACAATGCGGCACTGAAGGAAGAGATG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTGAAACCATAAACATTTaGACATTTCGCCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGETINI*TFRLLS
Trigger: GGACAGGAGGCGAAATGTGCAAATGTTTATGGTTTC...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATATGGAATTTAGATCTCTaGGGCAAACCCTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SELKGRERHDWFWHTEWIWNLDL*GKPCQD
Trigger: ATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCA...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTGTTAACTTGGGCATGTaGCTAACATTCGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGVNLGM*LTFVLS
Trigger: AGAGAGAACGAATGTTAGCCACATGCCCAAGTTAAC...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAGTTAACTTGGGCATGTaGCTAACATTCGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAVNLGM*LTFVLS
Trigger: AGAGAGAACGAATGTTAGCCACATGCCCAAGTTAAC...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAAGGCATGATTGGTTTTaGCACACAGAGTGGATAACC +
Preference number: 4 (lower is better)
Translates to: SELKGRERHDWFWHTEWIRHDWF*HTEWIT
Trigger: GGTTATCCACTCTGTGTGCCAAAACCAATCATGCCT...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCCAGGAAAGGTGGAGATaGCTAGGAAGTGTGATAATG +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIQERWR*LGSVIM
Trigger: CATTATCACACTTCCTAGTCATCTCCACCTTTCCTG...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTTCTGTTCAGAGTAGCTaGAAAGACCAATCAATACAC +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGSVQSS*KDQSIH
Trigger: GTGTATTGATTGGTCTTTTCAGCTACTCTGAACAGA...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCATCTGTTCAGAGTAGCTaGAAAGACCAATCAATACAC +
Preference number: 4 (lower is better)
Translates to: RLIPAGLSKGIISSFSAASVQSS*KDQSIH
Trigger: GTGTATTGATTGGTCTTTTCAGCTACTCTGAACAGA...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGCAGAAACTCTTCAAATaGAACCCATCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLQKLFK*NPSATG
Trigger: GCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTG...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTCTTAAGGGCCTTCTGTaGAGATTCACTAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFLKGLL*RFTRPN
Trigger: ATTGGGTCTAGTGAATCTGCACAGAAGGCCCTTAAG...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTGGTCACTCATCTGTTaGATGATCTTAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIWSLIC*MILRAF
Trigger: GAAGGCCCTTAAGATCATGCAACAGATGAGTGACCA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTTTTCCAGTTCAGACATaGTCACGGGGATCAGCATAT +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFFPVQT*SRGSAY
Trigger: ATATGCTGATCCCCGTGAGCATGTCTGAACTGGAAA...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCGTTTCTCCTTCCATCTaGTACGGGGGAAATGAAATG +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIVSPSI*YGGNEM
Trigger: CATTTCATTTCCCCCGTAGCAGATGGAAGGAGAAAC...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTGAGTTAGTAGCACAGTaGCACAGTAGATTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFELVAQ*HSRLSR
Trigger: CCTTGACAATCTACTGTGCCACTGTGCTACTAACTC...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGGAATTGTCCACTGTCTaGGGTTGGGTTCAAGCATCA +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLELSTV*GWVQAS
Trigger: TGATGCTTGAACCCAACCCCAGACAGTGGACAATTC...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCACAGTGACCAAGACGTaGTTTATTCACAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSITVTKT*FIHRMH
Trigger: GTGCATCCTGTGAATAAACCACGTCTTGGTCACTGT...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTATTTCAGCACCTCGTTaGTTTGTCCTTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFISAPR*FVLLER
Trigger: CCTTTCCAAAAGGACAAATCAACGAGGTGCTGAAAT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTAATACAGACACTAAATaGGTGTTTCCTTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LIHLANPQLRYHLEGREGNTDTK*VFPYWD
Trigger: ATCCCAGTAAGGAAACACTCATTTAGTGTCTGTATT...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGCTTTTAGCAACCTTCTaGTACTGGATTTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLLLATF*YWIYLP
Trigger: AGGAAGGTAAATCCAGTATCAGAAGGTTGCTAAAAG...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTTGGCACTGTGGAGACTaGATAGTCCTTAAAAGTATC +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFWHCGD*IVLKSI
Trigger: GATACTTTTAAGGACTATGCAGTCTCCACAGTGCCA...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTCATCTCTTCCTTCAGTaGCGCATTGTTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFHLFLQ*RIVLCK
Trigger: CTTACAAAGAACAATGCGGCACTGAAGGAAGAGATG...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGACACAGGGAGAATTTTTaGTTTTGCCAAGGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGHRENF*FCQGRA
Trigger: GGCCCTTCCTTGGCAAAAGCAAAAATTCTCCCTGTG...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGAGCCGCTGTTTCTCTTaGCTAATGTCGTCGATTACT +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLSRCFS*LMSSIT
Trigger: AGTAATCGACGACATTAGGCAAGAGAAACAGCGGCT...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCAACCCATCTGCCACTaGCACTGTGGAGACTGCATA +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYQPICH*HCGDCI
Trigger: TATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTTTTGGCACACAGAGTaGATAACCATACATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIFWHTE*ITIHWL
Trigger: CAGCCAATGTATGGTTATCCACTCTGTGTGCCAAAA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGAGGCATGATTGGTTTTaGCACACAGAGTGGATAACC +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLRHDWF*HTEWIT
Trigger: GGTTATCCACTCTGTGTGCCAAAACCAATCATGCCT...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCAAAATTCTCTGCCTGTaGATAAAACATCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIKILCL*IKHLRH
Trigger: ATGGCGGAGATGTTTTATTCACAGGCAGAGAATTTT...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTGCAAGCTTATCTGACTaGTCAAGAAGACATTCTTCA +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFASLSD*SRRHSS
Trigger: TGAAGAATGTCTTCTTGATCAGTCAGATAAGCTTGC...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGACAGGAAAGGTGGAGATaGCTAGGAAGTGTGATAATG +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGQERWR*LGSVIM
Trigger: CATTATCACACTTCCTAGTCATCTCCACCTTTCCTG...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTTGTATTTGAGATGTTaGGCTCTCACAGGGAGAATT +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSILYLRC*ALTGRI
Trigger: AATTCTCCCTGTGAGAGCTCAACATCTCAAATACAA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCGGTGCAGCAAGACGTaGCCTTTGTTGGGGATATTT +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYRCSKT*PLLGIF
Trigger: AAATATCCCCAACAAAGGGCACGTCTTGCTGCACCG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAAGACATTGTACCCATaGGATGTTTCCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFKTLYP*DVSKLL
Trigger: AAGAAGCTTGGAAACATCCCATGGGTACAATGTCTT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGACCTAAACTGGCAGATTaGGCCATTTTTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGPKLAD*AIFPVV
Trigger: AACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGG...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTCTAAATTTCTCTTCTaGGGCAAACTCATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSISKFLF*GKLILK
Trigger: CTTGAGGATGAGTTTGCCCCAGAAGAGAAATTTAGA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR TCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCAATACAGACACTAAATaGGTGTTTCCTTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSINTDTK*VFPYWD
Trigger: ATCCCAGTAAGGAAACACTCATTTAGTGTCTGTATT...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAAAAGCAAGCTTATCTaGCTGATCAAGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFKSKLI*LIKKTF
Trigger: GAATGTCTTCTTGATCAGTCAGATAAGCTTGCTTTT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGTTGTATTTGAGATGTTaGGCTCTCACAGGGAGAATT +
Preference number: 4 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLLYLRC*ALTGRI
Trigger: AATTCTCCCTGTGAGAGCTCAACATCTCAAATACAA...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTCGGTGCAGCAAGACGTaGCCTTTGTTGGGGATATTT +
Preference number: 4 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESRCSKT*PLLGIF
Trigger: AAATATCCCCAACAAAGGGCACGTCTTGCTGCACCG...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAGGAAGTGTGATAATGTaGCTGGATCAGTTACCATTC +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGGSVIM*LDQLPF
Trigger: GAATGGTAACTGATCCAGGCACATTATCACACTTCC...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATGTTCAAGCATCAAGGTaGTCGCTTCCTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYVQASR*SLPEHV
Trigger: AACATGTTCAGGAAGCGATCACCTTGATGCTTGAAC...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAATACATTGGCTGGAATaGGGTGGTCAGGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGIHWLE*GGQENK
Trigger: TTTATTTTCCTGACCACCTCATTCCAGCCAATGTAT...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTTTCTCATAAACCTTTaGACTTTCTGGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIFLINL*TFWILF
Trigger: GAAGAGTATCCAGAAAGTGCAAAGGTTTATGAGAAA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTTTTCTCATAAACCTTTaGACTTTCTGGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFFLINL*TFWILF
Trigger: GAAGAGTATCCAGAAAGTGCAAAGGTTTATGAGAAA...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCATAGCAGAGCAGAATaGAATGTAGAAGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYHSRAE*NVEEAH
Trigger: GTGTGCCTCTTCTACATTGCATTCTGCTCTGCTATG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCCTAAACTGGCAGATTaGGCCATTTTTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYPKLAD*AIFPVV
Trigger: AACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTTCCTGTGGTTGTATTTaGGATGTTGAGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESSCGCI*DVELSQ
Trigger: CTGTGAGAGCTCAACATCTCAAATACAACCACAGGA...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTGTTTCTCCTTCCATCTaGTACGGGGGAAATGAAATG +
Preference number: 4 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESVSPSI*YGGNEM
Trigger: CATTTCATTTCCCCCGTAGCAGATGGAAGGAGAAAC...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATAAAATTCTCTGCCTGTaGATAAAACATCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYKILCL*IKHLRH
Trigger: ATGGCGGAGATGTTTTATTCACAGGCAGAGAATTTT...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR GCA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTGGAAGTGTGATAATGTaGCTGGATCAGTTACCATTC +
Preference number: 4 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESGSVIM*LDQLPF
Trigger: GAATGGTAACTGATCCAGGCACATTATCACACTTCC...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATAAGACATTGTACCCATaGGATGTTTCCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYKTLYP*DVSKLL
Trigger: AAGAAGCTTGGAAACATCCCATGGGTACAATGTCTT...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR TCA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATAAAAGCAAGCTTATCTaGCTGATCAAGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYKSKLI*LIKKTF
Trigger: GAATGTCTTCTTGATCAGTCAGATAAGCTTGCTTTT...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS CCA 90 bp AGCGCGTGCTGGCCGAGCGACTCGGGTAGCGCCCGCACCACGGCGTaGGTGGCCCGGCCGAAGGCGGCGGGGTGGCCGAGCCCGGCCATG +
Preference number: 5 (lower is better)
Translates to: SACWPSDSGSARTTA*VARPKAAGWPSPAM
Trigger: CATGGCCGGGCTCGGCCACCCCGCCGCCTTCGGCCGGGCCACCCACGCCGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 90 bp CGTGCTGGCCGAGCGACTCGGGTAGCGCCCGCACCACGGCGTGGGTaGCCCGGCCGAAGGCGGCGGGGTGGCCGAGCCCGGCCATGGCTT +
Preference number: 5 (lower is better)
Translates to: RAGRATRVAPAPRRG*PGRRRRGGRARPWL
Trigger: AAGCCATGGCCGGGCTCGGCCACCCCGCCGCCTTCGGCCGGGCCACCCACGCCGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS GCA 90 bp GCGCGGGCGACGTCCACCTCCTCGCCCTTGGCGCTTCTCAGCGCGTaGTGGCCGAGCGACTCGGGTAGCGCCCGCACCACGGCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ARATSTSSPLALLSA*WPSDSGSARTTAWV
Trigger: CACCCACGCCGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 90 bp CGGGCGACGTCCACCTCCTCGCCCTTGGCGCTTCTCAGCGCGTGCTaGCCGAGCGACTCGGGTAGCGCCCGCACCACGGCGTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RATSTSSPLALLSAC*PSDSGSARTTAWVA
Trigger: GGCCACCCACGCCGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 90 bp GCTGGTGCTGCCGTTCCGCGCGGGCGACGTCCACCTCCTCGCCCTTaGCGCTTCTCAGCGCGTGCTGGCCGAGCGACTCGGGTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: AGAAVPRGRRPPPRP*RFSARAGRATRVAP
Trigger: GGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCGCGCGGAACGGCAGCACCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS GCA 90 bp AAACATTTGCACATTTCGCCTCCTGTCCGTCAACTTGGACTGATCTaGGGCTCCCAGCGGAGGCGGCGAGAAGGCGACGGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KHLHISPPVRQLGLI*GSQRRRREGDGRLG
Trigger: CCCCAGCCTCCCGTCGCCTTCTCGCCGCCTCCGCTGGGAGCCGCAGATCAGTCCAAGTTGACGGACAGGAGGCGAAATGTGCAAATGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCACAGAGTCATCGGCCTaGCCTGTGCGGTCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGTESSA*PVRSCR
Trigger: CCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGT...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS CCA 90 bp AGGCGGCGAGAAGGCGACGGGAGGCTGGGGTTTCTGGACGGTCTTTaGGCAGGACTTGAGGAGCCGCTGTTTCTCTTGCCTAATGTCGTC +
Preference number: 5 (lower is better)
Translates to: RRREGDGRLGFLDGL*AGLEEPLFLLPNVV
Trigger: GACGACATTAGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCCCGTCGCCTTCTCGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS TCA 90 bp ACCATAAACATTTGCACATTTCGCCTCCTGTCCGTCAACTTGGACTaGTCTGCGGCTCCCAGCGGAGGCGGCGAGAAGGCGACGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TINICTFRLLSVNLD*SAAPSGGGEKATGG
Trigger: GCCTCCCGTCGCCTTCTCGCCGCCTCCGCTGGGAGCCGCAGATCAGTCCAAGTTGACGGACAGGAGGCGAAATGTGCAAATGTTTATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCTCCTTCAGTGCCGCATaGTTCTTTGTAAGAGATCCG +
Preference number: 5 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGSFSAA*FFVRDP
Trigger: CGGATCTCTTACAAAGAACAATGCGGCACTGAAGGA...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCAACAGAGTCATCGGCCTaGCCTGTGCGGTCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: RLIPAGLSKGIISSFSAATESSA*PVRSCR
Trigger: CCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGT...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCGGTCTTGCCGGCCAGTGGCACAGTAGATaGTCAAGGAAAACAACAGGA +
Preference number: 5 (lower is better)
Translates to: KQQEWAQSHRPCLCGLAGQWHSR*SRKTTG
Trigger: TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTG...GCCGGCAAGACCGCACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS GCA 90 bp TTCTGGACGGTCTTTGGGCAGGACTTGAGGAGCCGCTGTTTCTCTTaGCTAATGTCGTCGATTACTAGCAGGCGCAACAGCACATGGTAT +
Preference number: 5 (lower is better)
Translates to: FWTVFGQDLRSRCFS*LMSSITSRRNSTWY
Trigger: ATACCATGTGCTGTTGCGCCTGCTAGTAATCGACGACATTAGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CAA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGAGAGCCGCTGTTTCTCTaGCCTAATGTCGTCGATTAC +
Preference number: 5 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLREPLFL*PNVVDY
Trigger: GTAATCGACGACATTAGGCAAGAGAAACAGCGGCTC...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS GCA 90 bp GTTAGGCCCAGCCATGCTGCAGAAACTCTTCAAATGCAACCCATCTaGCACTGGCACTGTGGAGACTGCATAGTCCTTAAAAGTATCAGC +
Preference number: 5 (lower is better)
Translates to: VRPSHAAETLQMQPI*HWHCGDCIVLKSIS
Trigger: GCTGATACTTTTAAGGACTATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTGCAGCATGGCTGGGCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS-3UTR CAA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGGTGGTCACTCATCTGTaGCATGATCTTAAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: RLSRKTTGVGTESSALPVVVTHL*HDLKGL
Trigger: AAGGCCCTTAAGATCATGCAACAGATGAGTGACCAC...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGTCTTTGGGCAGGACTaGAGGAGCCGCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SELKGRERHDWFWHTEWIVFGQD*RSRCFS
Trigger: AGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGAC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS CCA 90 bp CCCAGCCATGCTGCAGAAACTCTTCAAATGCAACCCATCTGCCACTaGCACTGTGGAGACTGCATAGTCCTTAAAAGTATCAGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: PSHAAETLQMQPICH*HCGDCIVLKSISQD
Trigger: ATCTTGGCTGATACTTTTAAGGACTATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTGCAGCATGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS-3UTR CAA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTTCCACCTCCTCGCCCTaGGCGCTTCTCAGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESSTSSP*ALLSAC
Trigger: GCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGA...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS-3UTR CAA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTCCAGAAGGAAAGACCTaGGGTTTTACCCAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCPEGKT*GFTQGQ
Trigger: TTGACCTTGGGTAAAACCCAAGGTCTTTCCTTCTGG...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTGTGAGGGGAGGGTTGTaGGTGGCAGATGTAGTCAGA +
Preference number: 5 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFVRGGL*VADVVR
Trigger: TCTGACTACATCTGCCACCAACAACCCTCCCCTCAC...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp ACCACCTCGAGGGGAGGGAGGGTGGGGGTGTTGAATGAAGCAATTCAACTTAGAAGACTTTCTAAGACATaGTACCCATGGGATGTTTCC +
Preference number: 5 (lower is better)
Translates to: TTSRGGRVGVLNEAIQLRRLSKT*YPWDVS
Trigger: GGAAACATCCCATGGGTACAATGTCTTAGAAAGTCT...TCTAAGTTGAATTGCTTCATTCAACACCCCCACCCTCCCTCCCCTCGAGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTTCACAGGGAGAATTTTaGCTTTTGCCAAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCSQGEF*LLPRKG
Trigger: GCCCTTCCTTGGCAAAAGCAAAAATTCTCCCTGTGA...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS GCA 90 bp TTGCATGATCTTAAGGGCCTTCTGTGCAGATTCACTAGACCCAATTaGGATCAGGTTAGGCCCAGCCATGCTGCAGAAACTCTTCAAATG +
Preference number: 5 (lower is better)
Translates to: LHDLKGLLCRFTRPN*DQVRPSHAAETLQM
Trigger: CATTTGAAGAGTTTCTGCAGCATGGCTGGGCCTAACCTGATCGCAATTGGGTCTAGTGAATCTGCACAGAAGGCCCTTAAGATCATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATACAGCACCTCGTTGATTaGTCCTTTTGGAAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: SELKGRERHDWFWHTEWIQHLVD*SFWKGP
Trigger: TGGGCCTTTCCAAAAGGACAAATCAACGAGGTGCTG...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCACCAGAAGGAAAGACCTaGGGTTTTACCCAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: RLIPAGLSKGIISSFSAAPEGKT*GFTQGQ
Trigger: TTGACCTTGGGTAAAACCCAAGGTCTTTCCTTCTGG...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTCAGCACCTCGTTGATTaGTCCTTTTGGAAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFQHLVD*SFWKGP
Trigger: TGGGCCTTTCCAAAAGGACAAATCAACGAGGTGCTG...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTGATTTCAGCACCTCGTaGATTTGTCCTTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCDFSTS*ICPFGK
Trigger: CTTTCCAAAAGGACAAATCAACGAGGTGCTGAAATC...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAGTCCACTGTCTGGGGTaGGGTTCAAGCATCAAGGTG +
Preference number: 5 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGVHCLG*GSSIKV
Trigger: CACCTTGATGCTTGAACCCAACCCCAGACAGTGGAC...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGTCCTTCAGTGCCGCATaGTTCTTTGTAAGAGATCCG +
Preference number: 5 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLSFSAA*FFVRDP
Trigger: CGGATCTCTTACAAAGAACAATGCGGCACTGAAGGA...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCGTTGTATTTGAGATGTaGAGCTCTCACAGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LTLPQTAALISVTVLLRSVVFEM*SSHREN
Trigger: ATTCTCCCTGTGAGAGCTCAACATCTCAAATACAAC...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS GCA 90 bp TTTGCACTTTCTGGATACTCTTCCGGGGTTCGGTGCAGCAAGACGTaGCCTTTGTTGGGGATATTTAGATATATACAGTTTGCTGCTATG +
Preference number: 5 (lower is better)
Translates to: FALSGYSSGVRCSKT*PLLGIFRYIQFAAM
Trigger: CATAGCAGCAAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTATCCAGAAAGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CCA 90 bp GCTTTAAATGGGCAGCTGACGGTAAGGTTCTCTAAATTTCTCTTCTaGGGCAAACTCATCCTCAAGATTCCCCAGTTGAAGTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: ALNGQLTVRFSKFLF*GKLILKIPQLKSRN
Trigger: GTTTCTGGACTTCAACTGGGGAATCTTGAGGATGAGTTTGCCCCAGAAGAGAAATTTAGAGAACCTTACCGTCAGCTGCCCATTTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS-3UTR CAA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCGTGGTCACTCATCTGTaGCATGATCTTAAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIVVTHL*HDLKGL
Trigger: AAGGCCCTTAAGATCATGCAACAGATGAGTGACCAC...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGGTTTCTCATAAACCTTaGCACTTTCTGGATACTCTT +
Preference number: 5 (lower is better)
Translates to: RLSRKTTGVGTESSALPVVSHKP*HFLDTL
Trigger: AAGAGTATCCAGAAAGTGCAAAGGTTTATGAGAAAC...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTTATTTCAAAGTAGAATaGTCCACTGTCTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LIHLANPQLRYHLEGREGYFKVE*STVWGW
Trigger: CCAACCCCAGACAGTGGACAATTCTACTTTGAAATA...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCTGATTCCTGCAGGTTaGAGTAAAGGAATCATCTCT +
Preference number: 5 (lower is better)
Translates to: LIHLANPQLRYHLEGREGLIPAG*SKGIIS
Trigger: AGAGATGATTCCTTTACTCAAACCTGCAGGAATCAG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGTTTTTCTTTGTTAACTaGGGCATGTGGCTAACATTC +
Preference number: 5 (lower is better)
Translates to: RLSRKTTGVGTESSALPVFFFVN*GMWLTF
Trigger: GAATGTTAGCCACATGCCCAAGTTAACAAAGAAAAA...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp CAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTACTCTGGGAGAATTTTTGCTTTaGCCAAGGAAGGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: QGDRFLNMFIDHEELFTLGEFLL*PRKGQI
Trigger: AATCTGGCCCTTCCTTGGCAAAAGCAAAAATTCTCC...CAGAGTAAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCTCACAGGGAGAATTTTaGCTTTTGCCAAGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSISQGEF*LLPRKG
Trigger: GCCCTTCCTTGGCAAAAGCAAAAATTCTCCCTGTGA...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AGATTGTCAAGGAAAACAACAGGAGTGGGCACAGAGTCATCGGCCTTGCCTGTGCCGTTAGTTTATCCATaGGTGTATATCACAACAGAT +
Preference number: 5 (lower is better)
Translates to: RLSRKTTGVGTESSALPVPLVYP*VYITTD
Trigger: ATCTGTTGTGATATACACCAATGGATAAACTAACGG...CACAGGCAAGGCCGATGACTCTGTGCCCACTCCTGTTGTTTTCCTTGACAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS CCA 90 bp TCAACCATAGCTGACTGCCATCAAATTGCCATCCAGAACTGCTTTTaGGAAGCAGTTCCTCCGCAATCTTTTCAACAGATTCCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: STIADCHQIAIQNCF*EAVPPQSFQQIPCF
Trigger: AAAACAGGGAATCTGTTGAAAAGATTGCGGAGGAACTGCTTCCCAAAAGCAGTTCTGGATGGCAATTTGATGGCAGTCAGCTATGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633113.1
CDS-3UTR CAA 90 bp AGGCTGATTCCTGCAGGTTTGAGTAAAGGAATCATCTCTTCCTTCAGTGCCGCACTCCGCCATCTAAAGTaGCATTTTCATCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: RLIPAGLSKGIISSFSAALRHLK*HFHLSS
Trigger: AGATGAAAGATGAAAATGCAACTTTAGATGGCGGAG...TGCGGCACTGAAGGAAGAGATGATTCCTTTACTCAAACCTGCAGGAATCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCTTAGATATATACAGTTaGCTGCTATGTCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: LTLPQTAALISVTVLLRSLDIYS*LLCHQA
Trigger: TGCCTGATGACATAGCAGCAAACTGTATATATCTAA...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTTTAGATATATACAGTTaGCTGCTATGTCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCLDIYS*LLCHQA
Trigger: TGCCTGATGACATAGCAGCAAACTGTATATATCTAA...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAACACTGCCCCAGACAGCAGCTCTGATTTCAGTCACAGTTCTGCTGAGAAGCCAGGAGTCTACTTTCTaGTTAATTAAAACTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LTLPQTAALISVTVLLRSQESTF*LIKTEQ
Trigger: CTGCTCAGTTTTAATTAACAAGAAAGTAGACTCCTG...GCTTCTCAGCAGAACTGTGACTGAAATCAGAGCTGCTGTCTGGGGCAGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATGTCCACTGTCTGGGGTaGGGTTCAAGCATCAAGGTG +
Preference number: 5 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYVHCLG*GSSIKV
Trigger: CACCTTGATGCTTGAACCCAACCCCAGACAGTGGAC...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCCTTCTGGAATTTAGATCTCTGGGGCAAACCCTGTCAGGATGTGCCTCTGTGTCGTGTCAGTTCAAAGTaGTGTAATTTAAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: SFWNLDLWGKPCQDVPLCRVSSK*CNLKAR
Trigger: TCTAGCCTTTAAATTACACAACTTTGAACTGACACG...ACACAGAGGCACATCCTGACAGGGTTTGCCCCAGAGATCTAAATTCCAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTAGCAAGACGTGCCCTTaGTTGGGGATATTTAGATAT +
Preference number: 5 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFSKTCP*LGIFRY
Trigger: ATATCTAAATATCCCCAACAAAGGGCACGTCTTGCT...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCAGGAGTCTACTTTCTaGTTAATTAAAACTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LIHLANPQLRYHLEGREGQESTF*LIKTEQ
Trigger: CTGCTCAGTTTTAATTAACAAGAAAGTAGACTCCTG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAAATGCACAAATCTAACACCATGTTGAAATCATGTCTGAGTTCTGGAGAAAGTGTGAGGGGAGGGTTGTaGGTGGCAGATGTAGTCAGA +
Preference number: 5 (lower is better)
Translates to: KMHKSNTMLKSCLSSGESVRGGL*VADVVR
Trigger: TCTGACTACATCTGCCACCAACAACCCTCCCCTCAC...ACTTTCTCCAGAACTCAGACATGATTTCAACATGGTGTTAGATTTGTGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTAATTCATTTAGCAAATCCACAGCTTAGGTACCACCTCGAGGGGAGGGAGGGTCGTGTCAGTTCAAAGTaGTGTAATTTAAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LIHLANPQLRYHLEGREGRVSSK*CNLKAR
Trigger: TCTAGCCTTTAAATTACACAACTTTGAACTGACACG...ACCCTCCCTCCCCTCGAGGTGGTACCTAAGCTGTGGATTTGCTAAATGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCACGGATATTTCAAAGTAGAATTGTCCACTGTCTGGGGTTGGGTTCAAGCATCATCAGTTACCATTCATaGGAAAGTACCGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: SRIFQSRIVHCLGLGSSIISYHS*ESTVSP
Trigger: AGGGGAAACGGTACTTTCCAATGAATGGTAACTGAT...GATGCTTGAACCCAACCCCAGACAGTGGACAATTCTACTTTGAAATATCCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGGATTTCAGCACCTCGTaGATTTGTCCTTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLDFSTS*ICPFGK
Trigger: CTTTCCAAAAGGACAAATCAACGAGGTGCTGAAATC...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TCTGAACTAAAGGGCCGTGAAAGGCATGATTGGTTTTGGCACACAGAGTGGATAGTTTCTCATAAACCTTaGCACTTTCTGGATACTCTT +
Preference number: 5 (lower is better)
Translates to: SELKGRERHDWFWHTEWIVSHKP*HFLDTL
Trigger: AAGAGTATCCAGAAAGTGCAAAGGTTTATGAGAAAC...TATCCACTCTGTGTGCCAAAACCAATCATGCCTTTCACGGCCCTTTAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGACAGTGGCACAGTAGATaGTCAAGGAAAACAACAGGA +
Preference number: 5 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGQWHSR*SRKTTG
Trigger: TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTG...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAGCATCAAGGTGATCGCTTCCTGAACATGTTCATTGACCATGAGGAGCTGTTTCCGTTAGTTTATCCATaGGTGTATATCACAACAGAT +
Preference number: 5 (lower is better)
Translates to: KHQGDRFLNMFIDHEELFPLVYP*VYITTD
Trigger: ATCTGTTGTGATATACACCAATGGATAAACTAACGG...AAACAGCTCCTCATGGTCAATGAACATGTTCAGGAAGCGATCACCTTGATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGAAGACGTGCCCTTTGTaGGGGATATTTAGATATATA +
Preference number: 5 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLKTCPL*GIFRYI
Trigger: TATATATCTAAATATCCCCAACAAAGGGCACGTCTT...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AATTATATGCTGGTAAGCCTAAACTGGCAGATTGGGCCATTTTTCCTGTGGTTGGACATGATGTCTCTTTaGAAAGAAATGACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: NYMLVSLNWQIGPFFLWLDMMSL*KEMTLL
Trigger: CAGCAAAGTCATTTCTTTCAAAAGAGACATCATGTC...CAACCACAGGAAAAATGGCCCAATCTGCCAGTTTAGGCTTACCAGCATATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp AAACAAGAGTTAGTAGCACAGTGGCACAGTAGATTGTCAAGGAAAACAACAGGAAAGACGTGCCCTTTGTaGGGGATATTTAGATATATA +
Preference number: 5 (lower is better)
Translates to: KQELVAQWHSRLSRKTTGKTCPL*GIFRYI
Trigger: TATATATCTAAATATCCCCAACAAAGGGCACGTCTT...TCCTGTTGTTTTCCTTGACAATCTACTGTGCCACTGTGCTACTAACTCTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATGTTGTATTTGAGATGTaGAGCTCTCACAGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYVVFEM*SSHREN
Trigger: ATTCTCCCTGTGAGAGCTCAACATCTCAAATACAAC...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATCTCCGCCATCTAAAGTaGCATTTTCATCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYLRHLK*HFHLSS
Trigger: AGATGAAAGATGAAAATGCAACTTTAGATGGCGGAG...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS-3UTR CAA 90 bp TTTGTTAACTTGGGCATGTGGCTAACATTCGTTCTCTCTCTGGTAAAAAGATATTTTTTCTTTGTTAACTaGGGCATGTGGCTAACATTC +
Preference number: 5 (lower is better)
Translates to: FVNLGMWLTFVLSLVKRYFFFVN*GMWLTF
Trigger: GAATGTTAGCCACATGCCCAAGTTAACAAAGAAAAA...ATATCTTTTTACCAGAGAGAGAACGAATGTTAGCCACATGCCCAAGTTAACAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000284031.13
ENST00000426972.8
CDS CCA 72 bp ACCACGGCGTGGGTGGCCCGGCCGAAGGCGGCGGGGTaGCCGAGCCCGGCCATGGCTTCGGGAGGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: TTAWVARPKAAG*PSPAMASGGLG
Trigger: CCCTAAGCCTCCCGAAGCCATGGCCGGGCTCGGCCACCCCGCCGCCTTCGGCCGGGCCACCCACGCCGTGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 72 bp GCCGTTCCGCGCGGGCGACGTCCACCTCCTCGCCCTTaGCGCTTCTCAGCGCGTGCTGGCCGAGCGACTCGG +
Preference number: 6 (lower is better)
Translates to: AVPRGRRPPPRP*RFSARAGRATR
Trigger: CCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCGCGCGGAACGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 72 bp TCCACCTCCTCGCCCTTGGCGCTTCTCAGCGCGTGCTaGCCGAGCGACTCGGGTAGCGCCCGCACCACGGCG +
Preference number: 6 (lower is better)
Translates to: STSSPLALLSAC*PSDSGSARTTA
Trigger: CGCCGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CAA 72 bp TGCCGTTCCGCGCGGGCGACGTCCACCTCCTCGCCCTaGGCGCTTCTCAGCGCGTGCTGGCCGAGCGACTCG +
Preference number: 6 (lower is better)
Translates to: CRSARATSTSSP*ALLSACWPSDS
Trigger: CGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCGCGCGGAACGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CAA 90 bp AGCTGGTGCTGCCGTTCCGCGCGGGCGACGTCCACCTCCTCGCCCTaGGCGCTTCTCAGCGCGTGCTGGCCGAGCGACTCGGGTAGCGCC +
Preference number: 6 (lower is better)
Translates to: SWCCRSARATSTSSP*ALLSACWPSDSGSA
Trigger: GGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGTCGCCCGCGCGGAACGGCAGCACCAGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS GCA 72 bp ACGTCCACCTCCTCGCCCTTGGCGCTTCTCAGCGCGTaGTGGCCGAGCGACTCGGGTAGCGCCCGCACCACG +
Preference number: 6 (lower is better)
Translates to: TSTSSPLALLSA*WPSDSGSARTT
Trigger: CGTGGTGCGGGCGCTACCCGAGTCGCTCGGCCAGCACGCGCTGAGAAGCGCCAAGGGCGAGGAGGTGGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284031.13
CDS CCA 72 bp GCTCCCAGCGGAGGCGGCGAGAAGGCGACGGGAGGCTaGGGTTTCTGGACGGTCTTTGGGCAGGACTTGAGG +
Preference number: 6 (lower is better)
Translates to: APSGGGEKATGG*GFWTVFGQDLR
Trigger: CCTCAAGTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCCCGTCGCCTTCTCGCCGCCTCCGCTGGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS GCA 72 bp CACATTTCGCCTCCTGTCCGTCAACTTGGACTGATCTaGGGCTCCCAGCGGAGGCGGCGAGAAGGCGACGGG +
Preference number: 6 (lower is better)
Translates to: HISPPVRQLGLI*GSQRRRREGDG
Trigger: CCCGTCGCCTTCTCGCCGCCTCCGCTGGGAGCCGCAGATCAGTCCAAGTTGACGGACAGGAGGCGAAATGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS TCA 72 bp ATTTGCACATTTCGCCTCCTGTCCGTCAACTTGGACTaGTCTGCGGCTCCCAGCGGAGGCGGCGAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: ICTFRLLSVNLD*SAAPSGGGEKA
Trigger: CGCCTTCTCGCCGCCTCCGCTGGGAGCCGCAGATCAGTCCAAGTTGACGGACAGGAGGCGAAATGTGCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS CCA 72 bp GAAGGCGACGGGAGGCTGGGGTTTCTGGACGGTCTTTaGGCAGGACTTGAGGAGCCGCTGTTTCTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: EGDGRLGFLDGL*AGLEEPLFLLP
Trigger: AGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCCCGTCGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS CAA 72 bp GGAGGCTGGGGTTTCTGGACGGTCTTTGGGCAGGACTaGAGGAGCCGCTGTTTCTCTTGCCTAATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GGWGFWTVFGQD*RSRCFSCLMSS
Trigger: CGACGACATTAGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS CAA 90 bp AAGGCGACGGGAGGCTGGGGTTTCTGGACGGTCTTTGGGCAGGACTaGAGGAGCCGCTGTTTCTCTTGCCTAATGTCGTCGATTACTAGC +
Preference number: 6 (lower is better)
Translates to: KATGGWGFWTVFGQD*RSRCFSCLMSSITS
Trigger: GCTAGTAATCGACGACATTAGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGACCGTCCAGAAACCCCAGCCTCCCGTCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS GCA 72 bp GTCTTTGGGCAGGACTTGAGGAGCCGCTGTTTCTCTTaGCTAATGTCGTCGATTACTAGCAGGCGCAACAGC +
Preference number: 6 (lower is better)
Translates to: VFGQDLRSRCFS*LMSSITSRRNS
Trigger: GCTGTTGCGCCTGCTAGTAATCGACGACATTAGGCAAGAGAAACAGCGGCTCCTCAAGTCCTGCCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426972.8
CDS GCA 72 bp CTTAAGGGCCTTCTGTGCAGATTCACTAGACCCAATTaGGATCAGGTTAGGCCCAGCCATGCTGCAGAAACT +
Preference number: 6 (lower is better)
Translates to: LKGLLCRFTRPN*DQVRPSHAAET
Trigger: AGTTTCTGCAGCATGGCTGGGCCTAACCTGATCGCAATTGGGTCTAGTGAATCTGCACAGAAGGCCCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS GCA 72 bp ACCTTTGCACTTTCTGGATACTCTTCCGGGGTTCGGTaGAGCAAGACGTGCCCTTTGTTGGGGATATTTAGA +
Preference number: 6 (lower is better)
Translates to: TFALSGYSSGVR*SKTCPLLGIFR
Trigger: TCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTATCCAGAAAGTGCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS GCA 72 bp AGCCATGCTGCAGAAACTCTTCAAATGCAACCCATCTaGCACTGGCACTGTGGAGACTGCATAGTCCTTAAA +
Preference number: 6 (lower is better)
Translates to: SHAAETLQMQPI*HWHCGDCIVLK
Trigger: TTTAAGGACTATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTGCAGCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CAA 90 bp TCTGGATACTCTTCCGGGGTTCGGTGCAGCAAGACGTGCCCTTTGTaGGGGATATTTAGATATATACAGTTTGCTGCTATGTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: SGYSSGVRCSKTCPL*GIFRYIQFAAMSSG
Trigger: GCCTGATGACATAGCAGCAAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS GCA 72 bp GTCACTCATCTGTTGCATGATCTTAAGGGCCTTCTGTaGAGATTCACTAGACCCAATTGCGATCAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: VTHLLHDLKGLL*RFTRPNCDQVR
Trigger: CCTAACCTGATCGCAATTGGGTCTAGTGAATCTGCACAGAAGGCCCTTAAGATCATGCAACAGATGAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CCA 72 bp GCTGCAGAAACTCTTCAAATGCAACCCATCTGCCACTaGCACTGTGGAGACTGCATAGTCCTTAAAAGTATC +
Preference number: 6 (lower is better)
Translates to: AAETLQMQPICH*HCGDCIVLKSI
Trigger: GATACTTTTAAGGACTATGCAGTCTCCACAGTGCCAGTGGCAGATGGGTTGCATTTGAAGAGTTTCTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CAA 72 bp TCTTCCGGGGTTCGGTGCAGCAAGACGTGCCCTTTGTaGGGGATATTTAGATATATACAGTTTGCTGCTATG +
Preference number: 6 (lower is better)
Translates to: SSGVRCSKTCPL*GIFRYIQFAAM
Trigger: CATAGCAGCAAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CAA 72 bp TACTCTTCCGGGGTTCGGTGCAGCAAGACGTGCCCTTaGTTGGGGATATTTAGATATATACAGTTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: YSSGVRCSKTCP*LGIFRYIQFAA
Trigger: AGCAGCAAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CAA 90 bp CTTTCTGGATACTCTTCCGGGGTTCGGTGCAGCAAGACGTGCCCTTaGTTGGGGATATTTAGATATATACAGTTTGCTGCTATGTCATCA +
Preference number: 6 (lower is better)
Translates to: LSGYSSGVRCSKTCP*LGIFRYIQFAAMSS
Trigger: TGATGACATAGCAGCAAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTATCCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS TCA 72 bp GATATATACAGTTTGCTGCTATGTCATCAGGCACAGTaGGTTTGTCGTAGCGGTGGTCACTCATCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: DIYSLLLCHQAQ*VCRSGGHSSVA
Trigger: TGCAACAGATGAGTGACCACCGCTACGACAAACTCACTGTGCCTGATGACATAGCAGCAAACTGTATATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS GCA 72 bp TCTGGATACTCTTCCGGGGTTCGGTGCAGCAAGACGTaGCCTTTGTTGGGGATATTTAGATATATACAGTTT +
Preference number: 6 (lower is better)
Translates to: SGYSSGVRCSKT*PLLGIFRYIQF
Trigger: AAACTGTATATATCTAAATATCCCCAACAAAGGGCACGTCTTGCTGCACCGAACCCCGGAAGAGTATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284031.13
ENST00000426972.8
ENST00000633113.1
CDS CCA 72 bp GCTGACTGCCATCAAATTGCCATCCAGAACTGCTTTTaGGAAGCAGTTCCTCCGCAATCTTTTCAACAGATT +
Preference number: 6 (lower is better)
Translates to: ADCHQIAIQNCF*EAVPPQSFQQI
Trigger: AATCTGTTGAAAAGATTGCGGAGGAACTGCTTCCCAAAAGCAGTTCTGGATGGCAATTTGATGGCAGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633113.1