Pregenerated sensors for CYP4A11 (Homo sapiens)
Ensembl gene IDs: ENSG00000187048Ensembl transcript IDs: ENST00000310638.9, ENST00000462347.5, ENST00000475477.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGGTTTTATaGCCCGGGCTTAGATTATGGTGCGTCAGGGTAGCCTTCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: QSHEPWILSKPRGVL*PGLRLWCVRVAFHP Trigger: AGGGTGGAAGGCTACCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR CCA 90 bp | CAGGGCGCCAAAGCTAAGGATGGAGGCTGTGAAGGCCCCGAGCTCTaGAAGTGCAGATTATTTATTGGTGATCAAACAAAGAAACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: QGAKAKDGGCEGPEL*KCRLFIGDQTKKQV Trigger: CACCTGTTTCTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTTAGCTTTGGCGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR GCA 90 bp | GCCAAAGCTAAGGATGGAGGCTGTGAAGGCCCCGAGCTCTGGAAGTaGAGATTATTTATTGGTGATCAAACAAAGAAACAGGTGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: AKAKDGGCEGPELWK*RLFIGDQTKKQVVR Trigger: TCTCACCACCTGTTTCTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTTAGCTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR GCA 90 bp | AACAAAGAAACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTaGATTAAGCACATGATTTACAGCTGTGACGGTTTAGCATCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NKETGGENVGVERAC*IKHMIYSCDGLASA Trigger: AGCAGATGCTAAACCGTCACAGCTGTAAATCATGTGCTTAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCCCTGGAAGGGGTTTTAGACCCTaGATCCTGGACATGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGARRQQVQTHSRATSPGRGFRP*ILDMIQ Trigger: TTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCT...TCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACAGGGGTTTTAGACCCTaGATCCTGGACATGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGRARSEEAASSDTFQSHRGFRP*ILDMIQ Trigger: TTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCT...GTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR-3UTR TCA 90 bp | CGTCAGGGTAGCCTTCCACCCTTCAGCACAGAGCTTGGTGTTCCAAAGGCCACACCTGGATCCTGGACATaGTCCAAGACTCTTTTACAT | + |
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Preference number: 2 (lower is better) Translates to: RQGSLPPFSTELGVPKATPGSWT*SKTLLH Trigger: ATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGG...TGTGGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGGGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCATCTGCTCTGCTACTTaGGATAATGGAGAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ILGEQGARRQQVQTHSRAICSAT*DNGEQV Trigger: AACCTGCTCTCCATTATCTCAAGTAGCAGAGCAGAT...GGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCGTTGCATTAAGCACATaGTTTACAGCTGTGACGGTT | + |
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Preference number: 2 (lower is better) Translates to: GEQGARRQQVQTHSRATSVALST*FTAVTV Trigger: AACCGTCACAGCTGTAAATCATGTGCTTAATGCAAC...GCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR CCA 90 bp | CAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGGTTTAGGGGTTTTAGACCCTaGATCCTGGACATGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: QTHSRATSPGFYPSHEGFRGFRP*ILDMIQ Trigger: TTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCT...AAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGTTCAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGCCCGAGCTCTGGAAGTaGAGATTATTTATTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: SKFRHIPEPRALDSIQATPELWK*RLFIGD Trigger: ATCACCAATAAATAATCTGCACTTCCAGAGCTCGGG...CGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGATACAATTGATCCTGGGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCACCTGGATCCTGGACATaGTCCAAGACTCTTTTACAT | + |
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Preference number: 2 (lower is better) Translates to: TQDTIDPGRARSEEAASSPGSWT*SKTLLH Trigger: ATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGG...TGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGATCAATTGTATCTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGATCCTGGACATGATCCAAGACTCTTTTACATTATGTCAGACATGCAAGCTATCTGCTCTGCTACTTaGGATAATGGAGAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LDPGHDPRLFYIMSDMQAICSAT*DNGEQV Trigger: AACCTGCTCTCCATTATCTCAAGTAGCAGAGCAGAT...AGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR-3UTR GCA 90 bp | TGCATTAAGCACATGATTTACAGCTGTGACGGTTTAGCATCTGCTCTGCTACTTCAAATTGTTTCCCGATaGAGTTCCTTGATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CIKHMIYSCDGLASALLLQIVSR*SSLILL Trigger: CAGGAGGATCAAGGAACTGCATCGGGAAACAATTTG...AAGTAGCAGAGCAGATGCTAAACCGTCACAGCTGTAAATCATGTGCTTAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| 3UTR CCA 72 bp | GCAGCAAGTTCAGACACATTCCAGAGCCACGAGCCCTaGATTCTATCCAAGCCACGAGGGGTTTTATGCCCC | + |
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Preference number: 3 (lower is better) Translates to: AASSDTFQSHEP*ILSKPRGVLCP Trigger: GGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGAAACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTGCATTAAGCAAGGGTCAAACACCTTaGGGCAAGGAGCGCCCATCA | + |
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Preference number: 3 (lower is better) Translates to: TKKQVVRMWGSKGHVALSKGQTP*GKERPS Trigger: TGATGGGCGCTCCTTGCCCAAAGGTGTTTGACCCTT...GCTTAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGATCCTGGACATGATCCAAGACTCTTTTACATTATGTCAGACATGCAAGCTTCCCGATGCAGTTCCTaGATCCTCCTGAGAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LDPGHDPRLFYIMSDMQASRCSS*ILLRRA Trigger: TGCCCTTCTCAGGAGGATCAAGGAACTGCATCGGGA...AGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| 3UTR GCA 72 bp | GACATGATCCAAGACTCTTTTACATTATGTCAGACATaGAAGCTCGGCCTCAGCTTCTCCCAACACTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: DMIQDSFTLCQT*KLGLSFSQHSA Trigger: AGCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| 3UTR GCA 72 bp | ACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTaGATTAAGCACATGATTTACAGCTGTGACGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: TGGENVGVERAC*IKHMIYSCDGL Trigger: TAAACCGTCACAGCTGTAAATCATGTGCTTAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| 3UTR CCA 72 bp | AAAGCTAAGGATGGAGGCTGTGAAGGCCCCGAGCTCTaGAAGTGCAGATTATTTATTGGTGATCAAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: KAKDGGCEGPEL*KCRLFIGDQTK Trigger: CTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTTAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | GTGCGTCAGGGTAGCCTTCCACCCTTCAGCACAGAGCTTGGTGTTCCAAAGGCCAGCTCCTGGTCCTGTTaGAGCTCCTGGATGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VRQGSLPPFSTELGVPKASSWSC*SSWMCP Trigger: CGGGCACATCCAGGAGCTCCAACAGGACCAGGAGCT...GGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | GGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCAGCTCCTGGTCCTGTTaGAGCTCCTGGATGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GEQGARRQQVQTHSRATSSSWSC*SSWMCP Trigger: CGGGCACATCCAGGAGCTCCAACAGGACCAGGAGCT...GCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACTCCTGTTGGAGCTCCTaGATGTGCCCGAAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGRARSEEAASSDTFQSHSCWSS*MCPKSQ Trigger: CTGGCTCTTCGGGCACATCCAGGAGCTCCAACAGGA...GTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | ATTATGGTGCGTCAGGGTAGCCTTCCACCCTTCAGCACAGAGCTTGGTGTTCCATCCTGTTGGAGCTCCTaGATGTGCCCGAAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IMVRQGSLPPFSTELGVPSCWSS*MCPKSQ Trigger: CTGGCTCTTCGGGCACATCCAGGAGCTCCAACAGGA...TGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACGCACCATAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | CCAGGTCGTGGGGGTGACAAAGTCCGGCAGAGTCAAAGCAGTGAGAAAAGACAGCAAAGAAACAGGTGGTaGGAATGTGGGGGTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PGRGGDKVRQSQSSEKRQQRNRW*ECGGRK Trigger: CTTTCGACCCCCACATTCTCACCACCTGTTTCTTTG...CTGTCTTTTCTCACTGCTTTGACTCTGCCGGACTTTGTCACCCCCACGACCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCCCTCCCATTCTCCATTTTaGCCAAGAGGAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: RARSEEAASSDTFQSHEPSHSPF*PRGGYP Trigger: TGGATATCCTCCTCTTGGCCAAAATGGAGAATGGGA...GGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310638.9 |
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| CDS-3UTR CCA 90 bp | CAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGGTTTGAGATTCAGGGATGTTaGGGTGTTCAGACCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: QTHSRATSPGFYPSHEGFEIQGC*GVQTQH Trigger: GTGTTGGGTCTGAACACCCCAACATCCCTGAATCTC...AAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCGAGATTCAGGGATGTTaGGGTGTTCAGACCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: EEAASSDTFQSHEPWILSEIQGC*GVQTQH Trigger: GTGTTGGGTCTGAACACCCCAACATCCCTGAATCTC...GGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | AAGGATGGAGGCTGTGAAGGCCCCGAGCTCTGGAAGTGCAGATTATTTATTGGTTGGAGAGGAGGACCATaGTACCTTTGGGCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KDGGCEGPELWKCRLFIGWRGGP*YLWARS Trigger: GCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCA...ACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310638.9 |
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| CDS-3UTR TCA 90 bp | ATCCTGGGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCCCTGGATCCTGGACATaGTCCAAGACTCTTTTACAT | + |
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Preference number: 4 (lower is better) Translates to: ILGEQGARRQQVQTHSRAPGSWT*SKTLLH Trigger: ATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGG...GGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | GTGCGTCAGGGTAGCCTTCCACCCTTCAGCACAGAGCTTGGTGTTCCAAAGGCCGTTGCATTAAGCACATaGTTTACAGCTGTGACGGTT | + |
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Preference number: 4 (lower is better) Translates to: VRQGSLPPFSTELGVPKAVALST*FTAVTV Trigger: AACCGTCACAGCTGTAAATCATGTGCTTAATGCAAC...GGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | TTTACATTATGTCAGACATGCAAGCTCGGCCTCAGCTTCTCCCAACACTCAGCTTGGAGAGGAGGACCATaGTACCTTTGGGCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FTLCQTCKLGLSFSQHSAWRGGP*YLWARS Trigger: GCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCA...AGCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000462347.5 |
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| CDS-3UTR TCA 90 bp | AGTTCAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGCCTGGATCCTGGACATaGTCCAAGACTCTTTTACAT | + |
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Preference number: 4 (lower is better) Translates to: SSDTFQSHEPWILSKPRGPGSWT*SKTLLH Trigger: ATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGG...CCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | CAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGGTTTATCTGCTCTGCTACTTaGGATAATGGAGAGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QTHSRATSPGFYPSHEGFICSAT*DNGEQV Trigger: AACCTGCTCTCCATTATCTCAAGTAGCAGAGCAGAT...AAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | AGTTCAGACACATTCCAGAGCCACGAGCCCTGGATTCTATCCAAGCCACGAGGGATCTGCTCTGCTACTTaGGATAATGGAGAGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSDTFQSHEPWILSKPRGICSAT*DNGEQV Trigger: AACCTGCTCTCCATTATCTCAAGTAGCAGAGCAGAT...CCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | CAAACAAAGAAACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTGCATTATCCTGTTGGAGCTCCTaGATGTGCCCGAAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QTKKQVVRMWGSKGHVALSCWSS*MCPKSQ Trigger: CTGGCTCTTCGGGCACATCCAGGAGCTCCAACAGGA...TAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | TTTTACATTATGTCAGACATGCAAGCTCGGCCTCAGCTTCTCCCAACACTCAGCAGACCAGGGGCCCTTTaGCCAAGAGGAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: FYIMSDMQARPQLLPTLSRPGAL*PRGGYP Trigger: TGGATATCCTCCTCTTGGCCAAAGGGCCCCTGGTCT...GCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462347.5 |
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| CDS-3UTR TCA 90 bp | GAGCTTGGTGTTCCAAAGGCCACAAGGGGTTTTAGACCCTGGATCCTGGACATGGTTGCATTAAGCACATaGTTTACAGCTGTGACGGTT | + |
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Preference number: 4 (lower is better) Translates to: ELGVPKATRGFRPWILDMVALST*FTAVTV Trigger: AACCGTCACAGCTGTAAATCATGTGCTTAATGCAAC...CATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | TACATTATGTCAGACATGCAAGCTCGGCCTCAGCTTCTCCCAACACTCAGCTTTAGGGGTTTTAGACCCTaGATCCTGGACATGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: YIMSDMQARPQLLPTLSFRGFRP*ILDMIQ Trigger: TTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCT...AAAGCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | CAAACAAAGAAACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTGCATTAGTCCAGGTGGTTCTTTaGCCAAGAGGAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: QTKKQVVRMWGSKGHVALVQVVL*PRGGYP Trigger: TGGATATCCTCCTCTTGGCCAAAGAACCACCTGGAC...TAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| CDS-3UTR TCA 90 bp | GATCCTGGACATGATCCAAGACTCTTTTACATTATGTCAGACATGCAAGCTCGGCAAAGAAACAGGTGGTaGGAATGTGGGGGTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: DPGHDPRLFYIMSDMQARQRNRW*ECGGRK Trigger: CTTTCGACCCCCACATTCTCACCACCTGTTTCTTTG...CCGAGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000310638.9 ENST00000475477.5 |
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| CDS-3UTR CCA 90 bp | GATCCTGGACATGATCCAAGACTCTTTTACATTATGTCAGACATGCAAGCTCGGAGGGGTTTTAGACCCTaGATCCTGGACATGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: DPGHDPRLFYIMSDMQARRGFRP*ILDMIQ Trigger: TTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCT...CCGAGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000310638.9 ENST00000462347.5 ENST00000475477.5 |
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| CDS-3UTR CAA 90 bp | GGAGAGCAAGGAGCGAGGAGGCAGCAAGTTCAGACACATTCCAGAGCCACGAGCCAGACCAGGGGCCCTTaGGCCAAGAGGAGGATATCC | + |
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Preference number: 5 (lower is better) Translates to: GEQGARRQQVQTHSRATSQTRGP*AKRRIS Trigger: GGATATCCTCCTCTTGGCCAAAGGGCCCCTGGTCTG...GCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462347.5 |
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| CDS-3UTR CAA 90 bp | CGTCAGGGTAGCCTTCCACCCTTCAGCACAGAGCTTGGTGTTCCAAAGGCCACAGGTCCAGGTGGTTCTTaGGCCAAGAGGAGGATATCC | + |
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Preference number: 5 (lower is better) Translates to: RQGSLPPFSTELGVPKATGPGGS*AKRRIS Trigger: GGATATCCTCCTCTTGGCCAAAGAACCACCTGGACC...TGTGGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| CDS-3UTR CAA 90 bp | AACAAAGAAACAGGTGGTGAGAATGTGGGGGTCGAAAGGGCATGTTGCATTAAGAAGGGTCAAACACCTTaGGGCAAGGAGCGCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: NKETGGENVGVERACCIKKGQTP*GKERPS Trigger: TGATGGGCGCTCCTTGCCCAAAGGTGTTTGACCCTT...CTTAATGCAACATGCCCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475477.5 |
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| CDS-3UTR CAA 90 bp | CTGGATCCTGGACATGATCCAAGACTCTTTTACATTATGTCAGACATGCAAGCTCTCCCATTCTCCATTTaGGCCAAGAGGAGGATATCC | + |
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Preference number: 5 (lower is better) Translates to: LDPGHDPRLFYIMSDMQALPFSI*AKRRIS Trigger: GGATATCCTCCTCTTGGCCAAAATGGAGAATGGGAG...AGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310638.9 |
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