RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAB2IP (Homo sapiens)

Ensembl gene IDs: ENSG00000136848

Ensembl transcript IDs: ENST00000259371.6, ENST00000309989.1, ENST00000373782.7, ENST00000394340.7, ENST00000408936.7, ENST00000436835.5, ENST00000459906.1, ENST00000465078.1, ENST00000487716.1, ENST00000489314.1, ENST00000648444.1, ENST00000648693.1

Found 1402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTaGCTCCCTCTGCGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: QGAAGDLASRCFSLW*LPLRPPPGQRQGGE
Trigger: CTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp CCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTaGTGGCTCCCTCTGCGGCCGCCTCCTGGACAGCGGCAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: PQGAAGDLASRCFSL*WLPLRPPPGQRQGG
Trigger: CCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp TCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTaGTTCAGTCTCTGGTGGCTCCCTCTGCGGCCGCCTCCTGGACAG +
Preference number: 1 (lower is better)
Translates to: SARTPQGAAGDLASR*FSLWWLPLRPPPGQ
Trigger: CTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp AATAAGGCTCTCGGCCTGAGAGCTCACCCACCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTAGCCTCCGAGCCCGCCTGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: NKALGLRAHPPCKGS*HRPQRVASEPACPG
Trigger: GCCTGGACAGGCGGGCTCGGAGGCTACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR TCA 90 bp CCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTaGCCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCTCCCTCTGCG +
Preference number: 1 (lower is better)
Translates to: PACSLFCPHPTGSGW*PRLTLLQSLVAPSA
Trigger: CGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp GCACCAGGTGGCACTCCCTACAGGACCACTGTGCCCTGGGTGTGCTaGGCCCCAGGAGAAGGCAGATACAGTGCTCAGAGCCATCTGGCC +
Preference number: 1 (lower is better)
Translates to: APGGTPYRTTVPWVC*APGEGRYSAQSHLA
Trigger: GGCCAGATGGCTCTGAGCACTGTATCTGCCTTCTCCTGGGGCCCAGCACACCCAGGGCACAGTGGTCCTGTAGGGAGTGCCACCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp GATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTaGGAGGTGTGGGAAGCTGTGGGTCCTCCCCACAGGGACAAGAGC +
Preference number: 1 (lower is better)
Translates to: DLWLLGALEHQPGPV*EVWEAVGPPHRDKS
Trigger: GCTCTTGTCCCTGTGGGGAGGACCCACAGCTTCCCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp TCCTCACAGCCAGGAAGGTCCCAACAGGCTGCATGCAGTGGCAGGTaGTTCGGATGGAGACAGGCAGGGGACACTGACCTCCTGCTCTGT +
Preference number: 1 (lower is better)
Translates to: SSQPGRSQQAACSGR*FGWRQAGDTDLLLC
Trigger: ACAGAGCAGGAGGTCAGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGGCTGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp TTCTTTCAGGGTGAGCACCAGGTGGCACTCCCTACAGGACCACTGTaGCCTGGGTGTGCTGGGCCCCAGGAGAAGGCAGATACAGTGCTC +
Preference number: 1 (lower is better)
Translates to: FFQGEHQVALPTGPL*PGCAGPQEKADTVL
Trigger: GAGCACTGTATCTGCCTTCTCCTGGGGCCCAGCACACCCAGGGCACAGTGGTCCTGTAGGGAGTGCCACCTGGTGCTCACCCTGAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp CCAGGAAGGTCCCAACAGGCTGCATGCAGTGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACTGACCTCCTGCTCTGTGTCCTCCTA +
Preference number: 1 (lower is better)
Translates to: PGRSQQAACSGRCFG*RQAGDTDLLLCVLL
Trigger: TAGGAGGACACAGAGCAGGAGGTCAGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp CAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTaGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAG +
Preference number: 1 (lower is better)
Translates to: QIQCSEPSGQIRPDL*LLGALEHQPGPVWE
Trigger: CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp TGTGCTGGGCCCCAGGAGAAGGCAGATACAGTGCTCAGAGCCATCTaGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCA +
Preference number: 1 (lower is better)
Translates to: CAGPQEKADTVLRAI*PDPPRSLASGSPRA
Trigger: TGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTTCTCCTGGGGCCCAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp GGAATCCTCAGTTCCTCACAGCCAGGAAGGTCCCAACAGGCTGCATaGAGTGGCAGGTGCTTCGGATGGAGACAGGCAGGGGACACTGAC +
Preference number: 1 (lower is better)
Translates to: GILSSSQPGRSQQAA*SGRCFGWRQAGDTD
Trigger: GTCAGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGGCTGTGAGGAACTGAGGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp GGTAGGAATCCTCAGTTCCTCACAGCCAGGAAGGTCCCAACAGGCTaGATGCAGTGGCAGGTGCTTCGGATGGAGACAGGCAGGGGACAC +
Preference number: 1 (lower is better)
Translates to: GRNPQFLTARKVPTG*MQWQVLRMETGRGH
Trigger: GTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGGCTGTGAGGAACTGAGGATTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 90 bp TGGAGAGGGAGCAAGTCTAACATCCTCCAGGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAG +
Preference number: 1 (lower is better)
Translates to: WRGSKSNILQGRYFP*SAHAQLKRPLCSSK
Trigger: CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGATGTTAGACTTGCTCCCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR TCA 90 bp CGGTCCTCCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTaGCAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTA +
Preference number: 1 (lower is better)
Translates to: RSSTPTFWAVGKSPH*QEVWQFPSPRTWKL
Trigger: TAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGAGGACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR CCA 90 bp CTGTGGGTCCTCCCCACAGGGACAAGAGCTCACAAGAAAAAGCCATaGCCCTCACTGGGTCTATCTGGCAATACAACTAAGGCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: LWVLPTGTRAHKKKP*PSLGLSGNTTKAGK
Trigger: CTTCCCTGCCTTAGTTGTATTGCCAGATAGACCCAGTGAGGGCCATGGCTTTTTCTTGTGAGCTCTTGTCCCTGTGGGGAGGACCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR TCA 90 bp AGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTaGGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAAT +
Preference number: 1 (lower is better)
Translates to: SPRQHQDQRICTTIR*DSYITVKHQEHLQN
Trigger: ATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 2 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGCAGGGGCAGAGGGGTaGTTCCTGCAGCTCGCCCTG +
Preference number: 2 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRAGAEG*FLQLAL
Trigger: CAGGGCGAGCTGCAGGAATCACCCCTCTGCCCCTGC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCGGAGGCTCGGCCTCCTaGCACCCGCGCTGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SVSSYLPACQLICQVPGPGGSAS*HPRWGC
Trigger: GCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCC...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGTGGCACATTCCAGCTaGAGGGGCAGAGGGGTGATT +
Preference number: 2 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRVAHSS*RGRGVI
Trigger: AATCACCCCTCTGCCCCTGCAGCTGGAATGTGCCAC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGATGACAGGGCCTGGCTaGCAGGGAGTCCCGGGCCCC +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRMTGPG*QGVPGP
Trigger: GGGGCCCGGGACTCCCTGGCAGCCAGGCCCTGTCAT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 2 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCTGCGGCCGCCTCCTaGACAGCGGCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSAAAS*TAAGRG
Trigger: TCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCACCCGCGCTGGGGCTaGAACCGTGGGTGCCTCCCC +
Preference number: 2 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAHPRWG*NRGCLP
Trigger: GGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCAGGTGGGGCCTCTGTaGCACATTCCAGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRQVGPL*HIPAAG
Trigger: CCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGGGCAATGGGAGGATaGGACTGGAGCCAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAWAMGG*DWSQAL
Trigger: CAGGGCCTGGCTCCAGTCTCATCCTCCCATTGCCCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGGGGCAGGTGCAGGCTaGTGCTGTCTTGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAGAGAG*CCLGEG
Trigger: TCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTGGCTGCAACCGTGGGTaGCTCCCCAGGCCGAGACCC +
Preference number: 2 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAGCNRG*LPRPRP
Trigger: GGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCC...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTCTGGTGGCTCCCTCTaGGGCCGCCTCCTGGACAGC +
Preference number: 2 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGSGGSL*GRLLDS
Trigger: GCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLRLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 2 (lower is better)
Translates to: IWPDPPRSLASGSPRASAPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGCGGCCGCCTCCTaGACAGCGGCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KADTVLRAIWPDPPRSLASAAAS*TAAGRG
Trigger: TCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGA...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGCTGCTTCAGTCTCTaGTGGCTCCCTCTGCGGCCG +
Preference number: 2 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRCFSL*WLPLRP
Trigger: CGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACT +
Preference number: 2 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRGRCFG*RQAGDT
Trigger: AGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCAGGGGCAGAGGGGTaGTTCCTGCAGCTCGCCCTG +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEAGAEG*FLQLAL
Trigger: CAGGGCGAGCTGCAGGAATCACCCCTCTGCCCCTGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGCAGGTGCAGGCTGCTaGTGTCTTGGAGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAAGAGC*CLGEGA
Trigger: TGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 2 (lower is better)
Translates to: IWPDPPRSLASGSPRASARVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGTCTGTGATCCCTGGTaGCCCAGCCCTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRVCDPW*PSPSST
Trigger: GGTGGAGGAAGGGCTGGGCCACCAGGGATCACAGAC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTCCCTGGCACAGGTGTaGGGGGACACATGCACTCGG +
Preference number: 2 (lower is better)
Translates to: IWPDPPRSLASGSPRASASLAQV*GDTCTR
Trigger: CCGAGTGCATGTGTCCCCCCACACCTGTGCCAGGGA...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACAGGGAGCGGCTGGTaGCCTCGCCTCACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SVSSYLPACQLICQVPGPTGSGW*PRLTLL
Trigger: AAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGT...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCTTACCCAGGGCCTTTaGTCAGAATCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRLTQGL*SESAGA
Trigger: AGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCCCAACAGGCTGCATaGAGTGGCAGGTGCTTCGGA +
Preference number: 2 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASQQAA*SGRCFG
Trigger: TCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: LLICLESGGGADKLQNSLQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGACGCAGTATGGCTCTaGGCCACCCCTCCAGCACAT +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRDAVWL*ATPPAH
Trigger: ATGTGCTGGAGGGGTGGCCCAGAGCCATACTGCGTC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGCAGGGGCAGAGGGGTaGTTCCTGCAGCTCGCCCTG +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSAGAEG*FLQLAL
Trigger: CAGGGCGAGCTGCAGGAATCACCCCTCTGCCCCTGC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCATAAGGCTCTCGGCCTaGGAGCTCACCCACCCTGCA +
Preference number: 2 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPIRLSA*ELTHPA
Trigger: TGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTAT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGTGGCACATTCCAGCTaGAGGGGCAGAGGGGTGATT +
Preference number: 2 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQVAHSS*RGRGVI
Trigger: AATCACCCCTCTGCCCCTGCAGCTGGAATGTGCCAC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 2 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAATGACAGGGCCTGGCTaGCAGGGAGTCCCGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LLICLESGGGADKLQNSLMTGPG*QGVPGP
Trigger: GGGGCCCGGGACTCCCTGGCAGCCAGGCCCTGTCAT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGGGACACTGACCTCCTaGTCTGTGTCCTCCTATCTT +
Preference number: 2 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRGTLTS*SVSSYL
Trigger: AAGATAGGAGGACACAGAGCAGGAGGTCAGTGTCCC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAAGGCACGAAGGCGCATaGGTGGGGACAAGACAGAAG +
Preference number: 2 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRHEGA*VGTRQK
Trigger: CTTCTGTCTTGTCCCCACCCATGCGCCTTCGTGCCT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTTTCCCTGGACAGTCTaGCTCCCGCAGTCGTGCGGG +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEFPWTV*LPQSCG
Trigger: CCCGCACGACTGCGGGAGCCAGACTGTCCAGGGAAA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCCTAGAGCATCAGCCTaGGCCTGTGTGGGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGPRASA*ACVGGV
Trigger: CACACCTCCCACACAGGCCCAGGCTGATGCTCTAGG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 2 (lower is better)
Translates to: IWPDPPRSLASGSPRASAGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGAGCTCACCCACCCTaGAAGGGCAGCTGGCACCGG +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSRAHPP*KGSWHR
Trigger: CCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCCACCCCCACTTTCTaGGCAGTCGGAAAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSTPTF*AVGKSP
Trigger: AGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACT +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEGRCFG*RQAGDT
Trigger: AGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGAGGGTGAGCACCAGGTaGCACTCCCTACAGGACCAC +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGERVSTR*HSLQDH
Trigger: GTGGTCCTGTAGGGAGTGCCACCTGGTGCTCACCCT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGCAGGTGCAGGCTGCTaGTGTCTTGGAGAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVAGAGC*CLGEGA
Trigger: TGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGTGGCACATTCCAGCTaGAGGGGCAGAGGGGTGATT +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGVAHSS*RGRGVI
Trigger: AATCACCCCTCTGCCCCTGCAGCTGGAATGTGCCAC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACGCTGCTTCAGTCTCTaGTGGCTCCCTCTGCGGCCG +
Preference number: 2 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTRCFSL*WLPLRP
Trigger: CGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACAGGCTGCATGCAGTaGCAGGTGCTTCGGATGGAG +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGETGCMQ*QVLRME
Trigger: CTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTTCAGAGGGGGTGGGTaGGTAGGAATCCTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPFRGGG*VGILSS
Trigger: GGAACTGAGGATTCCTACCCACCCACCCCCTCTGAA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 2 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCTTACCCAGGGCCTTTaGTCAGAATCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGLTQGL*SESAGA
Trigger: AGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCCTATCTTCCTGCCTaGCAACTGATCTGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSYLPA*QLICQV
Trigger: CACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGRLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 2 (lower is better)
Translates to: LLICLESGGGADKLQNSLRVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATCCCCGAGCTCAGGGTaGACGCAGTATGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LLICLESGGGADKLQNSLSPSSG*TQYGSG
Trigger: CCCAGAGCCATACTGCGTCCACCCTGAGCTCGGGGA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCCACCCCCACTTTCTaGGCAGTCGGAAAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESTPTF*AVGKSP
Trigger: AGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGAAGAAGGTAGCAGGTaGTGCTCTGGGGACAGGTTC +
Preference number: 2 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEEEGSR*CSGDRF
Trigger: GAACCTGTCCCCAGAGCACCACCTGCTACCTTCTTC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGAGAGACCCAAGCTCCTaGTCATCTGTCTTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRRDPSS*SSVLKV
Trigger: CACTTTCAAGACAGATGAGCAGGAGCTTGGGTCTCT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCTTACCCAGGGCCTTTaGTCAGAATCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVLTQGL*SESAGA
Trigger: AGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGTGGCACATTCCAGCTaGAGGGGCAGAGGGGTGATT +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSVAHSS*RGRGVI
Trigger: AATCACCCCTCTGCCCCTGCAGCTGGAATGTGCCAC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGAAGGTAGCAGGTGGTaGTCTGGGGACAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVEGSRW*SGDRFR
Trigger: TCTGAACCTGTCCCCAGAGCACCACCTGCTACCTTC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACCTGTATGCAGCGCCTaGGTCCTTGGCCGGGGGCCG +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKPVCSA*VLGRGP
Trigger: CGGCCCCCGGCCAAGGACCCAGGCGCTGCATACAGG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGGCACGAAGGCGCATaGGTGGGGACAAGACAGAAG +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSRHEGA*VGTRQK
Trigger: CTTCTGTCTTGTCCCCACCCATGCGCCTTCGTGCCT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTAGAGACCCAAGCTCCTaGTCATCTGTCTTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGRDPSS*SSVLKV
Trigger: CACTTTCAAGACAGATGAGCAGGAGCTTGGGTCTCT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCACAAGAAAAAGCCATaGCCCTCACTGGGTCTATCT +
Preference number: 2 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGHKKKP*PSLGLS
Trigger: AGATAGACCCAGTGAGGGCCATGGCTTTTTCTTGTG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGCCATGGCCCTCACTaGGTCTATCTGGCAATACAA +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSSHGPH*VYLAIQ
Trigger: TTGTATTGCCAGATAGACCCAGTGAGGGCCATGGCT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGTGCCAGGTCCCACATaGCAGGGCCTGGCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRVPGPT*QGLAAR
Trigger: CCTGGCAGCCAGGCCCTGTCATGTGGGACCTGGCAC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 2 (lower is better)
Translates to: LLLICLESGGGADKLQNSYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 2 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGTGAAGGCACCCCAGTaGCCACTACTCAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKVKAPQ*PLLRQQ
Trigger: CTGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCAC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGTGCTCAGAGCCATCTaGCCAGATCCGCCCAGATCT +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKVLRAI*PDPPRS
Trigger: AGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCAC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGCGTGCAGTCTCTTCTaGCCGCACCCCACAGGGAGC +
Preference number: 2 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRACSLF*PHPTGS
Trigger: GCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAAGGTCCCAACAGGCTaGATGCAGTGGCAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKKVPTG*MQWQVL
Trigger: AAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATGTACAACCATTAGGTaGGATAGTTACATTACAGTC +
Preference number: 2 (lower is better)
Translates to: LLICLESGGGADKLQNSLCTTIR*DSYITV
Trigger: GACTGTAATGTAACTATCTCACCTAATGGTTGTACA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAAGAAGGCAGATACAGTaGTCAGAGCCATCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRRQIQ*SEPSGQ
Trigger: CTGGCCAGATGGCTCTGAGCACTGTATCTGCCTTCT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR TCA 72 bp TCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTaGCACCCGCGCTGGGGCTGCAACCGTGGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: SWTAAGRGGSAS*HPRWGCNRGCL
Trigger: GAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
3UTR GCA 72 bp ACCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTaGTTCAGTCTCTGGTGGCTCCCTCTGCGGCCGCCT +
Preference number: 3 (lower is better)
Translates to: TPQGAAGDLASR*FSLWWLPLRPP
Trigger: AGGCGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp GCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTaGCTCCCTCTGCGGCCGCCTCCTGGACAGCGGCAG +
Preference number: 3 (lower is better)
Translates to: AGDLASRCFSLW*LPLRPPPGQRQ
Trigger: CTGCCGCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp CCACACACACGGGGCAGGTGCAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAACATCCTCCAGGGCCGC +
Preference number: 3 (lower is better)
Translates to: PHTRGRCRLLLS*RGSKSNILQGR
Trigger: GCGGCCCTGGAGGATGTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCCGTGTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp CTCACAGCCAGGAAGGTCCCAACAGGCTGCATGCAGTaGCAGGTGCTTCGGATGGAGACAGGCAGGGGACAC +
Preference number: 3 (lower is better)
Translates to: LTARKVPTGCMQ*QVLRMETGRGH
Trigger: GTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGGCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp TGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTaGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: CSEPSGQIRPDL*LLGALEHQPGP
Trigger: AGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 3 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR GCA 72 bp AGTTCCTCACAGCCAGGAAGGTCCCAACAGGCTGCATaGAGTGGCAGGTGCTTCGGATGGAGACAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SSSQPGRSQQAA*SGRCFGWRQAG
Trigger: CCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTTCCTGGCTGTGAGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp TCCCAACAGGCTGCATGCAGTGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACTGACCTCCTGCTCTGT +
Preference number: 3 (lower is better)
Translates to: SQQAACSGRCFG*RQAGDTDLLLC
Trigger: ACAGAGCAGGAGGTCAGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp AGGTGGTGCTCTGGGGACAGGTTCAGAGGGGGTGGGTaGGTAGGAATCCTCAGTTCCTCACAGCCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: RWCSGDRFRGGG*VGILSSSQPGR
Trigger: CCTTCCTGGCTGTGAGGAACTGAGGATTCCTACCCACCCACCCCCTCTGAACCTGTCCCCAGAGCACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGC +
Preference number: 3 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESYPGP*LRICRG
Trigger: GCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp GGAAGGATCACCTTTTCTTTCAGGGTGAGCACCAGGTaGCACTCCCTACAGGACCACTGTGCCCTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: GRITFSFRVSTR*HSLQDHCALGV
Trigger: CACACCCAGGGCACAGTGGTCCTGTAGGGAGTGCCACCTGGTGCTCACCCTGAAAGAAAAGGTGATCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGAGCAAGCGGGCTTTaGTTTCTAATGCATACTGTG +
Preference number: 3 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRASGL*FLMHTV
Trigger: CACAGTATGCATTAGAAACAAAAGCCCGCTTGCTCG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR GCA 72 bp AGCAAGTCTAACATCCTCCAGGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: SKSNILQGRYFP*SAHAQLKRPLC
Trigger: ACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGATGTTAGACTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 3 (lower is better)
Translates to: RPALGSTRTKGYVQPLGENKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCAAATGTACAGAAATaGCACAGCCACACAGAGTCT +
Preference number: 3 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEANVQK*HSHTES
Trigger: AGACTCTGTGTGGCTGTGCAATTTCTGTACATTTGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 3 (lower is better)
Translates to: LLLICLESGGGADKLQNSNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp GGACAAGAGCTCACAAGAAAAAGCCATGGCCCTCACTaGGTCTATCTGGCAATACAACTAAGGCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: GQELTRKSHGPH*VYLAIQLRQGR
Trigger: TCTTCCCTGCCTTAGTTGTATTGCCAGATAGACCCAGTGAGGGCCATGGCTTTTTCTTGTGAGCTCTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CCA 72 bp TCCTCTGTACATTATTACATAGTTAAAAGTCGCAGCTaGAGGGAGGAGCTCCAGCCCAAACTCCAACGTTTG +
Preference number: 3 (lower is better)
Translates to: SSVHYYIVKSRS*REELQPKLQRL
Trigger: CAAACGTTGGAGTTTGGGCTGGAGCTCCTCCCTCCAGCTGCGACTTTTAACTATGTAATAATGTACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
3UTR TCA 72 bp CAGCACCAGGACCAAAGGATATGTACAACCATTAGGTaGGATAGTTACATTACAGTCAAACACCAAGAACAT +
Preference number: 3 (lower is better)
Translates to: QHQDQRICTTIR*DSYITVKHQEH
Trigger: ATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCCAAGGCCACGGGGTaGCAGCGGCAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRAKATG*QRQASR
Trigger: GCGGCTGGCCTGCCGCTGTCACCCCGTGGCCTTGGC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGGAGGCTCGGCCTCCTaGCACCCGCGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLGGSAS*HPRWGC
Trigger: GCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGAGGCTCGGCCTCCTaGCACCCGCGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVGGSAS*HPRWGC
Trigger: GCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGGAGGCTCGGCCTCCTaGCACCCGCGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWGGSAS*HPRWGC
Trigger: GCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCGGCCTGCCCATCTGTaGGGAGGACGTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRRPAHL*GGRRGP
Trigger: CGGGCCCCGACGTCCTCCCCACAGATGGGCAGGCCG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCGAGCTGCGGGCAGGTaGGGGCTGGACCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWRAAGR*GLDPGG
Trigger: TCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCCGGGCGGCCGCGACTaGTGCACTCCTGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPPGGRD*CTPAST
Trigger: CGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCCCGG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGGTTGGTGTCTGGCCTaGCCGCCGCACCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRGWCLA*PPHRGQ
Trigger: CTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCACCCGCGCTGGGGCTaGAACCGTGGGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASHPRWG*NRGCLP
Trigger: GGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGGCCCTTGCCGCCCTTaGGGTTGGGCGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRGPCRP*GWASPP
Trigger: CGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGGTGGGGGCGGAGGCTaGTCGATCCTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRGGGGG*SILLWG
Trigger: CCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGTGGGTCCAGGGCCCTTaGCGCCCTTGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGWVQGP*RPWGWA
Trigger: CGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCA...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGGCGGCCGCGACTGCTaGACTCCTGCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLGGRDC*TPASTR
Trigger: CCTCGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETQVHWG*PGRPPG
Trigger: GCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTTGGTGTCTGGCCTaGCCGCCGCACCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVGWCLA*PPHRGQ
Trigger: CTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGGCTGCAACCGTGGGTaGCTCCCCAGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAGCNRG*LPRPRP
Trigger: GGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCACCCGCGCTGGGGCTaGAACCGTGGGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPHPRWG*NRGCLP
Trigger: GGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTGCCGCCCTTGGGGTTaGGCGTCACCACCGGGTACC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRCRPWG*ASPPGT
Trigger: GGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGGCCCTTGCCGCCCTTaGGGTTGGGCGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLGPCRP*GWASPP
Trigger: CGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCGGCCTGCCCATCTGTaGGGAGGACGTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETRPAHL*GGRRGP
Trigger: CGGGCCCCGACGTCCTCCCCACAGATGGGCAGGCCG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRPCQVH*GCPGRP
Trigger: TGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRLPAAP*PALPGS
Trigger: TGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPLPAAP*PALPGS
Trigger: TGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGGTGTGGTTGGTGTCTaGCCTGCCCGCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRGVVGV*PARRTV
Trigger: CACGGTGCGGCGGGCAGGCCAGACACCAACCACACC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRGAWCG*CLACPP
Trigger: CGGCGGGCAGGCCAGACACCAACCACACCAGGCACC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACTGGGGCTGCAACCGTaGGTGCCTCCCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRLGLQP*VPPQAE
Trigger: CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCGGCCGCCGAGGCCCTaGCTGCCCCACAAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPRPPRP*LPHKVA
Trigger: AGCGACTTTGTGGGGCAGCCAGGGCCTCGGCGGCCG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR TCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCGCACTGCTGGGGCTaGGCAGGGACTCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPHCWG*AGTRGS
Trigger: GCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGCCAAGGCCACGGGGTaGCAGCGGCAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRAKATG*QRQASR
Trigger: GCGGCTGGCCTGCCGCTGTCACCCCGTGGCCTTGGC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGTGGCCCTCAGAGCCTaGGTCGCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETVALRA*VAKATG
Trigger: CCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCAC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGCCCACCCAATCAGGTaGGGCCGACGCCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAAHPIR*GRRQGS
Trigger: GGAACCCTGGCGTCGGCCTCACCTGATTGGGTGGGC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGCAGGGGCAGAGGGGTaGTTCCTGCAGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAAGAEG*FLQLAL
Trigger: CAGGGCGAGCTGCAGGAATCACCCCTCTGCCCCTGC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGAGCCCGGCCTTTCTTaGGGCGACTCCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAEPGLS*GDSLAG
Trigger: GCCTGCCAGGGAGTCGCCTCAAGAAAGGCCGGGCTC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR TCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGTGCCAGGTCCCACATaGCAGGGCCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRVPGPT*QGLAAR
Trigger: CCTGGCAGCCAGGCCCTGTCATGTGGGACCTGGCAC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCCTCCCCATCCAGCGTaGGGGCGTCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAPPHPA*GRPGGP
Trigger: TGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACTGGAAGGAGAGCGGTaGCAACAGCTGGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRLEGER*QQLGPA
Trigger: GGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCTGGAAGGAGAGCGGTaGCAACAGCTGGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPALEGER*QQLGPA
Trigger: GGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPGPALF*RGTVGC
Trigger: GCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCC...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCCTTGTCCTCCTGCTaGCGCCGCAGCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSLSSC*RRSRSS
Trigger: CGAGGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTCCTTGTCCTCCTGCTaGCGCCGCAGCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPASLSSC*RRSRSS
Trigger: CGAGGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCTGGTGGCTCCCTCTaGGGCCGCCTCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSGGSL*GRLLDS
Trigger: GCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCATGACAGGGCCTGGCTaGCAGGGAGTCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETMTGPG*QGVPGP
Trigger: GGGGCCCGGGACTCCCTGGCAGCCAGGCCCTGTCAT...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGTGCCGCCCTTGGGGTTaGGCGTCACCACCGGGTACC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLCRPWG*ASPPGT
Trigger: GGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCA...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCGGAGGTGCCTGGTGTaGTTGGTGTCTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRRRCLV*LVSGLP
Trigger: GGGCAGGCCAGACACCAACCACACCAGGCACCTCCG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGAGCACTGTTCTGCCGTaGCACCGTGGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAESTVLP*HRGLPA
Trigger: GGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCT...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGGTGGGGGCGGAGGCTaGTCGATCCTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETGGGGG*SILLWG
Trigger: CCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGGGGCTGCAACCGTaGGTGCCTCCCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETLGLQP*VPPQAE
Trigger: CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTTCTGCGGCCGCCTCCTaGACAGCGGCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPSAAAS*TAAGRG
Trigger: TCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGA...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTCTGCGGCCGCCTCCTaGACAGCGGCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPSAAAS*TAAGRG
Trigger: TCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCGCAGA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACCTCTTCCTCCATGCTaGGGTCCAGCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRPLPPC*GPAPPP
Trigger: CGGTGGAGGCGCTGGACCTCAGCATGGAGGAAGAGG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVGSGHS*GGHWRH
Trigger: ATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEGSGHS*GGHWRH
Trigger: ATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCACTTCTCCACGAACTaGCGCCCGGCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVHFSTN*RPATEA
Trigger: TGCCTCGGTGGCCGGGCGGCAGTTCGTGGAGAAGTG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCACTTCTCCACGAACTaGCGCCCGGCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASHFSTN*RPATEA
Trigger: TGCCTCGGTGGCCGGGCGGCAGTTCGTGGAGAAGTG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGCACTTCTCCACGAACTaGCGCCCGGCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEHFSTN*RPATEA
Trigger: TGCCTCGGTGGCCGGGCGGCAGTTCGTGGAGAAGTG...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTCCCGGAAGATGAGGTaGTCGTTGTCCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRSRKMR*SLSPQR
Trigger: CCGCTGCGGGGACAACGAGCACCTCATCTTCCGGGA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRLRLPW*SGRSAA
Trigger: GGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTTGGTCCCTGGGAGCTaGCCGCTACCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPLVPGS*PLPGVL
Trigger: GAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGTTGGTCCCTGGGAGCTaGCCGCTACCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLLVPGS*PLPGVL
Trigger: GAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAA...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGCCCAGCTGAGATGCTaGTGCTGCCAGAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWAQLRC*CCQSPV
Trigger: CACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCGAGTAACTCGAGCTaGGGGCAGGTGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPSNSS*GQVRAG
Trigger: TCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPGHQLS*SGLPIC
Trigger: ACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPARPRR*LVWLVS
Trigger: AGACACCAACCACACCAGGCACCTCCGAGGGCGCGC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGCCCTCCTCCAGCCGTaGCTGGTACTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAALLQP*LVLQHQ
Trigger: CTGGTGCTGGAGTACCAGGCACGGCTGGAGGAGGGC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGATGTCCTTGTCCTCCTaGTGCCGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVMSLSS*CRRSRS
Trigger: GGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGACAT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCATGTCCTTGTCCTCCTaGTGCCGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASMSLSS*CRRSRS
Trigger: GGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGACAT...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAGAGCTCACCCACCCTaGAAGGGCAGCTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASRAHPP*KGSWHR
Trigger: CCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCT...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCCCCACTCCCCAGCGTaGAGTCTCTTCTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVPHSPA*SLFCPH
Trigger: GTGCGGGCAGAAGAGACTGCACGCTGGGGAGTGGGG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGCAGTGAGTGCAGGCTaGAGAGCTCGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAAVSAG*RARGPG
Trigger: ACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPWRPGH*SLGAAR
Trigger: GCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAWRPGH*SLGAAR
Trigger: GCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASWRPGH*SLGAAR
Trigger: GCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRCQSPV*RPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGAGCGTGCGGGCGTCCTaGAGGTCCACCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLSVRAS*RSTMER
Trigger: CCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETGAWCG*CLACPP
Trigger: CGGCGGGCAGGCCAGACACCAACCACACCAGGCACC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCAGCACTGTTCTGCCGTaGCACCGTGGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETSTVLP*HRGLPA
Trigger: GGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCT...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLASGGY*GPPNQV
Trigger: CACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPASGGY*GPPNQV
Trigger: CACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGC...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGGGGACCGGGGCGTGTaGAGCTGTAGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPGDRGV*SCSLGP
Trigger: AGGACCGAGGCTACAGCTCCACACGCCCCGGTCCCC...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGGTACAGGTGGACAGTaGCCGTGCGCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETGTGGQ*PCAEAA
Trigger: TGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCCTTGGTCTTGGCACTaGGGATGGGCTCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPPWSWH*GWARGL
Trigger: CAGCCCTCGAGCCCATCCTCAGTGCCAAGACCAAGG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAPPRQC*NFPAWQ
Trigger: CTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPPPRQC*NFPAWQ
Trigger: CTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCGCCAGGGTTCCGCTTaGGGGTCTTGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPRQGSA*GSWVLQ
Trigger: CTGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCATTGGGGCTCACAGGTaGAGGGCCCTGCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRIGAHR*RALLVH
Trigger: GTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAAT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCGCAGGCCTCTCTGCTaGCCTGGTTCTGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWRRPLC*PGSGHL
Trigger: CAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTGGGTCCAGGGCCCTTaGCGCCCTTGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRWVQGP*RPWGWA
Trigger: CGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCCCGGAAGATGAGGTaGTCGTTGTCCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSRKMR*SLSPQR
Trigger: CCGCTGCGGGGACAACGAGCACCTCATCTTCCGGGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGGCGGCCGCGACTGCTaGACTCCTGCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRGGRDC*TPASTR
Trigger: CCTCGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATCCCAGAGCAGTGAGTaGAGGCTGGAGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAASQSSE*RLESSR
Trigger: CCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCTTGGTCCCTGGGAGCTaGCCGCTACCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETLVPGS*PLPGVL
Trigger: GAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAA...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCTGAGATGCTGCTGCTaGCAGAGCCCGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPLRCCC*QSPVWR
Trigger: CCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCAGCTGAGATGCTGCTaGTGCCAGAGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPQLRCC*CQSPVW
Trigger: CCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCAGCTGAGATGCTaGTGCTGCCAGAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPAQLRC*CCQSPV
Trigger: CACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGC...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPAAQLR*CCCQSP
Trigger: CGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCCGAGTAACTCGAGCTaGGGGCAGGTGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPPSNSS*GQVRAG
Trigger: TCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCGAGTAACTCGAGCTaGGGGCAGGTGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASPSNSS*GQVRAG
Trigger: TCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGGTTGGTGTCTGGCCTaGCCGCCGCACCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRGWCLA*PPHRGQ
Trigger: CTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPARPRR*LVWLVS
Trigger: AGACACCAACCACACCAGGCACCTCCGAGGGCGCGC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGEEEDC*LRRVLG
Trigger: CCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTC...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGACAGGTGAAGGGCCCTaGTTGTGCACTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWTGEGP*LCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGT...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGGGGCAGGTGCAGGCTaGTGCTGTCTTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWGAGAG*CCLGEG
Trigger: TCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCCGAGGGCTCCATGCTaGGGCTCTTCTCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAPRAPC*GSSRKG
Trigger: GCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGAACCCCGGCAGGATGTaGCGGAAGCTGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVNPGRM*RKLWLR
Trigger: CCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRWLAGP*PRSPTA
Trigger: AGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRVSRYR*TVTVRR
Trigger: TCTGCGCACGGTCACTGTCCACCTGTACCGGGAGAC...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCGAGCTGCCCGCTACCTaGGGTGCTCAGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPELPAT*GAQCCV
Trigger: CACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTC...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCAGGTCATTGGTCCCTaGGAGCTGCCCGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVQVIGP*ELPATW
Trigger: CCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPCQVH*GCPGRP
Trigger: TGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLPCQVH*GCPGRP
Trigger: TGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWSAVAP*AARLFQ
Trigger: CTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGA...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGGTGGGGGCGGAGGCTaGTCGATCCTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRGGGGG*SILLWG
Trigger: CCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLLGCPP*RKRTAA
Trigger: GGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWLGCPP*RKRTAA
Trigger: GGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPWLQF*AVPLGG
Trigger: TCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGTGGGGCCTCTGTaGCACATTCCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPQVGPL*HIPAAG
Trigger: CCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTCCCCGAGCTCAGGGTaGACGCAGTATGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPASPSSG*TQYGSG
Trigger: CCCAGAGCCATACTGCGTCCACCCTGAGCTCGGGGA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCGCTGCTTCAGTCTCTaGTGGCTCCCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETRCFSL*WLPLRP
Trigger: CGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCTAGAGCATCAGCCTaGGCCTGTGTGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPRASA*ACVGGV
Trigger: CACACCTCCCACACAGGCCCAGGCTGATGCTCTAGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCATGGGCAGGATGGTaGTGGTTTGGTAGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASPWAGW*WFGSAP
Trigger: AGGCGCGCTACCAAACCATCACCATCCTGCCCATGG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCCATGGGCAGGATGGTaGTGGTTTGGTAGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWPWAGW*WFGSAP
Trigger: AGGCGCGCTACCAAACCATCACCATCCTGCCCATGG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTGTTCTCCCGGAAGATaGGGTGCTCGTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPACSPGR*GARCPR
Trigger: GCGGGGACAACGAGCACCTCATCTTCCGGGAGAACA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGCTCGCAGCACATCTTaGGGTTGCCCTGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAARSTS*GCPGAL
Trigger: CAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGCTCGCAGCACATCTTaGGGTTGCCCTGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAARSTS*GCPGAL
Trigger: CAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPLLQPS*DAAAAR
Trigger: TCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCACCGTTGGCCATCTaGAGATCAGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPPLAI*RSGSLA
Trigger: AGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPPRQC*NFPAWQ
Trigger: CTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGATTGGGGCTCACAGGTaGAGGGCCCTGCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLIGAHR*RALLVH
Trigger: GTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAAT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAATLPVL*RMCTRA
Trigger: TGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLTLPVL*RMCTRA
Trigger: TGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACAGCGGCCGAGCACTTaGTGGGATCCACTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRQRPST*WDPLRS
Trigger: ACTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGCAGCGGCCGAGCACTTaGTGGGATCCACTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEQRPST*WDPLRS
Trigger: ACTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTG...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGCGGCCGAGCACTTaGTGGGATCCACTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPQRPST*WDPLRS
Trigger: ACTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCGACTGCTGCACTCCTaGCTCCACGAGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPRLLHS*LHEANT
Trigger: GGTGTTTGCCTCGTGGAGGCAGGAGTGCAGCAGTCG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCTGGGGTGCTCAGTaGTGTGTGGACGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAATWGAQ*CVDVPQ
Trigger: CTGAGGGACGTCCACACAGCACTGAGCACCCCAGGT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCACCTGGGGTGCTCAGTaGTGTGTGGACGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPTWGAQ*CVDVPQ
Trigger: CTGAGGGACGTCCACACAGCACTGAGCACCCCAGGT...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCTCCCCATCCAGCGTaGGGGCGTCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPPHPA*GRPGGP
Trigger: TGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLRGTVG*PPFSVS
Trigger: ACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPRGTVG*PPFSVS
Trigger: ACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETEEEDC*LRRVLG
Trigger: CCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGCCCTGCTTGTGCACTaGCCGTGGCTTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPALLVH*PWLQFW
Trigger: CCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGAAGGGCCCTGCTTGTaGACTGCCCGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPEGPCL*TARGFS
Trigger: ACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCTTC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCCAGCACCAGCTTCTaGGTCGTCTCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASSSTSF*VVSSWH
Trigger: GTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGGACCTGTCACAGGTaGCCCACCACCAGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVGTCHR*PTTRLS
Trigger: TGAAAGCCTGGTGGTGGGGCACCTGTGACAGGTCCC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGATGTGGCGGAAGCTGTaGTTGCGGTCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGMWRKL*LRSSLG
Trigger: GCCCAAGCTGGACCGCAACCACAGCTTCCGCCACAT...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLLSRDS*ERDSFS
Trigger: GCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVLSRDS*ERDSFS
Trigger: GCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGGCTGTTGTCCTTGTTaGGATGCACCGCTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPGCCPC*DAPLAG
Trigger: TCCGGCGAGCGGTGCATCCCAACAAGGACAACAGCC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCGGCTGTTGTCCTTGTTaGGATGCACCGCTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPGCCPC*DAPLAG
Trigger: TCCGGCGAGCGGTGCATCCCAACAAGGACAACAGCC...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEWLAGP*PRSPTA
Trigger: AGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCA...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWVSRYR*TVTVRR
Trigger: TCTGCGCACGGTCACTGTCCACCTGTACCGGGAGAC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTGCCGCCCTTGGGGTTaGGCGTCACCACCGGGTACC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRCRPWG*ASPPGT
Trigger: GGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCTCAATGGCCTTGGTaGCCAGTGTGTTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPQWPW*PVCSPG
Trigger: TCCGGGAGAACACACTGGCCACCAAGGCCATTGAGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCATCTTGAGGTTGCCCTaGTGCTCTGGGAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRILRLP*CSGRSA
Trigger: CGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGAT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWRSRLY*RGSRGW
Trigger: CCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCATGCTCTGCTCCAGCTaGCTGACGGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETMLCSS*LTASQS
Trigger: GCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCAT...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCAGGTCATTGGTCCCTaGGAGCTGCCCGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETQVIGP*ELPATW
Trigger: CCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPPGGPP*RGSCHR
Trigger: ACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTGGTCGATCCTCCTCTaGGGGCCAGCACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAWSILL*GPALFC
Trigger: GCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPLGCPP*RKRTAA
Trigger: GGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACGCAGTATGGCTCTaGGCCACCCCTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRDAVWL*ATPPAH
Trigger: ATGTGCTGGAGGGGTGGCCCAGAGCCATACTGCGTC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETRVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAAGCCTCGGCATCAGATaGGACCTGTCACAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSLGIR*DLSQVP
Trigger: GGGCACCTGTGACAGGTCCCATCTGATGCCGAGGCT...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTATCGCTTCCAGCCATaGCAAGTCGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAYRFQP*QVALWG
Trigger: GCCCCAGAGGGCGACTTGCCATGGCTGGAAGCGATA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAAAACATTGTCCGTCTTaGGCTTGCCCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAKHCPS*ACPWCG
Trigger: CCCGCACCACGGGCAAGCTCAAGACGGACAATGTTT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCAAACATTGTCCGTCTTaGGCTTGCCCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAKHCPS*ACPWCG
Trigger: CCCGCACCACGGGCAAGCTCAAGACGGACAATGTTT...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTTTGGTAGCGCGCCTTaGTGCGGATCATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPFGSAP*CGSWVQ
Trigger: CTGGACCCATGATCCGCATCAAGGCGCGCTACCAAA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGCAGCGGTCCACCTCTaGCATCATCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPAAVHL*HHQVCQ
Trigger: CTGACAGACCTGATGATGTCAGAGGTGGACCGCTGC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCTTATCCCGCTCAGCTaGAGACCGGCAGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRLIPLS*RPAGKA
Trigger: TGCTTTTCCTGCCGGTCTGCAGCTGAGCGGGATAAG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATTGTCCTTGTTGGGATaGACCGCTCGCCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAALSLLG*TARRRF
Trigger: GAACCTCCGGCGAGCGGTGCATCCCAACAAGGACAA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCACAGCTTCAGGATGTaGTCCACACGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAHSFRM*STRRLL
Trigger: CAACAGCCGGCGTGTGGAGCACATCCTGAAGCTGTG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCACTTCTCCACGAACTaGCGCCCGGCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRHFSTN*RPATEA
Trigger: TGCCTCGGTGGCCGGGCGGCAGTTCGTGGAGAAGTG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCACCTAGGGCGTCCTaGAGGTACTTCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSPRAS*RYFWPT
Trigger: AGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCCGGGCGGCCGCGACTaGTGCACTCCTGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRPGGRD*CTPAST
Trigger: CGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCCCGG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRGHQLS*SGLPIC
Trigger: ACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGAGGGTCTTGGGTACTaGAGGGTGCTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAEGLGY*RVLSRL
Trigger: CAACCTGCTGAGCACCCTGCAGTACCCAAGACCCTC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGAGGGTCTTGGGTACTaGAGGGTGCTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEEGLGY*RVLSRL
Trigger: CAACCTGCTGAGCACCCTGCAGTACCCAAGACCCTC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGCCCTGCTTGTGCACTaGCCGTGGCTTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETALLVH*PWLQFW
Trigger: CCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGAAGGGCCCTGCTTGTaGACTGCCCGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPEGPCL*TARGFS
Trigger: ACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCTTC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCATTCGCAGCTTGTCCTaGAGCACCGCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRIRSLS*STARSF
Trigger: AAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAAT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCTCCAGCACCAGCTTCTaGGTCGTCTCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETSSTSF*VVSSWH
Trigger: GTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGA...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCATGTCCTTGTCCTCCTaGTGCCGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLMSLSS*CRRSRS
Trigger: GGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGACAT...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGAGTCCACAGCCGCTTaGATCTCTGCGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVESTAA*ISAWSF
Trigger: GAAGGACCACGCAGAGATGCAAGCGGCTGTGGACTC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCAGGAGGACCTCCCGGTaGTCTTCCTGGCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGRRTSR*SSWRCR
Trigger: GCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCTCCT...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCGCGTGCAGTCTCTTCTaGCCGCACCCCACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLACSLF*PHPTGS
Trigger: GCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGC...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCCCCACTCCCCAGCGTaGAGTCTCTTCTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLPHSPA*SLFCPH
Trigger: GTGCGGGCAGAAGAGACTGCACGCTGGGGAGTGGGG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAGCCTCGGCATCAGATaGGACCTCTCATTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASSLGIR*DLSLSA
Trigger: CGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCT...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCTCAATGGCCTTGGTaGCCAGTGTGTTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASPQWPW*PVCSPG
Trigger: TCCGGGAGAACACACTGGCCACCAAGGCCATTGAGG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGCAGTGAGTGCAGGCTaGAGAGCTCGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRAVSAG*RARGPG
Trigger: ACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCGTGCTCAGTGCTGTGTaGACGTCCCTCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASVLSAV*TSLRIR
Trigger: TCGGATCCTGAGGGACGTCCACACAGCACTGAGCAC...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPGGPP*RGSCHR
Trigger: ACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRWYTGF*KESGAN
Trigger: GTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCCTTGTGCACTGCCCGTaGCTTCAGTTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPALVHCP*LQFWAV
Trigger: GACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAG...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCTTGTGCACTGCCCGTaGCTTCAGTTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPLVHCP*LQFWAV
Trigger: GACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACTTGTGCACTGCCCGTaGCTTCAGTTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAALVHCP*LQFWAV
Trigger: GACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCACAACTGCGCGTTCATaGTCAAGAGCCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRTTARS*SRAKRL
Trigger: CAGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTCTAGCAGGGAGGGCGTaGCTTTCTCCAGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPLAGRA*LSPAEA
Trigger: AGCCTCTGCTGGAGAAAGCCACGCCCTCCCTGCTAG...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGACAGGCTGCATGCAGTaGCAGGTGCTTCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLTGCMQ*QVLRME
Trigger: CTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCAGGTTCAGAGGGGGTaGGTGGGTAGGAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGQVQRG*VGRNPQ
Trigger: CTGAGGATTCCTACCCACCCACCCCCTCTGAACCTG...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCAGCCTCGGCATCAGATaGGACCTTTGTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPASLGIR*DLCGGS
Trigger: GCTCCCACCACAAAGGTCCCATCTGATGCCGAGGCT...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTAAACATTGTCCGTCTTaGGCTTGCCCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPKHCPS*ACPWCG
Trigger: CCCGCACCACGGGCAAGCTCAAGACGGACAATGTTT...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCTTGGTCTTGGCACTaGGGATGGGCTCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPWSWH*GWARGL
Trigger: CAGCCCTCGAGCCCATCCTCAGTGCCAAGACCAAGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATCTGGCCCACTAGCTTaGGGTACTCCTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAASGPLA*GTPQWP
Trigger: AGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTCTGGCCCACTAGCTTaGGGTACTCCTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWSGPLA*GTPQWP
Trigger: AGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGA...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTCCACCGTTGGCCATCTaGAGATCAGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPPPLAI*RSGSLA
Trigger: AGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGG...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWAFFSQ*HLSPCQ
Trigger: CTGGCACGGCGACAGATGTCACTGACTGAAAAAGGC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCGCCAGGGTTCCGCTTaGGGGTCTTGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRRQGSA*GSWVLQ
Trigger: CTGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTCTCCTCCTGGCACTTaGACAGGGTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRSPPGT*TGSHTP
Trigger: AGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAAGGATGCTGCTGTaGACGGGCTTGATGACCACC +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPRMLL*TGLMTT
Trigger: GGTGGTCATCAAGCCCGTGCACAGCAGCATCCTTGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTTATCCCGCTCAGCTaGAGACCGGCAGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGLIPLS*RPAGKA
Trigger: TGCTTTTCCTGCCGGTCTGCAGCTGAGCGGGATAAG...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCTTGTCCTTGTTGGGATaGACCGCTCGCCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETLSLLG*TARRRF
Trigger: GAACCTCCGGCGAGCGGTGCATCCCAACAAGGACAA...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTCCCGGAAGATGAGGTaGTCGTTGTCCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRSRKMR*SLSPQR
Trigger: CCGCTGCGGGGACAACGAGCACCTCATCTTCCGGGA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTCCCAGAGCAGTGAGTaGAGGCTGGAGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRSQSSE*RLESSR
Trigger: CCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCTCCCAGAGCAGTGAGTaGAGGCTGGAGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLSQSSE*RLESSR
Trigger: CCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGA...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAPWRGS*HRWPSE
Trigger: TTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAQVHWG*PGRPPG
Trigger: GCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAACTCCTCGCTGTTaGTGTGTGAGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPTPRC*CVSSGS
Trigger: GCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACGCCAGGTCCTTTTCTaGTTGGCTGAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARQVLF*LAELVL
Trigger: AAGGACGAGCTCAGCCAAGCAGAAAAGGACCTGGCG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCTTACCCAGGGCCTTTaGTCAGAATCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLLTQGL*SESAGA
Trigger: AGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACACCCGCGCTGGGGCTaGAACCGTGGGTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAHPRWG*NRGCLP
Trigger: GGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACAGGCCGGGTCCGGCTaGGGGAGCGGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAQAGSG*GSGSSV
Trigger: GACAGAGGAGCCGCTCCCGCAGCCGGACCCGGCCTG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGACTCCTCAATGGCCTTaGTGGCCAGTGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPTPQWP*WPVCSP
Trigger: GGGAGAACACACTGGCCACCAAGGCCATTGAGGAGT...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGATGCTCTGCTCCAGCTaGCTGACGGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRMLCSS*LTASQS
Trigger: GCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCAT...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGTGCTCAGTGCTGTGTaGACGTCCCTCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPVLSAV*TSLRIR
Trigger: TCGGATCCTGAGGGACGTCCACACAGCACTGAGCAC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRCQSPV*RPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAGSCHR*PSEDQA
Trigger: AGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCC...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLGSCHR*PSEDQA
Trigger: AGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRPCQVH*GCPGRP
Trigger: TGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASWYTGF*KESGAN
Trigger: GTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGTGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAECVVSS*HLNRVS
Trigger: TGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCA...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRCVVSS*HLNRVS
Trigger: TGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASCVVSS*HLNRVS
Trigger: TGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRRVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGTCCACCCCCACTTTCTaGGCAGTCGGAAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVSTPTF*AVGKSP
Trigger: AGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGA...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCCGCTGCTTCAGTCTCTaGTGGCTCCCTCTGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGRCFSL*WLPLRP
Trigger: CGGCCGCAGAGGGAGCCACCAGAGACTGAAGCAGCG...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATTCAGAGGGGGTGGGTaGGTAGGAATCCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAFRGGG*VGILSS
Trigger: GGAACTGAGGATTCCTACCCACCCACCCCCTCTGAA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGGAAGAAGGTAGCAGGTaGTGCTCTGGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGEEGSR*CSGDRF
Trigger: GAACCTGTCCCCAGAGCACCACCTGCTACCTTCTTC...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCAGCCTGGGCCTGTGTaGGAGGTGTGGGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLQPGPV*EVWEAV
Trigger: CACAGCTTCCCACACCTCCCACACAGGCCCAGGCTG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCGAGGCTGTCTCCATaGGCGTCTGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPRLSP*ASGFLL
Trigger: AAGGAGGAACCCAGACGCTCATGGAGACAGCCTCGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGCCCCTGGCCCCACCTaGTTTATGAACCGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRAPGPT*FMNRGC
Trigger: ACAGCCTCGGTTCATAAATCAGGTGGGGCCAGGGGC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR TCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACCAGGTAGTGGTTGGTaGTGTGCTCAGCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAPGSGW*CAQRTL
Trigger: AAGAGTTCGCTGAGCACATCACCAACCACTACCTGG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGAGCTGCGGGCAGGTaGGGGCTGGACCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRAAGR*GLDPGG
Trigger: TCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETAFFSQ*HLSPCQ
Trigger: CTGGCACGGCGACAGATGTCACTGACTGAAAAAGGC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCTCCTCCTGGCACTTaGACAGGGTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSPPGT*TGSHTP
Trigger: AGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGGCGGCCGCGACTGCTaGACTCCTGCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEGGRDC*TPASTR
Trigger: CCTCGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCC...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCCGGGCGGCCGCGACTaGTGCACTCCTGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRPGGRD*CTPAST
Trigger: CGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCCCGG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTCATCAGGGTACTCCTaGAGCAGGTTGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRSSGYS*SRLKSE
Trigger: CTCACTCTTCAACCTGCTGCAGGAGTACCCTGATGA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTCCAGCAGGAAGCGCTaGATGTTGGTCCACTCATGC +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPSSRKR*MLVHSC
Trigger: GCATGAGTGGACCAACATGCAGCGCTTCCTGCTGGA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQQVHWG*PGRPPG
Trigger: GCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGGTTGGTGTCTGGCCTaGCCGCCGCACCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEGWCLA*PPHRGQ
Trigger: CTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACC...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCGCCCTGCTTGTGCACTaGCCGTGGCTTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLALLVH*PWLQFW
Trigger: CCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGC...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCATCCAACGAGGCAATaGGCTTCTCCTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWHPTRQ*ASPGHQ
Trigger: TTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCATCCAACGAGGCAATaGGCTTCTCCTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASHPTRQ*ASPGHQ
Trigger: TTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGCAGGTGCAGGCTGCTaGTGTCTTGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRAGAGC*CLGEGA
Trigger: TGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCATGCCGTTACGGGCTTaGATGCTGTACCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRMPLRA*MLYLSF
Trigger: GAAAGAGAGGTACAGCATGCAAGCCCGTAACGGCAT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCGACCTCGCCTCACGCTaGTTCAGTCTCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLDLASR*FSLWWL
Trigger: GAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTC...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGGGACACTGACCTCCTaGTCTGTGTCCTCCTATCTT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEGTLTS*SVSSYL
Trigger: AAGATAGGAGGACACAGAGCAGGAGGTCAGTGTCCC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAGAAGGCAGATACAGTaGTCAGAGCCATCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASRRQIQ*SEPSGQ
Trigger: CTGGCCAGATGGCTCTGAGCACTGTATCTGCCTTCT...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWVLLLG*QVLGLD
Trigger: ATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTAC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASVLLLG*QVLGLD
Trigger: ATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTAC...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGACAGGTACTTCTTCTTaGCTGGCAGGTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVTGTSS*LAGPWP
Trigger: AGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACAGGTACTTCTTCTTaGCTGGCAGGTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAATGTSS*LAGPWP
Trigger: AGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATCCTGCAGGTACTTCTaGCCCACTAGCTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAASCRYF*PTSLRY
Trigger: GTACCTCAAGCTAGTGGGCCAGAAGTACCTGCAGGA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGTCCTGCAGGTACTTCTaGCCCACTAGCTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGSCRYF*PTSLRY
Trigger: GTACCTCAAGCTAGTGGGCCAGAAGTACCTGCAGGA...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGGAAGCGCTGCATGTTaGTCCACTCATGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAGSAAC*STHALG
Trigger: TCCTAGAGCATGAGTGGACCAACATGCAGCGCTTCC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRRSRLY*RGSRGW
Trigger: CCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGCAGGGGTCCCAGTTTaGATACTATGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEAGVPV*ILCSAP
Trigger: TGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAEDQAR*LPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGGTGTGGTTGGTGTCTaGCCTGCCCGCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWGVVGV*PARRTV
Trigger: CACGGTGCGGCGGGCAGGCCAGACACCAACCACACC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRGAWCG*CLACPP
Trigger: CGGCGGGCAGGCCAGACACCAACCACACCAGGCACC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCAGGTCCTTTTCTGCTTaGCTGAGCTCGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRRSFSA*LSSSLL
Trigger: GAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGCCTCCAGCTTCTTGGTaGAGATTCGCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEPPASW*RFAACP
Trigger: AGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGG...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGACGCAGTATGGCTCTaGGCCACCCCTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRDAVWL*ATPPAH
Trigger: ATGTGCTGGAGGGGTGGCCCAGAGCCATACTGCGTC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGCCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGGGGACCGGGGCGTGTaGAGCTGTAGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWGDRGV*SCSLGP
Trigger: AGGACCGAGGCTACAGCTCCACACGCCCCGGTCCCC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGAGCCTCAGAACCCTGTaGGGTCGGGTCTATCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGSLRTL*GRVYLF
Trigger: GAAAAGATAGACCCGACCCCACAGGGTTCTGAGGCT...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCCAACCCCCGAGGCTCTaGAGCCAGATCTGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGQPPRL*SQIWLP
Trigger: CGGAAGCCAGATCTGGCTCCAGAGCCTCGGGGGTTG...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCGCACTGCTGGGGCTaGGCAGGGACTCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPHCWG*AGTRGS
Trigger: GCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGCCTCTTCCTCCATGCTaGGGTCCAGCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWPLPPC*GPAPPP
Trigger: CGGTGGAGGCGCTGGACCTCAGCATGGAGGAAGAGG...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCAGGTAGTGGTTGGTaGTGTGCTCAGCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPPGSGW*CAQRTL
Trigger: AAGAGTTCGCTGAGCACATCACCAACCACTACCTGG...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVETVTG*NLSDRK
Trigger: TTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCGAGCTGCGGGCAGGTaGGGGCTGGACCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRAAGR*GLDPGG
Trigger: TCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCACCGTTGGCCATCTaGAGATCAGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPPLAI*RSGSLA
Trigger: AGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCATAAGGCTCTCGGCCTaGGAGCTCACCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGIRLSA*ELTHPA
Trigger: TGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTAT...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCCAAGGATGCTGCTGTaGACGGGCTTGATGACCACC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRPRMLL*TGLMTT
Trigger: GGTGGTCATCAAGCCCGTGCACAGCAGCATCCTTGG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGTCATCAGGGTACTCCTaGAGCAGGTTGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLSSGYS*SRLKSE
Trigger: CTCACTCTTCAACCTGCTGCAGGAGTACCCTGATGA...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWAAQLR*CCCQSP
Trigger: CGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSITIF*SPAEML
Trigger: CAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASSITIF*SPAEML
Trigger: CAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGAGGGTCTTGGGTACTaGAGGGTGCTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGREGLGY*RVLSRL
Trigger: CAACCTGCTGAGCACCCTGCAGTACCCAAGACCCTC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCCTTGTCCTCCTGCTaGCGCCGCAGCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASLSSC*RRSRSS
Trigger: CGAGGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCGTTACGGGCTTGCATaGTGTACCTCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVRYGLA*CTSLSA
Trigger: AGCTGAAAGAGAGGTACAGCATGCAAGCCCGTAACG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCATGCCGTTACGGGCTTaGATGCTGTACCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPAMPLRA*MLYLSF
Trigger: GAAAGAGAGGTACAGCATGCAAGCCCGTAACGGCAT...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTACAGGTACTTCTTCTTaGCTGGCAGGTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPTGTSS*LAGPWP
Trigger: AGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGT...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGCCGCCCTTGGGGTTaGGCGTCACCACCGGGTACC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGACRPWG*ASPPGT
Trigger: GGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGGCCCTTGCCGCCCTTaGGGTTGGGCGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRGPCRP*GWASPP
Trigger: CGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGCAGTGAGTGCAGGCTaGAGAGCTCGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWAVSAG*RARGPG
Trigger: ACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGTGCTCAGTGCTGTGTaGACGTCCCTCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRVLSAV*TSLRIR
Trigger: TCGGATCCTGAGGGACGTCCACACAGCACTGAGCAC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLPAAP*PALPGS
Trigger: TGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGGTGGGGGCGGAGGCTaGTCGATCCTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQGGGGG*SILLWG
Trigger: CCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRASGGY*GPPNQV
Trigger: CACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAAGGTCCTTTTCTGCTTaGCTGAGCTCGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARSFSA*LSSSLL
Trigger: GAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGAGGTCCTTTTCTGCTTaGCTGAGCTCGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVRSFSA*LSSSLL
Trigger: GAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGACTCCTCCAGCTTCTTaGTGGAGATTCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVTPPAS*WRFAAC
Trigger: ACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCCTGTATGCAGCGCCTaGGTCCTTGGCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAPVCSA*VLGRGP
Trigger: CGGCCCCCGGCCAAGGACCCAGGCGCTGCATACAGG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCTGGGGCTGCAACCGTaGGTGCCTCCCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASALGLQP*VPPQAE
Trigger: CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGAGCCATGGCCCTCACTaGGTCTATCTGGCAATACAA +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAESHGPH*VYLAIQ
Trigger: TTGTATTGCCAGATAGACCCAGTGAGGGCCATGGCT...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCCTTGGTCTTGGCACTaGGGATGGGCTCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRPWSWH*GWARGL
Trigger: CAGCCCTCGAGCCCATCCTCAGTGCCAAGACCAAGG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPETVTG*NLSDRK
Trigger: TTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPETVTG*NLSDRK
Trigger: TTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTC...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAGCCAAGGCCACGGGGTaGCAGCGGCAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTAKATG*QRQASR
Trigger: GCGGCTGGCCTGCCGCTGTCACCCCGTGGCCTTGGC...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGTGGCCCTCAGAGCCTaGGTCGCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGVALRA*VAKATG
Trigger: CCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCAC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGCCCACCCAATCAGGTaGGGCCGACGCCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRAHPIR*GRRQGS
Trigger: GGAACCCTGGCGTCGGCCTCACCTGATTGGGTGGGC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTCTCCTGGGCATCAATaGTCTTCTGTTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWSPGHQ*SSVWSP
Trigger: TGGACTCCAAACAGAAGATCATTGATGCCCAGGAGA...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCTCCTGGGCATCAATaGTCTTCTGTTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASSPGHQ*SSVWSP
Trigger: TGGACTCCAAACAGAAGATCATTGATGCCCAGGAGA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAACAGGGAGCGGCTGGTaGCCTCGCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGATGSGW*PRLTLL
Trigger: AAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGTGCCAGGTCCCACATaGCAGGGCCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQVPGPT*QGLAAR
Trigger: CCTGGCAGCCAGGCCCTGTCATGTGGGACCTGGCAC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGACGAGAAACACTCCTaGAAGCAAACTATCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPDEKHS*KQTIAS
Trigger: GGAAGCGATAGTTTGCTTTCAGGAGTGTTTCTCGTC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTGGCCAGGTCTCCAGTaGGCAGCCCCTCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEWPGLQ*AAPPAR
Trigger: CCGGGCCGGAGGGGCTGCTCACTGGAGACCTGGCCA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGGGTCCAGGGCCCTTaGCGCCCTTGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPWVQGP*RPWGWA
Trigger: CGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGCGGCCGCGACTGCTaGACTCCTGCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGGRDC*TPASTR
Trigger: CCTCGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCTGAGATGCTGCTGCTaGCAGAGCCCGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRLRCCC*QSPVWR
Trigger: CCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGCTGAGATGCTGCTGCTaGCAGAGCCCGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWLRCCC*QSPVWR
Trigger: CCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAG...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGCCCAGCTGAGATGCTaGTGCTGCCAGAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEAQLRC*CCQSPV
Trigger: CACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGC...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCCTCCCCATCCAGCGTaGGGGCGTCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAPPHPA*GRPGGP
Trigger: TGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAGHQLS*SGLPIC
Trigger: ACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAQVHWG*PGRPPG
Trigger: GCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACTGGAAGGAGAGCGGTaGCAACAGCTGGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQLEGER*QQLGPA
Trigger: GGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRGPALF*RGTVGC
Trigger: GCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCGAGGGTCTTGGGTACTaGAGGGTGCTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGEGLGY*RVLSRL
Trigger: CAACCTGCTGAGCACCCTGCAGTACCCAAGACCCTC...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGTCGTCTTCTAACAACTaGGCGTTCATGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGSSSNN*AFMVKS
Trigger: GCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGA...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTCGTCTTCTAACAACTaGGCGTTCATGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWSSSNN*AFMVKS
Trigger: GCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGA...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCGTCTTCTAACAACTaGGCGTTCATGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSSSNN*AFMVKS
Trigger: GCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCGCCAGGTCCTTTTCTaGTTGGCTGAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRRQVLF*LAELVL
Trigger: AAGGACGAGCTCAGCCAAGCAGAAAAGGACCTGGCG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCATTCGCAGCTTGTCCTaGAGCACCGCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLIRSLS*STARSF
Trigger: AAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAAT...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAATGTCCTTGTCCTCCTaGTGCCGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAMSLSS*CRRSRS
Trigger: GGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGACAT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTGGCTCCCGCAGTCGTaGGGGGCGCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGWLPQS*GAQGEV
Trigger: CACCTCCCCCTGCGCCCCGCACGACTGCGGGAGCCA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCTGGCTCCCGCAGTCGTaGGGGGCGCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPWLPQS*GAQGEV
Trigger: CACCTCCCCCTGCGCCCCGCACGACTGCGGGAGCCA...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCCGTTCTCAGTAATCTaGAATTTGGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWPFSVI*NLVGLV
Trigger: CACCAACCCCACCAAATTGCAGATTACTGAGAACGG...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCTGGTGGCTCCCTCTaGGGCCGCCTCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSGGSL*GRLLDS
Trigger: GCTGTCCAGGAGGCGGCCGCAGAGGGAGCCACCAGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGCCCTTGCCGCCCTTaGGGTTGGGCGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGPCRP*GWASPP
Trigger: CGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCTCTTTCAACTCCCGTaGGAAGACACAGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLLFQLP*EDTVGV
Trigger: AACTCCTACTGTGTCTTCCCACGGGAGTTGAAAGAG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGCCTTGCTGCCAAATTTaGCAAAGTTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEPCCQI*QSWPGS
Trigger: AGAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGG...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCCTTGCTGCCAAATTTaGCAAAGTTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGPCCQI*QSWPGS
Trigger: AGAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGG...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGATGCTCTGCTCCAGCTaGCTGACGGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRMLCSS*LTASQS
Trigger: GCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCAT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAWRPGH*SLGAAR
Trigger: GCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLGSCHR*PSEDQA
Trigger: AGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCC...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGAGCGTGCGGGCGTCCTaGAGGTCCACCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWESVRAS*RSTMER
Trigger: CCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCT...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCGGCCTGCCCATCTGTaGGGAGGACGTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGERPAHL*GGRRGP
Trigger: CGGGCCCCGACGTCCTCCCCACAGATGGGCAGGCCG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPPCQVH*GCPGRP
Trigger: TGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGGTGTGGTTGGTGTCTaGCCTGCCCGCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRGVVGV*PARRTV
Trigger: CACGGTGCGGCGGGCAGGCCAGACACCAACCACACC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRGAWCG*CLACPP
Trigger: CGGCGGGCAGGCCAGACACCAACCACACCAGGCACC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCAGCACTGTTCTGCCGTaGCACCGTGGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASASTVLP*HRGLPA
Trigger: GGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCT...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTACTCCTCCAGCTTCTTaGTGGAGATTCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPTPPAS*WRFAAC
Trigger: ACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGT...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGCAATGCGCTTCTCCTaGGCATCAATGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVAMRFS*ASMIFC
Trigger: ACAGAAGATCATTGATGCCCAGGAGAAGCGCATTGC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGTTTCCCTGGACAGTCTaGCTCCCGCAGTCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRFPWTV*LPQSCG
Trigger: CCCGCACGACTGCGGGAGCCAGACTGTCCAGGGAAA...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTAGGAACTGGTTCATaGAGGACATGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLDSGREGRLGLLTPALGLGTGS*RTCIPP
Trigger: AGGAGGAATACATGTCCTTCATGAACCAGTTCCTAG...CCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCGAGCTGCGGGCAGGTaGGGGCTGGACCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRAAGR*GLDPGG
Trigger: TCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGCCAAGGCCACGGGGTaGCAGCGGCAGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSAKATG*QRQASR
Trigger: GCGGCTGGCCTGCCGCTGTCACCCCGTGGCCTTGGC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGTGGCCCTCAGAGCCTaGGTCGCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGVALRA*VAKATG
Trigger: CCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCAC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTCTCCTCCTGGCACTTaGACAGGGTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRSPPGT*TGSHTP
Trigger: AGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGATAAGGCTCTCGGCCTaGGAGCTCACCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRIRLSA*ELTHPA
Trigger: TGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTAT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGATAAGGCTCTCGGCCTaGGAGCTCACCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWIRLSA*ELTHPA
Trigger: TGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTAT...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCCTTCATCTTCCAGATaGGAAGACTGGAAATCATGG +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLPSSSR*EDWKSW
Trigger: CCATGATTTCCAGTCTTCTCATCTGGAAGATGAAGG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR GCA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGATGTTGGTCCACTCATaGTCTAGGAACTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: SGREGRLGLLTPALGLQPMLVHS*SRNWFM
Trigger: CATGAACCAGTTCCTAGAGCATGAGTGGACCAACAT...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGATGTTGGTCCACTCATaGTCTAGGAACTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVMLVHS*SRNWFM
Trigger: CATGAACCAGTTCCTAGAGCATGAGTGGACCAACAT...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACCGAGTAACTCGAGCTaGGGGCAGGTGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAPSNSS*GQVRAG
Trigger: TCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAGHQLS*SGLPIC
Trigger: ACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCC...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAARPRR*LVWLVS
Trigger: AGACACCAACCACACCAGGCACCTCCGAGGGCGCGC...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAEEEDC*LRRVLG
Trigger: CCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGCCCTCCTCCAGCCGTaGCTGGTACTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQALLQP*LVLQHQ
Trigger: CTGGTGCTGGAGTACCAGGCACGGCTGGAGGAGGGC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTAGAGACCCAAGCTCCTaGTCATCTGTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPRDPSS*SSVLKV
Trigger: CACTTTCAAGACAGATGAGCAGGAGCTTGGGTCTCT...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAAGAGCTCACCCACCCTaGAAGGGCAGCTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRAHPP*KGSWHR
Trigger: CCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 4 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCGGCTGCAACCGTGGGTaGCTCCCCAGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPGCNRG*LPRPRP
Trigger: GGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCC...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACCGAGGGCTCCATGCTaGGGCTCTTCTCGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAPRAPC*GSSRKG
Trigger: GCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCGGTCCAGCTTGGGCTaGCTCTTGGTGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRRSSLG*LLVRLM
Trigger: CATCAAGCGCACCAAGAGCCAGCCCAAGCTGGACCG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTGGCCCTTGCCGCCCTTaGGGTTGGGCGTCACCACCG +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAGPCRP*GWASPP
Trigger: CGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCC...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGREDQAR*LPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCCTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPLPAAP*PALPGS
Trigger: TGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAG...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGTGGTCGATCCTCCTCTaGGGGCCAGCACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRWSILL*GPALFC
Trigger: GCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCA...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCTGTATGCAGCGCCTaGGTCCTTGGCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPVCSA*VLGRGP
Trigger: CGGCCCCCGGCCAAGGACCCAGGCGCTGCATACAGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGARVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGGGGACCGGGGCGTGTaGAGCTGTAGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGGDRGV*SCSLGP
Trigger: AGGACCGAGGCTACAGCTCCACACGCCCCGGTCCCC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCAGAGCACAGAGGTCTaGGTCAAGAAAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLQSTEV*VKKEGG
Trigger: TCCTCCCTCTTTCTTGACCCAGACCTCTGTGCTCTG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGCTGCTGACCTGGTTCTaGGCACTTGCAACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWLLTWF*ALATPE
Trigger: CTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAG...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGCAGCGGTCCACCTCTaGCATCATCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRAAVHL*HHQVCQ
Trigger: CTGACAGACCTGATGATGTCAGAGGTGGACCGCTGC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGTGGCCCTCAGAGCCTaGGTCGCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVVALRA*VAKATG
Trigger: CCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCAC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTGCCCACCCAATCAGGTaGGGCCGACGCCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAAHPIR*GRRQGS
Trigger: GGAACCCTGGCGTCGGCCTCACCTGATTGGGTGGGC...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCGCAGGGGCAGAGGGGTaGTTCCTGCAGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPAGAEG*FLQLAL
Trigger: CAGGGCGAGCTGCAGGAATCACCCCTCTGCCCCTGC...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGGAAATCATGGCTTCTaGCACAACACGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLTPALGLQPWVPPQAETGNHGF*HNTKEE
Trigger: CTCTTCTTTCGTGTTGTGTCAGAAGCCATGATTTCC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCACTTCTCCACGAACTaGCGCCCGGCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGHFSTN*RPATEA
Trigger: TGCCTCGGTGGCCGGGCGGCAGTTCGTGGAGAAGTG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCCCGGAAGATGAGGTaGTCGTTGTCCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSRKMR*SLSPQR
Trigger: CCGCTGCGGGGACAACGAGCACCTCATCTTCCGGGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLRLPW*SGRSAA
Trigger: GGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTGTATTCCTCCTTGCTaGCAAATTTGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GREGRLGLLTPALGLQPWCIPPC*QIWQSW
Trigger: CCAACTTTGCCAAATTTGGCAGCAAGGAGGAATACA...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTTGGTCCCTGGGAGCTaGCCGCTACCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGLVPGS*PLPGVL
Trigger: GAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCCCAGCTGAGATGCTaGTGCTGCCAGAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGAQLRC*CCQSPV
Trigger: CACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCCTCCCCATCCAGCGTaGGGGCGTCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGPPHPA*GRPGGP
Trigger: TGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSQVHWG*PGRPPG
Trigger: GCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPARPRR*LVWLVS
Trigger: AGACACCAACCACACCAGGCACCTCCGAGGGCGCGC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAGPALF*RGTVGC
Trigger: GCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCC...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEGPALF*RGTVGC
Trigger: GCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQEEEDC*LRRVLG
Trigger: CCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAAGGGCCCTGCTTGTaGACTGCCCGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAEGPCL*TARGFS
Trigger: ACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCTTC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAACAGGTGAAGGGCCCTaGTTGTGCACTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQTGEGP*LCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACAGGTGAAGGGCCCTaGTTGTGCACTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRTGEGP*LCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCAGAGCTCACCCACCCTaGAAGGGCAGCTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRAHPP*KGSWHR
Trigger: CCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCGTTACGGGCTTGCATaGTGTACCTCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRRYGLA*CTSLSA
Trigger: AGCTGAAAGAGAGGTACAGCATGCAAGCCCGTAACG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCTGCTCTTCCTGGCGCTaGCGCCCGCGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPCSSWR*RPRTCC
Trigger: GCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCA...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCGGCTCCTCTGTCGCTaGAGCCGGGGCCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASRLLCR*SRGRLS
Trigger: GCTGAGGCGGCCCCGGCTGCAGCGACAGAGGAGCCG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAATGACAGGGCCTGGCTaGCAGGGAGTCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTMTGPG*QGVPGP
Trigger: GGGGCCCGGGACTCCCTGGCAGCCAGGCCCTGTCAT...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGTCCCAACAGGCTGCATaGAGTGGCAGGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWSQQAA*SGRCFG
Trigger: TCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGA...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGTCCCAACAGGCTGCATaGAGTGGCAGGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRSQQAA*SGRCFG
Trigger: TCCGAAGCACCTGCCACTGCATGCAGCCTGTTGGGA...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCAGAAGGCAGATACAGTaGTCAGAGCCATCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGRRQIQ*SEPSGQ
Trigger: CTGGCCAGATGGCTCTGAGCACTGTATCTGCCTTCT...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGCATTCCCAAGGGTGGTaGTCACCCAGGCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWHSQGW*SPRQLF
Trigger: GAAGAGCTGCCTGGGTGAGCACCACCCTTGGGAATG...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGAGCCTCGGCATCAGATaGGACCTCTCATTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRSLGIR*DLSLSA
Trigger: CGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGATCTTGAGGTTGCCCTaGTGCTCTGGGAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRILRLP*CSGRSA
Trigger: CGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGAT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGARSRLY*RGSRGW
Trigger: CCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRCQSPV*RPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSAVAP*AARLFQ
Trigger: CTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTAGCACTGTTCTGCCGTaGCACCGTGGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSTVLP*HRGLPA
Trigger: GGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQLGCPP*RKRTAA
Trigger: GGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAPWLQF*AVPLGG
Trigger: TCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCAGCGCCTGGGTCCTTaGCCGGGGGCCGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSQRLGP*PGAGKG
Trigger: ACCCTTCCCGGCCCCCGGCCAAGGACCCAGGCGCTG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCCCCGAGCTCAGGGTaGACGCAGTATGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSPSSG*TQYGSG
Trigger: CCCAGAGCCATACTGCGTCCACCCTGAGCTCGGGGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACTAGCAGGGAGGGCGTaGCTTTCTCCAGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGALAGRA*LSPAEA
Trigger: AGCCTCTGCTGGAGAAAGCCACGCCCTCCCTGCTAG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAACGCGGTGTGGGAGCTaGGGGGCTTTGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQTRCGS*GALWLS
Trigger: ACTCAGCCACAAAGCCCCCCAGCTCCCACACCGCGT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCGAAGACTGGAAATCATaGCTTCTGACACAACACGAA +
Preference number: 4 (lower is better)
Translates to: GEARPPDTRAGAATVGASEDWKS*LLTQHE
Trigger: TTCGTGTTGTGTCAGAAGCCATGATTTCCAGTCTTC...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGTGCTCAGAGCCATCTaGCCAGATCCGCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWVLRAI*PDPPRS
Trigger: AGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCAC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCTCTTCCTCCATGCTaGGGTCCAGCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPLPPC*GPAPPP
Trigger: CGGTGGAGGCGCTGGACCTCAGCATGGAGGAAGAGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGGTACAGGTGGACAGTaGCCGTGCGCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEGTGGQ*PCAEAA
Trigger: TGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGTTTGGTAGCGCGCCTTaGTGCGGATCATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEFGSAP*CGSWVQ
Trigger: CTGGACCCATGATCCGCATCAAGGCGCGCTACCAAA...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGTTCTCCCGGAAGATaGGGTGCTCGTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASACSPGR*GARCPR
Trigger: GCGGGGACAACGAGCACCTCATCTTCCGGGAGAACA...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGCTCGCAGCACATCTTaGGGTTGCCCTGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRARSTS*GCPGAL
Trigger: CAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCGCTCGCAGCACATCTTaGGGTTGCCCTGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAARSTS*GCPGAL
Trigger: CAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGC...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACGAGCTGCGGGCAGGTaGGGGCTGGACCCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTRAAGR*GLDPGG
Trigger: TCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGCTCG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGTGGCCCTCAGAGCCTaGGTCGCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASVALRA*VAKATG
Trigger: CCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCAC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGPPRQC*NFPAWQ
Trigger: CTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRAFFSQ*HLSPCQ
Trigger: CTGGCACGGCGACAGATGTCACTGACTGAAAAAGGC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCGCCAGGGTTCCGCTTaGGGGTCTTGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRQGSA*GSWVLQ
Trigger: CTGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGATTGGGGCTCACAGGTaGAGGGCCCTGCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRIGAHR*RALLVH
Trigger: GTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAAT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTGGGCAATGGGAGGATaGGACTGGAGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGWAMGG*DWSQAL
Trigger: CAGGGCCTGGCTCCAGTCTCATCCTCCCATTGCCCA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATTGTCCTTGTTGGGATaGACCGCTCGCCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGALSLLG*TARRRF
Trigger: GAACCTCCGGCGAGCGGTGCATCCCAACAAGGACAA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTGGGTCCAGGGCCCTTaGCGCCCTTGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASWVQGP*RPWGWA
Trigger: CGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCA...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCAGCGGCCGAGCACTTaGTGGGATCCACTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRQRPST*WDPLRS
Trigger: ACTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCGACTGCTGCACTCCTaGCTCCACGAGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRRLLHS*LHEANT
Trigger: GGTGTTTGCCTCGTGGAGGCAGGAGTGCAGCAGTCG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGGCGGCCGCGACTGCTaGACTCCTGCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSGGRDC*TPASTR
Trigger: CCTCGTGGAGGCAGGAGTGCAGCAGTCGCGGCCGCC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTGTATTCCTCCTTGCTaGCAAATTTGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PDTRAGAATVGASPGRDPCIPPC*QIWQSW
Trigger: CCAACTTTGCCAAATTTGGCAGCAAGGAGGAATACA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGACATGTATTCCTCCTTaGTGCCAAATTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LDSGREGRLGLLTPALGLTCIPP*CQIWQS
Trigger: ACTTTGCCAAATTTGGCAGCAAGGAGGAATACATGT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGTCCAGCAGGAAGCGCTaGATGTTGGTCCACTCATGC +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWSSRKR*MLVHSC
Trigger: GCATGAGTGGACCAACATGCAGCGCTTCCTGCTGGA...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCAGCTGAGATGCTGCTaGTGCCAGAGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGQLRCC*CQSPVW
Trigger: CCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCGCCAGGTCCTTTTCTaGTTGGCTGAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRRQVLF*LAELVL
Trigger: AAGGACGAGCTCAGCCAAGCAGAAAAGGACCTGGCG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 4 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGGGCAGGTGCAGGCTaGTGCTGTCTTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGAGAG*CCLGEG
Trigger: TCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATGGCTCCCGCAGTCGTaGGGGGCGCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTWLPQS*GAQGEV
Trigger: CACCTCCCCCTGCGCCCCGCACGACTGCGGGAGCCA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTGGCTCCCGCAGTCGTaGGGGGCGCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELWLPQS*GAQGEV
Trigger: CACCTCCCCCTGCGCCCCGCACGACTGCGGGAGCCA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCTCCTATCTTCCTGCCTaGCAACTGATCTGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PHRERLVTSPHAASVSGGSYLPA*QLICQV
Trigger: CACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGA...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTGGTTCTGGGCACTTaGAACCCCCGAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLVLGT*NPRGSG
Trigger: TCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQLSRDS*ERDSFS
Trigger: GCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGACTCCTCAATGGCCTTaGTGGCCAGTGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRTPQWP*WPVCSP
Trigger: GGGAGAACACACTGGCCACCAAGGCCATTGAGGAGT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCAGTGAGTGCAGGCTaGAGAGCTCGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEAVSAG*RARGPG
Trigger: ACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPCQSPV*RPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPGGPP*RGSCHR
Trigger: ACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGAGCGTGCGGGCGTCCTaGAGGTCCACCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESVRAS*RSTMER
Trigger: CCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGGCCTGCCCATCTGTaGGGAGGACGTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKRPAHL*GGRRGP
Trigger: CGGGCCCCGACGTCCTCCCCACAGATGGGCAGGCCG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCGGAGGTGCCTGGTGTaGTTGGTGTCTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGERRCLV*LVSGLP
Trigger: GGGCAGGCCAGACACCAACCACACCAGGCACCTCCG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATGGTCGATCCTCCTCTaGGGGCCAGCACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQWSILL*GPALFC
Trigger: GCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRPWLQF*AVPLGG
Trigger: TCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCTGTATGCAGCGCCTaGGTCCTTGGCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPVCSA*VLGRGP
Trigger: CGGCCCCCGGCCAAGGACCCAGGCGCTGCATACAGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCCTGTATGCAGCGCCTaGGTCCTTGGCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASPVCSA*VLGRGP
Trigger: CGGCCCCCGGCCAAGGACCCAGGCGCTGCATACAGG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTCCCCGAGCTCAGGGTaGACGCAGTATGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPSPSSG*TQYGSG
Trigger: CCCAGAGCCATACTGCGTCCACCCTGAGCTCGGGGA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGTCTGTGATCCCTGGTaGCCCAGCCCTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGVCDPW*PSPSST
Trigger: GGTGGAGGAAGGGCTGGGCCACCAGGGATCACAGAC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGTGAAGGCACCCCAGTaGCCACTACTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAVKAPQ*PLLRQQ
Trigger: CTGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCAC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCTAGCAGGGAGGGCGTaGCTTTCTCCAGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASALAGRA*LSPAEA
Trigger: AGCCTCTGCTGGAGAAAGCCACGCCCTCCCTGCTAG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
3UTR CAA 72 bp CAAAGGCCCCACTCCCACCCTTCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGCTGGGAACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QRPHSHPSYPGP*LRICRGWEQTG
Trigger: CCCTGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGAAGGGTGGGAGTGGGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCTCTTCCTCCATGCTaGGGTCCAGCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPLPPC*GPAPPP
Trigger: CGGTGGAGGCGCTGGACCTCAGCATGGAGGAAGAGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCTTGGTCTTGGCACTaGGGATGGGCTCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPWSWH*GWARGL
Trigger: CAGCCCTCGAGCCCATCCTCAGTGCCAAGACCAAGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCTGGCCCACTAGCTTaGGGTACTCCTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASGPLA*GTPQWP
Trigger: AGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCTAGGAACTGGTTCATaGAGGACATGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLLGTGS*RTCIPP
Trigger: AGGAGGAATACATGTCCTTCATGAACCAGTTCCTAG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPLLQPS*DAAAAR
Trigger: TCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCCCACCGTTGGCCATCTaGAGATCAGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASAPPLAI*RSGSLA
Trigger: AGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGG...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTGTACAACCATTAGGTaGGATAGTTACATTACAGTC +
Preference number: 4 (lower is better)
Translates to: DTRAGAATVGASPGRDPACTTIR*DSYITV
Trigger: GACTGTAATGTAACTATCTCACCTAATGGTTGTACA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGTGTACAACCATTAGGTaGGATAGTTACATTACAGTC +
Preference number: 4 (lower is better)
Translates to: RQGGEARPPDTRAGAATVCTTIR*DSYITV
Trigger: GACTGTAATGTAACTATCTCACCTAATGGTTGTACA...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAACAGGGAGCGGCTGGTaGCCTCGCCTCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTTGSGW*PRLTLL
Trigger: AAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGT...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTCTTCTCGGAAAGGCTaGCAGGCAGGCTGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSSRKG*QAGCAE
Trigger: CTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGGCGGAAGCTGTGGTTaGGGTCCAGCTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVGGSCG*GPAWAG
Trigger: GCCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATGGGTCCAGGGCCCTTaGCGCCCTTGGGGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTWVQGP*RPWGWA
Trigger: CGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPTLPVL*RMCTRA
Trigger: TGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCCCGGAAGATGAGGTaGTCGTTGTCCCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESRKMR*SLSPQR
Trigger: CCGCTGCGGGGACAACGAGCACCTCATCTTCCGGGA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCACCTAGGGCGTCCTaGAGGTACTTCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSPRAS*RYFWPT
Trigger: AGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCGACTGCTGCACTCCTaGCTCCACGAGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGRLLHS*LHEANT
Trigger: GGTGTTTGCCTCGTGGAGGCAGGAGTGCAGCAGTCG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCCAGCAGGAAGCGCTaGATGTTGGTCCACTCATGC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASSRKR*MLVHSC
Trigger: GCATGAGTGGACCAACATGCAGCGCTTCCTGCTGGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCCGAGTAACTCGAGCTaGGGGCAGGTGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGPSNSS*GQVRAG
Trigger: TCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCTGGAAGGAGAGCGGTaGCAACAGCTGGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASLEGER*QQLGPA
Trigger: GGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCCAACTCCTCGCTGTTaGTGTGTGAGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRPTPRC*CVSSGS
Trigger: GCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGRGTVG*PPFSVS
Trigger: ACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACAGGTGAAGGGCCCTaGTTGTGCACTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGETGEGP*LCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGAGTCCACAGCCGCTTaGATCTCTGCGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQESTAA*ISAWSF
Trigger: GAAGGACCACGCAGAGATGCAAGCGGCTGTGGACTC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCACTTACCCAGGGCCTTTaGTCAGAATCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGALTQGL*SESAGA
Trigger: AGCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAG...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCAGAGGGGTGATTCCTaGAGCTCGCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVQRGDS*SSPCPG
Trigger: GCCAGGGCAGGGCGAGCTGCAGGAATCACCCCTCTG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGGCTGCAACCGTGGGTaGCTCCCCAGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKGCNRG*LPRPRP
Trigger: GGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGGCTGTTGTCCTTGTTaGGATGCACCGCTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGGCCPC*DAPLAG
Trigger: TCCGGCGAGCGGTGCATCCCAACAAGGACAACAGCC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRVLLLG*QVLGLD
Trigger: ATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTAC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCCTCAATGGCCTTGGTaGCCAGTGTGTTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRPQWPW*PVCSPG
Trigger: TCCGGGAGAACACACTGGCCACCAAGGCCATTGAGG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGACTCCTCAATGGCCTTaGTGGCCAGTGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWETPQWP*WPVCSP
Trigger: GGGAGAACACACTGGCCACCAAGGCCATTGAGGAGT...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGCAGTGAGTGCAGGCTaGAGAGCTCGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVAVSAG*RARGPG
Trigger: ACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTATGCTCTGCTCCAGCTaGCTGACGGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGMLCSS*LTASQS
Trigger: GCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCAT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGATGCTCTGCTCCAGCTaGCTGACGGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEMLCSS*LTASQS
Trigger: GCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCAT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVWRPGH*SLGAAR
Trigger: GCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGPGGPP*RGSCHR
Trigger: ACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPPGGPP*RGSCHR
Trigger: ACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTLPAAP*PALPGS
Trigger: TGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCGGAGGTGCCTGGTGTaGTTGGTGTCTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRRCLV*LVSGLP
Trigger: GGGCAGGCCAGACACCAACCACACCAGGCACCTCCG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESAVAP*AARLFQ
Trigger: CTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCTCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPSAVAP*AARLFQ
Trigger: CTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGA...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGELGCPP*RKRTAA
Trigger: GGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTTGTGCACTGCCCGTaGCTTCAGTTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLVHCP*LQFWAV
Trigger: GACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACGCGGTGTGGGAGCTaGGGGGCTTTGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGETRCGS*GALWLS
Trigger: ACTCAGCCACAAAGCCCCCCAGCTCCCACACCGCGT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACTTGAGGCGACTCCCTaGCAGGCCGGGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLLEATP*QAGSGC
Trigger: GCAGCCGGACCCGGCCTGCCAGGGAGTCGCCTCAAG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGRCFG*RQAGDT
Trigger: AGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGGCAGGTGCTTCGGATaGAGACAGGCAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGGRCFG*RQAGDT
Trigger: AGTGTCCCCTGCCTGTCTCCATCCGAAGCACCTGCC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAACAGGCTGCATGCAGTaGCAGGTGCTTCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQTGCMQ*QVLRME
Trigger: CTCCATCCGAAGCACCTGCCACTGCATGCAGCCTGT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGAAGAAGGTAGCAGGTaGTGCTCTGGGGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PDLWLLGALEHQPGPVWEEEGSR*CSGDRF
Trigger: GAACCTGTCCCCAGAGCACCACCTGCTACCTTCTTC...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCTCTTCCTCCATGCTaGGGTCCAGCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPLPPC*GPAPPP
Trigger: CGGTGGAGGCGCTGGACCTCAGCATGGAGGAAGAGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCAAACATTGTCCGTCTTaGGCTTGCCCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGKHCPS*ACPWCG
Trigger: CCCGCACCACGGGCAAGCTCAAGACGGACAATGTTT...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTTTGGTAGCGCGCCTTaGTGCGGATCATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGFGSAP*CGSWVQ
Trigger: CTGGACCCATGATCCGCATCAAGGCGCGCTACCAAA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCTTGGTCTTGGCACTaGGGATGGGCTCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPWSWH*GWARGL
Trigger: CAGCCCTCGAGCCCATCCTCAGTGCCAAGACCAAGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCAGCGGTCCACCTCTaGCATCATCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGAAVHL*HHQVCQ
Trigger: CTGACAGACCTGATGATGTCAGAGGTGGACCGCTGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLALLQPS*DAAAAR
Trigger: TCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRETVTG*NLSDRK
Trigger: TTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCCACCGTTGGCCATCTaGAGATCAGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPPPLAI*RSGSLA
Trigger: AGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCACCCAATCAGGTaGGGCCGACGCCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTAHPIR*GRRQGS
Trigger: GGAACCCTGGCGTCGGCCTCACCTGATTGGGTGGGC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTGGGCAATGGGAGGATaGGACTGGAGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVWAMGG*DWSQAL
Trigger: CAGGGCCTGGCTCCAGTCTCATCCTCCCATTGCCCA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGATAAGGCTCTCGGCCTaGGAGCTCACCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEIRLSA*ELTHPA
Trigger: TGCAGGGTGGGTGAGCTCTCAGGCCGAGAGCCTTAT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACATCTTCTCGGAAAGGCTaGCAGGCAGGCTGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTSSRKG*QAGCAE
Trigger: CTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGA...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCGGCCGAGGGCTCCATaGTGGGGCTCTTCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRPRAP*WGSSRK
Trigger: TTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGGCCG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCCAAGGATGCTGCTGTaGACGGGCTTGATGACCACC +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPPRMLL*TGLMTT
Trigger: GGTGGTCATCAAGCCCGTGCACAGCAGCATCCTTGG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACTTATCCCGCTCAGCTaGAGACCGGCAGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQLIPLS*RPAGKA
Trigger: TGCTTTTCCTGCCGGTCTGCAGCTGAGCGGGATAAG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGCCCAGCTGAGATGCTaGTGCTGCCAGAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASAQLRC*CCQSPV
Trigger: CACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSAAQLR*CCCQSP
Trigger: CGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPWRGS*HRWPSE
Trigger: TTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASGHQLS*SGLPIC
Trigger: ACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELGPALF*RGTVGC
Trigger: GCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVEEEDC*LRRVLG
Trigger: CCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCCCTGCTTGTGCACTaGCCGTGGCTTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEALLVH*PWLQFW
Trigger: CCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTCCTTGTCCTCCTGCTaGCGCCGCAGCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKSLSSC*RRSRSS
Trigger: CGAGGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCATGTCCTTGTCCTCCTaGTGCCGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSMSLSS*CRRSRS
Trigger: GGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGACAT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTGGGGGCAGGGCCTCTaGTTCCACCTCCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVWGQGL*FHLPSS
Trigger: GGAAGATGGGAGGTGGAAGCAGAGGCCCTGCCCCCA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCAGAGCTCACCCACCCTaGAAGGGCAGCTGGCACCGG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASRAHPP*KGSWHR
Trigger: CCGGTGCCAGCTGCCCTTGCAGGGTGGGTGAGCTCT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGGTTGCGGTCCAGCTTaGGCTGGCTCTTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVGCGPA*AGSWCA
Trigger: AGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTATGTGGCGGAAGCTGTaGTTGCGGTCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGMWRKL*LRSSLG
Trigger: GCCCAAGCTGGACCGCAACCACAGCTTCCGCCACAT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEWLAGP*PRSPTA
Trigger: AGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPWLAGP*PRSPTA
Trigger: AGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCA...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEVSRYR*TVTVRR
Trigger: TCTGCGCACGGTCACTGTCCACCTGTACCGGGAGAC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCCTGCAGGTACTTCTaGCCCACTAGCTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASCRYF*PTSLRY
Trigger: GTACCTCAAGCTAGTGGGCCAGAAGTACCTGCAGGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGAGCTGCCCGCTACCTaGGGTGCTCAGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVELPAT*GAQCCV
Trigger: CACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCAGGTCATTGGTCCCTaGGAGCTGCCCGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVQVIGP*ELPATW
Trigger: CCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAEDQAR*LPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTC...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGCGTGCGGGCGTCCTaGAGGTCCACCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSSVRAS*RSTMER
Trigger: CCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGGTGTGGTTGGTGTCTaGCCTGCCCGCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELGVVGV*PARRTV
Trigger: CACGGTGCGGCGGGCAGGCCAGACACCAACCACACC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGGTGTGGTTGGTGTCTaGCCTGCCCGCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLGVVGV*PARRTV
Trigger: CACGGTGCGGCGGGCAGGCCAGACACCAACCACACC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLGAWCG*CLACPP
Trigger: CGGCGGGCAGGCCAGACACCAACCACACCAGGCACC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCGGAGGTGCCTGGTGTaGTTGGTGTCTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASRRCLV*LVSGLP
Trigger: GGGCAGGCCAGACACCAACCACACCAGGCACCTCCG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPWLQF*AVPLGG
Trigger: TCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACAACTGCGCGTTCATaGTCAAGAGCCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRTTARS*SRAKRL
Trigger: CAGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRCVVSS*HLNRVS
Trigger: TGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQCVVSS*HLNRVS
Trigger: TGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGARLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGACGCAGTATGGCTCTaGGCCACCCCTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEDAVWL*ATPPAH
Trigger: ATGTGCTGGAGGGGTGGCCCAGAGCCATACTGCGTC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGACGCAGTATGGCTCTaGGCCACCCCTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGDAVWL*ATPPAH
Trigger: ATGTGCTGGAGGGGTGGCCCAGAGCCATACTGCGTC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCAGGCACGAAGGCGCATaGGTGGGGACAAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRHEGA*VGTRQK
Trigger: CTTCTGTCTTGTCCCCACCCATGCGCCTTCGTGCCT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCAGGCACGAAGGCGCATaGGTGGGGACAAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGRHEGA*VGTRQK
Trigger: CTTCTGTCTTGTCCCCACCCATGCGCCTTCGTGCCT...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCCTGCAAGGGCAGCTaGCACCGGCCACAGCGGGTA +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKPCKGS*HRPQRV
Trigger: TACCCGCTGTGGCCGGTGCCAGCTGCCCTTGCAGGG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGGGGACCGGGGCGTGTaGAGCTGTAGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELGDRGV*SCSLGP
Trigger: AGGACCGAGGCTACAGCTCCACACGCCCCGGTCCCC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAACGCGGTGTGGGAGCTaGGGGGCTTTGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTTRCGS*GALWLS
Trigger: ACTCAGCCACAAAGCCCCCCAGCTCCCACACCGCGT...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTACAAAAGAGGGGAGCTaGGACGCGGTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLATKEGS*DAVWEL
Trigger: CAGCTCCCACACCGCGTCCCAGCTCCCCTCTTTTGT...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGTTAAAAGTCGCAGCTaGAGGGAGGAGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGVKSRS*REELQP
Trigger: GGGCTGGAGCTCCTCCCTCCAGCTGCGACTTTTAAC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACATCCCTGGCACAGGTGTaGGGGGACACATGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTSLAQV*GDTCTR
Trigger: CCGAGTGCATGTGTCCCCCCACACCTGTGCCAGGGA...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCAGCCTGGGCCTGTGTaGGAGGTGTGGGAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVQPGPV*EVWEAV
Trigger: CACAGCTTCCCACACCTCCCACACAGGCCCAGGCTG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCATGGGCAGGATGGTaGTGGTTTGGTAGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPWAGW*WFGSAP
Trigger: AGGCGCGCTACCAAACCATCACCATCCTGCCCATGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCAGGTAGTGGTTGGTaGTGTGCTCAGCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPGSGW*CAQRTL
Trigger: AAGAGTTCGCTGAGCACATCACCAACCACTACCTGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGCAGCGGTCCACCTCTaGCATCATCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGAAVHL*HHQVCQ
Trigger: CTGACAGACCTGATGATGTCAGAGGTGGACCGCTGC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTGTTCTCCCGGAAGATaGGGTGCTCGTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVCSPGR*GARCPR
Trigger: GCGGGGACAACGAGCACCTCATCTTCCGGGAGAACA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTCTGGCCCACTAGCTTaGGGTACTCCTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPSGPLA*GTPQWP
Trigger: AGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGTCTCCTGGGCATCAATaGTCTTCTGTTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRSPGHQ*SSVWSP
Trigger: TGGACTCCAAACAGAAGATCATTGATGCCCAGGAGA...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTGSGHS*GGHWRH
Trigger: ATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCAAGGATGCTGCTGTaGACGGGCTTGATGACCACC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPRMLL*TGLMTT
Trigger: GGTGGTCATCAAGCCCGTGCACAGCAGCATCCTTGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCACAGCTTCAGGATGTaGTCCACACGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGHSFRM*STRRLL
Trigger: CAACAGCCGGCGTGTGGAGCACATCCTGAAGCTGTG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCACCTAGGGCGTCCTaGAGGTACTTCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGESPRAS*RYFWPT
Trigger: AGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTTCACCTAGGGCGTCCTaGAGGTACTTCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLASPRAS*RYFWPT
Trigger: AGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGA...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAACCTGGGGTGCTCAGTaGTGTGTGGACGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTTWGAQ*CVDVPQ
Trigger: CTGAGGGACGTCCACACAGCACTGAGCACCCCAGGT...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKAAQLR*CCCQSP
Trigger: CGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPPWRGS*HRWPSE
Trigger: TTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCAACTCCTCGCTGTTaGTGTGTGAGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPTPRC*CVSSGS
Trigger: GCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCCAACTCCTCGCTGTTaGTGTGTGAGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAPTPRC*CVSSGS
Trigger: GCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTCCAGCACCAGCTTCTaGGTCGTCTCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVSSTSF*VVSSWH
Trigger: GTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGCCCTCCTCCAGCCGTaGCTGGTACTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLALLQP*LVLQHQ
Trigger: CTGGTGCTGGAGTACCAGGCACGGCTGGAGGAGGGC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTCCACAGCCGCTTaGATCTCTGCGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGESTAA*ISAWSF
Trigger: GAAGGACCACGCAGAGATGCAAGCGGCTGTGGACTC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAGCAGGTGCAGGCTGCTaGTGTCTTGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTAGAGC*CLGEGA
Trigger: TGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGC...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCGCCGAGGCCCTGGCTaGCCCACAAAGTCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSRRGPG*PTKSLK
Trigger: TTTGAGCGACTTTGTGGGGCAGCCAGGGCCTCGGCG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAGACCTCGCCTCACGCTaGTTCAGTCTCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTDLASR*FSLWWL
Trigger: GAGCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTC...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGAAGGTAGCAGGTGGTaGTCTGGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGEGSRW*SGDRFR
Trigger: TCTGAACCTGTCCCCAGAGCACCACCTGCTACCTTC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGGTTGCGGTCCAGCTTaGGCTGGCTCTTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSGCGPA*AGSWCA
Trigger: AGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAACCCCGGCAGGATGTaGCGGAAGCTGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSNPGRM*RKLWLR
Trigger: CCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVVSRYR*TVTVRR
Trigger: TCTGCGCACGGTCACTGTCCACCTGTACCGGGAGAC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCTCAATGGCCTTGGTaGCCAGTGTGTTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPQWPW*PVCSPG
Trigger: TCCGGGAGAACACACTGGCCACCAAGGCCATTGAGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCACTCCTCAATGGCCTTaGTGGCCAGTGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPTPQWP*WPVCSP
Trigger: GGGAGAACACACTGGCCACCAAGGCCATTGAGGAGT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTATCTTGAGGTTGCCCTaGTGCTCTGGGAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAILRLP*CSGRSA
Trigger: CGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGAT...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCTCTTTCAACTCCCGTaGGAAGACACAGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRLFQLP*EDTVGV
Trigger: AACTCCTACTGTGTCTTCCCACGGGAGTTGAAAGAG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGTGCTCAGTGCTGTGTaGACGTCCCTCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGVLSAV*TSLRIR
Trigger: TCGGATCCTGAGGGACGTCCACACAGCACTGAGCAC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGAGCTGCCCGCTACCTaGGGTGCTCAGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSELPAT*GAQCCV
Trigger: CACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCAGGTCATTGGTCCCTaGGAGCTGCCCGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSQVIGP*ELPATW
Trigger: CCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACGGAGGTGCCTGGTGTaGTTGGTGTCTGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTRRCLV*LVSGLP
Trigger: GGGCAGGCCAGACACCAACCACACCAGGCACCTCCG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPWYTGF*KESGAN
Trigger: GTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTGGTCGATCCTCCTCTaGGGGCCAGCACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVWSILL*GPALFC
Trigger: GCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELASGGY*GPPNQV
Trigger: CACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPWLQF*AVPLGG
Trigger: TCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCTCCAGCTTCTTGGTaGAGATTCGCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPPASW*RFAACP
Trigger: AGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: IWPDPPRSLASGSPRASARLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGGGTGGACGCAGTATaGCTCTGGGCCACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSRVDAV*LWATPP
Trigger: TGGAGGGGTGGCCCAGAGCCATACTGCGTCCACCCT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCCTGTGTGGCCACCCTaGTCTCAGGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELPVWPP*SQARRR
Trigger: GCGCCTTCGTGCCTGAGACCAGGGTGGCCACACAGG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTCCACCCCCACTTTCTaGGCAGTCGGAAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPSTPTF*AVGKSP
Trigger: AGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTTTCCCTGGACAGTCTaGCTCCCGCAGTCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASFPWTV*LPQSCG
Trigger: CCCGCACGACTGCGGGAGCCAGACTGTCCAGGGAAA...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTACAAAAGAGGGGAGCTaGGACGCGGTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVTKEGS*DAVWEL
Trigger: CAGCTCCCACACCGCGTCCCAGCTCCCCTCTTTTGT...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTAAACATTGTCCGTCTTaGGCTTGCCCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVKHCPS*ACPWCG
Trigger: CCCGCACCACGGGCAAGCTCAAGACGGACAATGTTT...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCATGGGCAGGATGGTaGTGGTTTGGTAGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPWAGW*WFGSAP
Trigger: AGGCGCGCTACCAAACCATCACCATCCTGCCCATGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLPPRQC*NFPAWQ
Trigger: CTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGAFFSQ*HLSPCQ
Trigger: CTGGCACGGCGACAGATGTCACTGACTGAAAAAGGC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGCCAGGGTTCCGCTTaGGGGTCTTGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKRQGSA*GSWVLQ
Trigger: CTGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCATTGGGGCTCACAGGTaGAGGGCCCTGCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASIGAHR*RALLVH
Trigger: GTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAAT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCGGCCGAGGGCTCCATaGTGGGGCTCTTCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELRPRAP*WGSSRK
Trigger: TTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGGCCG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR GCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCTTATCCCGCTCAGCTaGAGACCGGCAGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGELIPLS*RPAGKA
Trigger: TGCTTTTCCTGCCGGTCTGCAGCTGAGCGGGATAAG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCACAGCTTCAGGATGTaGTCCACACGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVHSFRM*STRRLL
Trigger: CAACAGCCGGCGTGTGGAGCACATCCTGAAGCTGTG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASTLPVL*RMCTRA
Trigger: TGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKLRLPW*SGRSAA
Trigger: GGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELLRLPW*SGRSAA
Trigger: GGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCGACTGCTGCACTCCTaGCTCCACGAGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSRLLHS*LHEANT
Trigger: GGTGTTTGCCTCGTGGAGGCAGGAGTGCAGCAGTCG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCATCAGGGTACTCCTaGAGCAGGTTGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSSGYS*SRLKSE
Trigger: CTCACTCTTCAACCTGCTGCAGGAGTACCCTGATGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGATGTTGGTCCACTCATaGTCTAGGAACTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRMLVHS*SRNWFM
Trigger: CATGAACCAGTTCCTAGAGCATGAGTGGACCAACAT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTCCCAGAGCAGTGAGTaGAGGCTGGAGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKSQSSE*RLESSR
Trigger: CCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCACCTGGGGTGCTCAGTaGTGTGTGGACGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASTWGAQ*CVDVPQ
Trigger: CTGAGGGACGTCCACACAGCACTGAGCACCCCAGGT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCTGAGATGCTGCTGCTaGCAGAGCCCGGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELLRCCC*QSPVWR
Trigger: CCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCAGCTGAGATGCTGCTaGTGCCAGAGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKQLRCC*CQSPVW
Trigger: CCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACAGCTGAGATGCTGCTaGTGCCAGAGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLQLRCC*CQSPVW
Trigger: CCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCAGCTGAGATGCTGCTaGTGCCAGAGCCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELQLRCC*CQSPVW
Trigger: CCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSITIF*SPAEML
Trigger: CAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSRGTVG*PPFSVS
Trigger: ACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGAAGGGCCCTGCTTGTaGACTGCCCGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSEGPCL*TARGFS
Trigger: ACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCTTC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGACAGGTGAAGGGCCCTaGTTGTGCACTGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELTGEGP*LCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCATTCGCAGCTTGTCCTaGAGCACCGCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPIRSLS*STARSF
Trigger: AAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAAT...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGGGGCAGGTGCAGGCTaGTGCTGTCTTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLGAGAG*CCLGEG
Trigger: TCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAGAGACCCAAGCTCCTaGTCATCTGTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGARDPSS*SSVLKV
Trigger: CACTTTCAAGACAGATGAGCAGGAGCTTGGGTCTCT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAGTGGCACATTCCAGCTaGAGGGGCAGAGGGGTGATT +
Preference number: 4 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTVAHSS*RGRGVI
Trigger: AATCACCCCTCTGCCCCTGCAGCTGGAATGTGCCAC...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGTTACGGGCTTGCATaGTGTACCTCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRYGLA*CTSLSA
Trigger: AGCTGAAAGAGAGGTACAGCATGCAAGCCCGTAACG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGATGCCGTTACGGGCTTaGATGCTGTACCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRMPLRA*MLYLSF
Trigger: GAAAGAGAGGTACAGCATGCAAGCCCGTAACGGCAT...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGGACACTGACCTCCTaGTCTGTGTCCTCCTATCTT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGTLTS*SVSSYL
Trigger: AAGATAGGAGGACACAGAGCAGGAGGTCAGTGTCCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGGCTGTTGTCCTTGTTaGGATGCACCGCTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASGCCPC*DAPLAG
Trigger: TCCGGCGAGCGGTGCATCCCAACAAGGACAACAGCC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCACAGGTACTTCTTCTTaGCTGGCAGGTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPTGTSS*LAGPWP
Trigger: AGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSVSRYR*TVTVRR
Trigger: TCTGCGCACGGTCACTGTCCACCTGTACCGGGAGAC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCTCAATGGCCTTGGTaGCCAGTGTGTTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPQWPW*PVCSPG
Trigger: TCCGGGAGAACACACTGGCCACCAAGGCCATTGAGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACTCCTCAATGGCCTTaGTGGCCAGTGTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGETPQWP*WPVCSP
Trigger: GGGAGAACACACTGGCCACCAAGGCCATTGAGGAGT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASRSRLY*RGSRGW
Trigger: CCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGAGCTGCCCGCTACCTaGGGTGCTCAGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELELPAT*GAQCCV
Trigger: CACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGWYTGF*KESGAN
Trigger: GTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACAGGTGGGGCCTCTGTaGCACATTCCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTQVGPL*HIPAAG
Trigger: CCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATCCCCGAGCTCAGGGTaGACGCAGTATGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTSPSSG*TQYGSG
Trigger: CCCAGAGCCATACTGCGTCCACCCTGAGCTCGGGGA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGTCTGTGATCCCTGGTaGCCCAGCCCTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKVCDPW*PSPSST
Trigger: GGTGGAGGAAGGGCTGGGCCACCAGGGATCACAGAC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGTCTGTGATCCCTGGTaGCCCAGCCCTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLVCDPW*PSPSST
Trigger: GGTGGAGGAAGGGCTGGGCCACCAGGGATCACAGAC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATTTCCCTGGACAGTCTaGCTCCCGCAGTCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLFPWTV*LPQSCG
Trigger: CCCGCACGACTGCGGGAGCCAGACTGTCCAGGGAAA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGACGCGGTGTGGGAGCTaGGGGGCTTTGTGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKTRCGS*GALWLS
Trigger: ACTCAGCCACAAAGCCCCCCAGCTCCCACACCGCGT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCACAAAAGAGGGGAGCTaGGACGCGGTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSTKEGS*DAVWEL
Trigger: CAGCTCCCACACCGCGTCCCAGCTCCCCTCTTTTGT...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGTTAAAAGTCGCAGCTaGAGGGAGGAGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVVKSRS*REELQP
Trigger: GGGCTGGAGCTCCTCCCTCCAGCTGCGACTTTTAAC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCCATGGGCAGGATGGTaGTGGTTTGGTAGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELPWAGW*WFGSAP
Trigger: AGGCGCGCTACCAAACCATCACCATCCTGCCCATGG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCCAGGTAGTGGTTGGTaGTGTGCTCAGCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGPGSGW*CAQRTL
Trigger: AAGAGTTCGCTGAGCACATCACCAACCACTACCTGG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATGTTCTCCCGGAAGATaGGGTGCTCGTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTCSPGR*GARCPR
Trigger: GCGGGGACAACGAGCACCTCATCTTCCGGGAGAACA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATGTTCTCCCGGAAGATaGGGTGCTCGTTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLCSPGR*GARCPR
Trigger: GCGGGGACAACGAGCACCTCATCTTCCGGGAGAACA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGCTCGCAGCACATCTTaGGGTTGCCCTGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELARSTS*GCPGAL
Trigger: CAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKLLQPS*DAAAAR
Trigger: TCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTCTCCTCCTGGCACTTaGACAGGGTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSPPGT*TGSHTP
Trigger: AGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTCACCTAGGGCGTCCTaGAGGTACTTCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSSPRAS*RYFWPT
Trigger: AGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCAGCGGCCGAGCACTTaGTGGGATCCACTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELQRPST*WDPLRS
Trigger: ACTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTCATCAGGGTACTCCTaGAGCAGGTTGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGSSGYS*SRLKSE
Trigger: CTCACTCTTCAACCTGCTGCAGGAGTACCCTGATGA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAATGTTGGTCCACTCATaGTCTAGGAACTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAMLVHS*SRNWFM
Trigger: CATGAACCAGTTCCTAGAGCATGAGTGGACCAACAT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTCCAGCAGGAAGCGCTaGATGTTGGTCCACTCATGC +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVSSRKR*MLVHSC
Trigger: GCATGAGTGGACCAACATGCAGCGCTTCCTGCTGGA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGSITIF*SPAEML
Trigger: CAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVPWRGS*HRWPSE
Trigger: TTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELRGTVG*PPFSVS
Trigger: ACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGCCCTGCTTGTGCACTaGCCGTGGCTTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKALLVH*PWLQFW
Trigger: CCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATCCAGCACCAGCTTCTaGGTCGTCTCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLSSTSF*VVSSWH
Trigger: GTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATCCAGCACCAGCTTCTaGGTCGTCTCCTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTSSTSF*VVSSWH
Trigger: GTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCATCCAACGAGGCAATaGGCTTCTCCTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGHPTRQ*ASPGHQ
Trigger: TTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGCAGGTGCAGGCTGCTaGTGTCTTGGAGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELAGAGC*CLGEGA
Trigger: TGCTCCCTCTCCAAGACAGCAGCAGCCTGCACCTGC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLAPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCGTTCTCAGTAATCTaGAATTTGGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQPFSVI*NLVGLV
Trigger: CACCAACCCCACCAAATTGCAGATTACTGAGAACGG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGTCTCCATGAGCGTCTaGGTTCCTCCTTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQVSMSV*VPPFVF
Trigger: GAATACAAAAGGAGGAACCCAGACGCTCATGGAGAC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCGGTCCAGCTTGGGCTaGCTCTTGGTGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELRSSLG*LLVRLM
Trigger: CATCAAGCGCACCAAGAGCCAGCCCAAGCTGGACCG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTLSRDS*ERDSFS
Trigger: GCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTRSRLY*RGSRGW
Trigger: CCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGCAGGGGTCCCAGTTTaGATACTATGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGAGVPV*ILCSAP
Trigger: TGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGEDQAR*LPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVGSCHR*PSEDQA
Trigger: AGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCCTCCAGCTTCTTGGTaGAGATTCGCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGPPASW*RFAACP
Trigger: AGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCCTCCAGCTTCTTGGTaGAGATTCGCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEPPASW*RFAACP
Trigger: AGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCTCCCATCTTCCTGTaGTCTGTGATCCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPPIFL*SVIPGG
Trigger: GCCACCAGGGATCACAGACCACAGGAAGATGGGAGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTAGCAGGGAGGGCGTaGCTTTCTCCAGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKLAGRA*LSPAEA
Trigger: AGCCTCTGCTGGAGAAAGCCACGCCCTCCCTGCTAG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGACAAAAGAGGGGAGCTaGGACGCGGTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKTKEGS*DAVWEL
Trigger: CAGCTCCCACACCGCGTCCCAGCTCCCCTCTTTTGT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCTCTGGAGCCAGATCTaGCTTCCGAAGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASLWSQI*LPKMAR
Trigger: CCTGGCCATCTTCGGAAGCCAGATCTGGCTCCAGAG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTTTGGTAGCGCGCCTTaGTGCGGATCATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKFGSAP*CGSWVQ
Trigger: CTGGACCCATGATCCGCATCAAGGCGCGCTACCAAA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATTTGGTAGCGCGCCTTaGTGCGGATCATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTFGSAP*CGSWVQ
Trigger: CTGGACCCATGATCCGCATCAAGGCGCGCTACCAAA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCAGCGGTCCACCTCTaGCATCATCAGGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTAAVHL*HHQVCQ
Trigger: CTGACAGACCTGATGATGTCAGAGGTGGACCGCTGC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTAGGAACTGGTTCATaGAGGACATGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLGTGS*RTCIPP
Trigger: AGGAGGAATACATGTCCTTCATGAACCAGTTCCTAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGETVTG*NLSDRK
Trigger: TTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTCTCCTGGGCATCAATaGTCTTCTGTTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGSPGHQ*SSVWSP
Trigger: TGGACTCCAAACAGAAGATCATTGATGCCCAGGAGA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCCAAGGATGCTGCTGTaGACGGGCTTGATGACCACC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELPRMLL*TGLMTT
Trigger: GGTGGTCATCAAGCCCGTGCACAGCAGCATCCTTGG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTTGTCCTTGTTGGGATaGACCGCTCGCCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKLSLLG*TARRRF
Trigger: GAACCTCCGGCGAGCGGTGCATCCCAACAAGGACAA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCACAGCTTCAGGATGTaGTCCACACGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELHSFRM*STRRLL
Trigger: CAACAGCCGGCGTGTGGAGCACATCCTGAAGCTGTG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTCATCAGGGTACTCCTaGAGCAGGTTGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSSGYS*SRLKSE
Trigger: CTCACTCTTCAACCTGCTGCAGGAGTACCCTGATGA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPWRGS*HRWPSE
Trigger: TTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACCTCCCCATCCAGCGTaGGGGCGTCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKPPHPA*GRPGGP
Trigger: TGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACCAACTCCTCGCTGTTaGTGTGTGAGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTPTPRC*CVSSGS
Trigger: GCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGAGGGTCTTGGGTACTaGAGGGTGCTCAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTEGLGY*RVLSRL
Trigger: CAACCTGCTGAGCACCCTGCAGTACCCAAGACCCTC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCGCCAGGTCCTTTTCTaGTTGGCTGAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSRQVLF*LAELVL
Trigger: AAGGACGAGCTCAGCCAAGCAGAAAAGGACCTGGCG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCATTCGCAGCTTGTCCTaGAGCACCGCCAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASIRSLS*STARSF
Trigger: AAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAAT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGAGTCCACAGCCGCTTaGATCTCTGCGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELESTAA*ISAWSF
Trigger: GAAGGACCACGCAGAGATGCAAGCGGCTGTGGACTC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCAGAGACCCAAGCTCCTaGTCATCTGTCTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGRDPSS*SSVLKV
Trigger: CACTTTCAAGACAGATGAGCAGGAGCTTGGGTCTCT...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 4 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTCCTATCTTCCTGCCTaGCAACTGATCTGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSYLPA*QLICQV
Trigger: CACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAAGCCTCGGCATCAGATaGGACCTCTCATTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLSLGIR*DLSLSA
Trigger: CGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGATCTTGAGGTTGCCCTaGTGCTCTGGGAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKILRLP*CSGRSA
Trigger: CGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGAT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAATCTTGAGGTTGCCCTaGTGCTCTGGGAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTILRLP*CSGRSA
Trigger: CGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGAT...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGTGCTCAGTGCTGTGTaGACGTCCCTCAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTVLSAV*TSLRIR
Trigger: TCGGATCCTGAGGGACGTCCACACAGCACTGAGCAC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSGSCHR*PSEDQA
Trigger: AGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAGCACTGTTCTGCCGTaGCACCGTGGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSTVLP*HRGLPA
Trigger: GGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTTGTGCACTGCCCGTaGCTTCAGTTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKLVHCP*LQFWAV
Trigger: GACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGACTCCTCCAGCTTCTTaGTGGAGATTCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RPALGSTRTKGYVQPLGETPPAS*WRFAAC
Trigger: ACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCAATGCGCTTCTCCTaGGCATCAATGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGAMRFS*ASMIFC
Trigger: ACAGAAGATCATTGATGCCCAGGAGAAGCGCATTGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGCAATGCGCTTCTCCTaGGCATCAATGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPAMRFS*ASMIFC
Trigger: ACAGAAGATCATTGATGCCCAGGAGAAGCGCATTGC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAAGGCACGAAGGCGCATaGGTGGGGACAAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLRHEGA*VGTRQK
Trigger: CTTCTGTCTTGTCCCCACCCATGCGCCTTCGTGCCT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGTGAAGGCACCCCAGTaGCCACTACTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTVKAPQ*PLLRQQ
Trigger: CTGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCAC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGTGAAGGCACCCCAGTaGCCACTACTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKVKAPQ*PLLRQQ
Trigger: CTGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCAC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGTGAAGGCACCCCAGTaGCCACTACTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELVKAPQ*PLLRQQ
Trigger: CTGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCAC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTCCACCCCCACTTTCTaGGCAGTCGGAAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASSTPTF*AVGKSP
Trigger: AGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGA...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGTTAAAAGTCGCAGCTaGAGGGAGGAGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELVKSRS*REELQP
Trigger: GGGCTGGAGCTCCTCCCTCCAGCTGCGACTTTTAAC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACAGGTTCAGAGGGGGTaGGTGGGTAGGAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTQVQRG*VGRNPQ
Trigger: CTGAGGATTCCTACCCACCCACCCCCTCTGAACCTG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGCCTCTCTGCTGACCTaGTTCTGGGCACTTGCAACC +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKASLLT*FWALAT
Trigger: GGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGCCCCACCTGATTTATaGACCGAGGCTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLAPPDL*TEAVSM
Trigger: CATGGAGACAGCCTCGGTTCATAAATCAGGTGGGGC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR TCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGGTACAGGTGGACAGTaGCCGTGCGCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKGTGGQ*PCAEAA
Trigger: TGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTCTGGCCCACTAGCTTaGGGTACTCCTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELSGPLA*GTPQWP
Trigger: AGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTCCTGGGCATCAATaGTCTTCTGTTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KADTVLRAIWPDPPRSLASPGHQ*SSVWSP
Trigger: TGGACTCCAAACAGAAGATCATTGATGCCCAGGAGA...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKGSGHS*GGHWRH
Trigger: ATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGTGTACAACCATTAGGTaGGATAGTTACATTACAGTC +
Preference number: 4 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRCTTIR*DSYITV
Trigger: GACTGTAATGTAACTATCTCACCTAATGGTTGTACA...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCTTATCCCGCTCAGCTaGAGACCGGCAGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELLIPLS*RPAGKA
Trigger: TGCTTTTCCTGCCGGTCTGCAGCTGAGCGGGATAAG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATCCAGCAGGAAGCGCTaGATGTTGGTCCACTCATGC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLSSRKR*MLVHSC
Trigger: GCATGAGTGGACCAACATGCAGCGCTTCCTGCTGGA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKARPRR*LVWLVS
Trigger: AGACACCAACCACACCAGGCACCTCCGAGGGCGCGC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTCGTCTTCTAACAACTaGGCGTTCATGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGSSSNN*AFMVKS
Trigger: GCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGAAGGTCCCAACAGGCTaGATGCAGTGGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELKVPTG*MQWQVL
Trigger: AAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASVLLLG*QVLGLD
Trigger: ATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTAC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTCCTGCAGGTACTTCTaGCCCACTAGCTTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSSCRYF*PTSLRY
Trigger: GTACCTCAAGCTAGTGGGCCAGAAGTACCTGCAGGA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCCTCTTTCAACTCCCGTaGGAAGACACAGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPLFQLP*EDTVGV
Trigger: AACTCCTACTGTGTCTTCCCACGGGAGTTGAAAGAG...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGGAAGCGCTGCATGTTaGTCCACTCATGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSGSAAC*STHALG
Trigger: TCCTAGAGCATGAGTGGACCAACATGCAGCGCTTCC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGGAAGCGCTGCATGTTaGTCCACTCATGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASGSAAC*STHALG
Trigger: TCCTAGAGCATGAGTGGACCAACATGCAGCGCTTCC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGCAGGGGTCCCAGTTTaGATACTATGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASAGVPV*ILCSAP
Trigger: TGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGCAGGGGTCCCAGTTTaGATACTATGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSAGVPV*ILCSAP
Trigger: TGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASEDQAR*LPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKASGGY*GPPNQV
Trigger: CACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGACAACTGCGCGTTCATaGTCAAGAGCCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKTTARS*SRAKRL
Trigger: CAGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCCTCCAGCTTCTTGGTaGAGATTCGCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASPPASW*RFAACP
Trigger: AGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATTCAGAGGGGGTGGGTaGGTAGGAATCCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLFRGGG*VGILSS
Trigger: GGAACTGAGGATTCCTACCCACCCACCCCCTCTGAA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATCTCCTCCTGGCACTTaGACAGGGTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLSPPGT*TGSHTP
Trigger: AGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCGAAAGGCACGTGCTaGATCTGTGTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKPKGTC*ICVFQA
Trigger: AGCTTGGAAGACACAGATTCAGCACGTGCCTTTCGG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATCCCAGAGCAGTGAGTaGAGGCTGGAGAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSQSSE*RLESSR
Trigger: CCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACATCCAACGAGGCAATaGGCTTCTCCTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTHPTRQ*ASPGHQ
Trigger: TTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGGGGCAGGTGCAGGCTaGTGCTGTCTTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKGAGAG*CCLGEG
Trigger: TCCCTCTCCAAGACAGCAGCAGCCTGCACCTGCCCC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCCTTTGCTCAGAATCTaGAGGGGCTGGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELPLLRI*RGWEQT
Trigger: TGTCTGTTCCCAGCCCCTGCAGATTCTGAGCAAAGG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTTACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 4 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAACCCCGGCAGGATGTaGCGGAAGCTGTGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKNPGRM*RKLWLR
Trigger: CCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKVLLLG*QVLGLD
Trigger: ATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTAC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACAGGTCATTGGTCCCTaGGAGCTGCCCGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKQVIGP*ELPATW
Trigger: CCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKCQSPV*RPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACGGCCTGCCCATCTGTaGGGAGGACGTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRPAHL*GGRRGP
Trigger: CGGGCCCCGACGTCCTCCCCACAGATGGGCAGGCCG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSAVAP*AARLFQ
Trigger: CTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGAGGCTGCTGCTGTCTTaGAGAGGGAGCAAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELRLLLS*RGSKSN
Trigger: GTTAGACTTGCTCCCTCTCCAAGACAGCAGCAGCCT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKTLPVL*RMCTRA
Trigger: TGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCACATGTATTCCTCCTTaGTGCCAAATTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPTCIPP*CQIWQS
Trigger: ACTTTGCCAAATTTGGCAGCAAGGAGGAATACATGT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAACCTGGGGTGCTCAGTaGTGTGTGGACGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKTWGAQ*CVDVPQ
Trigger: CTGAGGGACGTCCACACAGCACTGAGCACCCCAGGT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGTTGGTGTCTGGCCTaGCCGCCGCACCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGWCLA*PPHRGQ
Trigger: CTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGAAGGGCCCTGCTTGTaGACTGCCCGTGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKEGPCL*TARGFS
Trigger: ACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCTTC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTCGTCTTCTAACAACTaGGCGTTCATGGTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASSSSNN*AFMVKS
Trigger: GCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGA...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKLSRDS*ERDSFS
Trigger: GCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGGCTGTTGTCCTTGTTaGGATGCACCGCTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKGCCPC*DAPLAG
Trigger: TCCGGCGAGCGGTGCATCCCAACAAGGACAACAGCC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKWLAGP*PRSPTA
Trigger: AGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCTCTTTCAACTCCCGTaGGAAGACACAGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASLFQLP*EDTVGV
Trigger: AACTCCTACTGTGTCTTCCCACGGGAGTTGAAAGAG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCCTTGCTGCCAAATTTaGCAAAGTTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSPCCQI*QSWPGS
Trigger: AGAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCCTTGCTGCCAAATTTaGCAAAGTTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASPCCQI*QSWPGS
Trigger: AGAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGTGGGGGCGGAGGCTaGTCGATCCTCCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGGGGG*SILLWG
Trigger: CCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGAGGTCCTTTTCTGCTTaGCTGAGCTCGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELRSFSA*LSSSLL
Trigger: GAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGACTCCTCCAGCTTCTTaGTGGAGATTCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKTPPAS*WRFAAC
Trigger: ACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATCCCGGTGCTCTTCCTaGCGCTGCCGCCCGCGGACA +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRSRCSS*RCRPRT
Trigger: TGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCACAAGAAAAAGCCATaGCCCTCACTGGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSHKKKP*PSLGLS
Trigger: AGATAGACCCAGTGAGGGCCATGGCTTTTTCTTGTG...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAGGGTGAGCACCAGGTaGCACTCCCTACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKRVSTR*HSLQDH
Trigger: GTGGTCCTGTAGGGAGTGCCACCTGGTGCTCACCCT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACACAGCTTCAGGATGTaGTCCACACGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKHSFRM*STRRLL
Trigger: CAACAGCCGGCGTGTGGAGCACATCCTGAAGCTGTG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGTATTCCTCCTTaGTGCCAAATTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SVSSYLPACQLICQVPGPTCIPP*CQIWQS
Trigger: ACTTTGCCAAATTTGGCAGCAAGGAGGAATACATGT...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACTGGAAGGAGAGCGGTaGCAACAGCTGGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRLEGER*QQLGPA
Trigger: GGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATCCTTGTCCTCCTGCTaGCGCCGCAGCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRSLSSC*RRSRSS
Trigger: CGAGGAGCGGCTGCGGCGGCAGCAGGAGGACAAGGA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGCCCTGCCCTGGCTCTaGTGGCAAAGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRALPWL*WQRPHS
Trigger: GGAGTGGGGCCTTTGCCAGCAGAGCCAGGGCAGGGC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCCGTTCTCAGTAATCTaGAATTTGGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELPFSVI*NLVGLV
Trigger: CACCAACCCCACCAAATTGCAGATTACTGAGAACGG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATGCCGCCCTTGGGGTTaGGCGTCACCACCGGGTACC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRCRPWG*ASPPGT
Trigger: GGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACTCTTTCAACTCCCGTaGGAAGACACAGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTLFQLP*EDTVGV
Trigger: AACTCCTACTGTGTCTTCCCACGGGAGTTGAAAGAG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCTTGCTGCCAAATTTaGCAAAGTTGGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKPCCQI*QSWPGS
Trigger: AGAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGCAATGCGCTTCTCCTaGGCATCAATGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLAMRFS*ASMIFC
Trigger: ACAGAAGATCATTGATGCCCAGGAGAAGCGCATTGC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACACAAGAAAAAGCCATaGCCCTCACTGGGTCTATCT +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLHKKKP*PSLGLS
Trigger: AGATAGACCCAGTGAGGGCCATGGCTTTTTCTTGTG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGTACAGGTGGACAGTaGCCGTGCGCAGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGTGGQ*PCAEAA
Trigger: TGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACTAGGAACTGGTTCATaGAGGACATGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLICLESGGGADKLQNSLLGTGS*RTCIPP
Trigger: AGGAGGAATACATGTCCTTCATGAACCAGTTCCTAG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGSGHS*GGHWRH
Trigger: ATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTGTATTCCTCCTTGCTaGCAAATTTGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLICLESGGGADKLQNSCIPPC*QIWQSW
Trigger: CCAACTTTGCCAAATTTGGCAGCAAGGAGGAATACA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGATGTTGGTCCACTCATaGTCTAGGAACTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKMLVHS*SRNWFM
Trigger: CATGAACCAGTTCCTAGAGCATGAGTGGACCAACAT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATTGGTCCCTGGGAGCTaGCCGCTACCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRLVPGS*PLPGVL
Trigger: GAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGCCCTCCTCCAGCCGTaGCTGGTACTCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRALLQP*LVLQHQ
Trigger: CTGGTGCTGGAGTACCAGGCACGGCTGGAGGAGGGC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAAGCGTGCGGGCGTCCTaGAGGTCCACCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRSVRAS*RSTMER
Trigger: CCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAACAACTGCGCGTTCATaGTCAAGAGCCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKTTARS*SRAKRL
Trigger: CAGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACGCCAGGGTTCCGCTTaGGGGTCTTGGGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRQGSA*GSWVLQ
Trigger: CTGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATGGGCAATGGGAGGATaGGACTGGAGCCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRWAMGG*DWSQAL
Trigger: CAGGGCCTGGCTCCAGTCTCATCCTCCCATTGCCCA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRLRLPW*SGRSAA
Trigger: GGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTGTATTCCTCCTTGCTaGCAAATTTGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKCIPPC*QIWQSW
Trigger: CCAACTTTGCCAAATTTGGCAGCAAGGAGGAATACA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTGTATTCCTCCTTGCTaGCAAATTTGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ICLESGGGADKLQNSLELCIPPC*QIWQSW
Trigger: CCAACTTTGCCAAATTTGGCAGCAAGGAGGAATACA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCACATGTATTCCTCCTTaGTGCCAAATTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASTCIPP*CQIWQS
Trigger: ACTTTGCCAAATTTGGCAGCAAGGAGGAATACATGT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGCAGGGGTCCCAGTTTaGATACTATGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKAGVPV*ILCSAP
Trigger: TGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACAGGTGGGGCCTCTGTaGCACATTCCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRQVGPL*HIPAAG
Trigger: CCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATTTCCCTGGACAGTCTaGCTCCCGCAGTCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRFPWTV*LPQSCG
Trigger: CCCGCACGACTGCGGGAGCCAGACTGTCCAGGGAAA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATCCCTGGCACAGGTGTaGGGGGACACATGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRSLAQV*GDTCTR
Trigger: CCGAGTGCATGTGTCCCCCCACACCTGTGCCAGGGA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACGACTGCTGCACTCCTaGCTCCACGAGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRLLHS*LHEANT
Trigger: GGTGTTTGCCTCGTGGAGGCAGGAGTGCAGCAGTCG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAACATGTATTCCTCCTTaGTGCCAAATTTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTTCIPP*CQIWQS
Trigger: ACTTTGCCAAATTTGGCAGCAAGGAGGAATACATGT...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAATGTGGCGGAAGCTGTaGTTGCGGTCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRMWRKL*LRSSLG
Trigger: GCCCAAGCTGGACCGCAACCACAGCTTCCGCCACAT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATGGTCGATCCTCCTCTaGGGGCCAGCACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRWSILL*GPALFC
Trigger: GCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAGCCATGGCCCTCACTaGGTCTATCTGGCAATACAA +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSHGPH*VYLAIQ
Trigger: TTGTATTGCCAGATAGACCCAGTGAGGGCCATGGCT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATTGTCCTTGTTGGGATaGACCGCTCGCCGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRLSLLG*TARRRF
Trigger: GAACCTCCGGCGAGCGGTGCATCCCAACAAGGACAA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACTAGGAACTGGTTCATaGAGGACATGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKLGTGS*RTCIPP
Trigger: AGGAGGAATACATGTCCTTCATGAACCAGTTCCTAG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRAFFSQ*HLSPCQ
Trigger: CTGGCACGGCGACAGATGTCACTGACTGAAAAAGGC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGCCGCTATTTCCCATaGAGTGCGCACGCTCAACTT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGRYFP*SAHAQL
Trigger: AAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATACTCAGACAGCAGCTaGAAAGCCAACACACAAATG +
Preference number: 4 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKYSDSS*KANTQM
Trigger: CATTTGTGTGTTGGCTTTGCAGCTGCTGTCTGAGTA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAAAGGTCCCAACAGGCTaGATGCAGTGGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRKVPTG*MQWQVL
Trigger: AAGCACCTGCCACTGCATGCAGCCTGTTGGGACCTT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGAAGGTAGCAGGTGGTaGTCTGGGGACAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGREGSRW*SGDRFR
Trigger: TCTGAACCTGTCCCCAGAGCACCACCTGCTACCTTC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAACAACTGCGCGTTCATaGTCAAGAGCCAAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRTTARS*SRAKRL
Trigger: CAGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR TCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACCAGGTAGTGGTTGGTaGTGTGCTCAGCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRPGSGW*CAQRTL
Trigger: AAGAGTTCGCTGAGCACATCACCAACCACTACCTGG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR GCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACATCCAACGAGGCAATaGGCTTCTCCTGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRHPTRQ*ASPGHQ
Trigger: TTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAACAGGTACTTCTTCTTaGCTGGCAGGTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRTGTSS*LAGPWP
Trigger: AGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGAAGCGCTGCATGTTaGTCCACTCATGCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGSAAC*STHALG
Trigger: TCCTAGAGCATGAGTGGACCAACATGCAGCGCTTCC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAAGGTCCTTTTCTGCTTaGCTGAGCTCGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRSFSA*LSSSLL
Trigger: GAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CCA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAACTCCTCCAGCTTCTTaGTGGAGATTCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRTPPAS*WRFAAC
Trigger: ACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp AGGACCTCCCGGTGCTCTTCCTGGCGCTGCCGCCCGCGGACATGCTaGCGCCCGCCGGGCACCGGGCCGGGCCTGGGCGCGCTCACACGG +
Preference number: 5 (lower is better)
Translates to: RTSRCSSWRCRPRTC*RPPGTGPGLGALTR
Trigger: CCGTGTGAGCGCGCCCAGGCCCGGCCCGGTGCCCGGCGGGCGGCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS GCA 90 bp AGCTCCCATCTCGGACGGCCTCGGCAGTGCCTCGGCCAGCGGGCCTaGCACCCTCCGCGGCACCTGTGGGGCCAGCGCGGTGCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SSHLGRPRQCLGQRA*HPPRHLWGQRGARG
Trigger: GCCGCGGGCACCGCGCTGGCCCCACAGGTGCCGCGGAGGGTGGCAGGCCCGCTGGCCGAGGCACTGCCGAGGCCGTCCGAGATGGGAGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489314.1
CDS-3UTR CAA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRPGSLG*PGPATR
Trigger: CCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGG...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp GCAGCCGGTAGTAGTAGGAGGACCTCCCGGTGCTCTTCCTGGCGCTaGCGCCCGCGGACATGCTGCCGCCCGCCGGGCACCGGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: AAGSSRRTSRCSSWR*RPRTCCRPPGTGPG
Trigger: GCCCGGCCCGGTGCCCGGCGGGCGGCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCTCCTACTACTACCGGCTGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS GCA 90 bp GCGGAAGGAGGCACCGCCAGCTCCCATCTCGGACGGCCTCGGCAGTaGCTCGGCCAGCGGGCCTGCCACCCTCCGCGGCACCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: AEGGTASSHLGRPRQ*LGQRACHPPRHLWG
Trigger: GCCCCACAGGTGCCGCGGAGGGTGGCAGGCCCGCTGGCCGAGGCACTGCCGAGGCCGTCCGAGATGGGAGCTGGCGGTGCCTCCTTCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489314.1
CDS CCA 90 bp CGGTGCCAACAGCTGGGGCCGGCCTGGCGCGCCCTCGGAGGTGCCTaGTGTGGTTGGTGTCTGGCCTGCCCGCCGCACCGTGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RCQQLGPAWRALGGA*CGWCLACPPHRGQP
Trigger: GGGCTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp GCCGGGGCCGCCTCAGCAGCCGGTAGTAGTAGGAGGACCTCCCGGTaGTCTTCCTGGCGCTGCCGCCCGCGGACATGCTGCCGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: AGAASAAGSSRRTSR*SSWRCRPRTCCRPP
Trigger: CGGCGGGCGGCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCTCCTACTACTACCGGCTGCTGAGGCGGCCCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRGPLPP*GLGVTT
Trigger: GGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEGPLPP*GLGVTT
Trigger: GGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: LLTPALGLQPWVPPQAETPGSLG*PGPATR
Trigger: CCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp AGAGCGGTGCCAACAGCTGGGGCCGGCCTGGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCTGGCCTGCCCGCCGCACCGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RAVPTAGAGLARPRR*LVWLVSGLPAAPWP
Trigger: TGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCGCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp CGGAGGTGCCTGGTGTGGTTGGTGTCTGGCCTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCACTGGGGTTGCCCGGGCCGGCCACC +
Preference number: 5 (lower is better)
Translates to: RRCLVWLVSGLPAAP*PALPGSLGLPGPAT
Trigger: GGTGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GCCTCAGCAGCCGGTAGTAGTAGGAGGACCTCCCGGTGCTCTTCCTaGCGCTGCCGCCCGCGGACATGCTGCCGCCCGCCGGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: ASAAGSSRRTSRCSS*RCRPRTCCRPPGTG
Trigger: CCCGGTGCCCGGCGGGCGGCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCTCCTACTACTACCGGCTGCTGAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAAGATGGGACCTCTCATaGTCCGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARWDLS*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAATGGGTCCAGGGCCCTaGCCGCCCTTGGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAMGPGP*PPLGLG
Trigger: GCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCAT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGATGGGTCCAGGGCCCTaGCCGCCCTTGGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SGREGRLGLLTPALGLQPMGPGP*PPLGLG
Trigger: GCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCAT...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGTTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTAC +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAELPPLG*GVTTGY
Trigger: GTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAA...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SGREGRLGLLTPALGLQPVEARS*VPGSCP
Trigger: CGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCAC...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLPGSLG*PGPATR
Trigger: CCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGG...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARCLVW*VSGLPA
Trigger: GGCGGGCAGGCCAGACACCAACCACACCAGGCACCT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: GREGRLGLLTPALGLQPWAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp TTGTCCGCGGCGGCGGCGGCGGCGCTCCGGAACCCCGGCAGGATGTaGCGGAAGCTGTGGTTGCGGTCCAGCTTGGGCTGGCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LSAAAAAALRNPGRM*RKLWLRSSLGWLLV
Trigger: CACCAAGAGCCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTTCCGGAGCGCCGCCGCCGCCGCCGCGGACAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CCA 90 bp CGGGGTGACAGCGGCAGGCCAGCCGCCATCTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAACAGCTGGGGCCGGCCTGGCGCGCCC +
Preference number: 5 (lower is better)
Translates to: RGDSGRPAAIWYTGF*KESGANSWGRPGAP
Trigger: GGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCAGATGGCGGCTGGCCTGCCGCTGTCACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGCGGCTGTTGTCCTTGTaGGGATGCACCGCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: SGREGRLGLLTPALGLQPRLLSL*GCTARR
Trigger: CCGGCGAGCGGTGCATCCCAACAAGGACAACAGCCG...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGCGGCTGTTGTCCTTGTaGGGATGCACCGCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAERLLSL*GCTARR
Trigger: CCGGCGAGCGGTGCATCCCAACAAGGACAACAGCCG...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACGCCGGCTGTTGTCCTaGTTGGGATGCACCGCTCGC +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARRLLS*LGCTAR
Trigger: GCGAGCGGTGCATCCCAACAAGGACAACAGCCGGCG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRGPLPP*GLGVTT
Trigger: GGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCAAGATGAGGTGCTCGTaGTCCCCGCAGCGGTCCACC +
Preference number: 5 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRKMRCS*SPQRST
Trigger: GGTGGACCGCTGCGGGGACAACGAGCACCTCATCTT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPVEARS*VPGSCP
Trigger: CGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCAC...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LLTPALGLQPWVPPQAETVEARS*VPGSCP
Trigger: CGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCAC...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGGTGAAGGGCCCTGCTaGTGCACTGCCCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEGEGPC*CTARGF
Trigger: GAAGCCACGGGCAGTGCACAAGCAGGGCCCTTCACC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGTGAAGGGCCCTGCTaGTGCACTGCCCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRGEGPC*CTARGF
Trigger: GAAGCCACGGGCAGTGCACAAGCAGGGCCCTTCACC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACCTGGTTCTGGGCACTaGCAACCCCCGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAAPGSGH*QPPRLW
Trigger: CCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCAAGATGAGGTGCTCGTaGTCCCCGCAGCGGTCCACC +
Preference number: 5 (lower is better)
Translates to: DTRAGAATVGASPGRDPAKMRCS*SPQRST
Trigger: GGTGGACCGCTGCGGGGACAACGAGCACCTCATCTT...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCAGCGGCCGAGCACTaGCTGGGATCCACTTCGCAG +
Preference number: 5 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSAAEH*LGSTSQ
Trigger: CTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCAGCGGCCGAGCACTaGCTGGGATCCACTTCGCAG +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSAAEH*LGSTSQ
Trigger: CTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GREGRLGLLTPALGLQPWVEIRS*SCSTAR
Trigger: CCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCAC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLVEIRS*SCSTAR
Trigger: CCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCAC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCTCATGAGGCGGGCATaGGCGGCATCCAACGAGGCA +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVLMRRA*AASNEA
Trigger: TGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACTCATGAGGCGGGCATaGGCGGCATCCAACGAGGCA +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAALMRRA*AASNEA
Trigger: TGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAG...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp GCGTGGCGGCCGAGGGCTCCATGCTGGGGCTCTTCTCGGAAAGGCTaGCAGGCAGGCTGCGCCGAGAGCCCGGCCTTTCTTGAGGCGACT +
Preference number: 5 (lower is better)
Translates to: AWRPRAPCWGSSRKG*QAGCAESPAFLEAT
Trigger: AGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGGCCGCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000465078.1
ENST00000489314.1
CDS CCA 90 bp GCGGCGGCGGCGCTCCGGAACCCCGGCAGGATGTGGCGGAAGCTGTaGTTGCGGTCCAGCTTGGGCTGGCTCTTGGTGCGCTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAAALRNPGRMWRKL*LRSSLGWLLVRLME
Trigger: CTCCATCAAGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTTCCGGAGCGCCGCCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CCA 90 bp CACAGGGTTCTGGAAGGAGAGCGGTGCCAACAGCTGGGGCCGGCCTaGCGCGCCCTCGGAGGTGCCTGGTGTGGTTGGTGTCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HRVLEGERCQQLGPA*RALGGAWCGWCLAC
Trigger: GCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAGAACCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GATGGGACCATCCCTCAGCATAGCCACCAGGCTCGGGAAGCCGAGTaGCCGGGCGAGCCTTCCTGCTGTCCGCTGCTCCTGGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: DGTIPQHSHQAREAE*PGEPSCCPLLLAGP
Trigger: GGGGCCAGCCAGGAGCAGCGGACAGCAGGAAGGCTCGCCCGGCCACTCGGCTTCCCGAGCCTGGTGGCTATGCTGAGGGATGGTCCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648693.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCTGCTGTGCACGGGCTaGATGACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVLLCTG*MTTSSS
Trigger: GGAGGAAGAGGTGGTCATCAAGCCCGTGCACAGCAG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCCACACGCCGGCTGTaGTCCTTGTTGGGATGCACC +
Preference number: 5 (lower is better)
Translates to: GEARPPDTRAGAATVGASSTRRL*SLLGCT
Trigger: GGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGTCCACACGCCGGCTGTaGTCCTTGTTGGGATGCACC +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLSTRRL*SLLGCT
Trigger: GGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGA...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTTGGCTGGCAGGTCCTaGGCCTCGATCACCCACAGC +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPLAGRS*ASITHS
Trigger: GCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCATCTCCTCCTTGGTCTaGGCACTGAGGATGGGCTCG +
Preference number: 5 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRISSLV*ALRMGS
Trigger: CGAGCCCATCCTCAGTGCCAAGACCAAGGAGGAGAT...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTTCAGCGGCCGAGCACTaGCTGGGATCCACTTCGCAG +
Preference number: 5 (lower is better)
Translates to: EGRLGLLTPALGLQPWVPSAAEH*LGSTSQ
Trigger: CTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTGA...AGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATCGAAGCCGGCTGTATaGGAGAGGGTCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAASKPAV*ERVSGL
Trigger: CAACCCCGAGACCCTCTCCAATACAGCCGGCTTCGA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCACGCCAGGGTTCCGCTaGAGGGTCTTGGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: GEARPPDTRAGAATVGASTPGFR*RVLGTA
Trigger: TGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCGT...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGACGCCAGGGTTCCGCTaGAGGGTCTTGGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLTPGFR*RVLGTA
Trigger: TGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCGT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGAGTCCACAGCCGCTaGCATCTCTGCGTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRGVHSR*HLCVVL
Trigger: AAGGACCACGCAGAGATGCAAGCGGCTGTGGACTCC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGGGAGTCCACAGCCGCTaGCATCTCTGCGTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLGVHSR*HLCVVL
Trigger: AAGGACCACGCAGAGATGCAAGCGGCTGTGGACTCC...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp GTGCCAGCTCACCGGGCCGCCGAGCCAGCTCCTCCGCGGCAGTGCTaGAACTTCCCAGCTTGGCAGCAGCCGCCAACTCCTCGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: VPAHRAAEPAPPRQC*NFPAWQQPPTPRCC
Trigger: GCAACAGCGAGGAGTTGGCGGCTGCTGCCAAGCTGGGAAGTTTCAGCACTGCCGCGGAGGAGCTGGCTCGGCGGCCCGGTGAGCTGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp AGGGCTCCATGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCCCTGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: RAPCWGSSRKGCQAG*AESPAFLEATPWQA
Trigger: GGCCTGCCAGGGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS CCA 90 bp AGCAGGGACTCGTGGGAGCGAGACTCCTTCAGCCTCGGCATCAGATaGGACCTCTCATTGTCCGCGGCGGCGGCGGCGGCGCTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: SRDSWERDSFSLGIR*DLSLSAAAAAALRN
Trigger: GTTCCGGAGCGCCGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGACACAGGTACTTCTTCTaGGCTGGCAGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRHRYFF*AGRSLA
Trigger: GGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTG...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCACAGGTACTTCTTCTaGGCTGGCAGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLHRYFF*AGRSLA
Trigger: GGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTG...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTCGCAGAGGCGGCAAGTaGTGGAACTCGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPRRGGK*WNSKCS
Trigger: CGAGCACTTCGAGTTCCACAACTTGCCGCCTCTGCG...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGATGGTGATGGTTaGGTAGCGCGCCTTGATGCG +
Preference number: 5 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPQDGDG*VARLDA
Trigger: CGCATCAAGGCGCGCTACCAAACCATCACCATCCTG...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGATCTCCTCCTTGGTCTaGGCACTGAGGATGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LDSGREGRLGLLTPALGLISSLV*ALRMGS
Trigger: CGAGCCCATCCTCAGTGCCAAGACCAAGGAGGAGAT...CAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCGCCTCCTGGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCTACTCCTGCAGCAGGTaGAAGAGTGAGGGCGACATG +
Preference number: 5 (lower is better)
Translates to: RPPPGQRQGGEARPPDTRYSCSR*KSEGDM
Trigger: CATGTCGCCCTCACTCTTCAACCTGCTGCAGGAGTA...GCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCCAGGAGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GEARPPDTRAGAATVGASGRGPS*DTMLCS
Trigger: GGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCC...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GCAGCCGCCAACTCCTCGCTGTTGCTGTGTGAGCTCAGGGAGCTGTaGCCCTCAGAGCCTGAGTCGCCAAGGCCACGGGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: AAANSSLLLCELREL*PSEPESPRPRGDSG
Trigger: GCCGCTGTCACCCCGTGGCCTTGGCGACTCAGGCTCTGAGGGCCACAGCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGGCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GGCTGTCCCCCTTGGAGGAAGAGGACTGCTGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTGAGGCCGACGCCAGGGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: GCPPWRKRTAASGGY*GPPNQVRPTPGFRL
Trigger: CAAGCGGAACCCTGGCGTCGGCCTCACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGAGATGGGACCTCTCATaGTCCGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRRWDLS*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCT...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CAA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCGGCAGGAAAAGCACTaGCTTCCTGATGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: GEARPPDTRAGAATVGASRQEKH*LPDDVV
Trigger: GACGACGTCATCAGGAAGCAAGTGCTTTTCCTGCCG...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTTGGCTGGCAGGTCCTaGGCCTCGATCACCCACAGC +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRLAGRS*ASITHS
Trigger: GCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGAAAACATTGTCCGTCTaGAGCTTGCCCGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEKTLSV*SLPVVR
Trigger: CCGCACCACGGGCAAGCTCAAGACGGACAATGTTTT...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATCGCCCCAGAAAACATaGTCCGTCTTGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRSPQKT*SVLSLP
Trigger: GGGCAAGCTCAAGACGGACAATGTTTTCTGGGGCGA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCATCGCCCCAGAAAACATaGTCCGTCTTGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAASPQKT*SVLSLP
Trigger: GGGCAAGCTCAAGACGGACAATGTTTTCTGGGGCGA...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGATGCCATCTCCTCCTaGGTCTTGGCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRDAISS*VLALRM
Trigger: CATCCTCAGTGCCAAGACCAAGGAGGAGATGGCATC...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGATGCCATCTCCTCCTaGGTCTTGGCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: GREGRLGLLTPALGLQPWDAISS*VLALRM
Trigger: CATCCTCAGTGCCAAGACCAAGGAGGAGATGGCATC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGTACTCCTCAATGGCCTaGGTGGCCAGTGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVYSSMA*VASVFS
Trigger: GGAGAACACACTGGCCACCAAGGCCATTGAGGAGTA...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCTACTCCTCAATGGCCTaGGTGGCCAGTGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: DTRAGAATVGASPGRDPAYSSMA*VASVFS
Trigger: GGAGAACACACTGGCCACCAAGGCCATTGAGGAGTA...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGATTCTGGCCCACTAGCTaGAGGTACTCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: RPPDTRAGAATVGASPGRFWPTS*RYSSMA
Trigger: GGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAA...TCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGACAGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAAGGAAGCGCTGCATGTaGGTCCACTCATGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GQRQGGEARPPDTRAGAARKRCM*VHSCSR
Trigger: CCTAGAGCATGAGTGGACCAACATGCAGCGCTTCCT...TGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCAGGAAGCGCTGCATGTaGGTCCACTCATGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: DTRAGAATVGASPGRDPARKRCM*VHSCSR
Trigger: CCTAGAGCATGAGTGGACCAACATGCAGCGCTTCCT...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRVEIRS*SCSTAR
Trigger: CCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCAC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGTCTCCTCCTGGCACTaGAACAGGGTCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVVSSWH*NRVSYS
Trigger: GGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGAC...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPSYPGP*LRICRG
Trigger: GCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCTCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLTPALGLQPWVPPQAETSYPGP*LRICRG
Trigger: GCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGA...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCAGAGCCCGGCCTTTCTaGAGGCGACTCCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PHRERLVTSPHAASVSGGRARPF*RRLPGR
Trigger: CCTGCCAGGGAGTCGCCTCAAGAAAGGCCGGGCTCT...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408936.7
CDS TCA 90 bp ACTGTTCTGCCGTGGCACCGTGGGCTGCCCGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAGCTCACCGGGCCGCCGAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TVLPWHRGLPAFFSQ*HLSPCQLTGPPSQL
Trigger: GAGCTGGCTCGGCGGCCCGGTGAGCTGGCACGGCGACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp TGGAGGCCAGGTCATTGGTCCCTGGGAGCTGCCCGCTACCTGGGGTaGTCAGTGCTGTGTGGACGTCCCTCAGGATCCGAGGCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: WRPGHWSLGAARYLG*SVLCGRPSGSEAGV
Trigger: GACCCCTGCCTCGGATCCTGAGGGACGTCCACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp AGGGCTCCATGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCTCCGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: RAPCWGSSRKGCQAG*AESPAFLEATLRSR
Trigger: TCTGCTGCGGAGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489314.1
CDS CCA 90 bp TCTTCTGCAGCCCAGCTGAGATGCTGCTGCTGCCAGAGCCCGGTGTaGAGGCCAGGTCATTGGTCCCTGGGAGCTGCCCGCTACCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSAAQLRCCCCQSPV*RPGHWSLGAARYLG
Trigger: CCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp CCTGCTTGTGCACTGCCCGTGGCTTCAGTTCTGGGCTGTCCCCCTTaGAGGAAGAGGACTGCTGCCTCAGGCGGGTACTGGGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: PACALPVASVLGCPP*RKRTAASGGYWGPP
Trigger: GGGTGGGCCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp AGGTCCAGCGCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCGTGAC +
Preference number: 5 (lower is better)
Translates to: RSSASTALLGLSRDS*ERDSFSLGIRWDRD
Trigger: GTCACGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGCGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436835.5
CDS CCA 90 bp AGGTCCAGCGCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCATCCC +
Preference number: 5 (lower is better)
Translates to: RSSASTALLGLSRDS*ERDSFSLGIRWDHP
Trigger: GGGATGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGCGCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648693.1
CDS-3UTR CAA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCGGCAGGAAAAGCACTaGCTTCCTGATGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: LLTPALGLQPWVPPQAETRQEKH*LPDDVV
Trigger: GACGACGTCATCAGGAAGCAAGTGCTTTTCCTGCCG...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTCCACACGCCGGCTGTaGTCCTTGTTGGGATGCACC +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRSTRRL*SLLGCT
Trigger: GGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCTCAGCGAACTCTTaGTACATCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SGREGRLGLLTPALGLQPCSANS*YISMGR
Trigger: CCTGCCCATGGAGATGTACAAAGAGTTCGCTGAGCA...CGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGTGCTCAGCGAACTCTTaGTACATCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVCSANS*YISMGR
Trigger: CCTGCCCATGGAGATGTACAAAGAGTTCGCTGAGCA...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGACTCATACAGCGCTTaGATGAACTCACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: GREGRLGLLTPALGLQPWDSYSA*MNSPRA
Trigger: CGCCCTAGGTGAGTTCATCAAAGCGCTGTATGAGTC...CCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTACTCCTGCAGCAGGTaGAAGAGTGAGGGCGACATG +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPYSCSR*KSEGDM
Trigger: CATGTCGCCCTCACTCTTCAACCTGCTGCAGGAGTA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCCCAGCGTGCAGTCTCTTCTGCCCGCACCCCACAGGGAGCGGCTGGTGACCTCACGCCAGGGTTCCGCTaGAGGGTCTTGGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: PQRAVSSARTPQGAAGDLTPGFR*RVLGTA
Trigger: TGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCGT...GAGGTCACCAGCCGCTCCCTGTGGGGTGCGGGCAGAAGAGACTGCACGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGTACTCCTCCAGCTTCTaGGTGGAGATTCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEYSSSF*VEIRSL
Trigger: CAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTA...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGTCTCCTCCTGGCACTaGAACAGGGTCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPVSSWH*NRVSYS
Trigger: GGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGAC...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTCACCAGGCTTTCAGTTaGAGCCTCAGAACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPHQAFS*SLRTLW
Trigger: CCACAGGGTTCTGAGGCTCAAACTGAAAGCCTGGTG...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CAA 90 bp GACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGCCGATGCCGTTACGGGCTaGCATGCTGTACCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DTRAGAATVGASPGRDPADAVTG*HAVPLF
Trigger: AAAGAGAGGTACAGCATGCAAGCCCGTAACGGCATC...GGCAGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCAGTAATCTGCAATTaGGTGGGGTTGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSVICN*VGLVGE
Trigger: CTCCCCCACCAACCCCACCAAATTGCAGATTACTGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGCATCAGATGGGACCTTaGTGGTGGGAGCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRHQMGP*WWERRP
Trigger: AGGCCTGCGCTCCCACCACAAAGGTCCCATCTGATG...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS GCA 90 bp AGGGCTCCATGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCGTAGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: RAPCWGSSRKGCQAG*AESPAFLEATRRSR
Trigger: ACGACTCCTACGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000436835.5
CDS GCA 90 bp CGTGGCTTCAGTTCTGGGCTGTCCCCCTTGGAGGAAGAGGACTGCTaGCTCAGGCGGGTACTGGGGCCCACCCAATCAGGTGAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: RGFSSGLSPLEEEDC*LRRVLGPTQSGEAD
Trigger: GTCGGCCTCACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp AGGTCCAGCGCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: RSSASTALLGLSRDS*ERDSFSLGIRWDLS
Trigger: TGAGAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGCGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
CDS CCA 90 bp CTGAGATGCTGCTGCTGCCAGAGCCCGGTGTGGAGGCCAGGTCATTaGTCCCTGGGAGCTGCCCGCTACCTGGGGTGCTCAGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LRCCCCQSPVWRPGH*SLGAARYLGCSVLC
Trigger: ACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp AGGTCCAGCGCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCTGTCA +
Preference number: 5 (lower is better)
Translates to: RSSASTALLGLSRDS*ERDSFSLGIRWDLS
Trigger: TGACAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGCGCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS CCA 90 bp CCTGGTTCTGGGCACTTGCAACCCCCGAGGCTCTGGAGCCAGATCTaGCTTCCGAAGATGGCCAGGTCTCCAGTGAGCAGCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PGSGHLQPPRLWSQI*LPKMARSPVSSPSG
Trigger: GCCGGAGGGGCTGCTCACTGGAGACCTGGCCATCTTCGGAAGCCAGATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTAC +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGALPPLG*GVTTGY
Trigger: GTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGATCTCCTCCTTGGTCTaGGCACTGAGGATGGGCTCG +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRISSLV*ALRMGS
Trigger: CGAGCCCATCCTCAGTGCCAAGACCAAGGAGGAGAT...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTCAGGTCCTTTTCTGCTaGGCTGAGCTCGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPQVLFC*AELVLT
Trigger: AGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTG...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTACTCCTCCAGCTTCTaGGTGGAGATTCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPYSSSF*VEIRSL
Trigger: CAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCTCAATGATCTTCTGTTaGGAGTCCACAGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: GEARPPDTRAGAATVGASSMIFC*ESTAAC
Trigger: GCAAGCGGCTGTGGACTCCAAACAGAAGATCATTGA...GGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCTCAATGATCTTCTGTTaGGAGTCCACAGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: GRLGLLTPALGLQPWVPPSMIFC*ESTAAC
Trigger: GCAAGCGGCTGTGGACTCCAAACAGAAGATCATTGA...GGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTGATGCCGTTACGGGCTaGCATGCTGTACCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPDAVTG*HAVPLF
Trigger: AAAGAGAGGTACAGCATGCAAGCCCGTAACGGCATC...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCCTTCAGTAATCTGCAATTaGGTGGGGTTGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PDTRAGAATVGASPGRDPSVICN*VGLVGE
Trigger: CTCCCCCACCAACCCCACCAAATTGCAGATTACTGA...AGGGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp GGATACTATGCTCTGCTCCAGCTGGCTGACGGCCTCCCAGAGCAGTaGGTGCAGGCTGGAGAGCTCGCGGCCCAGGTCGATGTAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GYYALLQLADGLPEQ*VQAGELAAQVDVAL
Trigger: GAGGGCTACATCGACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGCATAGTATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp GGCTCTGGAGCCAGATCTGGCTTCCGAAGATGGCCAGGTCTCCAGTaGGCAGCCCCTCCGGCCCGGCCCAGGATCTTGCCGAAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GSGARSGFRRWPGLQ*AAPPARPRILPKLS
Trigger: TGACAACTTCGGCAAGATCCTGGGCCGGGCCGGAGGGGCTGCTCACTGGAGACCTGGCCATCTTCGGAAGCCAGATCTGGCTCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS TCA 90 bp CGGCATCAGATGGGACCTTTGTGGTGGGAGCGCAGGCCTCTCTGCTaGCCTGGTTCTGGGCACTTGCAACCCCCGAGGCTCTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RHQMGPLWWERRPLC*PGSGHLQPPRLWSQ
Trigger: CTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACAAAGGTCCCATCTGATGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS GCA 90 bp ATCCAGGTCACACACGGGACAGCCAAGGCCATGGCTAGGGTGACCTaGCCTGGACTCCGCTGCTACAGAGGAGCTTGGCCAGGGCATGGG +
Preference number: 5 (lower is better)
Translates to: IQVTHGTAKAMARVT*PGLRCYRGAWPGHG
Trigger: CCCATGCCCTGGCCAAGCTCCTCTGTAGCAGCGGAGTCCAGGGCAGGTCACCCTAGCCATGGCCTTGGCTGTCCCGTGTGTGACCTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 90 bp AGCCTGCCTCCCCATCCAGCGTGCGGGCGTCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGTTGGCCATCTGAAGATCAGGCTCGT +
Preference number: 5 (lower is better)
Translates to: SLPPHPACGRPGGPP*RGSCHRWPSEDQAR
Trigger: ACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GGTCGATCCTCCTCTGGGGGCCAGCACTGTTCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAGTCAGTGACATCTGTCGCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: GRSSSGGQHCSAVAP*AARLFQSVTSVAVP
Trigger: TGGCACGGCGACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp ATGGCTAGGGTGACCTGCCCTGGACTCCGCTGCTACAGAGGAGCTTaGCCAGGGCATGGGAGGGCAGAGGGGAATGGGAGTTCCACTGGC +
Preference number: 5 (lower is better)
Translates to: MARVTCPGLRCYRGA*PGHGRAEGNGSSTG
Trigger: GCCAGTGGAACTCCCATTCCCCTCTGCCCTCCCATGCCCTGGCCAAGCTCCTCTGTAGCAGCGGAGTCCAGGGCAGGTCACCCTAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 90 bp GGGACCTTTGTGGTGGGAGCGCAGGCCTCTCTGCTGACCTGGTTCTaGGCACTTGCAACCCCCGAGGCTCTGGAGCCAGATCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GTFVVGAQASLLTWF*ALATPEALEPDLAS
Trigger: GGAAGCCAGATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACAAAGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CCA 90 bp AGGTCCAGCGCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCTTTGT +
Preference number: 5 (lower is better)
Translates to: RSSASTALLGLSRDS*ERDSFSLGIRWDLC
Trigger: ACAAAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGCGCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGGCGGAAGCTGTGGTaGCGGTCCAGCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAWRKLW*RSSLGW
Trigger: CCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTCGCCCCAGAAAACATaGTCCGTCTTGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRSPQKT*SVLSLP
Trigger: GGGCAAGCTCAAGACGGACAATGTTTTCTGGGGCGA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTAC +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLPPLG*GVTTGY
Trigger: GTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCCAGGATGGTGATGGTTaGGTAGCGCGCCTTGATGCG +
Preference number: 5 (lower is better)
Translates to: PHRERLVTSPHAASVSGGQDGDG*VARLDA
Trigger: CGCATCAAGGCGCGCTACCAAACCATCACCATCCTG...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTACTCCTGCAGCAGGTaGAAGAGTGAGGGCGACATG +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRYSCSR*KSEGDM
Trigger: CATGTCGCCCTCACTCTTCAACCTGCTGCAGGAGTA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGACCTCCTTGCTGCCAAATTaGGCAAAGTTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LLTPALGLQPWVPPQAETSLLPN*AKLARF
Trigger: GAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGGA...GGTCTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRCLVW*VSGLPA
Trigger: GGCGGGCAGGCCAGACACCAACCACACCAGGCACCT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCAGGGAGGGGAGGCTCGGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGCGAGCAAGCGGGCTTTaGTTTCTAATGCATACTGTG +
Preference number: 5 (lower is better)
Translates to: RQGGEARPPDTRAGAATVRASGL*FLMHTV
Trigger: CACAGTATGCATTAGAAACAAAAGCCCGCTTGCTCG...CACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCCGAGCCTCCCCTCCCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp ATGACATCCAGGTCACACACGGGACAGCCAAGGCCATGGCTAGGGTaGCCTGCCCTGGACTCCGCTGCTACAGAGGAGCTTGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: MTSRSHTGQPRPWLG*PALDSAATEELGQG
Trigger: GCCCTGGCCAAGCTCCTCTGTAGCAGCGGAGTCCAGGGCAGGTCACCCTAGCCATGGCCTTGGCTGTCCCGTGTGTGACCTGGATGTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS GCA 90 bp ATCCTCCTCTGGGGGCCAGCACTGTTCTGCCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGTGACATCTGTCGCCGTGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ILLWGPALFCRGTVG*PPFSVSDICRRASS
Trigger: TGAGCTGGCACGGCGACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCCCCAGAGGAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp TGTGGTGGGAGCGCAGGCCTCTCTGCTGACCTGGTTCTGGGCACTTaGAACCCCCGAGGCTCTGGAGCCAGATCTGGCTTCCGAAGATGG +
Preference number: 5 (lower is better)
Translates to: CGGSAGLSADLVLGT*NPRGSGARSGFRRW
Trigger: CCATCTTCGGAAGCCAGATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CCA 90 bp AGAGCTCGCGGCCCAGGTCGATGTAGCCCTCGAAGCCGGCTGTATTaGAGAGGGTCTCGGGGTTGGAGATCTCCAGCAGGAAGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: RARGPGRCSPRSRLY*RGSRGWRSPAGSAA
Trigger: TGCAGCGCTTCCTGCTGGAGATCTCCAACCCCGAGACCCTCTCCAATACAGCCGGCTTCGAGGGCTACATCGACCTGGGCCGCGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGAGATGGGACCTCTCATaGTCCGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGERWDLS*SAAAAA
Trigger: CGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGCCGGCTGTTGTCCTaGTTGGGATGCACCGCTCGC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRRLLS*LGCTAR
Trigger: GCGAGCGGTGCATCCCAACAAGGACAACAGCCGGCG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVGPLPP*GLGVTT
Trigger: GGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTATGGGTCCAGGGCCCTaGCCGCCCTTGGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGMGPGP*PPLGLG
Trigger: GCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCAT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAAGATGAGGTGCTCGTaGTCCCCGCAGCGGTCCACC +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAKMRCS*SPQRST
Trigger: GGTGGACCGCTGCGGGGACAACGAGCACCTCATCTT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGGACTCATACAGCGCTTaGATGAACTCACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRDSYSA*MNSPRA
Trigger: CGCCCTAGGTGAGTTCATCAAAGCGCTGTATGAGTC...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCAGCGGCCGAGCACTaGCTGGGATCCACTTCGCAG +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASAAEH*LGSTSQ
Trigger: CTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGCCTCCTGACACCCGCGCTGGGGCTGCAACCGTGGGTGCCTCCCCAGGCCGAGGACATGTATTCCTCCTaGCTGCCAAATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GLLTPALGLQPWVPPQAEDMYSS*LPNLAK
Trigger: CTTTGCCAAATTTGGCAGCAAGGAGGAATACATGTC...CTCGGCCTGGGGAGGCACCCACGGTTGCAGCCCCAGCGCGGGTGTCAGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASPGSLG*PGPATR
Trigger: CCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRCLVW*VSGLPA
Trigger: GGCGGGCAGGCCAGACACCAACCACACCAGGCACCT...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GCTGCAGGCAGGGCCCAGCTCCCGGGAACTCAGGTTCTCTGTGGCCTGGGCAGGTACTCCTCCAGCTTCTaGGTGGAGATTCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AAGRAQLPGTQVLCGLGRYSSSF*VEIRSL
Trigger: CAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTA...CCTGCCCAGGCCACAGAGAACCTGAGTTCCCGGGAGCTGGGCCCTGCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGCTCATGAGGCGGGCATaGGCGGCATCCAACGAGGCA +
Preference number: 5 (lower is better)
Translates to: PDLWLLGALEHQPGPVWELMRRA*AASNEA
Trigger: TGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAG...CTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp CATCCAGCGTGCGGGCGTCCTGGAGGTCCACCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAAGATCAGGCTCGTTGGCTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: HPACGRPGGPPWRGS*HRWPSEDQARWLPS
Trigger: ACTCGGAAGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp CCAGGCACAGCTCGCACAGGTACTTCTTCTTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCTTCAGGATGTGCTCCACACGCCGGC +
Preference number: 5 (lower is better)
Translates to: PGTARTGTSSWLAGP*PRSPTASGCAPHAG
Trigger: GCCGGCGTGTGGAGCACATCCTGAAGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTGCGAGCTGTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CCA 90 bp TGGAGAGGCTCTTGCCACCGTTGGCCATCTGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGCTGCGGGCAGGTGAGGGCTGGACCC +
Preference number: 5 (lower is better)
Translates to: WRGSCHRWPSEDQAR*LPSNSSCGQVRAGP
Trigger: GGGTCCAGCCCTCACCTGCCCGCAGCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp TCAGATGGGACCTTTGTGGTGGGAGCGCAGGCCTCTCTGCTGACCTaGTTCTGGGCACTTGCAACCCCCGAGGCTCTGGAGCCAGATCTG +
Preference number: 5 (lower is better)
Translates to: SDGTFVVGAQASLLT*FWALATPEALEPDL
Trigger: CAGATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACAAAGGTCCCATCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTGGCTCTTGGTGCGCTaGATGGAGCCCTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRWLLVR*MEPLRR
Trigger: CCGCCTCAAGGGCTCCATCAAGCGCACCAAGAGCCA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGGCGGAAGCTGTGGTaGCGGTCCAGCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPWRKLW*RSSLGW
Trigger: CCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCGGCTGTTGTCCTTGTaGGGATGCACCGCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRLLSL*GCTARR
Trigger: CCGGCGAGCGGTGCATCCCAACAAGGACAACAGCCG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGTTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTAC +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGELPPLG*GVTTGY
Trigger: GTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAA...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGCAGGATGGTGATGGTTaGGTAGCGCGCCTTGATGCG +
Preference number: 5 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRQDGDG*VARLDA
Trigger: CGCATCAAGGCGCGCTACCAAACCATCACCATCCTG...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAAAGATGAGGTGCTCGTaGTCCCCGCAGCGGTCCACC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQKMRCS*SPQRST
Trigger: GGTGGACCGCTGCGGGGACAACGAGCACCTCATCTT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGVEARS*VPGSCP
Trigger: CGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCAC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGG +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKPGSLG*PGPATR
Trigger: CCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTCATGAGGCGGGCATaGGCGGCATCCAACGAGGCA +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLMRRA*AASNEA
Trigger: TGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp TGCGGGCGTCCTGGAGGTCCACCATGGAGAGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCTCGTTGGCTTCCGAGTAACTCGAGC +
Preference number: 5 (lower is better)
Translates to: CGRPGGPPWRGSCHR*PSEDQARWLPSNSS
Trigger: GCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp GCAAACTATCGCTTCCAGCCATGGCAAGTCGCCCTCTGGGGCCTCTaGGCAGGGTGCAGGCCAGAGCACAGAGGTCTGGGTCAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: ANYRFQPWQVALWGL*AGCRPEHRGLGQER
Trigger: TCTTTCTTGACCCAGACCTCTGTGCTCTGGCCTGCACCCTGCCCAGAGGCCCCAGAGGGCGACTTGCCATGGCTGGAAGCGATAGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCTGCTGTGCACGGGCTaGATGACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRLLCTG*MTTSSS
Trigger: GGAGGAAGAGGTGGTCATCAAGCCCGTGCACAGCAG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACTGCTGTGCACGGGCTaGATGACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQLLCTG*MTTSSS
Trigger: GGAGGAAGAGGTGGTCATCAAGCCCGTGCACAGCAG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCGCCGGCTGTTGTCCTaGTTGGGATGCACCGCTCGC +
Preference number: 5 (lower is better)
Translates to: KADTVLRAIWPDPPRSLARRLLS*LGCTAR
Trigger: GCGAGCGGTGCATCCCAACAAGGACAACAGCCGGCG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKGPLPP*GLGVTT
Trigger: GGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCC...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRCLVW*VSGLPA
Trigger: GGCGGGCAGGCCAGACACCAACCACACCAGGCACCT...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGGTGAAGGGCCCTGCTaGTGCACTGCCCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGGEGPC*CTARGF
Trigger: GAAGCCACGGGCAGTGCACAAGCAGGGCCCTTCACC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGGAGTCCACAGCCGCTaGCATCTCTGCGTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQGVHSR*HLCVVL
Trigger: AAGGACCACGCAGAGATGCAAGCGGCTGTGGACTCC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGASYPGP*LRICRG
Trigger: GCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACAGCCGAGACCCTGCCCTaGGCCACCATAGTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTAETLP*ATIVPL
Trigger: GAGGGGGACTATGGTGGCCAAGGGCAGGGTCTCGGC...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp GTTCCACTGGCCTTCTCCTGTCTAGACCAAAGCAGCACCCTCCACTaGACAAGCCACTCCGCCTGGCATGGCCTCACTCCTGTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VPLAFSCLDQSSTLH*TSHSAWHGLTPVPP
Trigger: AGGAGGGACAGGAGTGAGGCCATGCCAGGCGGAGTGGCTTGTTCAGTGGAGGGTGCTGCTTTGGTCTAGACAGGAGAAGGCCAGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 90 bp AACCCAGTTCAGCGGAGTTCAAGACTAACTGCACCAGCCTTGGCTTaGCCTTTCCATCGTCCAGGGGTGGCCCACAGCAGCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: NPVQRSSRLTAPALA*PFHRPGVAHSSWAA
Trigger: TGCTGCCCAGCTGCTGTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCGCCGGCTGTTGTCCTaGTTGGGATGCACCGCTCGC +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRRLLS*LGCTAR
Trigger: GCGAGCGGTGCATCCCAACAAGGACAACAGCCGGCG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAAAACATTGTCCGTCTaGAGCTTGCCCGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGAKTLSV*SLPVVR
Trigger: CCGCACCACGGGCAAGCTCAAGACGGACAATGTTTT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGATGGGTCCAGGGCCCTaGCCGCCCTTGGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELMGPGP*PPLGLG
Trigger: GCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCAT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAATGGGTCCAGGGCCCTaGCCGCCCTTGGGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTMGPGP*PPLGLG
Trigger: GCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCAT...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAGAGGGACTCATACAGCGCTTaGATGAACTCACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: HPPFRWGLCGTFQLQGQRDSYSA*MNSPRA
Trigger: CGCCCTAGGTGAGTTCATCAAAGCGCTGTATGAGTC...CCTCTGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCAAGGAAGCGCTGCATGTaGGTCCACTCATGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGARKRCM*VHSCSR
Trigger: CCTAGAGCATGAGTGGACCAACATGCAGCGCTTCCT...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQGRGPS*DTMLCS
Trigger: GGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSVEARS*VPGSCP
Trigger: CGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCAC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGVEIRS*SCSTAR
Trigger: CCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCAC...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTGGGCCTGTGTGGGAGGTGTGGTACTCCTCCAGCTTCTaGGTGGAGATTCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LWLLGALEHQPGPVWEVWYSSSF*VEIRSL
Trigger: CAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTA...CCACACCTCCCACACAGGCCCAGGCTGATGCTCTAGGGCTCCCAGAAGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp CGGAAAGATCGTTCTCAATCACCATCTTCTGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCGGTGTGGAGGCCAGGTCATTGGTCC +
Preference number: 5 (lower is better)
Translates to: RKDRSQSPSSAAQLR*CCCQSPVWRPGHWS
Trigger: GGACCAATGACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACGATCTTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 90 bp GGCCGAGTCAGATGTGAACCCAGTTCAGCGGAGTTCAAGACTAACTaGACCAGCCTTGGCTTGGCCTTTCCATCGTCCAGGGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRVRCEPSSAEFKTN*TSLGLAFPSSRGGP
Trigger: TGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGGGTTCACATCTGACTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 90 bp AGCCGTGCCTGGTACTCCAGCACCAGCTTCTGCGTCGTCTCCTCCTaGCACTTGAACAGGGTCTCATACTCCTCCAGCTTCTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRAWYSSTSFCVVSS*HLNRVSYSSSFLVE
Trigger: CTCCACCAAGAAGCTGGAGGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGACGACGCAGAAGCTGGTGCTGGAGTACCAGGCACGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp AGAAGACGAGAAACACTCCTGAAAGCAAACTATCGCTTCCAGCCATaGCAAGTCGCCCTCTGGGGCCTCTGGGCAGGGTGCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RRRETLLKANYRFQP*QVALWGLWAGCRPE
Trigger: CTCTGGCCTGCACCCTGCCCAGAGGCCCCAGAGGGCGACTTGCCATGGCTGGAAGCGATAGTTTGCTTTCAGGAGTGTTTCTCGTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTGGCGGAAGCTGTGGTaGCGGTCCAGCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSWRKLW*RSSLGW
Trigger: CCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACGGCAGGAAAAGCACTaGCTTCCTGATGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQRQEKH*LPDDVV
Trigger: GACGACGTCATCAGGAAGCAAGTGCTTTTCCTGCCG...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCGGCTGTTGTCCTTGTaGGGATGCACCGCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASRLLSL*GCTARR
Trigger: CCGGCGAGCGGTGCATCCCAACAAGGACAACAGCCG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCAAAACATTGTCCGTCTaGAGCTTGCCCGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: IWPDPPRSLASGSPRASAKTLSV*SLPVVR
Trigger: CCGCACCACGGGCAAGCTCAAGACGGACAATGTTTT...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCGCCCCAGAAAACATaGTCCGTCTTGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSPQKT*SVLSLP
Trigger: GGGCAAGCTCAAGACGGACAATGTTTTCTGGGGCGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCGCAGAGGCGGCAAGTaGTGGAACTCGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGRRGGK*WNSKCS
Trigger: CGAGCACTTCGAGTTCCACAACTTGCCGCCTCTGCG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCACATCCACCCTTCAGGTGGGGCCTCTGTGGCACATTCCAGCTGCAGGGGCATGCTCAGCGAACTCTTaGTACATCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: STSTLQVGPLWHIPAAGACSANS*YISMGR
Trigger: CCTGCCCATGGAGATGTACAAAGAGTTCGCTGAGCA...TGCCCCTGCAGCTGGAATGTGCCACAGAGGCCCCACCTGAAGGGTGGATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAGATGCCATCTCCTCCTaGGTCTTGGCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQDAISS*VLALRM
Trigger: CATCCTCAGTGCCAAGACCAAGGAGGAGATGGCATC...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTTCTGGCCCACTAGCTaGAGGTACTCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRFWPTS*RYSSMA
Trigger: GGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTTCGAAGCCGGCTGTATaGGAGAGGGTCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: KADTVLRAIWPDPPRSLASKPAV*ERVSGL
Trigger: CAACCCCGAGACCCTCTCCAATACAGCCGGCTTCGA...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPGRGPS*DTMLCS
Trigger: GGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCGTCTCCTCCTGGCACTaGAACAGGGTCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: IWPDPPRSLASGSPRASAVSSWH*NRVSYS
Trigger: GGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGAC...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCCCACAGGGAGCGGCTGGTGACCTCGCCTCACGCTGCTTCAGTCTCTGGTGGCGCAAATGTACAGAAATaGCACAGCCACACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PHRERLVTSPHAASVSGGANVQK*HSHTES
Trigger: AGACTCTGTGTGGCTGTGCAATTTCTGTACATTTGC...GCCACCAGAGACTGAAGCAGCGTGAGGCGAGGTCACCAGCCGCTCCCTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp CAGACCGGAAAGATCGTTCTCAATCACCATCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGAGCCCGGTGTGGAGGCCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: QTGKIVLNHHLLQPS*DAAAARARCGGQVI
Trigger: AATGACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACGATCTTTCCGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp CTGTTGCGCTCCTTCTTCTTCTTCTTGTCGGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGAGGCGGCAAGTTGTGGAACTCGAAG +
Preference number: 5 (lower is better)
Translates to: LLRSFFFFLSVSRYR*TVTVRRGGKLWNSK
Trigger: CTTCGAGTTCCACAACTTGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACCGGGAGACCGACAAGAAGAAGAAGAAGGAGCGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CCA 90 bp TCTGTCCTCCATGGCATGGAATCCTTACTGCTCCCAGGAAGGAGGTaGCACCATGACATCCAGGTCACACACGGGACAGCCAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: SVLHGMESLLLPGRR*HHDIQVTHGTAKAM
Trigger: CATGGCCTTGGCTGTCCCGTGTGTGACCTGGATGTCATGGTGCCACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATGGAGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 90 bp CTCGTGGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCTTaGGCCATGCGTCACATGAACCACCACACAAGTCACCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: LVGARLLQPRHQMGP*AMRHMNHHTSHLTE
Trigger: TTCTGTGAGGTGACTTGTGTGGTGGTTCATGTGACGCATGGCCCAAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATGGTTGCGGTCCAGCTaGGGCTGGCTCTTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLWLRSS*GWLLVR
Trigger: GCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCGCCGGCTGTTGTCCTaGTTGGGATGCACCGCTCGC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELRRLLS*LGCTAR
Trigger: GCGAGCGGTGCATCCCAACAAGGACAACAGCCGGCG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTCACAGGTACTTCTTCTaGGCTGGCAGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGHRYFF*AGRSLA
Trigger: GGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTG...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCACAGGTACTTCTTCTaGGCTGGCAGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEHRYFF*AGRSLA
Trigger: GGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGATCTCCTCCTTGGTCTaGGCACTGAGGATGGGCTCG +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEISSLV*ALRMGS
Trigger: CGAGCCCATCCTCAGTGCCAAGACCAAGGAGGAGAT...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGATGCCATCTCCTCCTaGGTCTTGGCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPDAISS*VLALRM
Trigger: CATCCTCAGTGCCAAGACCAAGGAGGAGATGGCATC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTACTCCTCAATGGCCTaGGTGGCCAGTGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGYSSMA*VASVFS
Trigger: GGAGAACACACTGGCCACCAAGGCCATTGAGGAGTA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTTCTGGCCCACTAGCTaGAGGTACTCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGFWPTS*RYSSMA
Trigger: GGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGGTGAAGGGCCCTGCTaGTGCACTGCCCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELGEGPC*CTARGF
Trigger: GAAGCCACGGGCAGTGCACAAGCAGGGCCCTTCACC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGCAGGTCCTTTTCTGCTaGGCTGAGCTCGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRQVLFC*AELVLT
Trigger: AGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTG...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSVEIRS*SCSTAR
Trigger: CCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCAC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTACTCCTCCAGCTTCTaGGTGGAGATTCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRYSSSF*VEIRSL
Trigger: CAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCGTCTCCTCCTGGCACTaGAACAGGGTCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPVSSWH*NRVSYS
Trigger: GGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGAC...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGGCCAGATCCGCCCAGATCTCTGGCTTCTGGGAGCCCTAGAGCATCAGCCTCAGTAATCTGCAATTaGGTGGGGTTGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: IWPDPPRSLASGSPRASASVICN*VGLVGE
Trigger: CTCCCCCACCAACCCCACCAAATTGCAGATTACTGA...GGCTGATGCTCTAGGGCTCCCAGAAGCCAGAGATCTGGGCGGATCTGGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp AGGCCTGCCAGGGAGGGCAAGAGATGTGCCCCAGCATCCCATCTTTaGTCTAGTGTTGCTGCGACACCCAAACCTCTTGGGTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: RPAREGKRCAPASHL*SSVAATPKPLGSIS
Trigger: GGAAATGGACCCAAGAGGTTTGGGTGTCGCAGCAACACTAGATCAAAGATGGGATGCTGGGGCACATCTCTTGCCCTCCCTGGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS TCA 90 bp TCCTTCAGCCTCGGCATCAGATGGGACCTTGGGCCATGCGTCACATaGACCACCACACAAGTCACCTCACAGAATCTCCACGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SFSLGIRWDLGPCVT*TTTQVTSQNLHEPK
Trigger: CTTGGGCTCGTGGAGATTCTGTGAGGTGACTTGTGTGGTGGTTCATGTGACGCATGGCCCAAGGTCCCATCTGATGCCGAGGCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTGGCTCTTGGTGCGCTaGATGGAGCCCTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELWLLVR*MEPLRR
Trigger: CCGCCTCAAGGGCTCCATCAAGCGCACCAAGAGCCA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000408936.7
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCCTGCTGTGCACGGGCTaGATGACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASLLCTG*MTTSSS
Trigger: GGAGGAAGAGGTGGTCATCAAGCCCGTGCACAGCAG...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGTTGGCTGGCAGGTCCTaGGCCTCGATCACCCACAGC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELLAGRS*ASITHS
Trigger: GCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAA...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGCTCAGCGAACTCTTaGTACATCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPCSANS*YISMGR
Trigger: CCTGCCCATGGAGATGTACAAAGAGTTCGCTGAGCA...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTCGAAGCCGGCTGTATaGGAGAGGGTCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSSKPAV*ERVSGL
Trigger: CAACCCCGAGACCCTCTCCAATACAGCCGGCTTCGA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAATCAATGATCTTCTGTTaGGAGTCCACAGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQSMIFC*ESTAAC
Trigger: GCAAGCGGCTGTGGACTCCAAACAGAAGATCATTGA...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGTCAATGATCTTCTGTTaGGAGTCCACAGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRSMIFC*ESTAAC
Trigger: GCAAGCGGCTGTGGACTCCAAACAGAAGATCATTGA...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACTCATGAGGCGGGCATaGGCGGCATCCAACGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTLMRRA*AASNEA
Trigger: TGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCTCGTAGGAGTCGTCTaGGTCCAGAAGGGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELLVGVV*VQKGVG
Trigger: CCCGACTCCCTTCTGGACCAAGACGACTCCTACGAG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAAGAGCCCGGCCTTTCTaGAGGCGACTCGTAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLRARPF*RRLVGV
Trigger: GACTCCTACGAGTCGCCTCAAGAAAGGCCGGGCTCT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259371.6
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCGGCAGGAAAAGCACTaGCTTCCTGATGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRQEKH*LPDDVV
Trigger: GACGACGTCATCAGGAAGCAAGTGCTTTTCCTGCCG...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATCCACACGCCGGCTGTaGTCCTTGTTGGGATGCACC +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTSTRRL*SLLGCT
Trigger: GGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGCGCAGAGGCGGCAAGTaGTGGAACTCGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELRRGGK*WNSKCS
Trigger: CGAGCACTTCGAGTTCCACAACTTGCCGCCTCTGCG...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCACATGACATACTCCTCAATGGCCTaGGTGGCCAGTGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLSSCLPTDLPSARSHMTYSSMA*VASVFS
Trigger: GGAGAACACACTGGCCACCAAGGCCATTGAGGAGTA...TGTCATGTGGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTTCTGGCCCACTAGCTaGAGGTACTCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVFWPTS*RYSSMA
Trigger: GGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCTCCTTGCTGCCAAATTaGGCAAAGTTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGSLLPN*AKLARF
Trigger: GAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGGA...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTAGGAAGCGCTGCATGTaGGTCCACTCATGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVRKRCM*VHSCSR
Trigger: CCTAGAGCATGAGTGGACCAACATGCAGCGCTTCCT...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACATCGAAGCCGGCTGTATaGGAGAGGGTCTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTSKPAV*ERVSGL
Trigger: CAACCCCGAGACCCTCTCCAATACAGCCGGCTTCGA...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAACGCCAGGGTTCCGCTaGAGGGTCTTGGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTTPGFR*RVLGTA
Trigger: TGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCGT...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCAGGTCCTTTTCTGCTaGGCTGAGCTCGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEQVLFC*AELVLT
Trigger: AGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGGAGTCCACAGCCGCTaGCATCTCTGCGTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTGVHSR*HLCVVL
Trigger: AAGGACCACGCAGAGATGCAAGCGGCTGTGGACTCC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAAAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: EQQSRPALGSTRTKGYVQNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...TTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCTGTGTCCTCCTATCTTCCTGCCTGCCAACTGATCTGCCAAGTGCCAGGTCCCTCACTGACAGGAGGTTaGGCAGTTTCCATCACCCAG +
Preference number: 5 (lower is better)
Translates to: SVSSYLPACQLICQVPGPSLTGG*AVSITQ
Trigger: CTGGGTGATGGAAACTGCCAAACCTCCTGTCAGTGA...GGGACCTGGCACTTGGCAGATCAGTTGGCAGGCAGGAAGATAGGAGGACACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGCCCGGCCCAGGATCTaGCCGAAGTTGTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASARPRI*PKLSLR
Trigger: TCTTAGTGACAACTTCGGCAAGATCCTGGGCCGGGC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS TCA 90 bp ACCACATGGCACAACCTCCAGGTCCAAGAAGACGAGAAACACTCCTaGAAGCAAACTATCGCTTCCAGCCATGGCAAGTCGCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TTWHNLQVQEDEKHS*KQTIASSHGKSPSG
Trigger: CCCAGAGGGCGACTTGCCATGGCTGGAAGCGATAGTTTGCTTTCAGGAGTGTTTCTCGTCTTCTTGGACCTGGAGGTTGTGCCATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS GCA 90 bp GTGAAATCTATCAGACCGGAAAGATCGTTCTCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTGCTGCTGCCAGAGCCCGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VKSIRPERSFSITIF*SPAEMLLLPEPGVE
Trigger: CTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACGATCTTTCCGGTCTGATAGATTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 90 bp CACCCAAACCTCTTGGGTCCATTTCCTCATCTGTCCTCCATGGCATaGAATCCTTACTGCTCCCAGGAAGGAGGTGGCACCATGACATCC +
Preference number: 5 (lower is better)
Translates to: HPNLLGPFPHLSSMA*NPYCSQEGGGTMTS
Trigger: GGATGTCATGGTGCCACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATGGAGGACAGATGAGGAAATGGACCCAAGAGGTTTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCAAAACATTGTCCGTCTaGAGCTTGCCCGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASKTLSV*SLPVVR
Trigger: CCGCACCACGGGCAAGCTCAAGACGGACAATGTTTT...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCAGGATGGTGATGGTTaGGTAGCGCGCCTTGATGCG +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKQDGDG*VARLDA
Trigger: CGCATCAAGGCGCGCTACCAAACCATCACCATCCTG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACACAGGATGGTGATGGTTaGGTAGCGCGCCTTGATGCG +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTQDGDG*VARLDA
Trigger: CGCATCAAGGCGCGCTACCAAACCATCACCATCCTG...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGATCTCCTCCTTGGTCTaGGCACTGAGGATGGGCTCG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELISSLV*ALRMGS
Trigger: CGAGCCCATCCTCAGTGCCAAGACCAAGGAGGAGAT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTTCTGGCCCACTAGCTaGAGGTACTCCTCAATGGCC +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSFWPTS*RYSSMA
Trigger: GGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGACTCATACAGCGCTTaGATGAACTCACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVDSYSA*MNSPRA
Trigger: CGCCCTAGGTGAGTTCATCAAAGCGCTGTATGAGTC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAAATAAAACCCTTGGGAGAGCAGCAGTCCCGGCCAGCCCTCGGCAGCACCAGGGACATGTATTCCTCCTaGCTGCCAAATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KIKPLGEQQSRPALGSTRDMYSS*LPNLAK
Trigger: CTTTGCCAAATTTGGCAGCAAGGAGGAATACATGTC...CCTGGTGCTGCCGAGGGCTGGCCGGGACTGCTGCTCTCCCAAGGGTTTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELGRGPS*DTMLCS
Trigger: GGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTGRGPS*DTMLCS
Trigger: GGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCC...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCCGAGCAAGCGGGCTTTaGTTTCTAATGCATACTCTC +
Preference number: 5 (lower is better)
Translates to: SSRAAISHAVRTLNLKGPRASGL*FLMHTL
Trigger: GAGAGTATGCATTAGAAACAAAAGCCCGCTTGCTCG...GGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000373782.7
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTTCACTGACAGGAGGTTaGGCAGTTTCCATCACCCAG +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVSLTGG*AVSITQ
Trigger: CTGGGTGATGGAAACTGCCAAACCTCCTGTCAGTGA...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp TTTGTTTCTAATGCATACTCTCTTTCAGCTGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCATCCAACGAGGCAATGCGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FVSNAYSLSAGSGHS*GGHWRHPTRQCASP
Trigger: AGGAGAAGCGCATTGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCCAGCTGAAAGAGAGTATGCATTAGAAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000373782.7
CDS CCA 90 bp CAGGTGCCCCACCACCAGGCTTTCAGTTTGAGCCTCAGAACCCTGTaGGGTCGGGTCTATCTTTTCCTTCATCTTCCAGATGAGAAGACT +
Preference number: 5 (lower is better)
Translates to: QVPHHQAFSLSLRTL*GRVYLFLHLPDEKT
Trigger: AGTCTTCTCATCTGGAAGATGAAGGAAAAGATAGACCCGACCCCACAGGGTTCTGAGGCTCAAACTGAAAGCCTGGTGGTGGGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGGCAGGAAAAGCACTaGCTTCCTGATGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKRQEKH*LPDDVV
Trigger: GACGACGTCATCAGGAAGCAAGTGCTTTTCCTGCCG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGCTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAAAAACATTGTCCGTCTaGAGCTTGCCCGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: SSCSSVLKVGEGQISYRTKTLSV*SLPVVR
Trigger: CCGCACCACGGGCAAGCTCAAGACGGACAATGTTTT...TGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGATGCCATCTCCTCCTaGGTCTTGGCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELDAISS*VLALRM
Trigger: CATCCTCAGTGCCAAGACCAAGGAGGAGATGGCATC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCGACTCATACAGCGCTTaGATGAACTCACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASDSYSA*MNSPRA
Trigger: CGCCCTAGGTGAGTTCATCAAAGCGCTGTATGAGTC...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATACTCCTGCAGCAGGTaGAAGAGTGAGGGCGACATG +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLYSCSR*KSEGDM
Trigger: CATGTCGCCCTCACTCTTCAACCTGCTGCAGGAGTA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTACTCCTGCAGCAGGTaGAAGAGTGAGGGCGACATG +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKYSCSR*KSEGDM
Trigger: CATGTCGCCCTCACTCTTCAACCTGCTGCAGGAGTA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGACATGTATTCCTCCTaGCTGCCAAATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGDMYSS*LPNLAK
Trigger: CTTTGCCAAATTTGGCAGCAAGGAGGAATACATGTC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGAGGAAGCGCTGCATGTaGGTCCACTCATGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELRKRCM*VHSCSR
Trigger: CCTAGAGCATGAGTGGACCAACATGCAGCGCTTCCT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGGTCTCCTCCTGGCACTaGAACAGGGTCTCATACTCC +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELVSSWH*NRVSYS
Trigger: GGAGTATGAGACCCTGTTCAAGTGCCAGGAGGAGAC...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGCGAGCAAGCGGGCTTTaGTTTCTAATGCATACTCTC +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGERASGL*FLMHTL
Trigger: GAGAGTATGCATTAGAAACAAAAGCCCGCTTGCTCG...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000373782.7
CDS-3UTR CAA 90 bp TCCCGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SRPALGSTRTKGYVQPLGNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...ACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCTCACTGACAGGAGGTTaGGCAGTTTCCATCACCCAG +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSSLTGG*AVSITQ
Trigger: CTGGGTGATGGAAACTGCCAAACCTCCTGTCAGTGA...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CCACCCCCACTTTCTGGGCAGTCGGAAAGAGTCCTCACTGACAGGAGGTTTGGCGCAAATGTACAGAAATaGCACAGCCACACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PPPLSGQSERVLTDRRFGANVQK*HSHTES
Trigger: AGACTCTGTGTGGCTGTGCAATTTCTGTACATTTGC...GCCAAACCTCCTGTCAGTGAGGACTCTTTCCGACTGCCCAGAAAGTGGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTCCTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCGATGCCGTTACGGGCTaGCATGCTGTACCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LLLICLESGGGADKLQNSDAVTG*HAVPLF
Trigger: AAAGAGAGGTACAGCATGCAAGCCCGTAACGGCATC...GCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AAGGCAGATACAGTGCTCAGAGCCATCTGGCCAGATCCGCCCAGATCTCTGGCTCGAGCAAGCGGGCTTTaGTTTCTAATGCATACTGTG +
Preference number: 5 (lower is better)
Translates to: KADTVLRAIWPDPPRSLARASGL*FLMHTV
Trigger: CACAGTATGCATTAGAAACAAAAGCCCGCTTGCTCG...AGCCAGAGATCTGGGCGGATCTGGCCAGATGGCTCTGAGCACTGTATCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGTGCTCAGCGAACTCTTaGTACATCTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKCSANS*YISMGR
Trigger: CCTGCCCATGGAGATGTACAAAGAGTTCGCTGAGCA...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAAAGATGAGGTGCTCGTaGTCCCCGCAGCGGTCCACC +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKKMRCS*SPQRST
Trigger: GGTGGACCGCTGCGGGGACAACGAGCACCTCATCTT...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCTCCTTGCTGCCAAATTaGGCAAAGTTGGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ISHAVRTLNLKGPCVPASSLLPN*AKLARF
Trigger: GAACCTGGCCAACTTTGCCAAATTTGGCAGCAAGGA...GCTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CGGCCAGCCCTCGGCAGCACCAGGACCAAAGGATATGTACAACCATTAGGTGAGGACATGTATTCCTCCTaGCTGCCAAATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RPALGSTRTKGYVQPLGEDMYSS*LPNLAK
Trigger: CTTTGCCAAATTTGGCAGCAAGGAGGAATACATGTC...CTCACCTAATGGTTGTACATATCCTTTGGTCCTGGTGCTGCCGAGGGCTGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTACAGGTCCTTTTCTGCTaGGCTGAGCTCGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLQVLFC*AELVLT
Trigger: AGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTG...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGCAGGTCCTTTTCTGCTaGGCTGAGCTCGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKQVLFC*AELVLT
Trigger: AGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTG...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp TCTCGTGACAATCCTGTCAGGACTAAAAAGGTGCACCCAGAAAGTTaGGGTGACCTGCCCAAGATCACATGCATAGCAAGTGGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: SRDNPVRTKKVHPES*GDLPKITCIASGRV
Trigger: GACTCGGCCACTTGCTATGCATGTGATCTTGGGCAGGTCACCTCAACTTTCTGGGTGCACCTTTTTAGTCCTGACAGGATTGTCACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATCCACACGCCGGCTGTaGTCCTTGTTGGGATGCACC +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSTRRL*SLLGCT
Trigger: GGTGCATCCCAACAAGGACAACAGCCGGCGTGTGGA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACGCAGAGGCGGCAAGTaGTGGAACTCGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKRRGGK*WNSKCS
Trigger: CGAGCACTTCGAGTTCCACAACTTGCCGCCTCTGCG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTATCAATGATCTTCTGTTaGGAGTCCACAGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLSMIFC*ESTAAC
Trigger: GCAAGCGGCTGTGGACTCCAAACAGAAGATCATTGA...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp AGGGCCGCTATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTGCAAATGTACAGAAATaGCACAGCCACACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RAAISHAVRTLNLKGPCVANVQK*HSHTES
Trigger: AGACTCTGTGTGGCTGTGCAATTTCTGTACATTTGC...AACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAACACAGGTACTTCTTCTaGGCTGGCAGGTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKHRYFF*AGRSLA
Trigger: GGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTG...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRCLVW*VSGLPA
Trigger: GGCGGGCAGGCCAGACACCAACCACACCAGGCACCT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATCTTACCCAGGGCCTTaGCTCAGAATCTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSYPGP*LRICRG
Trigger: GCCCCTGCAGATTCTGAGCAAAGGCCCTGGGTAAGA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp ATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGAGCTGAATAAAATAAAACCCTaGGGAGAGCAGCAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: ICLESGGGADKLQNSLELNKIKP*GEQQSR
Trigger: CCGGGACTGCTGCTCTCCCAAGGGTTTTATTTTATT...CAGCTCTAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp TATTTCCCATGCAGTGCGCACGCTCAACTTAAAAGGCCCCTGTGTTCCAGCAAGAGGATCTTGCCGAAGTaGTCACTAAGAAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: YFPCSAHAQLKRPLCSSKRILPK*SLRSPR
Trigger: CCTTGGACTTCTTAGTGACAACTTCGGCAAGATCCT...CTTGCTGGAACACAGGGGCCTTTTAAGTTGAGCGTGCGCACTGCATGGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAATCGCCCCAGAAAACATaGTCCGTCTTGAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKSPQKT*SVLSLP
Trigger: GGGCAAGCTCAAGACGGACAATGTTTTCTGGGGCGA...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAGGTGAAGGGCCCTGCTaGTGCACTGCCCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRGEGPC*CTARGF
Trigger: GAAGCCACGGGCAGTGCACAAGCAGGGCCCTTCACC...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGCTCATCTGTCTTGAAAGTGGGGGAGGGGCAGATAAGCTACAGAACAGCCTAGCAAATGTACAGAAATaGCACAGCCACACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LLICLESGGGADKLQNSLANVQK*HSHTES
Trigger: AGACTCTGTGTGGCTGTGCAATTTCTGTACATTTGC...TAGGCTGTTCTGTAGCTTATCTGCCCCTCCCCCACTTTCAAGACAGATGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATCAGCGGCCGAGCACTaGCTGGGATCCACTTCGCAG +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRSAAEH*LGSTSQ
Trigger: CTGCGAAGTGGATCCCAGCAAGTGCTCGGCCGCTGA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 90 bp CAGAACCCTGTGGGGTCGGGTCTATCTTTTCCTTCATCTTCCAGATaGGAAGACTGGAAATCATGGCTTCTGACACAACACGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: QNPVGSGLSFPSSSR*EDWKSWLLTQHERR
Trigger: TCTTCTTTCGTGTTGTGTCAGAAGCCATGATTTCCAGTCTTCTCATCTGGAAGATGAAGGAAAAGATAGACCCGACCCCACAGGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGACGCAGAGGCGGCAAGTaGTGGAACTCGAAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRRRGGK*WNSKCS
Trigger: CGAGCACTTCGAGTTCCACAACTTGCCGCCTCTGCG...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGAACGCCAGGGTTCCGCTaGAGGGTCTTGGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRTPGFR*RVLGTA
Trigger: TGCAGTACCCAAGACCCTCAAGCGGAACCCTGGCGT...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp GGTGAGATAGTTACATTACAGTCAAACACCAAGAACATTTACAAAATCGGCAGATACTCCTCAATGGCCTaGGTGGCCAGTGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GEIVTLQSNTKNIYKIGRYSSMA*VASVFS
Trigger: GGAGAACACACTGGCCACCAAGGCCATTGAGGAGTA...TCTGCCGATTTTGTAAATGTTCTTGGTGTTTGACTGTAATGTAACTATCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS-3UTR CAA 90 bp CTGACAGGAGGTTTGGCAGTTTCCATCACCCAGAACATGGAAGTTAAGCAAAAAGACATGTATTCCTCCTaGCTGCCAAATTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LTGGLAVSITQNMEVKQKDMYSS*LPNLAK
Trigger: CTTTGCCAAATTTGGCAGCAAGGAGGAATACATGTC...TTTTTGCTTAACTTCCATGTTCTGGGTGATGGAAACTGCCAAACCTCCTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp GGCACCGCCAGCTCCCATCTCGGACGGCCTCGGCAGTaGCTCGGCCAGCGGGCCTGCCACCCTCCGCGGCAC +
Preference number: 6 (lower is better)
Translates to: GTASSHLGRPRQ*LGQRACHPPRH
Trigger: GTGCCGCGGAGGGTGGCAGGCCCGCTGGCCGAGGCACTGCCGAGGCCGTCCGAGATGGGAGCTGGCGGTGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489314.1
CDS CCA 72 bp TGCCCGCCGCACCGTGGCCAGCCCTGCCAGGTTCACTaGGGTTGCCCGGGCCGGCCACCCGGCCACCAGCTG +
Preference number: 6 (lower is better)
Translates to: CPPHRGQPCQVH*GCPGRPPGHQL
Trigger: CAGCTGGTGGCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CCGGCCTGGCGCGCCCTCGGAGGTGCCTGGTGTGGTTaGTGTCTGGCCTGCCCGCCGCACCGTGGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: PAWRALGGAWCG*CLACPPHRGQP
Trigger: GGGCTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 72 bp GCCGGCCTGGCGCGCCCTCGGAGGTGCCTGGTGTGGTaGGTGTCTGGCCTGCCCGCCGCACCGTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: AGLARPRRCLVW*VSGLPAAPWPA
Trigger: GGCTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp GGTTGCCCGGGCCGGCCACCCGGCCACCAGCTGAGCTaGAGCGGCCTGCCCATCTGTGGGGAGGACGTCGGG +
Preference number: 6 (lower is better)
Translates to: GCPGRPPGHQLS*SGLPICGEDVG
Trigger: CCCGACGTCCTCCCCACAGATGGGCAGGCCGCTGCAGCTCAGCTGGTGGCCGGGTGGCCGGCCCGGGCAACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp CCGCACCGTGGCCAGCCCTGCCAGGTTCACTGGGGTTaGCCGGGCCGGCCACCCGGCCACCAGCTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PHRGQPCQVHWG*PGRPPGHQLSC
Trigger: GCAGCTCAGCTGGTGGCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGGCTGGCCACGGTGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 72 bp GCCGCACCGTGGCCAGCCCTGCCAGGTTCACTGGGGTaGCCCGGGCCGGCCACCCGGCCACCAGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: AAPWPALPGSLG*PGPATRPPAEL
Trigger: CAGCTCAGCTGGTGGCCGGGTGGCCGGCCCGGGCAACCCCAGTGAACCTGGCAGGGCTGGCCACGGTGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp CCAACAGCTGGGGCCGGCCTGGCGCGCCCTCGGAGGTaGCTGGTGTGGTTGGTGTCTGGCCTGCCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: PTAGAGLARPRR*LVWLVSGLPAA
Trigger: TGCGGCGGGCAGGCCAGACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CTGGTGTGGTTGGTGTCTGGCCTGCCCGCCGCACCGTaGCCAGCCCTGCCAGGTTCACTGGGGTTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: LVWLVSGLPAAP*PALPGSLGLPG
Trigger: CCCGGGCAACCCCAGTGAACCTGGCAGGGCTGGCCACGGTGCGGCGGGCAGGCCAGACACCAACCACACCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CTGGAAGGAGAGCGGTGCCAACAGCTGGGGCCGGCCTaGCGCGCCCTCGGAGGTGCCTGGTGTGGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: LEGERCQQLGPA*RALGGAWCGWC
Trigger: ACACCAACCACACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 90 bp TGGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGGGACCTCTCATaGTCCGCGGCGGCGGCGGCGGCGCTCCGGAACCCCGGCAGGATG +
Preference number: 6 (lower is better)
Translates to: WERDSFSLGIRWDLS*SAAAAAALRNPGRM
Trigger: CATCCTGCCGGGGTTCCGGAGCGCCGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
CDS TCA 72 bp CCGTGGCACCGTGGGCTGCCCGCCTTTTTCAGTCAGTaGCATCTGTCGCCGTGCCAGCTCACCGGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PWHRGLPAFFSQ*HLSPCQLTGPP
Trigger: CGGCGGCCCGGTGAGCTGGCACGGCGACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp GCCTCAGCAGCCGGTAGTAGTAGGAGGACCTCCCGGTaGTCTTCCTGGCGCTGCCGCCCGCGGACATGCTGC +
Preference number: 6 (lower is better)
Translates to: ASAAGSSRRTSR*SSWRCRPRTCC
Trigger: GCAGCATGTCCGCGGGCGGCAGCGCCAGGAAGAGCACCGGGAGGTCCTCCTACTACTACCGGCTGCTGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS CCA 72 bp GCGCTCCGGAACCCCGGCAGGATGTGGCGGAAGCTGTaGTTGCGGTCCAGCTTGGGCTGGCTCTTGGTGCGC +
Preference number: 6 (lower is better)
Translates to: ALRNPGRMWRKL*LRSSLGWLLVR
Trigger: GCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTTCCGGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CCA 72 bp TCGTGGGAGCGAGACTCCTTCAGCCTCGGCATCAGATaGGACCTCTCATTGTCCGCGGCGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SWERDSFSLGIR*DLSLSAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCGGACAATGAGAGGTCCCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259371.6
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
CDS CCA 72 bp TACACAGGGTTCTGGAAGGAGAGCGGTGCCAACAGCTaGGGCCGGCCTGGCGCGCCCTCGGAGGTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: YTGFWKESGANS*GRPGAPSEVPG
Trigger: ACCAGGCACCTCCGAGGGCGCGCCAGGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAGAACCCTGTGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 90 bp CGGAAGCTGTGGTTGCGGTCCAGCTTGGGCTGGCTCTTGGTGCGCTaGATGGAGCCCTTGAGGCGGCGGCTGAGGAAGCCCGTGACCCGG +
Preference number: 6 (lower is better)
Translates to: RKLWLRSSLGWLLVR*MEPLRRRLRKPVTR
Trigger: CCGGGTCACGGGCTTCCTCAGCCGCCGCCTCAAGGGCTCCATCAAGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCACAGCTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CAA 90 bp GCCTTGATGCGGATCATGGGTCCAGGGCCCTTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTACCACTTCTCCACGAACTGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: ALMRIMGPGPLPPLG*GVTTGYHFSTNCRP
Trigger: CGGGCGGCAGTTCGTGGAGAAGTGGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCATGATCCGCATCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS TCA 72 bp GCTCTGCTCCAGCTGGCTGACGGCCTCCCAGAGCAGTaGGTGCAGGCTGGAGAGCTCGCGGCCCAGGTCGAT +
Preference number: 6 (lower is better)
Translates to: ALLQLADGLPEQ*VQAGELAAQVD
Trigger: ATCGACCTGGGCCGCGAGCTCTCCAGCCTGCACTCACTGCTCTGGGAGGCCGTCAGCCAGCTGGAGCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 72 bp GCCAGATCTGGCTTCCGAAGATGGCCAGGTCTCCAGTaGGCAGCCCCTCCGGCCCGGCCCAGGATCTTGCCG +
Preference number: 6 (lower is better)
Translates to: ARSGFRRWPGLQ*AAPPARPRILP
Trigger: CGGCAAGATCCTGGGCCGGGCCGGAGGGGCTGCTCACTGGAGACCTGGCCATCTTCGGAAGCCAGATCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS GCA 72 bp CCGAGGGCTCCATGCTGGGGCTCTTCTCGGAAAGGCTaGCAGGCAGGCTGCGCCGAGAGCCCGGCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: PRAPCWGSSRKG*QAGCAESPAFL
Trigger: AAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCATGGAGCCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000465078.1
ENST00000489314.1
CDS GCA 72 bp TGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCCC +
Preference number: 6 (lower is better)
Translates to: CWGSSRKGCQAG*AESPAFLEATP
Trigger: GGGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408936.7
ENST00000465078.1
CDS CCA 72 bp AGCGGCAGGCCAGCCGCCATCTGGTACACAGGGTTCTaGAAGGAGAGCGGTGCCAACAGCTGGGGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SGRPAAIWYTGF*KESGANSWGRP
Trigger: AGGCCGGCCCCAGCTGTTGGCACCGCTCTCCTTCCAGAACCCTGTGTACCAGATGGCGGCTGGCCTGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CCTTGGAGGAAGAGGACTGCTGCCTCAGGCGGGTACTaGGGCCCACCCAATCAGGTGAGGCCGACGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PWRKRTAASGGY*GPPNQVRPTPG
Trigger: CCCTGGCGTCGGCCTCACCTGATTGGGTGGGCCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTCCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp ATCCCTCAGCATAGCCACCAGGCTCGGGAAGCCGAGTaGCCGGGCGAGCCTTCCTGCTGTCCGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: IPQHSHQAREAE*PGEPSCCPLLL
Trigger: CAGGAGCAGCGGACAGCAGGAAGGCTCGCCCGGCCACTCGGCTTCCCGAGCCTGGTGGCTATGCTGAGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648693.1
CDS CAA 90 bp GCTGAGATGCTGCTGCTGCCAGAGCCCGGTGTGGAGGCCAGGTCATaGGTCCCTGGGAGCTGCCCGCTACCTGGGGTGCTCAGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: AEMLLLPEPGVEARS*VPGSCPLPGVLSAV
Trigger: CACAGCACTGAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 90 bp CCCTGCTTGTGCACTGCCCGTGGCTTCAGTTCTGGGCTGTCCCCCTaGGAGGAAGAGGACTGCTGCCTCAGGCGGGTACTGGGGCCCACC +
Preference number: 6 (lower is better)
Translates to: PCLCTARGFSSGLSP*EEEDCCLRRVLGPT
Trigger: GGTGGGCCCCAGTACCCGCCTGAGGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp TGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCGT +
Preference number: 6 (lower is better)
Translates to: CWGSSRKGCQAG*AESPAFLEATR
Trigger: ACGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000436835.5
CDS GCA 72 bp GGCTGGTCGATCCTCCTCTGGGGGCCAGCACTGTTCTaGCGTGGCACCGTGGGCTGCCCGCCTTTTTCAGTC +
Preference number: 6 (lower is better)
Translates to: GWSILLWGPALF*RGTVGCPPFSV
Trigger: GACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCCCCAGAGGAGGATCGACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp TGCTGGGGCTCTTCTCGGAAAGGCTGCCAGGCAGGCTaGGCCGAGAGCCCGGCCTTTCTTGAGGCGACTCTC +
Preference number: 6 (lower is better)
Translates to: CWGSSRKGCQAG*AESPAFLEATL
Trigger: GAGAGTCGCCTCAAGAAAGGCCGGGCTCTCGGCGCAGCCTGCCTGGCAGCCTTTCCGAGAAGAGCCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489314.1
CDS CCA 72 bp GCCTCCACCGCACTGCTGGGGCTGAGCAGGGACTCGTaGGAGCGAGACTCCTTCAGCCTCGGCATCAGATGG +
Preference number: 6 (lower is better)
Translates to: ASTALLGLSRDS*ERDSFSLGIRW
Trigger: CCATCTGATGCCGAGGCTGAAGGAGTCTCGCTCCCACGAGTCCCTGCTCAGCCCCAGCAGTGCGGTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
ENST00000648693.1
CDS CAA 72 bp TGGTTGCGGTCCAGCTTGGGCTGGCTCTTGGTGCGCTaGATGGAGCCCTTGAGGCGGCGGCTGAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: WLRSSLGWLLVR*MEPLRRRLRKP
Trigger: GGGCTTCCTCAGCCGCCGCCTCAAGGGCTCCATCAAGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CAA 72 bp CTCCGGAACCCCGGCAGGATGTGGCGGAAGCTGTGGTaGCGGTCCAGCTTGGGCTGGCTCTTGGTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: LRNPGRMWRKLW*RSSLGWLLVRL
Trigger: CAAGCGCACCAAGAGCCAGCCCAAGCTGGACCGCAACCACAGCTTCCGCCACATCCTGCCGGGGTTCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000408936.7
CDS CAA 72 bp CGGATCATGGGTCCAGGGCCCTTGCCGCCCTTGGGGTaGGGCGTCACCACCGGGTACCACTTCTCCACGAAC +
Preference number: 6 (lower is better)
Translates to: RIMGPGPLPPLG*GVTTGYHFSTN
Trigger: GTTCGTGGAGAAGTGGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCATGATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CAA 90 bp TGCGCGTTCATGGTCAAGAGCCAAGCGGCTGTGCGGTCCAGGGCATaGGGGCTCACAGGTGAAGGGCCCTGCTTGTGCACTGCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: CAFMVKSQAAVRSRA*GLTGEGPCLCTARG
Trigger: GCCACGGGCAGTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAATGCCCTGGACCGCACAGCCGCTTGGCTCTTGACCATGAACGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp GGTCATTGGTCCCTGGGAGCTGCCCGCTACCTGGGGTaGTCAGTGCTGTGTGGACGTCCCTCAGGATCCGAG +
Preference number: 6 (lower is better)
Translates to: GHWSLGAARYLG*SVLCGRPSGSE
Trigger: CTCGGATCCTGAGGGACGTCCACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp GGCCAGGTCATTGGTCCCTGGGAGCTGCCCGCTACCTaGGGTGCTCAGTGCTGTGTGGACGTCCCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: GQVIGPWELPAT*GAQCCVDVPQD
Trigger: ATCCTGAGGGACGTCCACACAGCACTGAGCACCCCAGGTAGCGGGCAGCTCCCAGGGACCAATGACCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp GTGGTGGGAGCGCAGGCCTCTCTGCTGACCTGGTTCTaGGCACTTGCAACCCCCGAGGCTCTGGAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: VVGAQASLLTWF*ALATPEALEPD
Trigger: ATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CAA 72 bp TTGATGCGGATCATGGGTCCAGGGCCCTTGCCGCCCTaGGGGTTGGGCGTCACCACCGGGTACCACTTCTCC +
Preference number: 6 (lower is better)
Translates to: LMRIMGPGPLPP*GLGVTTGYHFS
Trigger: GGAGAAGTGGTACCCGGTGGTGACGCCCAACCCCAAGGGCGGCAAGGGCCCTGGACCCATGATCCGCATCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS TCA 72 bp ATGGGACCTTTGTGGTGGGAGCGCAGGCCTCTCTGCTaGCCTGGTTCTGGGCACTTGCAACCCCCGAGGCTC +
Preference number: 6 (lower is better)
Translates to: MGPLWWERRPLC*PGSGHLQPPRL
Trigger: GAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACAAAGGTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS GCA 72 bp AAGGCCAGCTCGCAGCACATCTTGAGGTTGCCCTGGTaGTCTGGGAGGTCAGCGGCCGAGCACTTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: KASSQHILRLPW*SGRSAAEHLLG
Trigger: TCCCAGCAAGTGCTCGGCCGCTGACCTCCCAGAGCACCAGGGCAACCTCAAGATGTGCTGCGAGCTGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000459906.1
ENST00000648444.1
CDS GCA 72 bp TGGGGGCCAGCACTGTTCTGCCGTGGCACCGTGGGCTaGCCGCCTTTTTCAGTCAGTGACATCTGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: WGPALFCRGTVG*PPFSVSDICRR
Trigger: ACGGCGACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CCCCATCCAGCGTGCGGGCGTCCTGGAGGTCCACCATaGAGAGGCTCTTGCCACCGTTGGCCATCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: PHPACGRPGGPP*RGSCHRWPSED
Trigger: ATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCACGCTGGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp AGGGCCCTGCTTGTGCACTGCCCGTGGCTTCAGTTCTaGGCTGTCCCCCTTGGAGGAAGAGGACTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RALLVHCPWLQF*AVPLGGRGLLP
Trigger: AGGCAGCAGTCCTCTTCCTCCAAGGGGGACAGCCCAGAACTGAAGCCACGGGCAGTGCACAAGCAGGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp GGGCACTTGCAACCCCCGAGGCTCTGGAGCCAGATCTaGCTTCCGAAGATGGCCAGGTCTCCAGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GHLQPPRLWSQI*LPKMARSPVSS
Trigger: GCTGCTCACTGGAGACCTGGCCATCTTCGGAAGCCAGATCTGGCTCCAGAGCCTCGGGGGTTGCAAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CCA 72 bp ACCTTTGTGGTGGGAGCGCAGGCCTCTCTGCTGACCTaGTTCTGGGCACTTGCAACCCCCGAGGCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: TFVVGAQASLLT*FWALATPEALE
Trigger: CTCCAGAGCCTCGGGGGTTGCAAGTGCCCAGAACCAGGTCAGCAGAGAGGCCTGCGCTCCCACCACAAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CAA 72 bp GCCCGGCCTTTCTTGAGGCGACTCGTAGGAGTCGTCTaGGTCCAGAAGGGAGTCGGGCTCCATGGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: ARPFLRRLVGVV*VQKGVGLHGVW
Trigger: CCACACGCCATGGAGCCCGACTCCCTTCTGGACCAAGACGACTCCTACGAGTCGCCTCAAGAAAGGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259371.6
ENST00000394340.7
ENST00000436835.5
CDS CAA 90 bp GTGCTGAAACTTCCCAGCTTGGCAGCAGCCGCCAACTCCTCGCTGTaGCTGTGTGAGCTCAGGGAGCTGTGGCCCTCAGAGCCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: VLKLPSLAAAANSSL*LCELRELWPSEPES
Trigger: CGACTCAGGCTCTGAGGGCCACAGCTCCCTGAGCTCACACAGCAACAGCGAGGAGTTGGCGGCTGCTGCCAAGCTGGGAAGTTTCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp TGCGGGCGTCCTGGAGGTCCACCATGGAGAGGCTCTTaGCACCGTTGGCCATCTGAAGATCAGGCTCGTTGG +
Preference number: 6 (lower is better)
Translates to: CGRPGGPPWRGS*HRWPSEDQARW
Trigger: CCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp TCCTCTGGGGGCCAGCACTGTTCTGCCGTGGCACCGTaGGCTGCCCGCCTTTTTCAGTCAGTGACATCTGTC +
Preference number: 6 (lower is better)
Translates to: SSGGQHCSAVAP*AARLFQSVTSV
Trigger: GACAGATGTCACTGACTGAAAAAGGCGGGCAGCCCACGGTGCCACGGCAGAACAGTGCTGGCCCCCAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 72 bp TGGACGTCCCTCAGGATCCGAGGCAGGGGTCCCAGTTaGGATACTATGCTCTGCTCCAGCTGGCTGACGGCC +
Preference number: 6 (lower is better)
Translates to: WTSLRIRGRGPS*DTMLCSSWLTA
Trigger: GGCCGTCAGCCAGCTGGAGCAGAGCATAGTATCCAAACTGGGACCCCTGCCTCGGATCCTGAGGGACGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 72 bp ATGGTCAAGAGCCAAGCGGCTGTGCGGTCCAGGGCATaGGGGCTCACAGGTGAAGGGCCCTGCTTGTGCACT +
Preference number: 6 (lower is better)
Translates to: MVKSQAAVRSRA*GLTGEGPCLCT
Trigger: AGTGCACAAGCAGGGCCCTTCACCTGTGAGCCCCAATGCCCTGGACCGCACAGCCGCTTGGCTCTTGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CAA 72 bp GCAGCCCCTCCGGCCCGGCCCAGGATCTTGCCGAAGTaGTCACTAAGAAGTCCAAGGCCACAGAGGCCCATT +
Preference number: 6 (lower is better)
Translates to: AAPPARPRILPK*SLRSPRPQRPI
Trigger: AATGGGCCTCTGTGGCCTTGGACTTCTTAGTGACAACTTCGGCAAGATCCTGGGCCGGGCCGGAGGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CAA 90 bp GAACCCAGTTCAGCGGAGTTCAAGACTAACTGCACCAGCCTTGGCTaGGCCTTTCCATCGTCCAGGGGTGGCCCACAGCAGCTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: EPSSAEFKTNCTSLG*AFPSSRGGPQQLGS
Trigger: GCTGCCCAGCTGCTGTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS GCA 72 bp CGTTCTCAATCACCATCTTCTGCAGCCCAGCTGAGATaGTGCTGCTGCCAGAGCCCGGTGTGGAGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RSQSPSSAAQLR*CCCQSPVWRPG
Trigger: ACCTGGCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CAGCGGAGTTCAAGACTAACTGCACCAGCCTTGGCTTaGCCTTTCCATCGTCCAGGGGTGGCCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: QRSSRLTAPALA*PFHRPGVAHSS
Trigger: GCTGCTGTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS TCA 72 bp TGCTGTACCTCTCTTTCAGCTGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCATCCAACGAGGCAATGC +
Preference number: 6 (lower is better)
Translates to: CCTSLSAGSGHS*GGHWRHPTRQC
Trigger: GCATTGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCCAGCTGAAAGAGAGGTACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309989.1
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp AGGTCTGTCAGGAAGTCCTTCACCTTGCCCGTGCTCTaGAGGATGTGCACCAGGGCAGATGCCATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSVRKSFTLPVL*RMCTRADAISS
Trigger: GGAGGAGATGGCATCTGCCCTGGTGCACATCCTGCAGAGCACGGGCAAGGTGAAGGACTTCCTGACAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000459906.1
ENST00000648444.1
CDS CCA 72 bp GTCCAGGCACAGCTCGCACAGGTACTTCTTCTTGGCTaGCAGGTCCTTGGCCTCGATCACCCACAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: VQAQLAQVLLLG*QVLGLDHPQLQ
Trigger: CTGAAGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTGCGAGCTGTGCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CCA 72 bp TCTTGCCACCGTTGGCCATCTGAAGATCAGGCTCGTTaGCTTCCGAGTAACTCGAGCTGCGGGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SCHRWPSEDQAR*LPSNSSCGQVR
Trigger: CCTCACCTGCCCGCAGCTCGAGTTACTCGGAAGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CCTGGAGGTCCACCATGGAGAGGCTCTTGCCACCGTTaGCCATCTGAAGATCAGGCTCGTTGGCTTCCGAGT +
Preference number: 6 (lower is better)
Translates to: PGGPPWRGSCHR*PSEDQARWLPS
Trigger: ACTCGGAAGCCAACGAGCCTGATCTTCAGATGGCCAACGGTGGCAAGAGCCTCTCCATGGTGGACCTCCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp GAAACACTCCTGAAAGCAAACTATCGCTTCCAGCCATaGCAAGTCGCCCTCTGGGGCCTCTGGGCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: ETLLKANYRFQP*QVALWGLWAGC
Trigger: GCACCCTGCCCAGAGGCCCCAGAGGGCGACTTGCCATGGCTGGAAGCGATAGTTTGCTTTCAGGAGTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CAA 72 bp TCAGCGGAGTTCAAGACTAACTGCACCAGCCTTGGCTaGGCCTTTCCATCGTCCAGGGGTGGCCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: SAEFKTNCTSLG*AFPSSRGGPQQ
Trigger: CTGCTGTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 72 bp CCAGTTCAGCGGAGTTCAAGACTAACTGCACCAGCCTaGGCTTGGCCTTTCCATCGTCCAGGGGTGGCCCAC +
Preference number: 6 (lower is better)
Translates to: PVQRSSRLTAPA*AWPFHRPGVAH
Trigger: GTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 90 bp GATGTGAACCCAGTTCAGCGGAGTTCAAGACTAACTGCACCAGCCTaGGCTTGGCCTTTCCATCGTCCAGGGGTGGCCCACAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: DVNPVQRSSRLTAPA*AWPFHRPGVAHSSW
Trigger: CCAGCTGCTGTGGGCCACCCCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGGGTTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS TCA 72 bp AAGATCGTTCTCAATCACCATCTTCTGCAGCCCAGCTaGGATGCTGCTGCTGCCAGAGCCCGGTGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: KIVLNHHLLQPS*DAAAARARCGG
Trigger: GCCTCCACACCGGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 72 bp TGTCCTGCAGCACCGCCAGGTCCTTTTCTGCTTGGCTaGGCTCGTCCTTACTCCTTAGCCTATCCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: CPAAPPGPFLLG*ARPYSLAYPCG
Trigger: CCCACAGGGATAGGCTAAGGAGTAAGGACGAGCTCAGCCAAGCAGAAAAGGACCTGGCGGTGCTGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp TCCTCCAGCTTCTTGGTGGAGATTCGCAGCTTGTCCTaGAGCACCGCCAGGTCCTTTTCTGCTTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SSSFLVEIRSLS*STARSFSAWLS
Trigger: GCTCAGCCAAGCAGAAAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp GCTCGCACAGGTACTTCTTCTTGGCTGGCAGGTCCTTaGCCTCGATCACCCACAGCTTCAGGATGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: ARTGTSSWLAGP*PRSPTASGCAP
Trigger: TGGAGCACATCCTGAAGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CCA 72 bp TCCTTCTTCTTCTTCTTGTCGGTCTCCCGGTACAGGTaGACAGTGACCGTGCGCAGAGGCGGCAAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: SFFFFLSVSRYR*TVTVRRGGKLW
Trigger: CCACAACTTGCCGCCTCTGCGCACGGTCACTGTCCACCTGTACCGGGAGACCGACAAGAAGAAGAAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CCA 72 bp CATGGCATGGAATCCTTACTGCTCCCAGGAAGGAGGTaGCACCATGACATCCAGGTCACACACGGGACAGCC +
Preference number: 6 (lower is better)
Translates to: HGMESLLLPGRR*HHDIQVTHGTA
Trigger: GGCTGTCCCGTGTGTGACCTGGATGTCATGGTGCCACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 72 bp AGCTCGCACAGGTACTTCTTCTTGGCTGGCAGGTCCTaGGCCTCGATCACCCACAGCTTCAGGATGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSHRYFFLAGRS*ASITHSFRMCS
Trigger: GGAGCACATCCTGAAGCTGTGGGTGATCGAGGCCAAGGACCTGCCAGCCAAGAAGAAGTACCTGTGCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000394340.7
ENST00000408936.7
ENST00000436835.5
ENST00000648444.1
CDS CAA 90 bp AACAGGGTCTCATACTCCTCCAGCTTCTTGGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGGTCCTTTTCTGCTTGGCTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: NRVSYSSSFLVEIRS*SCSTARSFSAWLSS
Trigger: CGAGCTCAGCCAAGCAGAAAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTATGAGACCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 72 bp AATGCATACTCTCTTTCAGCTGGGTCAGGGCACTCATaGGGCGGGCATTGGCGGCATCCAACGAGGCAATGC +
Preference number: 6 (lower is better)
Translates to: NAYSLSAGSGHS*GGHWRHPTRQC
Trigger: GCATTGCCTCGTTGGATGCCGCCAATGCCCGCCTCATGAGTGCCCTGACCCAGCTGAAAGAGAGTATGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000373782.7
CDS TCA 72 bp ACCTGTCACAGGTGCCCCACCACCAGGCTTTCAGTTTaGGCCTCAGAACCCTGTGGGGTCGGGTCTATCTTT +
Preference number: 6 (lower is better)
Translates to: TCHRCPTTRLSV*ASEPCGVGSIF
Trigger: AAAGATAGACCCGACCCCACAGGGTTCTGAGGCTCAAACTGAAAGCCTGGTGGTGGGGCACCTGTGACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS TCA 72 bp AGGGAGGGCAAGAGATGTGCCCCAGCATCCCATCTTTaGTCTAGTGTTGCTGCGACACCCAAACCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: REGKRCAPASHL*SSVAATPKPLG
Trigger: CCCAAGAGGTTTGGGTGTCGCAGCAACACTAGATCAAAGATGGGATGCTGGGGCACATCTCTTGCCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS TCA 72 bp CTCGGCATCAGATGGGACCTTGGGCCATGCGTCACATaGACCACCACACAAGTCACCTCACAGAATCTCCAC +
Preference number: 6 (lower is better)
Translates to: LGIRWDLGPCVT*TTTQVTSQNLH
Trigger: GTGGAGATTCTGTGAGGTGACTTGTGTGGTGGTTCATGTGACGCATGGCCCAAGGTCCCATCTGATGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS GCA 72 bp ATCAGACCGGAAAGATCGTTCTCAATCACCATCTTCTaGAGCCCAGCTGAGATGCTGCTGCTGCCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: IRPERSFSITIF*SPAEMLLLPEP
Trigger: GGGCTCTGGCAGCAGCAGCATCTCAGCTGGGCTGCAGAAGATGGTGATTGAGAACGATCTTTCCGGTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS CCA 72 bp CTCTTGGGTCCATTTCCTCATCTGTCCTCCATGGCATaGAATCCTTACTGCTCCCAGGAAGGAGGTGGCACC +
Preference number: 6 (lower is better)
Translates to: LLGPFPHLSSMA*NPYCSQEGGGT
Trigger: GGTGCCACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATGGAGGACAGATGAGGAAATGGACCCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 72 bp TCATACTCCTCCAGCTTCTTGGTGGAGATTCGCAGCTaGTCCTGCAGCACCGCCAGGTCCTTTTCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: SYSSSFLVEIRS*SCSTARSFSAW
Trigger: CCAAGCAGAAAAGGACCTGGCGGTGCTGCAGGACAAGCTGCGAATCTCCACCAAGAAGCTGGAGGAGTATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS GCA 72 bp AGATGTGAACCCAGTTCAGCGGAGTTCAAGACTAACTaGACCAGCCTTGGCTTGGCCTTTCCATCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RCEPSSAEFKTN*TSLGLAFPSSR
Trigger: CCTGGACGATGGAAAGGCCAAGCCAAGGCTGGTGCAGTTAGTCTTGAACTCCGCTGAACTGGGTTCACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS GCA 72 bp TTTCCTCATCTGTCCTCCATGGCATGGAATCCTTACTaGTCCCAGGAAGGAGGTGGCACCATGACATCCAGG +
Preference number: 6 (lower is better)
Translates to: FPHLSSMAWNPY*SQEGGGTMTSR
Trigger: CCTGGATGTCATGGTGCCACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATGGAGGACAGATGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CCA 72 bp TTGATGAACTCACCTAGGGCGTCCTGCAGGTACTTCTaGCCCACTAGCTTGAGGTACTCCTCAATGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LMNSPRASCRYF*PTSLRYSSMAL
Trigger: CAAGGCCATTGAGGAGTACCTCAAGCTAGTGGGCCAGAAGTACCTGCAGGACGCCCTAGGTGAGTTCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000459906.1
ENST00000648444.1
CDS CCA 72 bp CAAACCTCTTGGGTCCATTTCCTCATCTGTCCTCCATaGCATGGAATCCTTACTGCTCCCAGGAAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: QTSWVHFLICPP*HGILTAPRKEV
Trigger: CACCTCCTTCCTGGGAGCAGTAAGGATTCCATGCCATGGAGGACAGATGAGGAAATGGACCCAAGAGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 72 bp AGGCCCCTGTGTTCCAGCAAGCGAGCAAGCGGGCTTTaGTTTCTAATGCATACTCTCTTTCAGCTGGGTCAG +
Preference number: 6 (lower is better)
Translates to: RPLCSSKRASGL*FLMHTLFQLGQ
Trigger: CTGACCCAGCTGAAAGAGAGTATGCATTAGAAACAAAAGCCCGCTTGCTCGCTTGCTGGAACACAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259371.6
ENST00000373782.7
CDS TCA 72 bp CACAACCTCCAGGTCCAAGAAGACGAGAAACACTCCTaGAAGCAAACTATCGCTTCCAGCCATGGCAAGTCG +
Preference number: 6 (lower is better)
Translates to: HNLQVQEDEKHS*KQTIASSHGKS
Trigger: CGACTTGCCATGGCTGGAAGCGATAGTTTGCTTTCAGGAGTGTTTCTCGTCTTCTTGGACCTGGAGGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648444.1
CDS CCA 72 bp CACCACCAGGCTTTCAGTTTGAGCCTCAGAACCCTGTaGGGTCGGGTCTATCTTTTCCTTCATCTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: HHQAFSLSLRTL*GRVYLFLHLPD
Trigger: ATCTGGAAGATGAAGGAAAAGATAGACCCGACCCCACAGGGTTCTGAGGCTCAAACTGAAAGCCTGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS CAA 90 bp CAGCATCCCATCTTTGATCTAGTGTTGCTGCGACACCCAAACCTCTaGGGTCCATTTCCTCATCTGTCCTCCATGGCATGGAATCCTTAC +
Preference number: 6 (lower is better)
Translates to: QHPIFDLVLLRHPNL*GPFPHLSSMAWNPY
Trigger: GTAAGGATTCCATGCCATGGAGGACAGATGAGGAAATGGACCCAAGAGGTTTGGGTGTCGCAGCAACACTAGATCAAAGATGGGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS CAA 72 bp ATCTTTGATCTAGTGTTGCTGCGACACCCAAACCTCTaGGGTCCATTTCCTCATCTGTCCTCCATGGCATGG +
Preference number: 6 (lower is better)
Translates to: IFDLVLLRHPNL*GPFPHLSSMAW
Trigger: CCATGCCATGGAGGACAGATGAGGAAATGGACCCAAGAGGTTTGGGTGTCGCAGCAACACTAGATCAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487716.1
CDS TCA 72 bp AGTCCTTGTTTTCGGGGGTTGGAGACGGTAACCGGGTaGAATCTATCAGACCGGAAAGATCGTTCTCAATCA +
Preference number: 6 (lower is better)
Translates to: SPCFRGLETVTG*NLSDRKDRSQS
Trigger: TGATTGAGAACGATCTTTCCGGTCTGATAGATTTCACCCGGTTACCGTCTCCAACCCCCGAAAACAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259371.6
ENST00000309989.1
ENST00000373782.7
ENST00000408936.7
ENST00000648444.1
CDS TCA 72 bp GTGGGGTCGGGTCTATCTTTTCCTTCATCTTCCAGATaGGAAGACTGGAAATCATGGCTTCTGACACAACAC +
Preference number: 6 (lower is better)
Translates to: VGSGLSFPSSSR*EDWKSWLLTQH
Trigger: GTGTTGTGTCAGAAGCCATGATTTCCAGTCTTCTCATCTGGAAGATGAAGGAAAAGATAGACCCGACCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309989.1
CDS TCA 72 bp AATCCTGTCAGGACTAAAAAGGTGCACCCAGAAAGTTaGGGTGACCTGCCCAAGATCACATGCATAGCAAGT +
Preference number: 6 (lower is better)
Translates to: NPVRTKKVHPES*GDLPKITCIAS
Trigger: ACTTGCTATGCATGTGATCTTGGGCAGGTCACCTCAACTTTCTGGGTGCACCTTTTTAGTCCTGACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487716.1