RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP20A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119004

Ensembl transcript IDs: ENST00000356079.9, ENST00000428265.5, ENST00000429815.6, ENST00000431118.5, ENST00000443941.1, ENST00000449301.5, ENST00000461371.5, ENST00000463131.5, ENST00000489360.5, ENST00000613925.4

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACTCCAGTTGCATGAGGGTGTGCCATGATTCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTG +
Preference number: 1 (lower is better)
Translates to: DSSCMRVCHDSSGSE*LPDHLQMYYPLPSV
Trigger: CACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGAATCATGGCACACCCTCATGCAACTGGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428265.5
3UTR CCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCGAACAGTTTCACAAAGCACATGCTG +
Preference number: 1 (lower is better)
Translates to: KSVNFSFNILKLGRN*SQFGSSNSFTKHML
Trigger: CAGCATGTGCTTTGTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR GCA 90 bp AGTTCATACTTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACACTAAGAAGTACTGTGGTCACCATA +
Preference number: 1 (lower is better)
Translates to: SSYFVSITCPSTESR*SLFTNTLRSTVVTI
Trigger: TATGGTGACCACAGTACTTCTTAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAAGTATGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR TCA 90 bp AGTTATTCTACACTGCCTCATTTATTGGCAGTTATGCCAACTGGCTaGCTCTGGTTCAACTGCCCTATTTTTGCTTTCATCATTGTTTAT +
Preference number: 1 (lower is better)
Translates to: SYSTLPHLLAVMPTG*LWFNCPIFAFIIVY
Trigger: ATAAACAATGATGAAAGCAAAAATAGGGCAGTTGAACCAGAGTCAGCCAGTTGGCATAACTGCCAATAAATGAGGCAGTGTAGAATAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR GCA 90 bp CAATCATTATTAGTTATTCTACACTGCCTCATTTATTGGCAGTTATaGCAACTGGCTGACTCTGGTTCAACTGCCCTATTTTTGCTTTCA +
Preference number: 1 (lower is better)
Translates to: QSLLVILHCLIYWQL*QLADSGSTALFLLS
Trigger: TGAAAGCAAAAATAGGGCAGTTGAACCAGAGTCAGCCAGTTGGCATAACTGCCAATAAATGAGGCAGTGTAGAATAACTAATAATGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGCTCACCGCAACCTCTaGCTCCCAGGTTCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLAHRNL*LPGSSS
Trigger: ACTGCTTGAACCTGGGAGGCAGAGGTTGCGGTGAGC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACCCTGTCGCCCAGGCTaGAGTGCACTAGCACAACAT +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLPCRPG*SALAQH
Trigger: ATGTTGTGCTAGTGCACTCCAGCCTGGGCGACAGGG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAAGGTGTGAGCCACTGTaGCCGGCCATGCTTATGTTT +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLRCEPL*PAMLMF
Trigger: AAACATAAGCATGGCCGGGCACAGTGGCTCACACCT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGGGGTTTCATCATGTTaGCCAGACTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLGVSSC*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGCCAACATGATGAAACCCC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAAGCCTCCTGAGTAGCTaGGATTACAAATGTGCACCA +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSLLSS*DYKCAP
Trigger: TGGTGCACATTTGTAATCCCAGCTACTCAGGAGGCT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGTAATCCGAGCACTTTaGGAGGCCGAGCCTATGTTT +
Preference number: 2 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLVIRAL*EAEPMF
Trigger: AAACATAGGCTCGGCCTCCCAAAGTGCTCGGATTAC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613925.4
3UTR-3UTR GCA 90 bp AGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATGCAAAACCAAGCATATaGTGGCTGAGGGGCACGTGC +
Preference number: 2 (lower is better)
Translates to: RILKYHTKGIKDEGLSRNAKPSI*WLRGTC
Trigger: GCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGC...ATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTACTTCGGACCTCAGGTaGTCCACCCGCCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFTSDLR*STRLDL
Trigger: GAGGTCGAGGCGGGTGGATCACCTGAGGTCCGAAGT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTGGTCGCAAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLVANS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTTGCGACCAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGGTAACAAAGGAAGATaGTCTATACACACAAAACCA +
Preference number: 2 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLGNKGR*SIHTKP
Trigger: TGGTTTTGTGTGTATAGAGCATCTTCCTTTGTTACC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGTGAGCCGAGATGGTaGCATGGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSEPRW*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCACCATCTCGGCTCACT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTCCTGTTGGCCAGGCTaGCCTCGAACTTCGGACCTC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSCWPG*PRTSDL
Trigger: GAGGTCCGAAGTTCGAGGCCAGCCTGGCCAACAGGA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCCAAGTTGGCCTGGCTaGTCTCGAACACCTGACCTC +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEPSWPG*SRTPDL
Trigger: GAGGTCAGGTGTTCGAGACCAGCCAGGCCAACTTGG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGCCGAGATGGTGCCATaGCACTCCAGCCTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFAEMVP*HSSLGN
Trigger: ATTGCCCAGGCTGGAGTGCCATGGCACCATCTCGGC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTGAGGGCAGTGGTGTaGTCACAGCTCACTGAAGCC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLRAVV*SQLTEA
Trigger: GGCTTCAGTGAGCTGTGATCACACCACTGCCCTCAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTACTCCCAACCTCAGGTaGTTTACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFTPNLR*FTRLGL
Trigger: GAGGCCAAGGCGGGTAAATCACCTGAGGTTGGGAGT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGCTGGAGTGCAGGGGTaGAATCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFAGVQG*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCGCCCAGGCTGGAGTaGACTAGCACAACATCAGCT +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESPRLE*TSTTSA
Trigger: AGCTGATGTTGTGCTAGTGCACTCCAGCCTGGGCGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTTGCCCAGGCTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLPRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAGCCTGGGCAA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCATGTTGGCCAGGCTaGTCGCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESCWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGCGACCAGCCTGGCCAACATGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGGGTTTCATCCTGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFERVSSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACAGGATGAAACCCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCATATTCAACAAACATaGTTCCCCAACTTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLHIQQT*FPNFCK
Trigger: TTTGCAGAAGTTGGGGAATCATGTTTGTTGAATATG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
3UTR-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGATCACTGCAGCCTTaGCCTCTCCTGGTCTCAAGT +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFERSLQP*PLLVSS
Trigger: ACTTGAGACCAGGAGAGGTCAAGGCTGCAGTGATCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCTGGTCTCGAACACCTaGCCTCAATTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFELVSNT*PQLIHL
Trigger: CAGGTGGATCAATTGAGGTCAGGTGTTCGAGACCAG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp CACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTACTAATTCACAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: HSCVPENPSEEKVFITNSQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...TGAATTAGTAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGGGTCTCCCAATGTTaGCTGGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFERVSQC*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGGCAACATTGGGAGACCCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTTCAAGCAGTTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEFKQFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAACTGCTTGAA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTACACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 2 (lower is better)
Translates to: SITCPSTESRCSLFTNTLHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGGGATTAAAGGCATGTaGCACCACGCCCGGCTAATT +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFGIKGM*HHARLI
Trigger: AATTAGCCGGGCGTGGTGGCACATGCCTTTAATCCC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCATGTTGGCCAGACTaGTCTCAAACTCTGGACCTC +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESCWPD*SQTLDL
Trigger: GAGGTCCAGAGTTTGAGACCAGTCTGGCCAACATGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTTCAAGCGATTATCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFFKRLS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGATAATCGCTTGAA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp ATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCCTTGTACTAAGGAGCACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 2 (lower is better)
Translates to: IILSSRICWSLRFPCTKEHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...CTCCTTAGTACAAGGGAACCTTAATGACCAACAGATCCTAGAAGACAGTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTATAGAAACAAGCTTTTaGCACGTTGCCCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFIETSF*HVAQAG
Trigger: ACCAGCCTGGGCAACGTGGCAAAAGCTTGTTTCTAT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTCCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: SIRILKYHTKGIKDEGLSPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...AGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCTAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR-3UTR TCA 90 bp GTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTGCCACCACCAGATTaGTACCTTAATAATGACTTC +
Preference number: 2 (lower is better)
Translates to: VSITCPSTESRCSLFTNTLPPPD*YLNNDF
Trigger: GAAGTCATTATTAAGGTATCAATCTGGTGGTGGCAG...TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR-3UTR TCA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTACATGAGGGTGTGCCATaGTTCTTCTGGAAGCGAATG +
Preference number: 2 (lower is better)
Translates to: MQLARENIILSSRICWSLHEGVP*FFWKRM
Trigger: CATTCGCTTCCAGAAGAATCATGGCACACCCTCATG...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428265.5
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTTCAAGCAATTTTCCTaGCTCAGCGTCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFFKQFS*LSVSSS
Trigger: GCTACTTGAGACGCTGAGGCAGGAAAATTGCTTGAA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp TTTCGTTCTTTTATGATGTTCCTTAAAACAGACTCCAGTTGCATGAGGGTGTGCGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 2 (lower is better)
Translates to: FRSFMMFLKTDSSCMRVCGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...GCACACCCTCATGCAACTGGAGTCTGTTTTAAGGAACATCATAAAAGAACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428265.5
3UTR-3UTR GCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTGGAGTCAGGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 2 (lower is better)
Translates to: KSVNFSFNILKLGRNWSQGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...CTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCTCACTATCTGTACTTaGCATATTTCCTACAGTGGC +
Preference number: 2 (lower is better)
Translates to: YISIGYSNLLPPVSNPFELTICT*HISYSG
Trigger: GCCACTGTAGGAAATATGCCAAGTACAGATAGTGAG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTTGAACTCCCAAAGTaGTTGAGTTATAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLELPK*LSYRHE
Trigger: CTCATGCCTATAACTCAAGCACTTTGGGAGTTCAAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR GCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAACCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAAAATTAGCCAGGTGTaGTGGCACATGTTTGCAATC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFKISQV*WHMFAI
Trigger: GATTGCAAACATGTGCCACCACACCTGGCTAATTTT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAATCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 2 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKSSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTCTTTCATCTCATCTaGTCTGACACTTGGTTTACA +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLFHLI*SDTWFT
Trigger: TGTAAACCAAGTGTCAGATCAGATGAGATGAAAGAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp TTTCGTTCTTTTATGATGTTCCTTAAAACAGACTCCAGTTGCATGAGGGTGTGCCTGCCACCACCAGATTaGTACCTTAATAATGACTTC +
Preference number: 2 (lower is better)
Translates to: FRSFMMFLKTDSSCMRVCLPPPD*YLNNDF
Trigger: GAAGTCATTATTAAGGTATCAATCTGGTGGTGGCAG...GCACACCCTCATGCAACTGGAGTCTGTTTTAAGGAACATCATAAAAGAACGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428265.5
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCATATTCAACAAACATaGTTCCCCAACTTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFHIQQT*FPNFCK
Trigger: TTTGCAGAAGTTGGGGAATCATGTTTGTTGAATATG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTACTTAAAATATTCTTaGAATAGCTCTCCCCACCTC +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFYLKYS*NSSPHL
Trigger: GAGGTGGGGAGAGCTATTTCAAGAATATTTTAAGTA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTCATCTCATCTGATCTaGCACTTGGTTTACATATCA +
Preference number: 2 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSSHLI*HLVYIS
Trigger: TGATATGTAAACCAAGTGTCAGATCAGATGAGATGA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACAGGGTTTCATCCTGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLQGFIL*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACAGGATGAAACCCTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACAGATCACTGCAGCCTaGACCTCTCCTGGTCTCAAG +
Preference number: 3 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLQITAA*TSPGLK
Trigger: CTTGAGACCAGGAGAGGTCAAGGCTGCAGTGATCTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR GCA 72 bp GGAGATGGAGGTTGTAGTGAGCCCAGATCATGCCACTaGACTCAAGCCTGGGCTGAGACCTCCAGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: GDGGCSEPRSCH*TQAWAETSRVW
Trigger: CCAGACTCTGGAGGTCTCAGCCCAGGCTTGAGTGCAGTGGCATGATCTGGGCTCACTACAACCTCCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR TCA 72 bp GTGGCATGCATATGTAGTCCCAGCTATTCTAGAGGCTaGGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: VACICSPSYSRG*GEIAGAQEVEA
Trigger: AGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGGGACTACATATGCATGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR GCA 72 bp AACTGGGGAGATGGAGGTTGTAGTGAGCCCAGATCATaGCACTGCACTCAAGCCTGGGCTGAGACCTCCAGA +
Preference number: 3 (lower is better)
Translates to: NWGDGGCSEPRS*HCTQAWAETSR
Trigger: TCTGGAGGTCTCAGCCCAGGCTTGAGTGCAGTGGCATGATCTGGGCTCACTACAACCTCCATCTCCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGTAATCCGAGCACTTaGGGAGGCCGAGCCTATGTT +
Preference number: 3 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLCNPST*GGRAYV
Trigger: AACATAGGCTCGGCCTCCCAAAGTGCTCGGATTACA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613925.4
3UTR-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCAGGGTTTCATCATGTaGGCCAGGCTGGTCGCAAAC +
Preference number: 3 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEQGFIM*ARLVAN
Trigger: GTTTGCGACCAGCCTGGCCAACATGATGAAACCCTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCAGGGTCTCCCAATGTaGCCTGGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFQGLPM*PGLVSN
Trigger: GTTTGAGACCAGCCCAGGCAACATTGGGAGACCCTG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR CCA 72 bp TCTCGCCTCAGCCTCCTGAATAGTTGGGACTGCAGGTaGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTT +
Preference number: 3 (lower is better)
Translates to: SRLSLLNSWDCR*CHQGWLSFYIF
Trigger: AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATTCAGGAGGCTGAGGCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTGGGGTTTCATCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEWGFIM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGATGAAACCCCA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCCTCACTATCTGTACTaGGCATATTTCCTACAGTGG +
Preference number: 3 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFPHYLY*AYFLQW
Trigger: CCACTGTAGGAAATATGCCAAGTACAGATAGTGAGG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR-3UTR CAA 90 bp TACTTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCCCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 3 (lower is better)
Translates to: YFVSITCPSTESRCSLFTPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...GGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR-3UTR CAA 90 bp GTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 3 (lower is better)
Translates to: VSITCPSTESRCSLFTNTPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR GCA 72 bp CCATATATGCAAACCTCAACTCTGGACACTCCTGTGTaGCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTA +
Preference number: 3 (lower is better)
Translates to: PYMQTSTLDTPV*LRIQVRKKFSL
Trigger: TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGCATATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR GCA 72 bp TTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACACTAAGAAGTACTGTG +
Preference number: 3 (lower is better)
Translates to: FVSITCPSTESR*SLFTNTLRSTV
Trigger: CACAGTACTTCTTAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR CCA 72 bp AATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCGAACAGTTTCACAAAG +
Preference number: 3 (lower is better)
Translates to: NFSFNILKLGRN*SQFGSSNSFTK
Trigger: CTTTGTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR TCA 72 bp CTCACTTGCTTTAAACTCCACCTCTTTCATCTCATCTaGTCTGACACTTGGTTTACATATCAATTGGCTACT +
Preference number: 3 (lower is better)
Translates to: LTCFKLHLFHLI*SDTWFTYQLAT
Trigger: AGTAGCCAATTGATATGTAAACCAAGTGTCAGATCAGATGAGATGAAAGAGGTGGAGTTTAAAGCAAGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
3UTR GCA 72 bp AACAGATTGCCCAGGTACACAATTTTGCAGTTATTATaGAACTGGCCAGAGAAAATATCATACTGTCTTCTA +
Preference number: 3 (lower is better)
Translates to: NRLPRYTILQLL*NWPEKISYCLL
Trigger: TAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCATAATAACTGCAAAATTGTGTACCTGGGCAATCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
3UTR CCA 72 bp CTAGAATCATTCTATAAGCCATCAGTGACAGTGAAGTaGCCAAAATTTGAGTCACTTGATAAGTACAAAGAA +
Preference number: 3 (lower is better)
Translates to: LESFYKPSVTVK*PKFESLDKYKE
Trigger: TTCTTTGTACTTATCAAGTGACTCAAATTTTGGCCACTTCACTGTCACTGATGGCTTATAGAATGATTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACTGGTCGCAAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLLVANS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTTGCGACCAG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATCCTGTTGGCCAGGCTaGCCTCGAACTTCGGACCTC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSCWPG*PRTSDL
Trigger: GAGGTCCGAAGTTCGAGGCCAGCCTGGCCAACAGGA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGCCGAGATGGTGCCATaGCACTCCAGCCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLAEMVP*HSSLGN
Trigger: ATTGCCCAGGCTGGAGTGCCATGGCACCATCTCGGC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAACTCCCAACCTCAGGTaGTTTACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLTPNLR*FTRLGL
Trigger: GAGGCCAAGGCGGGTAAATCACCTGAGGTTGGGAGT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATGGGACTGCAGGTGGTaGCACCAAGGCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLWDCRW*HQGWLS
Trigger: ACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACACACTGGAGTGCAATaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLHTGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCATTGCACTCCAGTGTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACACTGCACTCAAGCCTaGGCTGAGACCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLHCTQA*AETSRV
Trigger: GACTCTGGAGGTCTCAGCCCAGGCTTGAGTGCAGTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGTAGCCTTGACTTCCTaGGCTCAAGCCATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLVALTS*AQAILS
Trigger: CGAGAGGATGGCTTGAGCTCAGGAAGTCAAGGCTAC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGCACTCCAGCCTGGTaGCAGAGGGAGACTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLCTPAW*QRETRS
Trigger: AGACCGAGTCTCCCTCTGTCACCAGGCTGGAGTGCA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCGCGAAGTCCAACATaGTTCTGCCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSRSPT*FCRPGS
Trigger: GCTCCCTGGGCGGCAGAACCATGTTGGACTTCGCGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAAGCCTCCTGAATAGTTaGGACTGCAGGTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSLLNS*DCRWCH
Trigger: GTGGCACCACCTGCAGTCCCAACTATTCAGGAGGCT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATTTGGGAAGCCGCGGTaGACAGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLFGKPR*TDHKVR
Trigger: CCTGACCTTGTGATCTGTCCACCGCGGCTTCCCAAA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCCAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLHSKTKHMLAEGHVLGLQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...GAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACTGGTCTCGAACACCTaGCCTCAATTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLLVSNT*PQLIHL
Trigger: CAGGTGGATCAATTGAGGTCAGGTGTTCGAGACCAG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTGAGGGCAGTGGTGTaGTCACAGCTCACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLRAVV*SQLTEA
Trigger: GGCTTCAGTGAGCTGTGATCACACCACTGCCCTCAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATTGCTCTGTCAACCATaGGGGAGTGCAGTGGCACTA +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLLLCQP*GSAVAL
Trigger: TAGTGCCACTGCACTCCCTCATGGTTGACAGAGCAA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGGCAGGAGAATTGCTTaGACCTGGGAGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLGRRIA*TWEAGV
Trigger: AACCCCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGGGGGAGGTTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLRGRLQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCAACCTCCCCCT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGAGCAAAACCAAGCATATaGTGGCTGAGGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SKTKHMLAEGHVLGLWVGAKPSI*WLRGTC
Trigger: GCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGC...TCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGGGATTAAAGGCATGTaGCACCACGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLGIKGM*HHARLI
Trigger: AATTAGCCGGGCGTGGTGGCACATGCCTTTAATCCC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTGGGAAGCAGAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLGSRG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTCTGCTTCCCAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCCCTGTCGCCCAGGCTaGAGTGCACTAGCACAACAT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLPCRPG*SALAQH
Trigger: ATGTTGTGCTAGTGCACTCCAGCCTGGGCGACAGGG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCATGGCACTCCAGCCTaGGCAATAGACAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLHGTPA*AIDSGT
Trigger: AGTCCCGCTGTCTATTGCCCAGGCTGGAGTGCCATG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTGAGCCTAGGAGTTTaGGACAAGACTGGGCGACGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLSLGV*DKTGRR
Trigger: GCGTCGCCCAGTCTTGTCTCAAACTCCTAGGCTCAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGCAAAACCAAGCATATaGTGGCTGAGGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLAKPSI*WLRGTC
Trigger: GCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGTGAGCCCAGATCATaGCACTGCACTCAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSEPRS*HCTQAW
Trigger: CCAGGCTTGAGTGCAGTGGCATGATCTGGGCTCACT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGAGAGCCATTTCACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 4 (lower is better)
Translates to: KHMLAEGHVLGLWVGEPFHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...AAATGGCTCTCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAACCAAGCATATGCTaGCTGAGGGGCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKPSIC*LRGTCW
Trigger: CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCATGTTGGCCAGGCTaGTCGCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSCWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGCGACCAGCCTGGCCAACATGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGTCATGTTGGCCAGGCTaGTCGCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LHSKTKHMLAEGHVLGLWSCWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGCGACCAGCCTGGCCAACATGA...CCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGATCACTGCAGCCTTaGCCTCTCCTGGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLRSLQP*PLLVSS
Trigger: ACTTGAGACCAGGAGAGGTCAAGGCTGCAGTGATCT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLNPWNS*SLSGSR
Trigger: CCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTGGACACTCCTGTGTaGCTGAGAATCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLDTPV*LRIQVR
Trigger: CCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGGGTCTCCCAATGTTaGCTGGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLRVSQC*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGGCAACATTGGGAGACCCT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGTGATCACAGATCACTaGAGCCTTGACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLVITDH*SLDLSW
Trigger: CCAGGAGAGGTCAAGGCTGCAGTGATCTGTGATCAC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAATAGAAACAAGCTTTTaGCACGTTGCCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLIETSF*HVAQAG
Trigger: ACCAGCCTGGGCAACGTGGCAAAAGCTTGTTTCTAT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCTGGGAGGCTGAGTTaGGCAGATCACAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSGRLS*ADHKVK
Trigger: CTTGACCTTGTGATCTGCCCAACTCAGCCTCCCAGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGAGAATCGCTTGAACTaGGGAGATGGAGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLENRLN*GDGGCS
Trigger: ACTACAACCTCCATCTCCCCAGTTCAAGCGATTCTC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp GCAAACCTCAACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAACAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ANLNSGHSCVPENPSEEKQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...TTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACAGACTCCAGTTGCATaGGGGCATCTTCATATTGTT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLQTPVA*GHLHIV
Trigger: AACAATATGAAGATGCCCTCATGCAACTGGAGTCTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATCACAAAGCACATGCTaGCAATATCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSQSTC*QYLSCS
Trigger: TGAGCAGCTCAGATATTGTCAGCATGTGCTTTGTGA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGAGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: SKTKHMLAEGHVLGLWVGGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...TCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCACGCATGAGCCACTGTaGCCTGCCCCAATATTTTGT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLTHEPL*PAPIFC
Trigger: ACAAAATATTGGGGCAGGGCACAGTGGCTCATGCGT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGTGGTGGCACATGTTTaGAATCCCAGCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLVVAHV*NPSYLG
Trigger: TCCCAAGTAGCTGGGATTGCAAACATGTGCCACCAC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAGCTTTTGCCACGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKLLPR*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACGTGGCAAAAGCTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTCCTGCAGCTTGTCTaGAAGCCGGATAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLFLQLV*KPDRGR
Trigger: TCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSWSNP*NSCSLS
Trigger: AGACAAGCTGCAGGAATTCCAGGGATTACTCCAACT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCCACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 4 (lower is better)
Translates to: RLHSKTKHMLAEGHVLGLHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...GAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp GTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGAAACCAAGCATATGCTaGCTGAGGGGCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VTDFIAKPSICWLRGTCWKPSIC*LRGTCW
Trigger: CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTT...CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKLGRN*SQFGSS
Trigger: CGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCATGTTGGCCAGACTaGTCTCAAACTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSCWPD*SQTLDL
Trigger: GAGGTCCAGAGTTTGAGACCAGTCTGGCCAACATGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGGGTTTCATCATGTTaGCCAGGCTGGTCGCAAACT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLRVSSC*PGWSQT
Trigger: AGTTTGCGACCAGCCTGGCCAACATGATGAAACCCT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp GCAAACCTCAACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAATCCTGTTGGCCAGGCTaGCCTCGAACTTCGGACCTC +
Preference number: 4 (lower is better)
Translates to: ANLNSGHSCVPENPSEEKSCWPG*PRTSDL
Trigger: GAGGTCCGAAGTTCGAGGCCAGCCTGGCCAACAGGA...TTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp GTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGAGGGTTTCATCCTGTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VTDFIAKPSICWLRGTCWRVSSC*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAACAGGATGAAACCCT...CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACACTGCCTCATTTATTaGCAGTTATGCCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLHCLIY*QLCQLA
Trigger: AGCCAGTTGGCATAACTGCCAATAAATGAGGCAGTG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTTGGGAGGTCAAGGTaGGCAGACTACTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLFGRSR*ADYLRL
Trigger: CAACCTCAAGTAGTCTGCCCACCTTGACCTCCCAAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCCACGTTGCCCAGGCTaGTCTCAAACTTCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLPRCPG*SQTSKS
Trigger: GCTTTTAGAAGTTTGAGACCAGCCTGGGCAACGTGG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSSGSE*LPDHLQ
Trigger: TTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGACCAAACTGTGCCATaGTTCTTCTGGAAGCGAATG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLDQTVP*FFWKRM
Trigger: CATTCGCTTCCAGAAGAATCATGGCACAGTTTGGTC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAAGTATTAGGATCCTaGAGTACCACACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQVLGS*STTPRA
Trigger: TGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCCAGACTCCAGTTGCATaGGGGTGTGCCATGATTCTT +
Preference number: 4 (lower is better)
Translates to: RLHSKTKHMLAEGHVLGLQTPVA*GCAMIL
Trigger: AAGAATCATGGCACACCCTCATGCAACTGGAGTCTG...GAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428265.5
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACA +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSTESR*SLFTNT
Trigger: TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTGCCTAAGCTGGAGTaGAGTGGCACAATCTCAACT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLPKLE*SGTIST
Trigger: AGTTGAGATTGTGCCACTGCACTCCAGCTTAGGCAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTTCCTGCAGCTTGTCTaGAAGCCGGATAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLHSKTKHMLAEGHVLGLFLQLV*KPDRGR
Trigger: TCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAA...GAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACTGCTCAATTTTCTCTaGAGTAACAGGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLLLNFL*SNRTIS
Trigger: GGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCAG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAAAACTTGTGTGGAGATaGCCAAGTATTAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLKLVWR*PSIRIL
Trigger: CAGGATCCTAATACTTGGCCATCTCCACACAAGTTT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTAGTCTCAAACACCTaGACTCACCCAATAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLVSNT*THPISL
Trigger: CAGGCTTATTGGGTGAGTCCAGGTGTTTGAGACTAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAGACTCCAGTTGCATaGGGGCATCTTCATATTGTT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQTPVA*GHLHIV
Trigger: AACAATATGAAGATGCCCTCATGCAACTGGAGTCTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCACAAAGCACATGCTaGCAATATCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSQSTC*QYLSCS
Trigger: TGAGCAGCTCAGATATTGTCAGCATGTGCTTTGTGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCATCTCTTTGAGACAGTaGTCCAAGCTTCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLISLRQ*SKLLPL
Trigger: CAAGGGAAGAAGCTTGGATCACTGTCTCAAAGAGAT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp ACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTAACTTCGGACCTCAGGTaGTCCACCCGCCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: TLDTPVCLRIQVRKKFSLTSDLR*STRLDL
Trigger: GAGGTCGAGGCGGGTGGATCACCTGAGGTCCGAAGT...TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCACTCAAGCCTGGGCTaGGACCTCCAGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEHSSLG*DLQSLA
Trigger: AGCCAGACTCTGGAGGTCTCAGCCCAGGCTTGAGTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCTCAGACCAAACTGTaGCATGATTCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSQTKL*HDSSGS
Trigger: GCTTCCAGAAGAATCATGGCACAGTTTGGTCTGAGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGTGAGCCGAGATGGTaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESEPRW*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCACCATCTCGGCTCACT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCGCGAAGTCCAACATaGTTCTGCCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESRSPT*FCRPGS
Trigger: GCTCCCTGGGCGGCAGAACCATGTTGGACTTCGCGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAATCGCGAAGTCCAACATaGTTCTGCCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKSRSPT*FCRPGS
Trigger: GCTCCCTGGGCGGCAGAACCATGTTGGACTTCGCGA...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTATCGCGAAGTCCAACATaGTTCTGCCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SITCPSTESRCSLFTNTLSRSPT*FCRPGS
Trigger: GCTCCCTGGGCGGCAGAACCATGTTGGACTTCGCGA...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSWSNP*NSCSLS
Trigger: AGACAAGCTGCAGGAATTCCAGGGATTACTCCAACT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAATAATGACTTCAGCATaGTTTCAAAAGGGTCCGATG +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLIMTSA*FQKGPM
Trigger: CATCGGACCCTTTTGAAACCATGCTGAAGTCATTAT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCCCATTCGAGGTACTTaGGTAACAAAGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLPIRGT*VTKEDA
Trigger: AGCATCTTCCTTTGTTACCCAAGTACCTCGAATGGG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATCAGTGACAGTGAAGTaGCCAAAATTTGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLSVTVK*PKFESL
Trigger: AAGTGACTCAAATTTTGGCCACTTCACTGTCACTGA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGAGAGCCATTTTCCGTTTTCTTCAGTTaGAGTAATCCCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KHMLAEGHVLGLWVGEPFSVFFS*SNPWNS
Trigger: GGAATTCCAGGGATTACTCCAACTGAAGAAAACGGA...AAATGGCTCTCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAATGTCTTATTGGGATTaGTATGCTGCTTCAGTACAT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLMSYWD*YAASVH
Trigger: ATGTACTGAAGCAGCATATCAATCCCAATAAGACAT...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp ACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTACAAGCATATGCTGGCTaGGGGGCACGTGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLDTPVCLRIQVRKKFSLQAYAG*GARAGS
Trigger: AGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTG...TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSSGSE*LPDHLQ
Trigger: TTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCATGCTGACAATATCTaGGCTGCTCAATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLHADNI*AAQFSL
Trigger: CAGAGAAAATTGAGCAGCTCAGATATTGTCAGCATG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTCTGGTCGCAAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: NSGHSCVPENPSEEKVFILVANS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTTGCGACCAG...AATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTAGATAGTTCAATAACTTaGGTCCTGCTAGAATCATTC +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLDSSIT*VLLESF
Trigger: GAATGATTCTAGCAGGACTCAAGTTATTGAACTATC...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGGCGGGAGGATCACTTaGACCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEGGRIT*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGTGATCCTCCCGCC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCCTGGCAAACATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSWQTW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATGTTTGCCAGGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGGCCCATATCTCTCATaGAAATTAACCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLGPYLS*KLTRNS
Trigger: TGAGTTCCTGGTTAATTTGCATGAGAGATATGGGCC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGACCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: SKTKHMLAEGHVLGLWVGPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...TCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGTGGTCACCATATATaGAAACCTCAACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLCGHHI*KPQLWT
Trigger: TGTCCAGAGTTGAGGTTTGCATATATGGTGACCACA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSTESR*SLFTNT
Trigger: TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTTGAACTCCCAAAGTaGTTGAGTTATAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLELPK*LSYRHE
Trigger: CTCATGCCTATAACTCAAGCACTTTGGGAGTTCAAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGTGAGCCAAGATCGTaGCACCACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESEPRS*HHTPAW
Trigger: CCAGGCTGGAGTGTGGTGGCACGATCTTGGCTCACT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCACCCACACTGGAGTaGAATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESPTLE*NGAISA
Trigger: AGCCGAGATCGCGCCATTGCACTCCAGTGTGGGTGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCTGCTCAATTTTCTCTaGAGTAACAGGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLLNFL*SNRTIS
Trigger: GGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCAG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAACTGGAGTCAGTTTaGCAGTTCGAACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKLESV*QFEQFH
Trigger: GTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp GGGGCACGTGCTGGGTCTCTGGGTAGGAGAGCCATTTATCTAATAATTCTTCTGAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GARAGSLGRRAIYLIILLKLGRN*SQFGSS
Trigger: CGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTT...CAGAAGAATTATTAGATAAATGGCTCTCCTACCCAGAGACCCAGCACGTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAACTTGTGTGGAGATaGCCAAGTATTAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKLVWR*PSIRIL
Trigger: CAGGATCCTAATACTTGGCCATCTCCACACAAGTTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGGATCAAACTTGTGTaGAGATGGCCAAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLWIKLV*RWPSIR
Trigger: CCTAATACTTGGCCATCTCCACACAAGTTTGATCCA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAAATTAGCCAGGTGTaGTGGCACATGTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKISQV*WHMFAI
Trigger: GATTGCAAACATGTGCCACCACACCTGGCTAATTTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATGGTGCCACCAAGGCTaGCTAAGTTTTTATATTTTT +
Preference number: 4 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLWCHQG*LSFYIF
Trigger: AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGTTGGGACTGCAGGTaGTGCCACCAAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESWDCR*CHQGWL
Trigger: TAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGTGATCACAGCTCACTaGAGCCTCCAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFVITAH*SLQLLG
Trigger: GCCCAGGAGTTGGAGGCTTCAGTGAGCTGTGATCAC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGGCAAGAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEGKRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTCTTGCC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGCACTCTGGGAGGCTaGGTTGGGCAGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSTLGG*VGQITR
Trigger: CCTTGTGATCTGCCCAACTCAGCCTCCCAGAGTGCT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCCTCCAGAGTCTGGCTaGGACCTATGGAGTCTCACT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEPPESG*DLWSLT
Trigger: AGTGAGACTCCATAGGTCTCAGCCAGACTCTGGAGG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTGGGATTGATATGCTaGTTCAGTACATCAACAGTG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLGLIC*FSTSTV
Trigger: CACTGTTGATGTACTGAAGCAGCATATCAATCCCAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAAGCAAAACCAAGCATATaGTGGCTGAGGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKAKPSI*WLRGTC
Trigger: GCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGC...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAAACAGACTCCAGTTaGATGAGGGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKTDSS*MRASSY
Trigger: ATATGAAGATGCCCTCATGCAACTGGAGTCTGTTTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCATAATGACTTCAGCATaGTTTCAAAAGGGTCCGATG +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLIMTSA*FQKGPM
Trigger: CATCGGACCCTTTTGAAACCATGCTGAAGTCATTAT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAAACCAAGCATATGCTaGCTGAGGGGCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEKPSIC*LRGTCW
Trigger: CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp CTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: LVWRWPSIRILKYHTKGIKLGRN*SQFGSS
Trigger: CGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTT...TATGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCATCATCAAACCGATCTaGATCAAACTTGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLIIKPI*IKLVWR
Trigger: TCTCCACACAAGTTTGATCCAGATCGGTTTGATGAT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp AGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTTCATGTTGGCCAGACTaGTCTCAAACTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: SIRILKYHTKGIKDEGLSSCWPD*SQTLDL
Trigger: GAGGTCCAGAGTTTGAGACCAGTCTGGCCAACATGA...AGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCTAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCCAAGTTGGCCTGGCTaGTCTCGAACACCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFPSWPG*SRTPDL
Trigger: GAGGTCAGGTGTTCGAGACCAGCCAGGCCAACTTGG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCAGGCTGGAGTGCAATaGCACGATCTCGGCTCATCG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFQAGVQ*HDLGSS
Trigger: CGATGAGCCGAGATCGTGCCATTGCACTCCAGCCTG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGCAATCTCAACACTTTaGGAGGCCCAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEAISTL*EAQVGG
Trigger: TCCTCCCACCTGGGCCTCCCAAAGTGTTGAGATTGC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGTAATCCCAGCACTCTaGGAGGCTGAGTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEVIPAL*EAELGR
Trigger: TCTGCCCAACTCAGCCTCCCAGAGTGCTGGGATTAC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGCTCGTCACCCACACTaGAGTGCAATGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFARHPH*SAMARS
Trigger: AGATCGCGCCATTGCACTCCAGTGTGGGTGACGAGC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCATGTCTTATTGGGATTaGTATGCTGCTTCAGTACAT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLMSYWD*YAASVH
Trigger: ATGTACTGAAGCAGCATATCAATCCCAATAAGACAT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCAAGCGAATGACTTCCTaGTCATCTTCAAATGTACTA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLKRMTS*SSSNVL
Trigger: TAGTACATTTGAAGATGATCAGGAAGTCATTCGCTT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR TCA 90 bp GCAAACCTCAACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAACAAGTATTAGGATCCTaGAGTACCACACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ANLNSGHSCVPENPSEEKQVLGS*STTPRA
Trigger: TGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTG...TTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGTTATGCCAACTGGCTaGCTCTGGTTCAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEVMPTG*LWFNCP
Trigger: AGGGCAGTTGAACCAGAGTCAGCCAGTTGGCATAAC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAAAATGAGCTGGGTGTaGTGGCACGCGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFKMSWV*WHAPVT
Trigger: GGTTACAGGCGCGTGCCATCACACCCAGCTCATTTT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp CCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PITICVTDFIAKPSICWLNPWNS*SLSGSR
Trigger: CCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATT...CAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp GCAAACCTCAACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: ANLNSGHSCVPENPSEEKGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...TTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCTGGACACTCCTGTGTaGCTGAGAATCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFELDTPV*LRIQVR
Trigger: CCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp TACTTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCCTGGACACTCCTGTGTaGCTGAGAATCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: YFVSITCPSTESRCSLFTLDTPV*LRIQVR
Trigger: CCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAG...GGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCAACCATGAGGGAGTaGAGTGGCACTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESTMRE*SGTTTA
Trigger: AGCTGTGGTAGTGCCACTGCACTCCCTCATGGTTGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCCCAGACATTCTCCTaGCTCAGCCTCTCAACTAGC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESQTFS*LSLSTS
Trigger: GCTAGTTGAGAGGCTGAGGCAGGAGAATGTCTGGGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCATCTTTTTCTTCAGTTaGAGTAATCCCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLIFFFS*SNPWNS
Trigger: GGAATTCCAGGGATTACTCCAACTGAAGAAAAAGAT...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGCAACCTCCGACTCTTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEATSDS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAAGAGTCGGAGGTTGC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGCCACCACACCCAGCTaGAAAATGTTTAAAATTTAT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLATTPS*KMFKIY
Trigger: ATAAATTTTAAACATTTTCCAGCTGGGTGTGGTGGC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCACAAAGTAGCTTTATaGATAGCTTGGCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLHKVAL*IAWLLN
Trigger: ATTCAGAAGCCAAGCTATCCATAAAGCTACTTTGTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATTCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: RILKYHTKGIKDEGLSRNSSGSE*LPDHLQ
Trigger: TTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGA...ATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp AGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATGGCCCATATCTCTCATaGAAATTAACCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RILKYHTKGIKDEGLSRNGPYLS*KLTRNS
Trigger: TGAGTTCCTGGTTAATTTGCATGAGAGATATGGGCC...ATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR GCA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTATTGGGATTGATATaGTGCTTCAGTACATCAACA +
Preference number: 4 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLLLGLI*CFSTST
Trigger: TGTTGATGTACTGAAGCAGCATATCAATCCCAATAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR GCA 90 bp AAAGCTTTAGGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACCATTTTGCAAAACCAAGCATATaGTGGCTGAGGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: KALGGGQSYSSENQSHHFAKPSI*WLRGTC
Trigger: GCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGC...AAAATGGTGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGGTGTGAGCCACTGTaGCCGGCCATGCTTATGTTT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFRCEPL*PAMLMF
Trigger: AAACATAAGCATGGCCGGGCACAGTGGCTCACACCT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCTGGGCATGGTGGCATaGATATGTAGTCCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFELGMVA*ICSPSY
Trigger: ATAGCTGGGACTACATATGCATGCCACCATGCCCAG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTATGATCATGGCTCACTaGAACCTCTACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFMIMAH*NLYLLG
Trigger: GCCCAGGAGGTAGAGGTTGCAGTGAGCCATGATCAT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTCACCTAGGCTGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSPRLE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCAGCCTAGGTGA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATTCGCGAAGTCCAACATaGTTCTGCCGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLIIFKCTTHYHLCNRLHSRSPT*FCRPGS
Trigger: GCTCCCTGGGCGGCAGAACCATGTTGGACTTCGCGA...ATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp AGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAAACTTGTGTGGAGATaGCCAAGTATTAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: RILKYHTKGIKDEGLSRNKLVWR*PSIRIL
Trigger: CAGGATCCTAATACTTGGCCATCTCCACACAAGTTT...ATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGCCTTCAGAACAGCTaGGACTACAGGTGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESLQNS*DYRCVS
Trigger: TGACACACACCTGTAGTCCCAGCTGTTCTGAAGGCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGCCTTGACCTCTCCTaGTCTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSLDLS*SQVILP
Trigger: TGGGAGGATCACTTGAGACCAGGAGAGGTCAAGGCT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGCAATGGTGCAATCTTaGCTCACCACAACCTTCCCC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFAMVQS*LTTTFP
Trigger: GGGGAAGGTTGTGGTGAGCCAAGATTGCACCATTGC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAACAGCTGGGCATGGTaGCATGCATATGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFENSWAW*HAYVVP
Trigger: TGGGACTACATATGCATGCCACCATGCCCAGCTGTT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGTTATACGCCCACTTTaGACTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEVIRPL*TPKVLG
Trigger: TCCCAGCACTTTGGGAGTCCAAAGTGGGCGTATAAC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGCCTCTCAACTAGCTaGGATTACATTCGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSLSTS*DYIRPP
Trigger: AGGCGGGCGAATGTAATCCCAGCTAGTTGAGAGGCT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCCAATAAGCCTGACTTaGCCTCTCCAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEPISLT*PLQVLG
Trigger: TCCCAACACTTGGAGAGGCCAAGTCAGGCTTATTGG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCAGCAGCGCCTCAGCCTaGCCCAATTTAAGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LARENIILSSRICWSLRFSSASA*PNLRHS
Trigger: GCTATGCCTTAAATTGGGCCAGGCTGAGGCGCTGCT...GAACCTTAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR TCA 90 bp GTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGAAGCGAATGACTTCCTaGTCATCTTCAAATGTACTA +
Preference number: 4 (lower is better)
Translates to: VTDFIAKPSICWLRGTCWKRMTS*SSSNVL
Trigger: TAGTACATTTGAAGATGATCAGGAAGTCATTCGCTT...CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp ATCTGGATCAAACTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACGACCAAACTGTGCCATaGTTCTTCTGGAAGCGAATG +
Preference number: 4 (lower is better)
Translates to: IWIKLVWRWPSIRILKYHDQTVP*FFWKRM
Trigger: CATTCGCTTCCAGAAGAATCATGGCACAGTTTGGTC...GTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAGTTTGATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp GCAAACCTCAACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAACATGCTGACAATATCTaGGCTGCTCAATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ANLNSGHSCVPENPSEEKHADNI*AAQFSL
Trigger: CAGAGAAAATTGAGCAGCTCAGATATTGTCAGCATG...TTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTTGAGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp CATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGCATGAGGGTGTGCCATaGTTCTTCTGGAAGCGAATG +
Preference number: 4 (lower is better)
Translates to: HYHLCNRLHSKTKHMLAEHEGVP*FFWKRM
Trigger: CATTCGCTTCCAGAAGAATCATGGCACACCCTCATG...CTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428265.5
CDS-3UTR GCA 90 bp TATCTGAGCTGCTCAATTTTCTCTGGAGTAACAGGACCATTTCCAAAAACTTGGAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: YLSCSIFSGVTGPFPKTWNPWNS*SLSGSR
Trigger: CCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATT...CCAAGTTTTTGGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCAGCTCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTTGTGGTCACCATATATaGAAACCTCAACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SIRILKYHTKGIKDEGLSCGHHI*KPQLWT
Trigger: TGTCCAGAGTTGAGGTTTGCATATATGGTGACCACA...AGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCTAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp TTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATGCTGGAGTGCAGGGGTaGAATCTCGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FLIIFKCTTHYHLCNRLHAGVQG*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGC...ATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp ATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCCTTGTACTAAGGAGAGGGTCTCCCAATGTTaGCTGGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: IILSSRICWSLRFPCTKERVSQC*LGWSQT
Trigger: AGTTTGAGACCAGCCCAGGCAACATTGGGAGACCCT...CTCCTTAGTACAAGGGAACCTTAATGACCAACAGATCCTAGAAGACAGTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGGCATGAGTCACTGTaGCCGGCCTACATTAGAATC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFRHESL*PAYIRI
Trigger: GATTCTAATGTAGGCCGGGCACAGTGACTCATGCCT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGGGATTACAGGCATGTaGCCCAAAGGCCAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFGITGM*PKGQLS
Trigger: ACTTAACTGGCCTTTGGGGCACATGCCTGTAATCCC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTTTCCTGCAGCTTGTCTaGAAGCCGGATAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: NSGHSCVPENPSEEKVFIFLQLV*KPDRGR
Trigger: TCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAA...AATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCAAACCAAGCATATGCTaGCTGAGGGGCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SNVLPITICVTDFIAKPSKPSIC*LRGTCW
Trigger: CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTT...GCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAAGCTGGGCAGAAACTaGAGTCAGTTTGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFKLGRN*SQFGSS
Trigger: CGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTTGGATCAAACTTGTGTaGAGATGGCCAAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: SIRILKYHTKGIKDEGLSWIKLV*RWPSIR
Trigger: CCTAATACTTGGCCATCTCCACACAAGTTTGATCCA...AGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCTAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGGCAGTTATGCCAACTaGCTGACTCTGGTTCAACTG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFGSYAN*LTLVQL
Trigger: CAGTTGAACCAGAGTCAGCCAGTTGGCATAACTGCC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAAAATTAGCTGGGGGTaGTTGGCGTGCGACTGTAGT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFKISWG*LACDCS
Trigger: ACTACAGTCGCACGCCAACCACCCCCAGCTAATTTT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTATCACAAAGCACATGCTaGCAATATCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SITCPSTESRCSLFTNTLSQSTC*QYLSCS
Trigger: TGAGCAGCTCAGATATTGTCAGCATGTGCTTTGTGA...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCAAGTATTAGGATCCTaGAGTACCACACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFQVLGS*STTPRA
Trigger: TGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TCTTCTGAAAGCTTTAGGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACAAGTATTAGGATCCTaGAGTACCACACCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSESFRRRAKLLFRESVTQVLGS*STTPRA
Trigger: TGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTG...TGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGCTTTCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTAATCTCTTTGAGACAGTaGTCCAAGCTTCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SITCPSTESRCSLFTNTLISLRQ*SKLLPL
Trigger: CAAGGGAAGAAGCTTGGATCACTGTCTCAAAGAGAT...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTGTTCTTGAACTCCTaGCCTCAAGTTATACGCCCA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLFLNS*PQVIRP
Trigger: TGGGCGTATAACTTGAGGTCAGGAGTTCAAGAACAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp CTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCAGACTCCAGTTGCATaGGGGTGTGCCATGATTCTT +
Preference number: 4 (lower is better)
Translates to: LARENIILSSRICWSLRFQTPVA*GCAMIL
Trigger: AAGAATCATGGCACACCCTCATGCAACTGGAGTCTG...GAACCTTAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000449301.5
CDS-3UTR GCA 90 bp GACTTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCTGGACACTCCTGTGTaGCTGAGAATCCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DFLIIFKCTTHYHLCNRLLDTPV*LRIQVR
Trigger: CCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAG...AAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp ATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCCTTGTACTAAGGAGACGCATGAGCCACTGTaGCCTGCCCCAATATTTTGT +
Preference number: 4 (lower is better)
Translates to: IILSSRICWSLRFPCTKETHEPL*PAPIFC
Trigger: ACAAAATATTGGGGCAGGGCACAGTGGCTCATGCGT...CTCCTTAGTACAAGGGAACCTTAATGACCAACAGATCCTAGAAGACAGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTTCAAGCAATTTTCCTaGCTCAGCGTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEFKQFS*LSVSSS
Trigger: GCTACTTGAGACGCTGAGGCAGGAAAATTGCTTGAA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp CTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCTTCCTGCAGCTTGTCTaGAAGCCGGATAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LARENIILSSRICWSLRFFLQLV*KPDRGR
Trigger: TCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAA...GAACCTTAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428265.5
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp AGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATATCTTTTTCTTCAGTTaGAGTAATCCCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RILKYHTKGIKDEGLSRNIFFFS*SNPWNS
Trigger: GGAATTCCAGGGATTACTCCAACTGAAGAAAAAGAT...ATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR CCA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTACACGTGCTGGGTCTCTaGGTAGGAGAGCCATTTATC +
Preference number: 4 (lower is better)
Translates to: MQLARENIILSSRICWSLHVLGL*VGEPFI
Trigger: GATAAATGGCTCTCCTACCCAGAGACCCAGCACGTG...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428265.5
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TGCTCAATTTTCTCTGGAGTAACAGGACCATTTCCAAAAACTTGGTTTATCTCTAAACCAAGCATATGCTaGCTGAGGGGCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSIFSGVTGPFPKTWFISKPSIC*LRGTCW
Trigger: CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTT...AGAGATAAACCAAGTTTTTGGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp CTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACACCAAGGGCATATCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVWRWPSIRILKYHTKGISSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...TATGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp AACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTATCTCTTTGAGACAGTaGTCCAAGCTTCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: NSGHSCVPENPSEEKVFIISLRQ*SKLLPL
Trigger: CAAGGGAAGAAGCTTGGATCACTGTCTCAAAGAGAT...AATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR TCA 90 bp CTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACACCAAGGGCATACATATTCAACAAACATaGTTCCCCAACTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LVWRWPSIRILKYHTKGIHIQQT*FPNFCK
Trigger: TTTGCAGAAGTTGGGGAATCATGTTTGTTGAATATG...TATGCCCTTGGTGTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp TTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: FLIIFKCTTHYHLCNRLHNPWNS*SLSGSR
Trigger: CCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATT...ATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAATGTGGTCACCATATATaGAAACCTCAACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKCGHHI*KPQLWT
Trigger: TGTCCAGAGTTGAGGTTTGCATATATGGTGACCACA...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp GTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACATCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACA +
Preference number: 4 (lower is better)
Translates to: VSITCPSTESRCSLFTNTSTESR*SLFTNT
Trigger: TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGA...TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp ACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTAAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TLDTPVCLRIQVRKKFSLSWSNP*NSCSLS
Trigger: AGACAAGCTGCAGGAATTCCAGGGATTACTCCAACT...TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAAACTGGAGTCAGTTTaGCAGTTCGAACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEKLESV*QFEQFH
Trigger: GTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTAAAACTGGAGTCAGTTTaGCAGTTCGAACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SITCPSTESRCSLFTNTLKLESV*QFEQFH
Trigger: GTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTT...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp CTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTAGGAATAATAAAAAACTGGAGTCAGTTTaGCAGTTCGAACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LKYHTKGIKDEGLSRNNKKLESV*QFEQFH
Trigger: GTGAAACTGTTCGAACTGCCAAACTGACTCCAGTTT...TTTATTATTCCTAGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp AAAGCTTTAGGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACCATTTTGGGGTTTCATCATGTTaGCCAGACTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KALGGGQSYSSENQSHHFGVSSC*PDWSQT
Trigger: AGTTTGAGACCAGTCTGGCCAACATGATGAAACCCC...AAAATGGTGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp TCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCAGGGTTTCATCATGTTaGCCAGGCTGGTCGCAAACT +
Preference number: 4 (lower is better)
Translates to: SNVLPITICVTDFIAKPSRVSSC*PGWSQT
Trigger: AGTTTGCGACCAGCCTGGCCAACATGATGAAACCCT...GCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCAATGCACTCCAGCTTaGTCAACAAAGCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFQCTPA*STKQDC
Trigger: ACAGTCTTGCTTTGTTGACCAAGCTGGAGTGCATTG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTACTGGTTGCCTTTTTaGGGACAGGTACTTTATGAC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEYWLPF*GQVLYD
Trigger: GTCATAAAGTACCTGTCCCCAAAAAGGCAACCAGTA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTGCCACCACCAGATTaGTACCTTAATAATGACTTC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLPPPD*YLNNDF
Trigger: GAAGTCATTATTAAGGTATCAATCTGGTGGTGGCAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp ACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTCTGCCACCACCAGATTaGTACCTTAATAATGACTTC +
Preference number: 4 (lower is better)
Translates to: THYHLCNRLHSKTKHMLALPPPD*YLNNDF
Trigger: GAAGTCATTATTAAGGTATCAATCTGGTGGTGGCAG...AGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCATGCTGACAATATCTaGGCTGCTCAATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFHADNI*AAQFSL
Trigger: CAGAGAAAATTGAGCAGCTCAGATATTGTCAGCATG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp ACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTCATGCTGACAATATCTaGGCTGCTCAATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: THYHLCNRLHSKTKHMLAHADNI*AAQFSL
Trigger: CAGAGAAAATTGAGCAGCTCAGATATTGTCAGCATG...AGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGGCCCATATCTCTCATaGAAATTAACCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFGPYLS*KLTRNS
Trigger: TGAGTTCCTGGTTAATTTGCATGAGAGATATGGGCC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTGGAGTCAGTCTCAGACCAAACTGTaGCATGATTCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSVNFSFNILKLGRNWSQSQTKL*HDSSGS
Trigger: GCTTCCAGAAGAATCATGGCACAGTTTGGTCTGAGA...CTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTGTGGTCACCATATATaGAAACCTCAACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFCGHHI*KPQLWT
Trigger: TGTCCAGAGTTGAGGTTTGCATATATGGTGACCACA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTATTTATTGGCAGTTATaGCAACTGGCTGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFIYWQL*QLADSG
Trigger: ACCAGAGTCAGCCAGTTGGCATAACTGCCAATAAAT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTGGAGTCAGAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KSVNFSFNILKLGRNWSQSWSNP*NSCSLS
Trigger: AGACAAGCTGCAGGAATTCCAGGGATTACTCCAACT...CTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp CCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGTCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PITICVTDFIAKPSICWLSSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...CAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp TACTTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCTCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: YFVSITCPSTESRCSLFTSSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...GGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp ACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTACTGCTCAATTTTCTCTaGAGTAACAGGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: TLDTPVCLRIQVRKKFSLLLNFL*SNRTIS
Trigger: GGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCAG...TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp ATCTGGATCAAACTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACATCATCAAACCGATCTaGATCAAACTTGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IWIKLVWRWPSIRILKYHIIKPI*IKLVWR
Trigger: TCTCCACACAAGTTTGATCCAGATCGGTTTGATGAT...GTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAGTTTGATCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp ACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTTCCGTTTTCTTCAGTTaGAGTAATCCCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: THYHLCNRLHSKTKHMLASVFFS*SNPWNS
Trigger: GGAATTCCAGGGATTACTCCAACTGAAGAAAACGGA...AGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp ATCTGGATCAAACTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACATGTCTTATTGGGATTaGTATGCTGCTTCAGTACAT +
Preference number: 4 (lower is better)
Translates to: IWIKLVWRWPSIRILKYHMSYWD*YAASVH
Trigger: ATGTACTGAAGCAGCATATCAATCCCAATAAGACAT...GTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAGTTTGATCCAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR TCA 90 bp TCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCCAGACTCCAGTTGCATaGGGGCATCTTCATATTGTT +
Preference number: 4 (lower is better)
Translates to: SNVLPITICVTDFIAKPSQTPVA*GHLHIV
Trigger: AACAATATGAAGATGCCCTCATGCAACTGGAGTCTG...GCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCTCACAAAGCACATGCTaGCAATATCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SNVLPITICVTDFIAKPSSQSTC*QYLSCS
Trigger: TGAGCAGCTCAGATATTGTCAGCATGTGCTTTGTGA...GCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCATCTCATCTGATCTaGCACTTGGTTTACATATCA +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESSHLI*HLVYIS
Trigger: TGATATGTAAACCAAGTGTCAGATCAGATGAGATGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR TCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTTGTTAGCACAAGTTTaGGAGAGCTCTTTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFELLAQV*ESSLVH
Trigger: ATGAACTAAAGAGCTCTCTCAAACTTGTGCTAACAA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTTGGGATTGATATGCTaGTTCAGTACATCAACAGTG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLGLIC*FSTSTV
Trigger: CACTGTTGATGTACTGAAGCAGCATATCAATCCCAA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp ATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCGGTTTTCACTCACACTaGCACCACCAGATTGATACC +
Preference number: 4 (lower is better)
Translates to: IFKCTTHYHLCNRLHSKTGFHSH*HHQIDT
Trigger: GGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACC...GGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAAAACAGACTCCAGTTaGATGAGGGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFKTDSS*MRASSY
Trigger: ATATGAAGATGCCCTCATGCAACTGGAGTCTGTTTT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp GGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACCATTTTCATACAATTTCCACAGAAAGTAGGTaGAGTCTCTTCACCAATACA +
Preference number: 4 (lower is better)
Translates to: GGGQSYSSENQSHHFHTISTESR*SLFTNT
Trigger: TGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGA...AATTGTATGAAAATGGTGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR GCA 90 bp GACTTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTAAAACAGACTCCAGTTaGATGAGGGTGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: DFLIIFKCTTHYHLCNRLKTDSS*MRVCHD
Trigger: ATCATGGCACACCCTCATGCAACTGGAGTCTGTTTT...AAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428265.5
CDS-3UTR GCA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAAAACAGACTCCAGTTaGATGAGGGTGTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: MQLARENIILSSRICWSLKTDSS*MRVCHD
Trigger: ATCATGGCACACCCTCATGCAACTGGAGTCTGTTTT...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000449301.5
CDS-3UTR CCA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGATCTTTTTCTTCAGTTaGAGTAATCCCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEIFFFS*SNPWNS
Trigger: GGAATTCCAGGGATTACTCCAACTGAAGAAAAAGAT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTCTTCTAGGATCTGTTaGTCATTAAGGTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSSRIC*SLRFPC
Trigger: ACAAGGGAACCTTAATGACCAACAGATCCTAGAAGA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp AAAGCTTTAGGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACCATTTTAAACTTGTGTGGAGATaGCCAAGTATTAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: KALGGGQSYSSENQSHHFKLVWR*PSIRIL
Trigger: CAGGATCCTAATACTTGGCCATCTCCACACAAGTTT...AAAATGGTGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp AAAGCTTTAGGAGGAGGGCAAAGTTACTCTTCAGAGAATCAGTCACACCATTTTTGGATCAAACTTGTGTaGAGATGGCCAAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: KALGGGQSYSSENQSHHFWIKLV*RWPSIR
Trigger: CCTAATACTTGGCCATCTCCACACAAGTTTGATCCA...AAAATGGTGTGACTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAGCTCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SNVLPITICVTDFIAKPSSSGSE*LPDHLQ
Trigger: TTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGA...GCTTGGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTATCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: MQLARENIILSSRICWSLSSGSE*LPDHLQ
Trigger: TTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGA...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428265.5
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTTAACCAGGAACTCATaGAAACTTCCACTATTCACA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLTRNS*KLPLFT
Trigger: TGTGAATAGTGGAAGTTTGCATGAGTTCCTGGTTAA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTGGAGTCAGTTGGGATTGATATGCTaGTTCAGTACATCAACAGTG +
Preference number: 4 (lower is better)
Translates to: KSVNFSFNILKLGRNWSQLGLIC*FSTSTV
Trigger: CACTGTTGATGTACTGAAGCAGCATATCAATCCCAA...CTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR GCA 90 bp AAATCGGTCAATTTTTCCTTCAATATCTTGAAGCTGGGCAGAAACTGGAGTCAGCCAGGTACACAATTTTaGAGTTATTATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: KSVNFSFNILKLGRNWSQPGTQF*SYYATG
Trigger: GCCAGTTGCATAATAACTGCAAAATTGTGTACCTGG...CTGACTCCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAAATTGACCGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGGTAACAAAGGAAGATaGTCTATACACACAAAACCA +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFGNKGR*SIHTKP
Trigger: TGGTTTTGTGTGTATAGAGCATCTTCCTTTGTTACC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR GCA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGTGAAAAGTAACTCATaGTGCAATGAACGTACTATG +
Preference number: 4 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFVKSNS*CNERTM
Trigger: CATAGTACGTTCATTGCAGCATGAGTTACTTTTCAC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp ATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: IFKCTTHYHLCNRLHSKTSWSNP*NSCSLS
Trigger: AGACAAGCTGCAGGAATTCCAGGGATTACTCCAACT...GGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CCA 90 bp CTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCATAATGACTTCAGCATaGTTTCAAAAGGGTCCGATG +
Preference number: 4 (lower is better)
Translates to: LARENIILSSRICWSLRFIMTSA*FQKGPM
Trigger: CATCGGACCCTTTTGAAACCATGCTGAAGTCATTAT...GAACCTTAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR CCA 90 bp ACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTAATAATGACTTCAGCATaGTTTCAAAAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: TLDTPVCLRIQVRKKFSLIMTSA*FQKGPF
Trigger: AAACGGACCCTTTTGAAACCATGCTGAAGTCATTAT...TAATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431118.5
3UTR CAA 72 bp TGCCAACTGGCTGACTCTGGTTCAACTGCCCTATTTTaGCTTTCATCATTGTTTATCATATCTCACTTGCTT +
Preference number: 4 (lower is better)
Translates to: CQLADSGSTALF*LSSLFIISHLL
Trigger: AAGCAAGTGAGATATGATAAACAATGATGAAAGCAAAAATAGGGCAGTTGAACCAGAGTCAGCCAGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CCA 90 bp TGCTCAATTTTCTCTGGAGTAACAGGACCATTTCCAAAAACTTGGTTTATCTCTCTGCTCAATTTTCTCTaGAGTAACAGGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: CSIFSGVTGPFPKTWFISLLNFL*SNRTIS
Trigger: GGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCAG...AGAGATAAACCAAGTTTTTGGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR GCA 90 bp CTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCTTATTGGGATTGATATaGTGCTTCAGTACATCAACA +
Preference number: 4 (lower is better)
Translates to: LARENIILSSRICWSLRFLLGLI*CFSTST
Trigger: TGTTGATGTACTGAAGCAGCATATCAATCCCAATAA...GAACCTTAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR GCA 90 bp ATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCAAAACAGACTCCAGTTaGATGAGGGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: IFKCTTHYHLCNRLHSKTKTDSS*MRASSY
Trigger: ATATGAAGATGCCCTCATGCAACTGGAGTCTGTTTT...GGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CCA 90 bp TTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATATCATCAAACCGATCTaGATCAAACTTGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLIIFKCTTHYHLCNRLHIIKPI*IKLVWR
Trigger: TCTCCACACAAGTTTGATCCAGATCGGTTTGATGAT...ATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR TCA 90 bp TTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAAGCGAATGACTTCCTaGTCATCTTCAAATGTACTA +
Preference number: 4 (lower is better)
Translates to: FLIIFKCTTHYHLCNRLHKRMTS*SSSNVL
Trigger: TAGTACATTTGAAGATGATCAGGAAGTCATTCGCTT...ATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR TCA 90 bp TGCTCAATTTTCTCTGGAGTAACAGGACCATTTCCAAAAACTTGGTTTATCTCTAAGCGAATGACTTCCTaGTCATCTTCAAATGTACTA +
Preference number: 4 (lower is better)
Translates to: CSIFSGVTGPFPKTWFISKRMTS*SSSNVL
Trigger: TAGTACATTTGAAGATGATCAGGAAGTCATTCGCTT...AGAGATAAACCAAGTTTTTGGAAATGGTCCTGTTACTCCAGAGAAAATTGAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CCA 90 bp ATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCATAATGACTTCAGCATaGTTTCAAAAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: IFKCTTHYHLCNRLHSKTIMTSA*FQKGPF
Trigger: AAACGGACCCTTTTGAAACCATGCTGAAGTCATTAT...GGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATGCAATCTCAACACTTaGGGAGGCCCAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLCNLNT*GGPGGR
Trigger: CCTCCCACCTGGGCCTCCCAAAGTGTTGAGATTGCA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAGGGTTTCATCCTGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQGFIL*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACAGGATGAAACCCTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp CTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGCAGGGTTTCATCCTGTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LHSKTKHMLAEGHVLGLWQGFIL*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAACAGGATGAAACCCTG...CCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACTTTATCACTCAGGTTaGGCTGAGGGCAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLLYHSG*AEGSGV
Trigger: CACACCACTGCCCTCAGCCAAACCTGAGTGATAAAG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAGGGTTTCATCATGTaGGCCAGGCTGGTCGCAAAC +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQGFIM*ARLVAN
Trigger: GTTTGCGACCAGCCTGGCCAACATGATGAAACCCTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCAGATCACTGCAGCCTaGACCTCTCCTGGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLQITAA*TSPGLK
Trigger: CTTGAGACCAGGAGAGGTCAAGGCTGCAGTGATCTG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGGAATTCCTGCAGCTaGTCTGGAAGCCGGATAGAG +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLWNSCS*SGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGCAACCTCCGACTCTaGGGTTCAAGCGATTCTCCT +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLCNLRL*GSSDSP
Trigger: AGGAGAATCGCTTGAACCCAAGAGTCGGAGGTTGCA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTGGGGTTTCATCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLWGFIM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGATGAAACCCCA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTACCACGCCCGCTACTTTaGGTATTTTTAGTAGAGATG +
Preference number: 5 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLPRPLL*VFLVEM
Trigger: CATCTCTACTAAAAATACCAAAAGTAGCGGGCGTGG...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp GTAACAGACTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGTGGAATTCCTGCAGCTaGTCTGGAAGCCGGATAGAG +
Preference number: 5 (lower is better)
Translates to: VTDFIAKPSICWLRGTCWWNSCS*SGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCA...CCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAGTCTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGGGTCCGATGTCTTATaGGGATTGATATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLGSDVL*GLICCF
Trigger: GAAGCAGCATATCAATCCCAATAAGACATCGGACCC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp AAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGGTAGGAGAGCCATTTGAAACTGGAGTCAGTTaGGCAGTTCGAACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: KHMLAEGHVLGLWVGEPFETGVS*AVRTVS
Trigger: TGAAACTGTTCGAACTGCCAAACTGACTCCAGTTTC...AAATGGCTCTCCTACCCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp GGGGCACGTGCTGGGTCTCTGGGTAGGAGAGCCATTTATCTAATAATTCTTCTGTGGAATTCCTGCAGCTaGTCTGGAAGCCGGATAGAG +
Preference number: 5 (lower is better)
Translates to: GARAGSLGRRAIYLIILLWNSCS*SGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCA...CAGAAGAATTATTAGATAAATGGCTCTCCTACCCAGAGACCCAGCACGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGAAACTGGAGTCAGTTaGGCAGTTCGAACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLETGVS*AVRTVS
Trigger: TGAAACTGTTCGAACTGCCAAACTGACTCCAGTTTC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCCCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTTTTCCTTCAATATCTaGAAGCTGGGCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLFSFNI*KLGRNW
Trigger: CCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp CTTCATAGCAAAACCAAGCATATGCTGGCTGAGGGGCACGTGCTGGGTCTCTGGTTTTCCTTCAATATCTaGAAGCTGGGCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: LHSKTKHMLAEGHVLGLWFSFNI*KLGRNW
Trigger: CCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAA...CCAGAGACCCAGCACGTGCCCCTCAGCCAGCATATGCTTGGTTTTGCTATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCTCCAAGCTTCTTCCCTaGATGATGTTACCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLSKLLP*MMLPVH
Trigger: ATGAACTGGTAACATCATCAAGGGAAGAAGCTTGGA...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp CCAGCTATTCTAGAGGCTGAGGTGAGATCGCTGGAGCCCAGGAGGTGGAGGCTATTTGTTAGCACAAGTTaGAGAGAGCTCTTTAGTTCA +
Preference number: 5 (lower is better)
Translates to: PAILEAEVRSLEPRRWRLFVSTS*RELFSS
Trigger: TGAACTAAAGAGCTCTCTCAAACTTGTGCTAACAAA...TAGCCTCCACCTCCTGGGCTCCAGCGATCTCACCTCAGCCTCTAGAATAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS CCA 90 bp AGCATGGTTTCAAAAGGGTCCGTTTTCTTCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCTGGAAGCCGGATAGAGGTAGAGCAC +
Preference number: 5 (lower is better)
Translates to: SMVSKGSVFFSWSNP*NSCSLSGSRIEVEH
Trigger: GTGCTCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAACGGACCCTTTTGAAACCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS-3UTR CAA 90 bp AAGATCTATTCCCAGTATCTAGAAAGCAAGCCAACGGGCCGGGCGCAGTGGCTCGATGTCTTATTGGGATaGATATGCTGCTTCAGTACA +
Preference number: 5 (lower is better)
Translates to: KIYSQYLESKPTGRAQWLDVLLG*ICCFST
Trigger: TGTACTGAAGCAGCATATCAATCCCAATAAGACATC...GAGCCACTGCGCCCGGCCCGTTGGCTTGCTTTCTAGATACTGGGAATAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356079.9
ENST00000613925.4
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCAAGCTTTTGCCACGTaGCCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEQAFAT*PRLVSN
Trigger: GTTTGAGACCAGCCTGGGCAACGTGGCAAAAGCTTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS GCA 90 bp AGCATGGTTTCAAAAGGGTCCGATGTCTTATTGGGATTGATATGCTaGTTCAGTACATCAACAGTGCCCAAACTAACCACGAGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: SMVSKGSDVLLGLIC*FSTSTVPKLTTRRL
Trigger: CAGGCGCCTCGTGGTTAGTTTGGGCACTGTTGATGTACTGAAGCAGCATATCAATCCCAATAAGACATCGGACCCTTTTGAAACCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTGGAATTCCTGCAGCTaGTCTGGAAGCCGGATAGAG +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEWNSCS*SGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTCTCTGGGAGGCTGAGTaGGGCAGATCACAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFLWEAE*GRSQGQ
Trigger: TTGACCTTGTGATCTGCCCAACTCAGCCTCCCAGAG...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTGCGGTTTCCCCATGTaGGCCAGGCTGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFCGFPM*ARLFLN
Trigger: GTTCAAGAACAGCCTGGCCAACATGGGGAAACCGCA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTTTGAGGGTTGTGCTTaGTCACCTAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEFEGCA*SPRLEC
Trigger: GCACTCCAGCCTAGGTGACAAAGCACAACCCTCAAA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGGCAGGAGAATTACTaGAACCTGAGAGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFERQENY*NLRGGG
Trigger: ACCTCCCCCTCTCAGGTTCAAGTAATTCTCCTGCCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AGTATTAGGATCCTGAAGTACCACACCAAGGGCATAAAGGACGAGGGTCTCTCTGAAACTGGAGTCAGTTaGGCAGTTCGAACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SIRILKYHTKGIKDEGLSETGVS*AVRTVS
Trigger: TGAAACTGTTCGAACTGCCAAACTGACTCCAGTTTC...AGAGAGACCCTCGTCCTTTATGCCCTTGGTGTGGTACTTCAGGATCCTAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTACAGGGTCTCCCAATGTaGCCTGGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MQLARENIILSSRICWSLQGLPM*PGLVSN
Trigger: GTTTGAGACCAGCCCAGGCAACATTGGGAGACCCTG...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTATAGAAACAAGCTTTaGCCACGTTGCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEYRNKL*PRCPGW
Trigger: CCAGCCTGGGCAACGTGGCAAAAGCTTGTTTCTATA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTGGAGTTTCACCACGTaGGCCAGGCTGATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFWSFTT*ARLISN
Trigger: GTTTGAGATCAGCCTGGCCAACGTGGTGAAACTCCA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTAGTTATACGCCCACTTaGGACTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFSYTPT*DSQSAG
Trigger: CCCAGCACTTTGGGAGTCCAAAGTGGGCGTATAACT...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp ATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCCTTGTACTAAGGAGTGGAATTCCTGCAGCTaGTCTGGAAGCCGGATAGAG +
Preference number: 5 (lower is better)
Translates to: IILSSRICWSLRFPCTKEWNSCS*SGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCA...CTCCTTAGTACAAGGGAACCTTAATGACCAACAGATCCTAGAAGACAGTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000428265.5
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp ATCTGGATCAAACTTGTGTGGAGATGGCCAAGTATTAGGATCCTGAAGTACCACGGGTCCGATGTCTTATaGGGATTGATATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IWIKLVWRWPSIRILKYHGSDVL*GLICCF
Trigger: GAAGCAGCATATCAATCCCAATAAGACATCGGACCC...GTGGTACTTCAGGATCCTAATACTTGGCCATCTCCACACAAGTTTGATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTGGGGTTTCACCATGTaGGCCAGGATGGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFWGFTM*ARMVSN
Trigger: ATTTGAGACCATCCTGGCCAACATGGTGAAACCCCA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTTGCAGTTTCGCCATGTaGCCTAGGCTAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFCSFAM*PRLVSN
Trigger: GTTTGAGACTAGCCTAGGCAACATGGCGAAACTGCA...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS CCA 90 bp AATATCTGGAAGATTACCATCTTTTTCTTCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCTGGAAGCCGGATAGAGGTAGAGCAC +
Preference number: 5 (lower is better)
Translates to: NIWKITIFFFSWSNP*NSCSLSGSRIEVEH
Trigger: GTGCTCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAAAGATGGTAATCTTCCAGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS-3UTR CAA 90 bp ATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTCATAGCAAAACCCAGGGTTTCATCATGTaGGCCAGGCTGGTCGCAAAC +
Preference number: 5 (lower is better)
Translates to: IFKCTTHYHLCNRLHSKTQGFIM*ARLVAN
Trigger: GTTTGCGACCAGCCTGGCCAACATGATGAAACCCTG...GGTTTTGCTATGAAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp TACTTTGTTTCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCTTTTCCTTCAATATCTaGAAGCTGGGCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: YFVSITCPSTESRCSLFTFSFNI*KLGRNW
Trigger: CCAGTTTCTGCCCAGCTTCAAGATATTGAAGGAAAA...GGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGAAACAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTCCAAGCTTCTTCCCTaGATGATGTTACCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFESKLLP*MMLPVH
Trigger: ATGAACTGGTAACATCATCAAGGGAAGAAGCTTGGA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTATCCAAGCTTCTTCCCTaGATGATGTTACCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: SITCPSTESRCSLFTNTLSKLLP*MMLPVH
Trigger: ATGAACTGGTAACATCATCAAGGGAAGAAGCTTGGA...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp ATGCAACTGGCCAGAGAAAATATCATACTGTCTTCTAGGATCTGTTGGTCATTATGGGGTTTCATCATGTaGGCCAGACTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MQLARENIILSSRICWSLWGFIM*ARLVSN
Trigger: GTTTGAGACCAGTCTGGCCAACATGATGAAACCCCA...TAATGACCAACAGATCCTAGAAGACAGTATGATATTTTCTCTGGCCAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS-3UTR CAA 90 bp TCAATAACCTGTCCCTCCACAGAAAGTAGGTGCAGTCTCTTCACCAATACACTAGATGTCTTATTGGGATaGATATGCTGCTTCAGTACA +
Preference number: 5 (lower is better)
Translates to: SITCPSTESRCSLFTNTLDVLLG*ICCFST
Trigger: TGTACTGAAGCAGCATATCAATCCCAATAAGACATC...TAGTGTATTGGTGAAGAGACTGCACCTACTTTCTGTGGAGGGACAGGTTATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449301.5
CDS-3UTR CAA 90 bp AACTCTGGACACTCCTGTGTGCCTGAGAATCCAAGTGAGGAAAAAGTTTTCATTCCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 5 (lower is better)
Translates to: NSGHSCVPENPSEEKVFIPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...AATGAAAACTTTTTCCTCACTTGGATTCTCAGGCACACAGGAGTGTCCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGCACCATTTAAACCTGTaGATTGAGCCCTCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFEHHLNL*IEPSLN
Trigger: ATTTAAGGAGGGCTCAATCAACAGGTTTAAATGGTG...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS TCA 90 bp TCATACTGTCTTCTAGGATTGTGCCATGATTCTTCTGGAAGCGAATaGCTTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SYCLLGLCHDSSGSE*LPDHLQMYYPLPSV
Trigger: CACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAAGTCATTCGCTTCCAGAAGAATCATGGCACAATCCTAGAAGACAGTATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443941.1
ENST00000489360.5
CDS-3UTR CAA 90 bp AATAGTTGGGACTGCAGGTGGTGCCACCAAGGCTGGCTAAGTTTTTATATTTTTGATGTCTTATTGGGATaGATATGCTGCTTCAGTACA +
Preference number: 5 (lower is better)
Translates to: NSWDCRWCHQGWLSFYIFDVLLG*ICCFST
Trigger: TGTACTGAAGCAGCATATCAATCCCAATAAGACATC...AAAAATATAAAAACTTAGCCAGCCTTGGTGGCACCACCTGCAGTCCCAACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp ATCATACTGTCTTCTAGGATCTGTTGGTCATTAAGGTTCCCTTGTACTAAGGAGCCCAGGTACACAATTTaGCAGTTATTATGCAACTGG +
Preference number: 5 (lower is better)
Translates to: IILSSRICWSLRFPCTKEPRYTI*QLLCNW
Trigger: CCAGTTGCATAATAACTGCAAAATTGTGTACCTGGG...CTCCTTAGTACAAGGGAACCTTAATGACCAACAGATCCTAGAAGACAGTATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431118.5
ENST00000449301.5
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGAGAAATGTGTTTAGGTaGGTAGCATTCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFERNVFR*VAFFFL
Trigger: GAGGAAAAAGAATGCTACCAACCTAAACACATTTCT...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp TACATATCAATTGGCTACTCTAACCTTCTACCGCCAGTTTCCAACCCATTCGAGTGTAAACCAATTAAATaGGGAGTAGAACTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: YISIGYSNLLPPVSNPFECKPIK*GVELEE
Trigger: CTCTTCCAGTTCTACTCCCAATTTAATTGGTTTACA...CTCGAATGGGTTGGAAACTGGCGGTAGAAGGTTAGAGTAGCCAATTGATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356079.9
CDS-3UTR CAA 90 bp GACTTCCTGATCATCTTCAAATGTACTACCCATTACCATCTGTGTAACAGACTTTCCAAGCTTCTTCCCTaGATGATGTTACCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: DFLIIFKCTTHYHLCNRLSKLLP*MMLPVH
Trigger: ATGAACTGGTAACATCATCAAGGGAAGAAGCTTGGA...AAGTCTGTTACACAGATGGTAATGGGTAGTACATTTGAAGATGATCAGGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431118.5
CDS GCA 72 bp TCCGTTTTCTTCAGTTGGAGTAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGGATAGAGGTAGAGCAC +
Preference number: 6 (lower is better)
Translates to: SVFFSWSNPWNS*SLSGSRIEVEH
Trigger: GTGCTCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS CCA 72 bp TCAAAAGGGTCCGTTTTCTTCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCTGGAAGCCGGATAGAG +
Preference number: 6 (lower is better)
Translates to: SKGSVFFSWSNP*NSCSLSGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAACGGACCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5
CDS GCA 72 bp ATCTTTTTCTTCAGTTGGAGTAATCCCTGGAATTCCTaGAGCTTGTCTGGAAGCCGGATAGAGGTAGAGCAC +
Preference number: 6 (lower is better)
Translates to: IFFFSWSNPWNS*SLSGSRIEVEH
Trigger: GTGCTCTACCTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS CCA 72 bp CACCACCAGATTGATACCTTAATAATGACTTCAGCATaGTTTCAAAAGGGTCCGCGGATAGAGGTAGAGCAC +
Preference number: 6 (lower is better)
Translates to: HHQIDTLIMTSA*FQKGPRIEVEH
Trigger: GTGCTCTACCTCTATCCGCGGACCCTTTTGAAACCATGCTGAAGTCATTATTAAGGTATCAATCTGGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461371.5
ENST00000463131.5
ENST00000489360.5
CDS TCA 72 bp GCATGGTTTCAAAAGGGTCCGATGTCTTATTGGGATTaGTATGCTGCTTCAGTACATCAACAGTGCCCAAAC +
Preference number: 6 (lower is better)
Translates to: AWFQKGPMSYWD*YAASVHQQCPN
Trigger: GTTTGGGCACTGTTGATGTACTGAAGCAGCATATCAATCCCAATAAGACATCGGACCCTTTTGAAACCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS GCA 72 bp TCAAAAGGGTCCGATGTCTTATTGGGATTGATATGCTaGTTCAGTACATCAACAGTGCCCAAACTAACCACG +
Preference number: 6 (lower is better)
Translates to: SKGSDVLLGLIC*FSTSTVPKLTT
Trigger: CGTGGTTAGTTTGGGCACTGTTGATGTACTGAAGCAGCATATCAATCCCAATAAGACATCGGACCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS CCA 72 bp AAGATTACCATCTTTTTCTTCAGTTGGAGTAATCCCTaGAATTCCTGCAGCTTGTCTGGAAGCCGGATAGAG +
Preference number: 6 (lower is better)
Translates to: KITIFFFSWSNP*NSCSLSGSRIE
Trigger: CTCTATCCGGCTTCCAGACAAGCTGCAGGAATTCCAGGGATTACTCCAACTGAAGAAAAAGATGGTAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS GCA 72 bp GTTTCAAAAGGGTCCGATGTCTTATTGGGATTGATATaGTGCTTCAGTACATCAACAGTGCCCAAACTAACC +
Preference number: 6 (lower is better)
Translates to: VSKGSDVLLGLI*CFSTSTVPKLT
Trigger: GGTTAGTTTGGGCACTGTTGATGTACTGAAGCAGCATATCAATCCCAATAAGACATCGGACCCTTTTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS CAA 72 bp AGCATGGTTTCAAAAGGGTCCGATGTCTTATTGGGATaGATATGCTGCTTCAGTACATCAACAGTGCCCAAA +
Preference number: 6 (lower is better)
Translates to: SMVSKGSDVLLG*ICCFSTSTVPK
Trigger: TTTGGGCACTGTTGATGTACTGAAGCAGCATATCAATCCCAATAAGACATCGGACCCTTTTGAAACCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356079.9
ENST00000429815.6
ENST00000443941.1
ENST00000449301.5
ENST00000613925.4
CDS TCA 72 bp CTCATGTGGTTTTCACTCACACTGCCACCACCAGATTaGTACCTTAATAATGACTTCAGCATGGTTTCAAAA +
Preference number: 6 (lower is better)
Translates to: LMWFSLTLPPPD*YLNNDFSMVSK
Trigger: TTTTGAAACCATGCTGAAGTCATTATTAAGGTATCAATCTGGTGGTGGCAGTGTGAGTGAAAACCACATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356079.9
ENST00000428265.5
ENST00000429815.6
ENST00000431118.5
ENST00000443941.1
ENST00000449301.5
ENST00000461371.5
ENST00000463131.5
ENST00000489360.5
ENST00000613925.4
CDS CCA 72 bp CACCACCAGATTGATACCTTAATAATGACTTCAGCATaGTTTCAAAAGGGTCCGTTTTCTTCAGTTGGAGTA +
Preference number: 6 (lower is better)
Translates to: HHQIDTLIMTSA*FQKGPFSSVGV
Trigger: TACTCCAACTGAAGAAAACGGACCCTTTTGAAACCATGCTGAAGTCATTATTAAGGTATCAATCTGGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428265.5
ENST00000431118.5