RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCTN6 (Homo sapiens)

Ensembl gene IDs: ENSG00000104671

Ensembl transcript IDs: ENST00000221114.8, ENST00000519830.1, ENST00000520829.5, ENST00000522141.5, ENST00000522540.5, ENST00000523666.5

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGATGCCCCACCACACCTaGCTTAGTTTTTCTAGTGTT +
Preference number: 2 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQMPHHT*LSFSSV
Trigger: AACACTAGAAAAACTAAGCCAGGTGTGGTGGGGCAT...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520829.5
3UTR-3UTR TCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGGTACCTGCTGCCTCATaGAGACAATTACATTGTATT +
Preference number: 2 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQVPAAS*RQLHCI
Trigger: AATACAATGTAATTGTCTTCATGAGGCAGCAGGTAC...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR GCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGAGAGGTTCTAGTACCTaGGGTCGCTCAGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQRGSST*GRSVCT
Trigger: GGTGCAGACTGAGCGACCGCAGGTACTAGAACCTCT...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR TCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGTGGAGTGCAGTGGCATaGTCATGGCTCATGGTAACC +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQWSAVA*SWLMVT
Trigger: GGTTACCATGAGCCATGATCATGCCACTGCACTCCA...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR CCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGATTCTTGCTTTAGGGTaGATCACTGTCCGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQILALG*ITVRGP
Trigger: CGGACCTCGGACAGTGATCCACCCTAAAGCAAGAAT...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR TCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGATCTTCACACTCTTTTaGGTCTTCTCCGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQIFTLF*VFSAMV
Trigger: TACCATGGCGGAGAAGACTCAAAAGAGTGTGAAGAT...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR TCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGCTTCAGTGTCAGGAGTaGTATTATCTGGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQLQCQE*YYLGKH
Trigger: ATGCTTACCCAGATAATATCACTCCTGACACTGAAG...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR GCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGTTCTACACATACAACTaGTCCAGGAGCAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQFYTYN*SRSNLH
Trigger: GTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAA...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR TCA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGCCGTATTCTCAGGGATaGCTTCAAATGTATTTAGGT +
Preference number: 4 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQPYSQG*LQMYLG
Trigger: ACCTAAATACATTTGAAGTCATCCCTGAGAATACGG...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR CAA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGTCCCATCTTCATGGCTaGGGAATAACAGCCAACTTC +
Preference number: 5 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQSHLHG*GITANF
Trigger: GAAGTTGGCTGTTATTCCCAAGCCATGAAGATGGGA...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR CAA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGAATCTTCACACTCTTTaGAGTCTTCTCCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQNLHTL*SLLRHG
Trigger: ACCATGGCGGAGAAGACTCAAAAGAGTGTGAAGATT...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS-3UTR CAA 90 bp TGGCTCATGGTAACCTCACACTCAAGAATTATCTTCCCACCTCAGCCTCCTCAGTCAAATGTATTTAGGTaGCAACAAGCCCCAATGATG +
Preference number: 5 (lower is better)
Translates to: WLMVTSHSRIIFPPQPPQSNVFR*QQAPMM
Trigger: CATCATTGGGGCTTGTTGCAACCTAAATACATTTGA...CTGAGGAGGCTGAGGTGGGAAGATAATTCTTGAGTGTGAGGTTACCATGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520829.5
CDS GCA 90 bp TCCGATAGTTACATCTCCTCTGATTTCACTTTCTACACATACAACTaGTCCAGGAGCAATCTTCACACTCTTTTGAGTCTTCTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: SDSYISSDFTFYTYN*SRSNLHTLLSLLRH
Trigger: ATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCAGAGGAGATGTAACTATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221114.8
ENST00000520829.5
ENST00000522540.5
ENST00000523666.5
CDS GCA 90 bp AGCGATAGTTACATCTCCTCTGATTTCACTTTCTACACATACAACTaGTCCAGGAGCAATCTTCACACTCTTTTGAGTCTTCTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: SDSYISSDFTFYTYN*SRSNLHTLLSLLRH
Trigger: ATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCAGAGGAGATGTAACTATCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519830.1
CDS GCA 90 bp AACGATAGTTACATCTCCTCTGATTTCACTTTCTACACATACAACTaGTCCAGGAGCAATCTTCACACTCTTTTGAGTCTTCTCCGCCAT +
Preference number: 5 (lower is better)
Translates to: NDSYISSDFTFYTYN*SRSNLHTLLSLLRH
Trigger: ATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCAGAGGAGATGTAACTATCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522141.5
CDS CCA 72 bp GAGCAATCTTCACACTCTTTTGAGTCTTCTCCGCCATaGTACGGCCCCAATTGGAACGTAGATCGACACCAC +
Preference number: 6 (lower is better)
Translates to: EQSSHSFESSPP*YGPNWNVDRHH
Trigger: GTGGTGTCGATCTACGTTCCAATTGGGGCCGTACCATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522141.5
CDS GCA 72 bp CAGATAGAACTCTTTTTAAAGAGAGGTTCTAGTACCTaGGGTCGCTCAGTCTGCACCCGACGAAGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: QIELFLKRGSST*GRSVCTRRRQS
Trigger: AGACTGCCTTCGTCGGGTGCAGACTGAGCGACCGCAGGTACTAGAACCTCTCTTTAAAAAGAGTTCTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520829.5