RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCUN1D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000150401

Ensembl transcript IDs: ENST00000332592.7, ENST00000375403.6, ENST00000438545.6, ENST00000439909.2, ENST00000460318.1, ENST00000465710.1, ENST00000465938.5, ENST00000478244.6, ENST00000496873.1

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTaGCGCGCGAGCTACGCAGCATGCTCTGCGGTCCCACAGGCGGCG +
Preference number: 1 (lower is better)
Translates to: HRNVIRRDAAGRWFA*RASYAACSAVPQAA
Trigger: CGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp CATGCCGTGTTGCCAGTGCCACCGCAACGTCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTGACGCGCGAGCTACGCAGCATGCTC +
Preference number: 1 (lower is better)
Translates to: HAVLPVPPQRHSAGR*RTLVRLTRELRSML
Trigger: GAGCATGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp GACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTCATTCGGCGGGACGCTGCCGGACGC +
Preference number: 1 (lower is better)
Translates to: DVYKNAAPCRGHMPC*QCHRNVIRRDAAGR
Trigger: GCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp AGCCGTGTCCCGAGGAACTTCCTGCGGTGTCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGC +
Preference number: 1 (lower is better)
Translates to: SRVPRNFLRCPQSSR*LSSGRMGWRLWFHG
Trigger: GCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGACACGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTC +
Preference number: 1 (lower is better)
Translates to: YKNAAPCRGHMPCCQ*HRNVIRRDAAGRWF
Trigger: GAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp CAAATCTCCAAACATCCCAAAGCAGCCGTGTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGG +
Preference number: 1 (lower is better)
Translates to: QISKHPKAAVSRGTS*GVHKAAAGCPPAEW
Trigger: CCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGACACGGCTGCTTTGGGATGTTTGGAGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp ACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATaGCGTGTTGCCAGTGCCACCGCAACGTCATTCGGCGGGACGCTG +
Preference number: 1 (lower is better)
Translates to: TALTCIKTQRPAEDT*RVASATATSFGGTL
Trigger: CAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAG +
Preference number: 1 (lower is better)
Translates to: PLAVLRQNGMAPLVS*LVKNDFWNQRQCTQ
Trigger: CTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp TGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAAC +
Preference number: 1 (lower is better)
Translates to: WLSSGRMGWRLWFHG*SRMTSGISDNAPRN
Trigger: GTTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp CAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAAT +
Preference number: 1 (lower is better)
Translates to: QSSRWLSSGRMGWRL*FHGWSRMTSGISDN
Trigger: ATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR TCA 90 bp CCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCAAGAATaGCTTCTGGAATCAGCGACAATGCACCCAGGAACTGACTGCAAT +
Preference number: 1 (lower is better)
Translates to: PAEWDGASGFMAGQE*LLESATMHPGTDCN
Trigger: ATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp GGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACGTCATT +
Preference number: 1 (lower is better)
Translates to: GHILNSFDVYKNAAP*RGHMPCCQCHRNVI
Trigger: AATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp GTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGATaGTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTC +
Preference number: 1 (lower is better)
Translates to: VHFSFQMCTGAQRSG*WALRVPQEDGKNQL
Trigger: GAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 90 bp GGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATGGTaGAAGGACAGACTTCAGCTCACCAATCAGATGAAGGTTTTGGGG +
Preference number: 1 (lower is better)
Translates to: GPPQPGGHEKQMITW*KDRLQLTNQMKVLG
Trigger: CCCCAAAACCTTCATCTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp CATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGATGCTaGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATT +
Preference number: 1 (lower is better)
Translates to: HFSFQMCTGAQRSGC*ALRVPQEDGKNQLI
Trigger: AATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 90 bp GTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATaGTGCAAGGACAGACTTCAGCTCACCAATCAGATGAAGGTTTTG +
Preference number: 1 (lower is better)
Translates to: VGPPQPGGHEKQMIT*CKDRLQLTNQMKVL
Trigger: CAAAACCTTCATCTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATG +
Preference number: 2 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPPQSSR*LSSGRM
Trigger: CATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGG...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTC +
Preference number: 2 (lower is better)
Translates to: PLAVLRQNGMAPLVSWLVGHMPC*QCHRNV
Trigger: GACGTTGCGGTGGCACTGGCAACACGGCATGTGTCC...GACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCAGCAAGGCACGCCTGTaGCATGAGAGTCTCGGCACG +
Preference number: 2 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASSKARL*HESLGT
Trigger: CGTGCCGAGACTCTCATGTCACAGGCGTGCCTTGCT...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGT +
Preference number: 2 (lower is better)
Translates to: PLAVLRQNGMAPLVSWLVKNAAP*RGHMPC
Trigger: ACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT...GACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGGACGCTGGTTCGCCTaGCGCGCGAGCTACGCAGCA +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSGRWFA*RASYAA
Trigger: TGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCC...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACAGCGAGCTACGCAGCATaGTCTGCGGTCCCACAGGCG +
Preference number: 2 (lower is better)
Translates to: AALVGPPQPGGHEKQMITASYAA*SAVPQA
Trigger: CGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGC...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGG +
Preference number: 2 (lower is better)
Translates to: KNAAPCRGHMPCCQCHRNMPCCQ*HRNVIR
Trigger: CCGAATGACGTTGCGGTGGCACTGGCAACACGGCAT...GTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATG +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSPQSSR*LSSGRM
Trigger: CATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGG...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCAGAAGCCAACCCAGCTaGTTGTCTGGGCCATGCTCT +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSRSQPS*LSGPCS
Trigger: AGAGCATGGCCCAGACAAGCAGCTGGGTTGGCTTCT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTGGGCCAGGCGGGGTCTaGAGGCTGCAGGTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPGPGGV*RLQVPS
Trigger: GGAAGGGACCTGCAGCCTGCAGACCCCGCCTGGCCC...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: IKTQRPAEDTCRVASATANAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGGCACGCCTGTGACATaGGAGTCTCGGCACGTGAGG +
Preference number: 2 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFGTPVT*ESRHVR
Trigger: CCTCACGTGCCGAGACTCTCATGTCACAGGCGTGCC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCCACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 2 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCTGGAATCAGCGACAATaGACCCAGGAACTGACTGCA +
Preference number: 2 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASWNQRQ*TQELTA
Trigger: TGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCA...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 2 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCTTCAAGCGAATCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSFKRIS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGATTCGCTTGAA...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGA +
Preference number: 2 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRMGWRL*FHGWSR
Trigger: TCTTGACCAGCCATGAAACCAGAGGCGCCATCCCAT...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACCCACAGGCGGCGCTATaGCTCTACCTTAGTATTTTG +
Preference number: 2 (lower is better)
Translates to: KNAAPCRGHMPCCQCHRNPQAAL*LYLSIL
Trigger: CAAAATACTAAGGTAGAGCCATAGCGCCGCCTGTGG...GTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGGCAGCAGCTCCAGCTaGTCCACGTCCTGCACAGTG +
Preference number: 2 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFGSSSS*STSCTV
Trigger: CACTGTGCAGGACGTGGACCAGCTGGAGCTGCTGCC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGTGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSCPPAE*DGASGF
Trigger: GAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACA...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACAAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: AALVGPPQPGGHEKQMITNAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCAGCTCACCAATCAGATaGAGGTTTTGGGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSSSPIR*RFWGWV
Trigger: AACCCAACCCCAAAACCTTCATCTGATTGGTGAGCT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTGCGAGCTACGCAGCATaGTCTGCGGTCCCACAGGCG +
Preference number: 2 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCASYAA*SAVPQA
Trigger: CGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGC...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCTGCTTGTCTGGGCCATaGTCTCTCACACCGCAGCTA +
Preference number: 2 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSACLSGP*SLTPQL
Trigger: TAGCTGCGGTGTGAGAGAGCATGGCCCAGACAAGCA...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCATGCTTGTCTGGGCCATaGTCTCTCACACCGCAGCTA +
Preference number: 2 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPCLSGP*SLTPQL
Trigger: TAGCTGCGGTGTGAGAGAGCATGGCCCAGACAAGCA...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAGGAAGGTCTGTCACTTaGCCATCACTGGACCAGCCA +
Preference number: 2 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPGRSVT*PSLDQP
Trigger: TGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCC...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCGGTACCACAAGAGGATaGAAAGAACCAGCTCATTCG +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSGTTRG*KEPAHS
Trigger: CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATGCGTTTTCCACCTGTaGCTACTGGCCGTGCATATT +
Preference number: 2 (lower is better)
Translates to: AALVGPPQPGGHEKQMITCVFHL*LLAVHI
Trigger: AATATGCACGGCCAGTAGTCACAGGTGGAAAACGCA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
3UTR-3UTR GCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACACACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 2 (lower is better)
Translates to: AALVGPPQPGGHEKQMITHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: INSAGIVPRVPLLCKATWSRGTS*GVHKAA
Trigger: GGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGA...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 2 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCTGCCACGTGTGCCGTTaGTATGCAAAGCTACATGGG +
Preference number: 2 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSACHVCR*YAKLHG
Trigger: CCCATGTAGCTTTGCATAGCAACGGCACACGTGGCA...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPTLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSTLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: KQSLGKVCHLPITGPARSLWFHG*SRMTSG
Trigger: TCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAG...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCACTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: IKTQRPAEDTCRVASATALWFHG*SRMTSG
Trigger: TCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAG...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGA +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSMGWRL*FHGWSR
Trigger: TCTTGACCAGCCATGAAACCAGAGGCGCCATCCCAT...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTGGACGCTGGTTCGCCTaGCGCGCGAGCTACGCAGCA +
Preference number: 2 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCGRWFA*RASYAA
Trigger: TGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCC...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCCACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 2 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMSRGTS*GVHKAA
Trigger: GGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGA...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 2 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGG +
Preference number: 2 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMMPCCQ*HRNVIR
Trigger: CCGAATGACGTTGCGGTGGCACTGGCAACACGGCAT...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTC +
Preference number: 2 (lower is better)
Translates to: SSPLGHILNSFDVYKNAAGHMPC*QCHRNV
Trigger: GACGTTGCGGTGGCACTGGCAACACGGCATGTGTCC...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGTCGTCCAGGCTGGAGTaGAGTGGCGCGATCTCGACT +
Preference number: 2 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQSSRLE*SGAIST
Trigger: AGTCGAGATCGCGCCACTGCACTCCAGCCTGGACGA...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTC +
Preference number: 2 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPAPLVS*LVKNDF
Trigger: GAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGC...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGCCACAGGCGGCGCTATaGCTCTACCTTAGTATTTTG +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSPQAAL*LYLSIL
Trigger: CAAAATACTAAGGTAGAGCCATAGCGCCGCCTGTGG...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTTCACTTGCCCATCACTaGACCAGCCAGAAGCCAGCG +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPSLAHH*TSQKPA
Trigger: CGCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGA...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTTCGTCCAGGCTGGAGTaGAGTGGCGCGATCTCGACT +
Preference number: 2 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSSSRLE*SGAIST
Trigger: AGTCGAGATCGCGCCACTGCACTCCAGCCTGGACGA...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATTGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNCPPAE*DGASGF
Trigger: GAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACA...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 2 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPNAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTC +
Preference number: 2 (lower is better)
Translates to: INSAGIVPRVPLLCKATWAPLVS*LVKNDF
Trigger: GAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGC...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGTAAGAGAGGCCCAGTaGTATATAAACGGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFVREAQ*YINGVR
Trigger: TCTCACACCGTTTATATATCACTGGGCCTCTCTTAC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 2 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
3UTR-3UTR GCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGCGTGTGCCGTTGCTATaGAAAGCTACATGGGGATTG +
Preference number: 2 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPRVPLL*KATWGL
Trigger: CAATCCCCATGTAGCTTTGCATAGCAACGGCACACG...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 2 (lower is better)
Translates to: QTTMYILASKCAQGHKGLTLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTCCACAGGCGGCGCTATaGCTCTACCTTAGTATTTTG +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPPQAAL*LYLSIL
Trigger: CAAAATACTAAGGTAGAGCCATAGCGCCGCCTGTGG...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGCGTGTGCCGTTGCTATaGAAAGCTACATGGGGATTG +
Preference number: 2 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQRVPLL*KATWGL
Trigger: CAATCCCCATGTAGCTTTGCATAGCAACGGCACACG...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 2 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGTAAGAGAGGCCCAGTaGTATATAAACGGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: QTTMYILASKCAQGHKGLVREAQ*YINGVR
Trigger: TCTCACACCGTTTATATATCACTGGGCCTCTCTTAC...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SSPLGHILNSFDVYKNAALWFHG*SRMTSG
Trigger: TCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAG...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTAGAATCCATGAAGCCTaGAAGATACGCTCACGTTTT +
Preference number: 2 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPRIHEA*KIRSRF
Trigger: AAAACGTGAGCGTATCTTCCAGGCTTCATGGATTCT...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR GCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTTGGAATCAGCGACAATaGACCCAGGAACTGACTGCA +
Preference number: 2 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCWNQRQ*TQELTA
Trigger: TGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCA...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGCTATGCAAAGCTACATaGGGATTGAGAACCATAAAA +
Preference number: 2 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMLCKAT*GLRTIK
Trigger: TTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAG...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CAA 90 bp TTCTGGAATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTaGCAGGATACAAATCATTTCATAATCTTACTCCTGCTTAACTTG +
Preference number: 2 (lower is better)
Translates to: FWNQRQCTQELTAIS*QDTNHFIILLLLNL
Trigger: CAAGTTAAGCAGGAGTAAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR TCA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 2 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
3UTR-3UTR GCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTTGTGACTACTGGCCGTaGATATTCTACAAAATCATC +
Preference number: 2 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLCDYWP*IFYKII
Trigger: GATGATTTTGTAGAATATGCACGGCCAGTAGTCACA...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
3UTR TCA 72 bp GTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTaGCGCGCGAGCTACGCAGCATGCTCTGCGGTCCCA +
Preference number: 3 (lower is better)
Translates to: VIRRDAAGRWFA*RASYAACSAVP
Trigger: TGGGACCGCAGAGCATGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp TTGCCAGTGCCACCGCAACGTCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTGACGCGCGAGCTACGC +
Preference number: 3 (lower is better)
Translates to: LPVPPQRHSAGR*RTLVRLTRELR
Trigger: GCGTAGCTCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp GCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGGCGGGACGCTGCCGGA +
Preference number: 3 (lower is better)
Translates to: AAPCRGHMPCCQ*HRNVIRRDAAG
Trigger: TCCGGCAGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp CCGAGGAACTTCCTGCGGTGTCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: PRNFLRCPQSSR*LSSGRMGWRLW
Trigger: CCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTCATTCGGCGGGACGCT +
Preference number: 3 (lower is better)
Translates to: KNAAPCRGHMPC*QCHRNVIRRDA
Trigger: AGCGTCCCGCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp AAACATCCCAAAGCAGCCGTGTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCG +
Preference number: 3 (lower is better)
Translates to: KHPKAAVSRGTS*GVHKAAAGCPP
Trigger: CGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGACACGGCTGCTTTGGGATGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCAGGACACATGCCGTGTaGCCAGTGCCACCGCAACGT +
Preference number: 3 (lower is better)
Translates to: KQSLGKVCHLPITGPARSRTHAV*PVPPQR
Trigger: ACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp GTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTCATGGCTGGTCAAGAA +
Preference number: 3 (lower is better)
Translates to: VHKAAAGCPPAE*DGASGFMAGQE
Trigger: TTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp ACTCAATACCAGCCCTCCACACCTCGGCAGCACTCGTaGGTCCTCCTCAACCAGGCGGACACGAGAAACAGA +
Preference number: 3 (lower is better)
Translates to: TQYQPSTPRQHS*VLLNQADTRNR
Trigger: TCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGCCGAGGTGTGGAGGGCTGGTATTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp ACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATaGCGTGTTGCCAGTGCCACCGCAACGTCATTCGGC +
Preference number: 3 (lower is better)
Translates to: TCIKTQRPAEDT*RVASATATSFG
Trigger: GCCGAATGACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp CGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGAATGACTTCTGGAATC +
Preference number: 3 (lower is better)
Translates to: RWLSSGRMGWRL*FHGWSRMTSGI
Trigger: GATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTAGGACACATGCCGTGTaGCCAGTGCCACCGCAACGT +
Preference number: 3 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFRTHAV*PVPPQR
Trigger: ACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCT...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGTTGCCAGTGCCACCGC +
Preference number: 3 (lower is better)
Translates to: LNSFDVYKNAAP*RGHMPCCQCHR
Trigger: GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACGGTTCCAGGTGTCCCTaGGAATTGATCTTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: KNAAPCRGHMPCCQCHRNGSRCP*ELIFCD
Trigger: ATCACAAAAGATCAATTCCAAGGGACACCTGGAACC...GTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375403.6
3UTR GCA 72 bp AGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGATaGTGGGCACTACGGGTACCACAAGAGGATGGAAAG +
Preference number: 3 (lower is better)
Translates to: SFQMCTGAQRSG*WALRVPQEDGK
Trigger: CTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCTGTGCACATTTGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp GTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTCTGGAATCAGCGACAA +
Preference number: 3 (lower is better)
Translates to: VLRQNGMAPLVS*LVKNDFWNQRQ
Trigger: TTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp TCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGAATCAGCGACAATGCA +
Preference number: 3 (lower is better)
Translates to: SGRMGWRLWFHG*SRMTSGISDNA
Trigger: TGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp TTCCAAATGTGCACAGGGGCACAAAGGTCTGGATGCTaGGCACTACGGGTACCACAAGAGGATGGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: FQMCTGAQRSGC*ALRVPQEDGKN
Trigger: GTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCTGTGCACATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTGTGCCACGTGTGCCGTaGCTATGCAAAGCTACATGG +
Preference number: 3 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPVPRVP*LCKATW
Trigger: CCATGTAGCTTTGCATAGCAACGGCACACGTGGCAC...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCGATACGCTCACGTTTTaGAGGTTTGTATTAATGCCA +
Preference number: 3 (lower is better)
Translates to: KQSLGKVCHLPITGPARSDTLTF*RFVLMP
Trigger: TGGCATTAATACAAACCTCAAAAACGTGAGCGTATC...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACACTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 3 (lower is better)
Translates to: AALVGPPQPGGHEKQMITLTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCACATTCTTAACAGCTTaGACGTGTATAAAAACGCAG +
Preference number: 3 (lower is better)
Translates to: KQSLGKVCHLPITGPARSTFLTA*TCIKTQ
Trigger: CTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACACCACCACGCCCGGCCTaGATTTTAAAATCTATAATT +
Preference number: 3 (lower is better)
Translates to: AALVGPPQPGGHEKQMITPPRPA*ILKSII
Trigger: AATTATAGATTTTAAAATCAAGGCCGGGCGTGGTGG...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp TGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATaGACCCAGGAACTGACTGCAATCTCCTTGCAGGAT +
Preference number: 3 (lower is better)
Translates to: WLVKNDFWNQRQ*TQELTAISLQD
Trigger: ATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp CCTCAACCAGGCGGACACGAGAAACAGATGATAACATaGTGCAAGGACAGACTTCAGCTCACCAATCAGATG +
Preference number: 3 (lower is better)
Translates to: PQPGGHEKQMIT*CKDRLQLTNQM
Trigger: CATCTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTCCACCACGCCCGGCCTaGATTTTAAAATCTATAATT +
Preference number: 3 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFPPRPA*ILKSII
Trigger: AATTATAGATTTTAAAATCAAGGCCGGGCGTGGTGG...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CCA 72 bp GTCTGGATGCTGGGCACTACGGGTACCACAAGAGGATaGAAAGAACCAGCTCATTCGGTTTTATTGTATGTA +
Preference number: 3 (lower is better)
Translates to: VWMLGTTGTTRG*KEPAHSVLLYV
Trigger: TACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGCTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 3 (lower is better)
Translates to: SSPLGHILNSFDVYKNAALTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR TCA 72 bp ATGACTTCTGGAATCAGCGACAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGGATACAAATCATTTCA +
Preference number: 3 (lower is better)
Translates to: MTSGISDNAPRN*LQSPCRIQIIS
Trigger: TGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTACATTCTTAACAGCTTaGACGTGTATAAAAACGCAG +
Preference number: 3 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPTFLTA*TCIKTQ
Trigger: CTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGT...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR GCA 72 bp CTTCTGGAATCAGCGACAATGCACCCAGGAACTGACTaGAATCTCCTTGCAGGATACAAATCATTTCATAAT +
Preference number: 3 (lower is better)
Translates to: LLESATMHPGTD*NLLAGYKSFHN
Trigger: ATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR-3UTR CAA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTCTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 3 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLLTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTGACGCGCGAGGGCCAGGCGGGGTCTaGAGGCTGCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TATSFGGTLPDAGSPDARGPGGV*RLQVPS
Trigger: GGAAGGGACCTGCAGCCTGCAGACCCCGCCTGGCCC...TCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTGCGAGCTACGCAGCATaGTCTGCGGTCCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPASYAA*SAVPQA
Trigger: CGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGC...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTGACGCGCGAAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TATSFGGTLPDAGSPDARKNAAP*RGHMPC
Trigger: ACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT...TCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCACATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: IKTQRPAEDTCRVASATAHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCCCTCGGCAGCACTCGTaGGTCCTCCTCAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASPRQHS*VLLNQA
Trigger: CGCCTGGTTGAGGAGGACCCACGAGTGCTGCCGAGG...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTGACGCGCGATGCGTTTTCCACCTGTaGCTACTGGCCGTGCATATT +
Preference number: 4 (lower is better)
Translates to: TATSFGGTLPDAGSPDARCVFHL*LLAVHI
Trigger: AATATGCACGGCCAGTAGTCACAGGTGGAAAACGCA...TCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCGCGAGCTACGCAGCATaGTCTGCGGTCCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSASYAA*SAVPQA
Trigger: CGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGC...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGGHMPC*QCHRNV
Trigger: GACGTTGCGGTGGCACTGGCAACACGGCATGTGTCC...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGPQSSR*LSSGRM
Trigger: CATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGG...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTGACGCGCGACCTTTAGCTTCTCCATaGTGTCACACCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TATSFGGTLPDAGSPDARPLASP*CHTQVL
Trigger: CAGAACTTGGGTGTGACAGCATGGAGAAGCTAAAGG...TCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAGGCAGCAGCTCCAGCTaGTCCACGTCCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: IKTQRPAEDTCRVASATAGSSSS*STSCTV
Trigger: CACTGTGCAGGACGTGGACCAGCTGGAGCTGCTGCC...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACCCACAGCGTTCCGCATaGACTCCCTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: KNAAPCRGHMPCCQCHRNPQRSA*TPCGAS
Trigger: ACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGG...GTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCGGACGCTGGTTCGCCTaGCGCGCGAGCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAGRWFA*RASYAA
Trigger: TGCTGCGTAGCTCGCGCGTCAGGCGAACCAGCGTCC...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAGCAAGGCACGCCTGTaGCATGAGAGTCTCGGCACG +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRSKARL*HESLGT
Trigger: CGTGCCGAGACTCTCATGTCACAGGCGTGCCTTGCT...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCAGCAAGGCACGCCTGTaGCATGAGAGTCTCGGCACG +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSSKARL*HESLGT
Trigger: CGTGCCGAGACTCTCATGTCACAGGCGTGCCTTGCT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCTCGTCCAGGCTGGAGTaGAGTGGCGCGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSSSRLE*SGAIST
Trigger: AGTCGAGATCGCGCCACTGCACTCCAGCCTGGACGA...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGGGCCAGGCGGGGTCTaGAGGCTGCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFGPGGV*RLQVPS
Trigger: GGAAGGGACCTGCAGCCTGCAGACCCCGCCTGGCCC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ACCGCAACGTCATTCGGCGGGACGCTGCCGGACGCTGGTTCGCCTGACGCGCGAGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TATSFGGTLPDAGSPDARGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...TCGCGCGTCAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATGACGTTGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCGAGAGTCTCGGCACGTaGGGTAGGGTCAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASESLGT*GRVNSD
Trigger: ATCACTGTTGACCCTACCTCACGTGCCGAGACTCTC...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAACGCACAAAGGTCTGGATaGTGGGCACTACGGGTACCA +
Preference number: 4 (lower is better)
Translates to: KNAAPCRGHMPCCQCHRNAQRSG*WALRVP
Trigger: TGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGC...GTTGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCATCCGGCAGAATGGGATaGCGCCTCTGGTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: IKTQRPAEDTCRVASATASGRMG*RLWFHG
Trigger: GCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGA...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCCTCGGCAGCACTCGTaGGTCCTCCTCAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCPRQHS*VLLNQA
Trigger: CGCCTGGTTGAGGAGGACCCACGAGTGCTGCCGAGG...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCCTGCTAAATTCACACTaGGTTGCTGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: PLAVLRQNGMAPLVSWLVLLNSH*VAALNF
Trigger: GAAGTTCAGGGCAGCAACTCAGTGTGAATTTAGCAG...GACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGCACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGT +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSKNAAP*RGHMPC
Trigger: ACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCGGAAGAAGCTGTCCGTaGCCTCGTCTAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSGRSCP*PRLVST
Trigger: AGTGGAGACTAGACGAGGCCACGGACAGCTTCTTCC...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCGTAACCTCCGTCTCCTaGGTTCAAGCGAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRVTSVS*VQANLL
Trigger: CAGGAGATTCGCTTGAACTCAGGAGACGGAGGTTAC...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGCGGACCTTGTCCTTCTaGGACGATTTAAGCTTATGC +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGRTLSF*DDLSLC
Trigger: GCATAAGCTTAAATCGTCTCAGAAGGACAAGGTCCG...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCGTGTCCTTCAGCTCCTaGTCCAGTCTTGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRVSFSS*SSLGRR
Trigger: TCTTCTGCCAAGACTGGAGCAGGAGCTGAAGGACAC...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCTCGTCCAGGCTGGAGTaGAGTGGCGCGATCTCGACT +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCSSRLE*SGAIST
Trigger: AGTCGAGATCGCGCCACTGCACTCCAGCCTGGACGA...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATGGGCCAGGCGGGGTCTaGAGGCTGCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNGPGGV*RLQVPS
Trigger: GGAAGGGACCTGCAGCCTGCAGACCCCGCCTGGCCC...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAAAGGTCTGGATGCTaGGCACTACGGGTACCACAA +
Preference number: 4 (lower is better)
Translates to: KQSLGKVCHLPITGPARSQRSGC*ALRVPQ
Trigger: TTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTG...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCTTCCCATTAGAGTTCTaGAAGCAGAGCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASFPLEF*KQSLGK
Trigger: CTTCCCCAGGCTCTGCTTCCAGAACTCTAATGGGAA...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTAGAATCCATGAAGCCTaGAAGATACGCTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPRIHEA*KIRSRF
Trigger: AAAACGTGAGCGTATCTTCCAGGCTTCATGGATTCT...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGCTACGCAGCATGCTCTaGGGTCCCACAGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPLRSML*GPTGGA
Trigger: AGCGCCGCCTGTGGGACCGCAGAGCATGCTGCGTAG...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCCGTGTGCCGTTGCTATaGAAAGCTACATGGGGATTG +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRRVPLL*KATWGL
Trigger: CAATCCCCATGTAGCTTTGCATAGCAACGGCACACG...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGTCCGGCAGAATGGGATaGCGCCTCTGGTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSSGRMG*RLWFHG
Trigger: GCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGA...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAACCCAGCTGCTTGTCTaGGCCATGCTCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPTQLLV*AMLSHT
Trigger: GGTGTGAGAGAGCATGGCCCAGACAAGCAGCTGGGT...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCACGGACCTTGTCCTTCTaGGACGATTTAAGCTTATGC +
Preference number: 4 (lower is better)
Translates to: IKTQRPAEDTCRVASATARTLSF*DDLSLC
Trigger: GCATAAGCTTAAATCGTCTCAGAAGGACAAGGTCCG...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCTCCTGCTTAACTTGCTaGCTAGAAAAGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASSCLTC*LEKAAF
Trigger: AAACGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGA...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATGCGAGCTACGCAGCATaGTCTGCGGTCCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNASYAA*SAVPQA
Trigger: CGCCTGTGGGACCGCAGAGCATGCTGCGTAGCTCGC...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAAAAACGCAGCGCCCTaGAGAGGACACATGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPKNAAP*RGHMPC
Trigger: ACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTT...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCGCACAAAGGTCTGGATaGTGGGCACTACGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCAQRSG*WALRVP
Trigger: TGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGC...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCTGCTTGTCTGGGCCATaGTCTCTCACACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCCLSGP*SLTPQL
Trigger: TAGCTGCGGTGTGAGAGAGCATGGCCCAGACAAGCA...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCAGAAGCCAACCCAGCTaGTTGTCTGGGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSARSQPS*LSGPCS
Trigger: AGAGCATGGCCCAGACAAGCAGCTGGGTTGGCTTCT...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWPQSSR*LSSGRM
Trigger: CATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGG...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTATGCAAAGCTACATaGGGATTGAGAACCATAAAA +
Preference number: 4 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPLCKAT*GLRTIK
Trigger: TTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAG...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCCTCGGCAGCACTCGTaGGTCCTCCTCAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: NQRQCTQELTAISLQDTNPRQHS*VLLNQA
Trigger: CGCCTGGTTGAGGAGGACCCACGAGTGCTGCCGAGG...ATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGACCCAGCTGCTTGTCTaGGCCATGCTCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPTQLLV*AMLSHT
Trigger: GGTGTGAGAGAGCATGGCCCAGACAAGCAGCTGGGT...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGTCACTTGCCCATCACTaGACCAGCCAGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: IIRNHVSKVQQEVPGVPWSLAHH*TSQKPA
Trigger: CGCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGA...CCAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGAGAATCCATGAAGCCTaGAAGATACGCTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGRIHEA*KIRSRF
Trigger: AAAACGTGAGCGTATCTTCCAGGCTTCATGGATTCT...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACACCTGTGGAGCGAGTCTaGGTTTTGGAAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITPVERV*VLEEAV
Trigger: GACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGG...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTCGCATGGACTCCCTGTaGAGCGAGTCTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFRMDSL*SESGFW
Trigger: CCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCG...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGCGCATGGACTCCCTGTaGAGCGAGTCTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPRMDSL*SESGFW
Trigger: CCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCG...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCCCGCGCAGCTCGCTaGGCTCGGCCTCCCACATCC +
Preference number: 4 (lower is better)
Translates to: FQITLISNTQQPFLSRWDPRAAR*ARPPTS
Trigger: GGATGTGGGAGGCCGAGCCCAGCGAGCTGCGCGGGG...GTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438545.6
CDS-3UTR TCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPNAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAGTAACCTCCGTCTCCTaGGTTCAAGCGAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPVTSVS*VQANLL
Trigger: CAGGAGATTCGCTTGAACTCAGGAGACGGAGGTTAC...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGGAGAGTCTCGGCACGTaGGGTAGGGTCAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: IIRNHVSKVQQEVPGVPWESLGT*GRVNSD
Trigger: ATCACTGTTGACCCTACCTCACGTGCCGAGACTCTC...CCAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR TCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATGGCACGCCTGTGACATaGGAGTCTCGGCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNGTPVT*ESRHVR
Trigger: CCTCACGTGCCGAGACTCTCATGTCACAGGCGTGCC...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCCCTTTAGCTTCTCCATaGTGTCACACCATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAPLASP*CHTISP
Trigger: GGGGGAGATGGTGTGACAGCATGGAGAAGCTAAAGG...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332592.7
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSATLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTTGCTTGTCTGGGCCATaGTCTCTCACACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFCLSGP*SLTPQL
Trigger: TAGCTGCGGTGTGAGAGAGCATGGCCCAGACAAGCA...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCTCCACCTGTGACTACTaGCCGTGCATATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRSTCDY*PCIFYK
Trigger: TTTGTAGAATATGCACGGCCAGTAGTCACAGGTGGA...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACACCACAGGCGGCGCTATaGCTCTACCTTAGTATTTTG +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITPQAAL*LYLSIL
Trigger: CAAAATACTAAGGTAGAGCCATAGCGCCGCCTGTGG...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATTCCCATTAGAGTTCTaGAAGCAGAGCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITFPLEF*KQSLGK
Trigger: CTTCCCCAGGCTCTGCTTCCAGAACTCTAATGGGAA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGCCTGTGGAGCGAGTCTaGGTTTTGGAAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSPVERV*VLEEAV
Trigger: GACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGG...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGGTTCTCTCGCCAGCCTaGGTGCACGCCATAAACTGG +
Preference number: 4 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMVLSPA*VHAINW
Trigger: CCAGTTTATGGCGTGCACTCAGGCTGGCGAGAGAAC...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGTGGAATCAGCGACAATaGACCCAGGAACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSWNQRQ*TQELTA
Trigger: TGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCA...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPSRGTS*GVHKAA
Trigger: GGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGA...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGCATTCGGCGGGACGCTaGCGGACGCTGGTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: TFQITLISNTQQPFLSRWHSAGR*RTLVRL
Trigger: CAGGCGAACCAGCGTCCGGCAGCGTCCCGCCGAATG...CCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: QTTMYILASKCAQGHKGLGHMPC*QCHRNV
Trigger: GACGTTGCGGTGGCACTGGCAACACGGCATGTGTCC...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCACGTGTGCCGTTGCTATaGAAAGCTACATGGGGATTG +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPRVPLL*KATWGL
Trigger: CAATCCCCATGTAGCTTTGCATAGCAACGGCACACG...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGCCACGTGTGCCGTTaGTATGCAAAGCTACATGGG +
Preference number: 4 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPCHVCR*YAKLHG
Trigger: CCCATGTAGCTTTGCATAGCAACGGCACACGTGGCA...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCGAATCGTGCCACGTGTaGCGTTGCTATGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAESCHV*RCYAKL
Trigger: TAGCTTTGCATAGCAACGGCACACGTGGCACGATTC...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGAATCGTGCCACGTGTaGCGTTGCTATGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSESCHV*RCYAKL
Trigger: TAGCTTTGCATAGCAACGGCACACGTGGCACGATTC...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGCACAAAGGTCTGGATaGTGGGCACTACGGGTACCA +
Preference number: 4 (lower is better)
Translates to: YHPQSCFQSPAGGSRCPLAQRSG*WALRVP
Trigger: TGGTACCCGTAGTGCCCAGCATCCAGACCTTTGTGC...CAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp TATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGTGCTTGTCTGGGCCATaGTCTCTCACACCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: YHPQSCFQSPAGGSRCPLCLSGP*SLTPQL
Trigger: TAGCTGCGGTGTGAGAGAGCATGGCCCAGACAAGCA...CAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGAAGGTCTGTCACTTaGCCATCACTGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWGRSVT*PSLDQP
Trigger: TGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCC...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGTGGATCTTTGTACCTaGCGTACAGCCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWVDLCT*RTAAPA
Trigger: AGCTGGAGCGGCTGTACGGCAGGTACAAAGATCCAC...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAATGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VSWLVKNDFWNQRQCTQECPPAE*DGASGF
Trigger: GAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACA...TTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGAGGGGCACAAAGGTCTaGATGCTGGGCACTACGGGT +
Preference number: 4 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMRGTKV*MLGTTG
Trigger: ACCCGTAGTGCCCAGCATCCAGACCTTTGTGCCCCT...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGTCACTTGCCCATCACTaGACCAGCCAGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMSLAHH*TSQKPA
Trigger: CGCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGA...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGAAGAAGCTGTCCGTaGCCTCGTCTAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWGRSCP*PRLVST
Trigger: AGTGGAGACTAGACGAGGCCACGGACAGCTTCTTCC...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCCACAGCGTTCCGCATaGACTCCCTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: NQRQCTQELTAISLQDTNPQRSA*TPCGAS
Trigger: ACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGG...ATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTGAGAGTCTCGGCACGTaGGGTAGGGTCAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPESLGT*GRVNSD
Trigger: ATCACTGTTGACCCTACCTCACGTGCCGAGACTCTC...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATCCTGCTTAACTTGCTaGCTAGAAAAGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITSCLTC*LEKAAF
Trigger: AAACGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCTACTCCTGCTTAACTTaGTGCCTAGAAAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAYSCLT*CLEKAA
Trigger: CGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGAGTA...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGGAATCAGCGACAATaGACCCAGGAACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPWNQRQ*TQELTA
Trigger: TGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCA...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNSRGTS*GVHKAA
Trigger: GGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGA...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGG +
Preference number: 4 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCMPCCQ*HRNVIR
Trigger: CCGAATGACGTTGCGGTGGCACTGGCAACACGGCAT...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAATGCGGACACATGCCGTGTTaGCAGTGCCACCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: NFQYATAISKSMGPAVKCGHMPC*QCHRNV
Trigger: GACGTTGCGGTGGCACTGGCAACACGGCATGTGTCC...GCATTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGGAAGGTCTGTCACTTaGCCATCACTGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPGRSVT*PSLDQP
Trigger: TGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGTGGATCTTTGTACCTaGCGTACAGCCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPVDLCT*RTAAPA
Trigger: AGCTGGAGCGGCTGTACGGCAGGTACAAAGATCCAC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATCCACCTGTGACTACTaGCCGTGCATATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITSTCDY*PCIFYK
Trigger: TTTGTAGAATATGCACGGCCAGTAGTCACAGGTGGA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATACCCAGCTGCTTGTCTaGGCCATGCTCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: NQRQCTQELTAISLQDTNTQLLV*AMLSHT
Trigger: GGTGTGAGAGAGCATGGCCCAGACAAGCAGCTGGGT...ATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAAAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSWLVKNDFWNQRQCTQENAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...TTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTAGCTCACCAATCAGATaGAGGTTTTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFSSPIR*RFWGWV
Trigger: AACCCAACCCCAAAACCTTCATCTGATTGGTGAGCT...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTGGCACGCCTGTGACATaGGAGTCTCGGCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLGTPVT*ESRHVR
Trigger: CCTCACGTGCCGAGACTCTCATGTCACAGGCGTGCC...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGGCACGCCTGTGACATaGGAGTCTCGGCACGTGAGG +
Preference number: 4 (lower is better)
Translates to: TFQITLISNTQQPFLSRWGTPVT*ESRHVR
Trigger: CCTCACGTGCCGAGACTCTCATGTCACAGGCGTGCC...CCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGAAGTCTAAACCTTTCTaGCCTGGGTTCTTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSKSKPF*PGFLAK
Trigger: CTTCGCTAAGAACCCAGGGCAGAAAGGTTTAGACTT...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332592.7
ENST00000478244.6
CDS-3UTR GCA 90 bp CCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCTCCCGAGGAACTTCCTaGGGTGTCCACAAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PDNTNFQYATAISKSMGPSRGTS*GVHKAA
Trigger: GGCTGCTTTGTGGACACCGCAGGAAGTTCCTCGGGA...GGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp GTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAATGCCACGTGTGCCGTTaGTATGCAAAGCTACATGGG +
Preference number: 4 (lower is better)
Translates to: VSWLVKNDFWNQRQCTQECHVCR*YAKLHG
Trigger: CCCATGTAGCTTTGCATAGCAACGGCACACGTGGCA...TTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTTGCCACGTGTGCCGTTaGTATGCAAAGCTACATGGG +
Preference number: 4 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPCHVCR*YAKLHG
Trigger: CCCATGTAGCTTTGCATAGCAACGGCACACGTGGCA...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAAACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VSWLVKNDFWNQRQCTQETLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...TTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGAGAAGCCAACCCAGCTaGTTGTCTGGGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSPLGHILNSFDVYKNAARSQPS*LSGPCS
Trigger: AGAGCATGGCCCAGACAAGCAGCTGGGTTGGCTTCT...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATGGAAGGTCTGTCACTTaGCCATCACTGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNGRSVT*PSLDQP
Trigger: TGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCC...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTTGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSCPPAE*DGASGF
Trigger: GAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACA...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTGGCAGCAGCTCCAGCTaGTCCACGTCCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCGSSSS*STSCTV
Trigger: CACTGTGCAGGACGTGGACCAGCTGGAGCTGCTGCC...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTGGCAGCAGCTCCAGCTaGTCCACGTCCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLGSSSS*STSCTV
Trigger: CACTGTGCAGGACGTGGACCAGCTGGAGCTGCTGCC...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCACAGCGTTCCGCATaGACTCCCTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: IVVRHIIRNHVSKVQQEVPQRSA*TPCGAS
Trigger: ACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGG...AACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTAATGCACCCAGGAACTaGCTGCAATCTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCNAPRN*LQSPCR
Trigger: CCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATT...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATGTAACCTCCGTCTCCTaGGTTCAAGCGAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNVTSVS*VQANLL
Trigger: CAGGAGATTCGCTTGAACTCAGGAGACGGAGGTTAC...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTAGCAAGGCACGCCTGTaGCATGAGAGTCTCGGCACG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLSKARL*HESLGT
Trigger: CGTGCCGAGACTCTCATGTCACAGGCGTGCCTTGCT...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp ACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAAGTTCTCTCGCCAGCCTaGGTGCACGCCATAAACTGG +
Preference number: 4 (lower is better)
Translates to: TNFQYATAISKSMGPAVKVLSPA*VHAINW
Trigger: CCAGTTTATGGCGTGCACTCAGGCTGGCGAGAGAAC...TTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR GCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGTGTCCTTCAGCTCCTaGTCCAGTCTTGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QTTMYILASKCAQGHKGLVSFSS*SSLGRR
Trigger: TCTTCTGCCAAGACTGGAGCAGGAGCTGAAGGACAC...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATGTGACTACTGGCCGTaGATATTCTACAAAATCATC +
Preference number: 4 (lower is better)
Translates to: AALVGPPQPGGHEKQMITCDYWP*IFYKII
Trigger: GATGATTTTGTAGAATATGCACGGCCAGTAGTCACA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATTTCAAGCGAATCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNFKRIS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGATTCGCTTGAA...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGGTGGATCTTTGTACCTaGCGTACAGCCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QITLISNTQQPFLSRWDPVDLCT*RTAAPA
Trigger: AGCTGGAGCGGCTGTACGGCAGGTACAAAGATCCAC...CGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPAPLVS*LVKNDF
Trigger: GAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPAPLVS*LVKNDF
Trigger: GAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGC...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: QTTMYILASKCAQGHKGLMGWRL*FHGWSR
Trigger: TCTTGACCAGCCATGAAACCAGAGGCGCCATCCCAT...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTCCACAAAGCAGCCGCTaGCTGTCCTCCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCPQSSR*LSSGRM
Trigger: CATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGG...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGTACCACAAGAGGATaGAAAGAACCAGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWGTTRG*KEPAHS
Trigger: CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTCAAAGGTCTGGATGCTaGGCACTACGGGTACCACAA +
Preference number: 4 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCQRSGC*ALRVPQ
Trigger: TTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTG...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCAGAATCCATGAAGCCTaGAAGATACGCTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCRIHEA*KIRSRF
Trigger: AAAACGTGAGCGTATCTTCCAGGCTTCATGGATTCT...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
3UTR CAA 72 bp GAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTaGCTATGCAAAGCTACATGGGGATTGAGAACCATA +
Preference number: 4 (lower is better)
Translates to: EINSAGIVPRVP*LCKATWGLRTI
Trigger: TATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGTTCTCTCGCCAGCCTaGGTGCACGCCATAAACTGG +
Preference number: 4 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQVLSPA*VHAINW
Trigger: CCAGTTTATGGCGTGCACTCAGGCTGGCGAGAGAAC...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp TGGATGCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGTCATCACAAAACTGTTaGATCCCATCGACTCCAATT +
Preference number: 4 (lower is better)
Translates to: WMLGTTGTTRGWKEPAHSSSQNC*IPSTPI
Trigger: AATTGGAGTCGATGGGATTCAACAGTTTTGTGATGA...CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCGTAAAGCTTTCACATTaGGAAATGGAGGTGAACCTA +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAVKLSH*EMEVNL
Trigger: TAGGTTCACCTCCATTTCTCAATGTGAAAGCTTTAC...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCTGTGACTACTGGCCGTaGATATTCTACAAAATCATC +
Preference number: 4 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSACDYWP*IFYKII
Trigger: GATGATTTTGTAGAATATGCACGGCCAGTAGTCACA...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 4 (lower is better)
Translates to: NQRQCTQELTAISLQDTNHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...ATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTTGGAATCAGCGACAATaGACCCAGGAACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCWNQRQ*TQELTA
Trigger: TGCAGTCAGTTCCTGGGTGCATTGTCGCTGATTCCA...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLMPCCQ*HRNVIR
Trigger: CCGAATGACGTTGCGGTGGCACTGGCAACACGGCAT...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGATGCCGTGTTGCCAGTaGCACCGCAACGTCATTCGG +
Preference number: 4 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQMPCCQ*HRNVIR
Trigger: CCGAATGACGTTGCGGTGGCACTGGCAACACGGCAT...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTTTCAAGCGAATCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSFKRIS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGATTCGCTTGAA...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGAACCTAAACCTTTCTaGCCTGGGTTCTTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPEPKPF*PGFLAK
Trigger: CTTCGCTAAGAACCCAGGGCAGAAAGGTTTAGGTTC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGTCCACCTGTGACTACTaGCCGTGCATATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: INSAGIVPRVPLLCKATWSTCDY*PCIFYK
Trigger: TTTGTAGAATATGCACGGCCAGTAGTCACAGGTGGA...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTATGGGATGGCGCCTCTaGTTTCATGGCTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSMGWRL*FHGWSR
Trigger: TCTTGACCAGCCATGAAACCAGAGGCGCCATCCCAT...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTTGTCCTCCGGCAGAATaGGATGGCGCCTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLCPPAE*DGASGF
Trigger: GAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACA...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AATCAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCCACAGGCGGCGCTATaGCTCTACCTTAGTATTTTG +
Preference number: 4 (lower is better)
Translates to: NQRQCTQELTAISLQDTNPQAAL*LYLSIL
Trigger: CAAAATACTAAGGTAGAGCCATAGCGCCGCCTGTGG...ATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTTCACTTGCCCATCACTaGACCAGCCAGAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCSLAHH*TSQKPA
Trigger: CGCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGA...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGTTCCCATTAGAGTTCTaGAAGCAGAGCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQFPLEF*KQSLGK
Trigger: CTTCCCCAGGCTCTGCTTCCAGAACTCTAATGGGAA...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGTAAGAGAGGCCCAGTaGTATATAAACGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPVREAQ*YINGVR
Trigger: TCTCACACCGTTTATATATCACTGGGCCTCTCTTAC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATAGCTCACCAATCAGATaGAGGTTTTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNSSPIR*RFWGWV
Trigger: AACCCAACCCCAAAACCTTCATCTGATTGGTGAGCT...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATTACTCCTGCTTAACTTaGTGCCTAGAAAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNYSCLT*CLEKAA
Trigger: CGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGAGTA...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAATGCCACCCAGGAACTGACTaGAATCTCCTTGCAGGATAC +
Preference number: 4 (lower is better)
Translates to: NFQYATAISKSMGPAVKCHPGTD*NLLAGY
Trigger: GTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG...GCATTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp CCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCCGTGTGCCGTTGCTATaGAAAGCTACATGGGGATTG +
Preference number: 4 (lower is better)
Translates to: PDNTNFQYATAISKSMGPRVPLL*KATWGL
Trigger: CAATCCCCATGTAGCTTTGCATAGCAACGGCACACG...GGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGAATCGTGCCACGTGTaGCGTTGCTATGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSESCHV*RCYAKL
Trigger: TAGCTTTGCATAGCAACGGCACACGTGGCACGATTC...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMLWFHG*SRMTSG
Trigger: TCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAG...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAATGCGCGCCTCTGGTTTCATaGCTGGTCAAGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: NFQYATAISKSMGPAVKCAPLVS*LVKNDF
Trigger: GAAGTCATTCTTGACCAGCCATGAAACCAGAGGCGC...GCATTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGTCCGGCAGAATGGGATaGCGCCTCTGGTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMSGRMG*RLWFHG
Trigger: GCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGA...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCACTATGCAAAGCTACATaGGGATTGAGAACCATAAAA +
Preference number: 4 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPLCKAT*GLRTIK
Trigger: TTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAG...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCTATGCAAAGCTACATaGGGATTGAGAACCATAAAA +
Preference number: 4 (lower is better)
Translates to: SFDVYKNAAPCRGHMPCCLCKAT*GLRTIK
Trigger: TTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAG...GCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGGGTACCACAAGAGGATaGAAAGAACCAGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: QTTMYILASKCAQGHKGLGTTRG*KEPAHS
Trigger: CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGCGCATGGACTCCCTGTaGAGCGAGTCTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMRMDSL*SESGFW
Trigger: CCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCG...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp GTTTCATGGCTGGTCAAGAATGACTTCTGGAATCAGCGACAATGCACCCAGGAAGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: VSWLVKNDFWNQRQCTQEGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...TTCCTGGGTGCATTGTCGCTGATTCCAGAAGTCATTCTTGACCAGCCATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGGTAAGAGAGGCCCAGTaGTATATAAACGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SSPLGHILNSFDVYKNAAVREAQ*YINGVR
Trigger: TCTCACACCGTTTATATATCACTGGGCCTCTCTTAC...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGGTAAGAGAGGCCCAGTaGTATATAAACGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQVREAQ*YINGVR
Trigger: TCTCACACCGTTTATATATCACTGGGCCTCTCTTAC...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp CAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTGTCCTGCTTAACTTGCTaGCTAGAAAAGGCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: QTTMYILASKCAQGHKGLSCLTC*LEKAAF
Trigger: AAACGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGA...CAGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAATGCCCTTTAGCTTCTCCATaGTGTCACACCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NFQYATAISKSMGPAVKCPLASP*CHTQVL
Trigger: CAGAACTTGGGTGTGACAGCATGGAGAAGCTAAAGG...GCATTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CCA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGCTCTGGTTTCATGGCTaGTCAAGAATGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQLWFHG*SRMTSG
Trigger: TCCAGAAGTCATTCTTGACCAGCCATGAAACCAGAG...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGCAAAGGTCTGGATGCTaGGCACTACGGGTACCACAA +
Preference number: 4 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQQRSGC*ALRVPQ
Trigger: TTGTGGTACCCGTAGTGCCCAGCATCCAGACCTTTG...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp ACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGCCTGTGGAGCGAGTCTaGGTTTTGGAAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TFQITLISNTQQPFLSRWPVERV*VLEEAV
Trigger: GACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGG...CCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CCA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTTTTGTTTTCATCTTGTaGATCTTTGTACCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFFVFIL*IFVPAV
Trigger: TACGGCAGGTACAAAGATCCACAAGATGAAAACAAA...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGTGTCCTTCAGCTCCTaGTCCAGTCTTGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMVSFSS*SSLGRR
Trigger: TCTTCTGCCAAGACTGGAGCAGGAGCTGAAGGACAC...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
3UTR CAA 72 bp CAGCGACAATGCACCCAGGAACTGACTGCAATCTCCTaGCAGGATACAAATCATTTCATAATCTTACTCCTG +
Preference number: 4 (lower is better)
Translates to: QRQCTQELTAIS*QDTNHFIILLL
Trigger: CAGGAGTAAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTGCATTGTCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp CACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTAGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: HYGYHKRMERTSSFGFIVGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...TACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTAGCTCACCAATCAGATaGAGGTTTTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCSSPIR*RFWGWV
Trigger: AACCCAACCCCAAAACCTTCATCTGATTGGTGAGCT...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGTCATCACAAAACTGTTaGATCCCATCGACTCCAATT +
Preference number: 4 (lower is better)
Translates to: SSPLGHILNSFDVYKNAASSQNC*IPSTPI
Trigger: AATTGGAGTCGATGGGATTCAACAGTTTTGTGATGA...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTCTGCTAAATTCACACTaGGTTGCTGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCLLNSH*VAALNF
Trigger: GAAGTTCAGGGCAGCAACTCAGTGTGAATTTAGCAG...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp GCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTTGTGACTACTGGCCGTaGATATTCTACAAAATCATC +
Preference number: 4 (lower is better)
Translates to: ALRVPQEDGKNQLIRFYCCDYWP*IFYKII
Trigger: GATGATTTTGTAGAATATGCACGGCCAGTAGTCACA...ACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR GCA 90 bp ATGATTAGTCTTGTCCTGCTTATAAGTCTACATCCTTATCACTTAGGAAGAACAAGAAGCCAACCCAGCTaGTTGTCTGGGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: MISLVLLISLHPYHLGRTRSQPS*LSGPCS
Trigger: AGAGCATGGCCCAGACAAGCAGCTGGGTTGGCTTCT...TGTTCTTCCTAAGTGATAAGGATGTAGACTTATAAGCAGGACAAGACTAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTCCTTTAGCTTCTCCATaGTGTCACACCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLPLASP*CHTQVL
Trigger: CAGAACTTGGGTGTGACAGCATGGAGAAGCTAAAGG...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp ATGATTAGTCTTGTCCTGCTTATAAGTCTACATCCTTATCACTTAGGAAGAACAGGAAGAAGCTGTCCGTaGCCTCGTCTAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: MISLVLLISLHPYHLGRTGRSCP*PRLVST
Trigger: AGTGGAGACTAGACGAGGCCACGGACAGCTTCTTCC...TGTTCTTCCTAAGTGATAAGGATGTAGACTTATAAGCAGGACAAGACTAATCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CCA 90 bp ATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTTTTGTTTTCATCTTGTaGATCTTTGTACCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: ISSAIMFPKSSRRFQVSLFVFIL*IFVPAV
Trigger: TACGGCAGGTACAAAGATCCACAAGATGAAAACAAA...AAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp ACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAAGGTGTCCCTTGGAATTaGTCTTTTGTGATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TNFQYATAISKSMGPAVKGVPWN*SFVMFH
Trigger: ATGGAACATCACAAAAGATCAATTCCAAGGGACACC...TTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGCTGCTAAATTCACACTaGGTTGCTGCCCTGAACTTC +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMLLNSH*VAALNF
Trigger: GAAGTTCAGGGCAGCAACTCAGTGTGAATTTAGCAG...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp AATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGCAGTAAAATGCGTAAAGCTTTCACATTaGGAAATGGAGGTGAACCTA +
Preference number: 4 (lower is better)
Translates to: NFQYATAISKSMGPAVKCVKLSH*EMEVNL
Trigger: TAGGTTCACCTCCATTTCTCAATGTGAAAGCTTTAC...GCATTTTACTGCGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR TCA 90 bp TTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCGGACCTTGTCCTTCTaGGACGATTTAAGCTTATGT +
Preference number: 4 (lower is better)
Translates to: FQITLISNTQQPFLSRWDRTLSF*DDLSLC
Trigger: ACATAAGCTTAAATCGTCTCAGAAGGACAAGGTCCG...GTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438545.6
CDS-3UTR GCA 90 bp ATGATTAGTCTTGTCCTGCTTATAAGTCTACATCCTTATCACTTAGGAAGAACAACTCTGCTGGAATCGTaGCACGTGTGCCGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: MISLVLLISLHPYHLGRTTLLES*HVCRCY
Trigger: ATAGCAACGGCACACGTGGCACGATTCCAGCAGAGT...TGTTCTTCCTAAGTGATAAGGATGTAGACTTATAAGCAGGACAAGACTAATCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR GCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGAACCTAAACCTTTCTaGCCTGGGTTCTTAGCGAAG +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMEPKPF*PGFLAK
Trigger: CTTCGCTAAGAACCCAGGGCAGAAAGGTTTAGGTTC...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CCA 90 bp CCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCAAACAGATGATAACATaGTGCAAGGACAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: PDNTNFQYATAISKSMGPKQMIT*CKDRLQ
Trigger: CTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTT...GGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTAAACAGATGATAACATaGTGCAAGGACAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSKQMIT*CKDRLQ
Trigger: CTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTT...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR TCA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGTCATCACAAAACTGTTaGATCCCATCGACTCCAATT +
Preference number: 4 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQSSQNC*IPSTPI
Trigger: AATTGGAGTCGATGGGATTCAACAGTTTTGTGATGA...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR GCA 90 bp ATGATTAGTCTTGTCCTGCTTATAAGTCTACATCCTTATCACTTAGGAAGAACATACTCCTGCTTAACTTaGTGCCTAGAAAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: MISLVLLISLHPYHLGRTYSCLT*CLEKAA
Trigger: CGCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGAGTA...TGTTCTTCCTAAGTGATAAGGATGTAGACTTATAAGCAGGACAAGACTAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp ATGATTAGTCTTGTCCTGCTTATAAGTCTACATCCTTATCACTTAGGAAGAACAGGTACCACAAGAGGATaGAAAGAACCAGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: MISLVLLISLHPYHLGRTGTTRG*KEPAHS
Trigger: CGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC...TGTTCTTCCTAAGTGATAAGGATGTAGACTTATAAGCAGGACAAGACTAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CCA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTAAACAGATGATAACATaGTGCAAGGACAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLKQMIT*CKDRLQ
Trigger: CTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTT...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CCA 90 bp AACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGTTTGTTTTCATCTTGTaGATCTTTGTACCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: NLPDNTNFQYATAISKSMFVFIL*IFVPAV
Trigger: TACGGCAGGTACAAAGATCCACAAGATGAAAACAAA...CATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCGCTCCTGCTCCAGTCTaGGCAGAAGAGCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: PLAVLRQNGMAPLVSWLVAPAPV*AEEPLA
Trigger: AGCTAAAGGCTCTTCTGCCAAGACTGGAGCAGGAGC...GACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp AGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCAGCAGGACACATGCCGTGTaGCCAGTGCCACCGCAACGT +
Preference number: 5 (lower is better)
Translates to: RAWGRSVTCPSLDQPEASRTHAV*PVPPQR
Trigger: ACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCT...GCTGGCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS CCA 90 bp GAGTTAAATTCATCCCTGCTCTTGGATCTCCAACCTCGGCAGCAGTaGAACGCTCCTCTCCAGCATCTCCCGGTCGTCCCTCGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: ELNSSLLLDLQPRQQ*NAPLQHLPVVPRGS
Trigger: GGAGCCGCGAGGGACGACCGGGAGATGCTGGAGAGGAGCGTTCCACTGCTGCCGAGGTTGGAGATCCAAGAGCAGGGATGAATTTAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465710.1
CDS-3UTR CAA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAGCCAACCCAGCTGCTaGTCTGGGCCATGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRSQPSC*SGPCSL
Trigger: GAGAGAGCATGGCCCAGACAAGCAGCTGGGTTGGCT...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp ATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCAAGCCAACCCAGCTGCTaGTCTGGGCCATGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: IKTQRPAEDTCRVASATASQPSC*SGPCSL
Trigger: GAGAGAGCATGGCCCAGACAAGCAGCTGGGTTGGCT...TGCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS CCA 90 bp TGCCGTACAGCCGCTCCAGCTTCTTCTTGTCCACAGCGTTCCGCATaGACTCCCTGTGGAGCGAGTCTGGGTTTTGGAAGAAGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: CRTAAPASSCPQRSA*TPCGASLGFGRSCP
Trigger: CGGACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCGGCTGTACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS CCA 90 bp TCCACAGCGTTCCGCATGGACTCCCTGTGGAGCGAGTCTGGGTTTTaGAAGAAGCTGTCCGTGGCCTCGTCTAGTCTCCACTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: STAFRMDSLWSESGF*KKLSVASSSLHSFC
Trigger: GCAGAATGAGTGGAGACTAGACGAGGCCACGGACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS-3UTR CAA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACAGGGAAGGTCTGTCACTaGCCCATCACTGGACCAGCC +
Preference number: 5 (lower is better)
Translates to: AALVGPPQPGGHEKQMITGKVCH*PITGPA
Trigger: GGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCC...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 5 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPLTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCCACCACGCCCGGCCTaGATTTTAAAATCTATAATT +
Preference number: 5 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPPPRPA*ILKSII
Trigger: AATTATAGATTTTAAAATCAAGGCCGGGCGTGGTGG...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGGGTTCCAGGTGTCCCTaGGAATTGATCTTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGGSRCP*ELIFCD
Trigger: ATCACAAAAGATCAATTCCAAGGGACACCTGGAACC...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGGGAAGGTCTGTCACTaGCCCATCACTGGACCAGCC +
Preference number: 5 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFGKVCH*PITGPA
Trigger: GGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTATCATCACAAAACTGTaGAATCCCATCGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: AVSTKQPLAVLRQNGMAPIITKL*NPIDSN
Trigger: ATTGGAGTCGATGGGATTCAACAGTTTTGTGATGAT...AGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCGCTCCTGCTCCAGTCTaGGCAGAAGAGCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSAAPAPV*AEEPLA
Trigger: AGCTAAAGGCTCTTCTGCCAAGACTGGAGCAGGAGC...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp ATAAACTCTGCTGGAATCGTGCCACGTGTGCCGTTGCTATGCAAAGCTACATGGAGGACACATGCCGTGTaGCCAGTGCCACCGCAACGT +
Preference number: 5 (lower is better)
Translates to: INSAGIVPRVPLLCKATWRTHAV*PVPPQR
Trigger: ACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCT...CCATGTAGCTTTGCATAGCAACGGCACACGTGGCACGATTCCAGCAGAGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGCGCTCCAGCTTCTTCTaGTCCACAGCGTTCCGCATG +
Preference number: 5 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPRSSFF*STAFRM
Trigger: CATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCG...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGAACGCTCCAGCTTCTTCTaGTCCACAGCGTTCCGCATG +
Preference number: 5 (lower is better)
Translates to: HPQSCFQSPAGGSRCPLERSSFF*STAFRM
Trigger: CATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCG...TTCCAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp GCAGCACTCGTGGGTCCTCCTCAACCAGGCGGACACGAGAAACAGATGATAACATCATCTTGTGGATCTTaGTACCTGCCGTACAGCCGC +
Preference number: 5 (lower is better)
Translates to: AALVGPPQPGGHEKQMITSSCGS*YLPYSR
Trigger: GCGGCTGTACGGCAGGTACAAAGATCCACAAGATGA...TGTTATCATCTGTTTCTCGTGTCCGCCTGGTTGAGGAGGACCCACGAGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CCGCTGGCTGTCCTCCGGCAGAATGGGATGGCGCCTCTGGTTTCATGGCTGGTCACATTCTTAACAGCTTaGACGTGTATAAAAACGCAG +
Preference number: 5 (lower is better)
Translates to: PLAVLRQNGMAPLVSWLVTFLTA*TCIKTQ
Trigger: CTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGT...GACCAGCCATGAAACCAGAGGCGCCATCCCATTCTGCCGGAGGACAGCCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGGTGCCACGTGTGCCGTaGCTATGCAAAGCTACATGG +
Preference number: 5 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPVPRVP*LCKATW
Trigger: CCATGTAGCTTTGCATAGCAACGGCACACGTGGCAC...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGGGGAAGGTCTGTCACTaGCCCATCACTGGACCAGCC +
Preference number: 5 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMGKVCH*PITGPA
Trigger: GGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCC...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp AAGCAGAGCCTGGGGAAGGTCTGTCACTTGCCCATCACTGGACCAGCCAGAAGCCTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 5 (lower is better)
Translates to: KQSLGKVCHLPITGPARSLTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...GCTTCTGGCTGGTCCAGTGATGGGCAAGTGACAGACCTTCCCCAGGCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp TATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGTGTTGCCAGTGCCACCGCCCACCACGCCCGGCCTaGATTTTAAAATCTATAATT +
Preference number: 5 (lower is better)
Translates to: YKNAAPCRGHMPCCQCHRPPRPA*ILKSII
Trigger: AATTATAGATTTTAAAATCAAGGCCGGGCGTGGTGG...GCGGTGGCACTGGCAACACGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGAATCATCTTGTGGATCTTaGTACCTGCCGTACAGCCGC +
Preference number: 5 (lower is better)
Translates to: HPQSCFQSPAGGSRCPLESSCGS*YLPYSR
Trigger: GCGGCTGTACGGCAGGTACAAAGATCCACAAGATGA...TTCCAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp GAACTTCCTGCGGTGTCCACAAAGCAGCCGCTGGCTGTCCTCCGGCAGAATGGGAATTTTGTTTTCATCTaGTGGATCTTTGTACCTGCC +
Preference number: 5 (lower is better)
Translates to: ELPAVSTKQPLAVLRQNGNFVFI*WIFVPA
Trigger: GGCAGGTACAAAGATCCACAAGATGAAAACAAAATT...CCCATTCTGCCGGAGGACAGCCAGCGGCTGCTTTGTGGACACCGCAGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAAGCACACTAACCTCAGCCTTACTCCTGCTTAACTaGCTGCCTAGAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AKKHRQFVLQPPSTLTSALLLLN*LPRKGC
Trigger: GCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGAGTAA...GGCTGAGGTTAGTGTGCTTGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GTGATATATAAACGGTGTGAGATAAACTCTGCTGGAATCGTGCCACGTGTGCCGGTGCCACGTGTGCCGTaGCTATGCAAAGCTACATGG +
Preference number: 5 (lower is better)
Translates to: VIYKRCEINSAGIVPRVPVPRVP*LCKATW
Trigger: CCATGTAGCTTTGCATAGCAACGGCACACGTGGCAC...CGGCACACGTGGCACGATTCCAGCAGAGTTTATCTCACACCGTTTATATATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCCACGTGTGCCGTTGCTATGCAAAGCTACATGGGGATTGAGAACCATAAAATGGTGCCACGTGTGCCGTaGCTATGCAAAGCTACATGG +
Preference number: 5 (lower is better)
Translates to: ATCAVAMQSYMGIENHKMVPRVP*LCKATW
Trigger: CCATGTAGCTTTGCATAGCAACGGCACACGTGGCAC...CATTTTATGGTTCTCAATCCCCATGTAGCTTTGCATAGCAACGGCACACGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTAAGCCAACCCAGCTGCTaGTCTGGGCCATGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HYGYHKRMERTSSFGFIVSQPSC*SGPCSL
Trigger: GAGAGAGCATGGCCCAGACAAGCAGCTGGGTTGGCT...TACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATCAGCGCTCCAGCTTCTTCTaGTCCACAGCGTTCCGCATG +
Preference number: 5 (lower is better)
Translates to: HEKQMITWCKDRLQLTNQRSSFF*STAFRM
Trigger: CATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCG...CTGATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACCCGGCTCCTGCTCCAGTCTaGGCAGAAGAGCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: QITLISNTQQPFLSRWDPAPAPV*AEEPLA
Trigger: AGCTAAAGGCTCTTCTGCCAAGACTGGAGCAGGAGC...CGGGTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp CACCCAGGAACTGACTGCAATCTCCTTGCAGGATACAAATCATTTCATAATCTTAGGACACATGCCGTGTaGCCAGTGCCACCGCAACGT +
Preference number: 5 (lower is better)
Translates to: HPGTDCNLLAGYKSFHNLRTHAV*PVPPQR
Trigger: ACGTTGCGGTGGCACTGGCAACACGGCATGTGTCCT...AAGATTATGAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAGTTCCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS CCA 90 bp GGCTGGCGGGCCAATCATGTTGATCGAATAAACTACGTAAGTTTATaGATCACTTTCACTCTGTTTCGGTATACAGCACGCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GWRANHVDRINYVSL*ITFTLFRYTARISP
Trigger: GGGGGAGATGCGTGCTGTATACCGAAACAGAGTGAAAGTGATCCATAAACTTACGTAGTTTATTCGATCAACATGATTGGCCCGCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439909.2
CDS-3UTR CAA 90 bp TCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGGACCACCACGCCCGGCCTaGATTTTAAAATCTATAATT +
Preference number: 5 (lower is better)
Translates to: SSAIMFPKSSRRFQVSLGPPRPA*ILKSII
Trigger: AATTATAGATTTTAAAATCAAGGCCGGGCGTGGTGG...TCCAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS CCA 90 bp AAACTGGCGGACCTTGTCCTTCTGAGACGATTTAAGCTTATGCTTTaGGATGCAAAAGAAGTAGGAAAGCCAATGAAGCCGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: KLADLVLLRRFKLML*DAKEVGKPMKPLQV
Trigger: AACCTGGAGCGGCTTCATTGGCTTTCCTACTTCTTTTGCATCCCAAAGCATAAGCTTAAATCGTCTCAGAAGGACAAGGTCCGCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439909.2
ENST00000465710.1
ENST00000465938.5
CDS-3UTR CAA 90 bp ACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGCTCCTGCTCCAGTCTaGGCAGAAGAGCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: TFQITLISNTQQPFLSRWAPAPV*AEEPLA
Trigger: AGCTAAAGGCTCTTCTGCCAAGACTGGAGCAGGAGC...CCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp TCCTCTCCCTTAGGGCACATTCTTAACAGCTTTGACGTGTATAAAAACGCAGCGTTACTCCTGCTTAACTaGCTGCCTAGAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSPLGHILNSFDVYKNAALLLLN*LPRKGC
Trigger: GCAGCCTTTTCTAGGCAGCAAGTTAAGCAGGAGTAA...CGCTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGTGCCCTAAGGGAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CCCTCTGTGACCATCTCTGCTAAGAAACATCGACAGTTCGTCCTGCAGCCTCCAACATTCTTAACAGCTTaGACGTGTATAAAAACGCAG +
Preference number: 5 (lower is better)
Translates to: PSVTISAKKHRQFVLQPPTFLTA*TCIKTQ
Trigger: CTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGT...TGGAGGCTGCAGGACGAACTGTCGATGTTTCTTAGCAGAGATGGTCACAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GCTGGGCACTACGGGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTGATACGCTCACGTTTTaGAGGTTTGTATTAATGCCA +
Preference number: 5 (lower is better)
Translates to: AGHYGYHKRMERTSSFGFDTLTF*RFVLMP
Trigger: TGGCATTAATACAAACCTCAAAAACGTGAGCGTATC...AAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACCCGTAGTGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp CTTAACAGCTTTGACGTGTATAAAAACGCAGCGCCCTGCAGAGGACACATGCCGGATACGCTCACGTTTTaGAGGTTTGTATTAATGCCA +
Preference number: 5 (lower is better)
Translates to: LNSFDVYKNAAPCRGHMPDTLTF*RFVLMP
Trigger: TGGCATTAATACAAACCTCAAAAACGTGAGCGTATC...CGGCATGTGTCCTCTGCAGGGCGCTGCGTTTTTATACACGTCAAAGCTGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp ACCTTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGTCATCTTGTGGATCTTaGTACCTGCCGTACAGCCGC +
Preference number: 5 (lower is better)
Translates to: TFQITLISNTQQPFLSRWSSCGS*YLPYSR
Trigger: GCGGCTGTACGGCAGGTACAAAGATCCACAAGATGA...CCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS TCA 90 bp TTACAAAGACTGCACAGTCTTCCGGGGCTGGCGGGCCAATCATGTTaGTCGAATAAACTACGTAAGTTTATGGATCACTTTCACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LQRLHSLPGLAGQSC*SNKLRKFMDHFHSV
Trigger: AACAGAGTGAAAGTGATCCATAAACTTACGTAGTTTATTCGATCAACATGATTGGCCCGCCAGCCCCGGAAGACTGTGCAGTCTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439909.2
ENST00000465710.1
CDS-3UTR CAA 90 bp TATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGAGGTTCCAGGTGTCCCTTGAATTTTGTTTTCATCTaGTGGATCTTTGTACCTGCC +
Preference number: 5 (lower is better)
Translates to: YHPQSCFQSPAGGSRCPLNFVFI*WIFVPA
Trigger: GGCAGGTACAAAGATCCACAAGATGAAAACAAAATT...CAAGGGACACCTGGAACCTCCTGCTGGACTTTGGAAACATGATTGCGGATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS-3UTR CAA 90 bp ACTTCTAAAGGTAGACAGGCCCAGTTTCCCATTAGAGTTCTGGAAGCAGAGCCTAATTTTGTTTTCATCTaGTGGATCTTTGTACCTGCC +
Preference number: 5 (lower is better)
Translates to: TSKGRQAQFPIRVLEAEPNFVFI*WIFVPA
Trigger: GGCAGGTACAAAGATCCACAAGATGAAAACAAAATT...AGGCTCTGCTTCCAGAACTCTAATGGGAAACTGGGCCTGTCTACCTTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GGACACGAGAAACAGATGATAACATGGTGCAAGGACAGACTTCAGCTCACCAATACATTCTTAACAGCTTaGACGTGTATAAAAACGCAG +
Preference number: 5 (lower is better)
Translates to: GHEKQMITWCKDRLQLTNTFLTA*TCIKTQ
Trigger: CTGCGTTTTTATACACGTCAAAGCTGTTAAGAATGT...ATTGGTGAGCTGAAGTCTGTCCTTGCACCATGTTATCATCTGTTTCTCGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp TCAGACAACGATGTACATTTTAGCTTCCAAATGTGCACAGGGGCACAAAGGTCTATCATCACAAAACTGTaGAATCCCATCGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: SDNDVHFSFQMCTGAQRSIITKL*NPIDSN
Trigger: ATTGGAGTCGATGGGATTCAACAGTTTTGTGATGAT...AGACCTTTGTGCCCCTGTGCACATTTGGAAGCTAAAATGTACATCGTTGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp GGTACCACAAGAGGATGGAAAGAACCAGCTCATTCGGTTTTATTGTATGTATGTCTGACTGCAATCTCCTaGCAGGATACAAATCATTTC +
Preference number: 5 (lower is better)
Translates to: GTTRGWKEPAHSVLLYVCLTAIS*QDTNHF
Trigger: GAAATGATTTGTATCCTGCAAGGAGATTGCAGTCAG...ACATACATACAATAAAACCGAATGAGCTGGTTCTTTCCATCCTCTTGTGGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332592.7
ENST00000375403.6
ENST00000478244.6
CDS-3UTR CAA 90 bp TTCTTCATCGTAGTTAGACATATCATCCGCAATCATGTTTCCAAAGTCCAGCAGGATACGCTCACGTTTTaGAGGTTTGTATTAATGCCA +
Preference number: 5 (lower is better)
Translates to: FFIVVRHIIRNHVSKVQQDTLTF*RFVLMP
Trigger: TGGCATTAATACAAACCTCAAAAACGTGAGCGTATC...CTGCTGGACTTTGGAAACATGATTGCGGATGATATGTCTAACTACGATGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375403.6
CDS-3UTR CAA 90 bp TTCCAGATAACACTAATTTCCAATACGCAACAGCCATTTCTAAGTCGATGGGACATCATCACAAAACTGTaGAATCCCATCGACTCCAAT +
Preference number: 5 (lower is better)
Translates to: FQITLISNTQQPFLSRWDIITKL*NPIDSN
Trigger: ATTGGAGTCGATGGGATTCAACAGTTTTGTGATGAT...GTCCCATCGACTTAGAAATGGCTGTTGCGTATTGGAAATTAGTGTTATCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6
CDS GCA 72 bp CGCGTCCAGCCCTCTGCGAGGGCCTTGGCTCGCCCCTaGGGGGTCCAACGCCAGCCTGCGGCTGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RVQPSARALARP*GVQRQPAAARP
Trigger: GGGCCTGGCAGCCGCAGGCTGGCGTTGGACCCCGCAGGGGCGAGCCAAGGCCCTCGCAGAGGGCTGGACGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496873.1
CDS CCA 72 bp CCCTCGGATCCACGCGGAACGCCCCGCGCAGCTCGCTaGGCTCGGCCTCCCACATCCAGCGCGCCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: PSDPRGTPRAAR*ARPPTSSAPPA
Trigger: CGCAGGCGGCGCGCTGGATGTGGGAGGCCGAGCCCAGCGAGCTGCGCGGGGCGTTCCGCGTGGATCCGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438545.6
CDS CCA 72 bp TCATCCCTGCTCTTGGATCTCCAACCTCGGCAGCAGTaGAACGCTCCTCTCCAGCATCTCCCGGTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: SSLLLDLQPRQQ*NAPLQHLPVVP
Trigger: AGGGACGACCGGGAGATGCTGGAGAGGAGCGTTCCACTGCTGCCGAGGTTGGAGATCCAAGAGCAGGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465710.1
CDS CAA 90 bp TCTTGTGGATCTTTGTACCTGCCGTACAGCCGCTCCAGCTTCTTCTaGTCCACAGCGTTCCGCATGGACTCCCTGTGGAGCGAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SCGSLYLPYSRSSFF*STAFRMDSLWSESG
Trigger: CCCAGACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCGGCTGTACGGCAGGTACAAAGATCCACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS CCA 72 bp TTCCGCATGGACTCCCTGTGGAGCGAGTCTGGGTTTTaGAAGAAGCTGTCCGTGGCCTCGTCTAGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: FRMDSLWSESGF*KKLSVASSSLH
Trigger: GTGGAGACTAGACGAGGCCACGGACAGCTTCTTCCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS CCA 72 bp GCCGCTCCAGCTTCTTCTTGTCCACAGCGTTCCGCATaGACTCCCTGTGGAGCGAGTCTGGGTTTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: AAPASSCPQRSA*TPCGASLGFGR
Trigger: TCTTCCAAAACCCAGACTCGCTCCACAGGGAGTCCATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS CAA 72 bp TCTTTGTACCTGCCGTACAGCCGCTCCAGCTTCTTCTaGTCCACAGCGTTCCGCATGGACTCCCTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SLYLPYSRSSFF*STAFRMDSLWS
Trigger: GCTCCACAGGGAGTCCATGCGGAACGCTGTGGACAAGAAGAAGCTGGAGCGGCTGTACGGCAGGTACAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS CCA 72 bp TGTGGAGCGAGTCTGGGTTTTGGAAGAAGCTGTCCGTaGCCTCGTCTAGTCTCCACTCATTCTGCGTTAAGC +
Preference number: 6 (lower is better)
Translates to: CGASLGFGRSCP*PRLVSTHSALS
Trigger: GCTTAACGCAGAATGAGTGGAGACTAGACGAGGCCACGGACAGCTTCTTCCAAAACCCAGACTCGCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375403.6
ENST00000438545.6
ENST00000439909.2
ENST00000460318.1
ENST00000465938.5
ENST00000478244.6
CDS TCA 72 bp CTGCACAGTCTTCCGGGGCTGGCGGGCCAATCATGTTaGTCGAATAAACTACGTAAGTTTATGGATCACTTT +
Preference number: 6 (lower is better)
Translates to: LHSLPGLAGQSC*SNKLRKFMDHF
Trigger: AAAGTGATCCATAAACTTACGTAGTTTATTCGATCAACATGATTGGCCCGCCAGCCCCGGAAGACTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439909.2
ENST00000465710.1
CDS CCA 72 bp GACCTTGTCCTTCTGAGACGATTTAAGCTTATGCTTTaGGATGCAAAAGAAGTAGGAAAGCCAATGAAGCCG +
Preference number: 6 (lower is better)
Translates to: DLVLLRRFKLML*DAKEVGKPMKP
Trigger: CGGCTTCATTGGCTTTCCTACTTCTTTTGCATCCCAAAGCATAAGCTTAAATCGTCTCAGAAGGACAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439909.2
ENST00000465710.1
ENST00000465938.5
CDS CCA 72 bp GCCAATCATGTTGATCGAATAAACTACGTAAGTTTATaGATCACTTTCACTCTGTTTCGGTATACAGCACGC +
Preference number: 6 (lower is better)
Translates to: ANHVDRINYVSL*ITFTLFRYTAR
Trigger: GCGTGCTGTATACCGAAACAGAGTGAAAGTGATCCATAAACTTACGTAGTTTATTCGATCAACATGATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439909.2
ENST00000465710.1
CDS TCA 72 bp TATTCAACTCATCTTAATGATGTAAAGCTTTCACATTaGGAAATGGAGGTGAACCTAAACCTTTCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: YSTHLNDVKLSH*EMEVNLNLSAL
Trigger: CAGGGCAGAAAGGTTTAGGTTCACCTCCATTTCTCAATGTGAAAGCTTTACATCATTAAGATGAGTTGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375403.6
ENST00000438545.6