RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP1B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138061

Ensembl transcript IDs: ENST00000490576.1, ENST00000491456.1, ENST00000492443.1, ENST00000494864.1, ENST00000610745.5, ENST00000613082.1, ENST00000614273.1

Found 423 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATCTCATGAAGAACCGCTaGGTATGGAGCACACCTCAC +
Preference number: 2 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHLMKNR*VWSTPH
Trigger: GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAG...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR CCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGAAGAACCGCTGGGTATaGAGCACACCTCACCTGATG +
Preference number: 2 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQKNRWV*STPHLM
Trigger: CATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTT...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR TCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATACACCTGATGGACAGTTaGTTTATGCTCACCTTAAAC +
Preference number: 2 (lower is better)
Translates to: INTAFLLPQASDDDWAYIHLMDS*FMLTLN
Trigger: GTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTG...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
3UTR-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGATAGCCCACTACTCATaGAGAACCGCTGGGTATGGA +
Preference number: 2 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQIAHYS*RTAGYG
Trigger: TCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTAT...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR TCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCACCTTAAACGCTAATTaGGAAGCAGCACAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFTLNAN*EAAQKR
Trigger: CCTCTTTTGTGCTGCTTCTCAATTAGCGTTTAAGGT...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR TCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCACCTGATGGACAGTTaGTTTATGCTCACCTTAAAC +
Preference number: 2 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFHLMDS*FMLTLN
Trigger: GTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR CAA 90 bp CGTAAAAAGAACATCCAGGTAATTCATGGCATTTTCCATTATTCATaGGGCAGACACAGCTTAGATTTCTCTGCCTTCCACAGGAGAATG +
Preference number: 2 (lower is better)
Translates to: RKKNIQVIHGIFHYS*GRHSLDFSAFHRRM
Trigger: CATTCTCCTGTGGAAGGCAGAGAAATCTAAGCTGTGTCTGCCCAATGAATAATGGAAAATGCCATGAATTACCTGGATGTTCTTTTTACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
3UTR-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGACCTTAAACGCTAATTaGGAAGCAGCACAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQTLNAN*EAAQKR
Trigger: CCTCTTTTGTGCTGCTTCTCAATTAGCGTTTAAGGT...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR TCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAGGAGCACACCTCACCTaGTGGACAGTTGATTTATGC +
Preference number: 2 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKGAHLT*WTVDLC
Trigger: GCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCC...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAGATTCCCACCAAAAATaGCCTGGTTACCAAAATACT +
Preference number: 2 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKDSHQK*PGYQNT
Trigger: AGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATC...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAGTCTATTTCTGCATATaGGAGACCAATCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKVYFCI*ETNLGF
Trigger: GAATCCAAGATTGGTCTCCCATATGCAGAAATAGAC...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR CCA 72 bp GGCTACAGCAGCCCAAATTCACTGTCTCAGCCTTGGTaGGGCATAATATTTTGGAATGGCAAGTGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: GYSSPNSLSQPW*GIIFWNGKCQK
Trigger: TTTTTGGCACTTGCCATTCCAAAATATTATGCCCCACCAAGGCTGAGACAGTGAATTTGGGCTGCTGTAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
3UTR CCA 72 bp ATAGGCTACAGCAGCCCAAATTCACTGTCTCAGCCTTaGTGGGGCATAATATTTTGGAATGGCAAGTGCCAA +
Preference number: 3 (lower is better)
Translates to: IGYSSPNSLSQP*WGIIFWNGKCQ
Trigger: TTGGCACTTGCCATTCCAAAATATTATGCCCCACCAAGGCTGAGACAGTGAATTTGGGCTGCTGTAGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
3UTR CCA 72 bp GCATATGGGAGACCAATCTTGGATTCCCACCAAAAATaGCCTGGTTACCAAAATACTGCTTCATTCAGTAGT +
Preference number: 3 (lower is better)
Translates to: AYGRPILDSHQK*PGYQNTASFSS
Trigger: ACTACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
3UTR CCA 72 bp CATCTGGACCTGGTTGACATAATGAGGCATCCAGATTaGTTCATGATTATTTTTGCAGCTACACATTTCTCA +
Preference number: 3 (lower is better)
Translates to: HLDLVDIMRHPD*FMIIFAATHFS
Trigger: TGAGAAATGTGTAGCTGCAAAAATAATCATGAACCAATCTGGATGCCTCATTATGTCAACCAGGTCCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGGCGCGGACCGGAGCTaGCGCCTCCGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHGADRS*RLRCLS
Trigger: GCTGAGGCAACGGAGGCGGCAGCTCCGGTCCGCGCC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCCCGCAGGCCCGGCCTaGACACCTGCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHPAGPA*TPAALT
Trigger: AGTGAGGGCAGCAGGTGTCCAGGCCGGGCCTGCGGG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACCATGCTGCGGGGAGGTaGGGTTTCCAGTGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDHAAGR*GFQWRG
Trigger: CCCGCGCCACTGGAAACCGCACCTCCCCGCAGCATG...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACAGGTGCGGTTTCCAGTaGCGCGGGACAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHRCGFQ*RGTAGS
Trigger: GGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACCT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACTGGCGGCTGCGCGGCTaGCGCGTGAAGAAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDWRLRG*RVKKLR
Trigger: GCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCA...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACGCCACTGCAGCGCGGTaGACAGGGTGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDATAAR*TGCPGW
Trigger: CCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGC...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACAAGGCCGAGCCCTGCTaGACCAGGGCCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHKAEPC*TRAWWM
Trigger: CATCCACCAGGCCCTGGTGCAGCAGGGCTCGGCCTT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGGGGACGGAGAAGGGTaGCTCGCTCGCCGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIGDGEG*LARRAP
Trigger: CGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTGCCCGCGCCCACCGTaGGCCCGAACTCTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHCPRPP*ARTLRC
Trigger: ACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGAGCCCCGCTGCCCTTaGGGACCTGGCAAAGTCGAG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHEPRCP*GPGKVE
Trigger: CTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTGGCCCTCGAGGACTTaGCGGCTGCGCGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIWPSRT*RLRGWR
Trigger: GCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTGCGCGGCTGGCGCGTaGAGAAGTTGCGCATCATGC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHCAAGA*RSCASC
Trigger: GCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCCCGGCCTGGACACCTaGTGCCCTCACTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHPGLDT*CPHWKL
Trigger: AAGCTTCCAGTGAGGGCAGCAGGTGTCCAGGCCGGG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGAGCGAACGAGAGGTaGGCCGCCTGGCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKRANER*AAWPTA
Trigger: GGCGGTGGGCCAGGCGGCTCACCTCTCGTTCGCTCG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAGCTGCCGCCTCCGTTaGCTCAGCAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRSCRLR*LSSRWP
Trigger: GGGCCAGCGGCTGCTGAGGCAACGGAGGCGGCAGCT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCGGCGCGGACCGGAGCTaGCGCCTCCGTTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLGADRS*RLRCLS
Trigger: GCTGAGGCAACGGAGGCGGCAGCTCCGGTCCGCGCC...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGGCCGAAAGCCATGCTaGGGCCGCCGGACACCACAC +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIGRKPC*GRRTPH
Trigger: GTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATCACGTCCACCAGGCTaGCCGCGCCCACCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKSRPPG*PRPPCA
Trigger: GGCGCACGGTGGGCGCGGGCAGCCTGGTGGACGTGA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGGCCCACATGCACAGTaGCCAGCACCGACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHGPHAQ*PAPTGV
Trigger: TACTCCTGTCGGTGCTGGCCACTGTGCATGTGGGCC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTGCTGCACCAGGGCCTaGTGGATGGCGCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLICCTRA*WMARSP
Trigger: TGGCGAGCGCGCCATCCACCAGGCCCTGGTGCAGCA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCAGGAGCGCTTGGATTaGGATGGGGACGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHQERLD*DGDGEG
Trigger: CCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCCCACTCGAGTCTCTTaGCGTCGTCAGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHPTRVS*RRQCQE
Trigger: CTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGTGGACAGGGTGTCCTaGCTGGCGCCGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHVDRVS*LAPKMS
Trigger: TGACATCTTCGGCGCCAGCCAGGACACCCTGTCCAC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACACTCTTCGTTGTGGCTaGGCAGCTCACGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDTLRCG*AAHGTR
Trigger: CCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCAGCTGCCGCCTCCGTTaGCTCAGCAGCCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLSCRLR*LSSRWP
Trigger: GGGCCAGCGGCTGCTGAGGCAACGGAGGCGGCAGCT...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGGCCGAAAGCCATGCTaGGGCCGCCGGACACCACAC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRGRKPC*GRRTPH
Trigger: GTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTCGCCGAGCCCCGCTaGCCTTGGGGACCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLAEPR*PWGPGK
Trigger: TTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCTGGGCTGCGCGCCGCTaGACCTTCCAGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRWAARR*TFQCSE
Trigger: CTCGGAGCACTGGAAGGTGCAGCGGCGCGCAGCCCA...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTGCCCGCGCCCACCGTaGGCCCGAACTCTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLICPRPP*ARTLRC
Trigger: ACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACAGGAGCGTGGTCTGCTaGATGGACAGCGGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHRSVVC*MDSGFS
Trigger: GCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTCCAGGGCCTGGTGGATaGCGCGCTCGCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIPGPGG*RARHSA
Trigger: TGCTGAATGGCGAGCGCGCCATCCACCAGGCCCTGG...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTGCACCAGGGCCTGGTaGATGGCGCGCTCGCCATTC +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLICTRAW*MARSPF
Trigger: GAATGGCGAGCGCGCCATCCACCAGGCCCTGGTGCA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGCCCTTGGGGACCTaGCAAAGTCGAGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHLPLGT*QSRGFL
Trigger: GAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACCCGCAGGCCCGGCCTaGACACCTGCTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKPAGPA*TPAALT
Trigger: AGTGAGGGCAGCAGGTGTCCAGGCCGGGCCTGCGGG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAGGTGCGGTTTCCAGTaGCGCGGGACAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRRCGFQ*RGTAGS
Trigger: GGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACCT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGCCTCGCTCAGCACGTaGCCCTCGAGGACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRASLST*PSRTWR
Trigger: CCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATCGAGCGAACGAGAGGTaGGCCGCCTGGCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHRANER*AAWPTA
Trigger: GGCGGTGGGCCAGGCGGCTCACCTCTCGTTCGCTCG...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTCCCCTCGTCACTGTaGGAGGTCTGGACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHLPSSL*EVWTSS
Trigger: AGAAGAAGTCCAGACCTCTCACAGTGACGAGGGGAG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAGTGGCCGAAAGCCATaGTGCGGCCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRSGRKP*CGRRTP
Trigger: TGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCCACT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACTCGCCGAGCCCCGCTaGCCTTGGGGACCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKLAEPR*PWGPGK
Trigger: TTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCTCACGTCCACCAGGCTaGCCGCGCCCACCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMASRPPG*PRPPCA
Trigger: GGCGCACGGTGGGCGCGGGCAGCCTGGTGGACGTGA...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACGCCTGCACTCGAGTCTaGACATCAGGATACCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDACTRV*TSGYLV
Trigger: CACCAGGTATCCTGATGTGCAGACTCGAGTGCAGGC...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGCTCCGAGAAGGAACTaGGACCTTTGCCTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHAPRRN*DLCLGQ
Trigger: TTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCGGTGCGCACCGGGTTaGGGAAGTACTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRRCAPG*GSTAAR
Trigger: CCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAGCCACTGCAGCGCGGTaGACAGGGTGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYIATAAR*TGCPGW
Trigger: CCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGC...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAAAGGGTCGTTCGGGCTaGGGCTGGTGCCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYIKGRSG*GWCPCC
Trigger: GCAGCATGGGCACCAGCCTCAGCCCGAACGACCCTT...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTAACACACGGCACTCATaGCGTTGGCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLINTRHS*RWPRPR
Trigger: TCGTGGCCGTGGCCAACGTCATGAGTGCCGTGTGTT...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAAGGGTCGTTCGGGCTaGGGCTGGTGCCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRKGRSG*GWCPCD
Trigger: GTCACATGGGCACCAGCCTCAGCCCGAACGACCCTT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAAGCCGCTGGCCCACATaGACAGTGGCCAGCACCGAC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKSRWPT*TVASTD
Trigger: GTCGGTGCTGGCCACTGTGCATGTGGGCCAGCGGCT...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAGGGGACGGAGAAGGGTaGCTCGCTCGCCGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVGDGEG*LARRAP
Trigger: CGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCC...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGGAACTGGGACCTTTaGCTAGGGCAAGACGTCAAC +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDRNWDL*LGQDVN
Trigger: GTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCATCATGCTGTGGGCTaGGCGCCGCTGCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRHHAVG*APLHLP
Trigger: TGGAAGGTGCAGCGGCGCGCAGCCCACAGCATGATG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAAGGAGGAGCAGCCACTaGAGCGCGGTGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKRRSSH*SAVDRV
Trigger: CACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCT...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGGTGCCCATGTGACCTaGGGGGAGGTGCGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRGAHVT*GEVRFP
Trigger: TGGAAACCGCACCTCCCCGCAGGTCACATGGGCACC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCCAAGACAGAGGTGTTaGCAGTGGTGGCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHPRQRC*QWWHEE
Trigger: TTCCTCATGCCACCACTGCCAACACCTCTGTCTTGG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGCGTGGTCTGCTGGATaGACAGCGGGTTTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRAWSAG*TAGLAA
Trigger: GGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGGAGTAGCAGGAGCGTaGTCTGCTGGATGGACAGCG +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIGVAGA*SAGWTA
Trigger: CGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGTTTCCGATCAGTaGCCACGCAAACGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKRVSDQ*PRKRAR
Trigger: CCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTCATTCAGCACCACTATaGGGCAGCTGCCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIHSAPL*GSCPGG
Trigger: TCCGCCTGGGCAGCTGCCCCATAGTGGTGCTGAATG...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCTGCACCAGGGCCTGGTaGATGGCGCGCTCGCCATTC +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLCTRAW*MARSPF
Trigger: GAATGGCGAGCGCGCCATCCACCAGGCCCTGGTGCA...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACCTCATGAAGAACCGCTaGGTATGGAGCACACCTCAC +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDLMKNR*VWSTPH
Trigger: GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAG...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGCGCTTGGATTGGGATaGGGACGGAGAAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIALGLG*GRRRVP
Trigger: AGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATTGCGCATCATGCTGTaGGCTGCGCGCCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKLRIML*AARRCT
Trigger: GGTGCAGCGGCGCGCAGCCCACAGCATGATGCGCAA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACCACTTCAGTGGGTCATaGTTCACAGACCACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDHFSGS*FTDHWL
Trigger: CAACCAGTGGTCTGTGAATCATGACCCACTGAAGTG...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACATAGCCCACTACTCATaGAGAACCGCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDIAHYS*RTAGYG
Trigger: TCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTAT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCAGCCGCTGGCCCACATaGACAGTGGCCAGCACCGAC +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFSRWPT*TVASTD
Trigger: GTCGGTGCTGGCCACTGTGCATGTGGGCCAGCGGCT...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTCCACTATGGGGCAGCTaGCCAGGCGGATCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIPLWGS*PGGSGK
Trigger: TTTTCCAGATCCGCCTGGGCAGCTGCCCCATAGTGG...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACAAAGTTCTTCGCCAATaGACCGCCTTTTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHKVLRQ*TAFCPL
Trigger: CAGTGGGCAAAAGGCGGTGCATTGGCGAAGAACTTT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGGCTGCGCGCCGCTaGACCTTCCAGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAWAARR*TFQCSE
Trigger: CTCGGAGCACTGGAAGGTGCAGCGGCGCGCAGCCCA...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAGAAGTTGCGCATCATaGTGTGGGCTGCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRRSCAS*CGLRAA
Trigger: AGCGGCGCGCAGCCCACAGCATGATGCGCAACTTCT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCAGGAGGAGCAGCCACTaGAGCGCGGTGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFRRSSH*SAVDRV
Trigger: CACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCT...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTGGGGGTCGGTGAGTaGCGTCAATTCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLGVGE*RQFPCP
Trigger: AGGGCATGGGAATTGACGCCACTCACCGACCCCCAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAGCGTGGTCTGCTGGATaGACAGCGGGTTTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKAWSAG*TAGLAA
Trigger: GGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGC...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTGCTGCACCAGGGCCTaGTGGATGGCGCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHCCTRA*WMARSP
Trigger: TGGCGAGCGCGCCATCCACCAGGCCCTGGTGCAGCA...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCAGGAGCGCTTGGATTaGGATGGGGACGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRQERLD*DGDGEG
Trigger: CCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATGGCCCTCGAGGACTTaGCGGCTGCGCGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVWPSRT*RLRGWR
Trigger: GCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTCACAGACCACTGGTTaGCAAAAACCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHSQTTG*QKPQCP
Trigger: AGGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACGGTCTGGACTTCTTCTaGCATAAACAGCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDGLDFF*HKQPPF
Trigger: GAAAGGAGGCTGTTTATGTCAGAAGAAGTCCAGACC...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCACTCTTCGTTGTGGCTaGGCAGCTCACGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRTLRCG*AAHGTR
Trigger: CCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACACATCTGGACCTGGTTaGCATAATGAGGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHTSGPG*HNEASR
Trigger: TCTGGATGCCTCATTATGTCAACCAGGTCCAGATGT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCAGCAGGAGCGTGGTCTaGTGGATGGACAGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRSRSVV*WMDSGF
Trigger: AAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATAAGGCCGAGCCCTGCTaGACCAGGGCCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHKAEPC*TRAWWM
Trigger: CATCCACCAGGCCCTGGTGCAGCAGGGCTCGGCCTT...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCTCTTGGCGTCGTCAGTaGCAGGAGCGCTTGGATTGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRSWRRQ*QERLDW
Trigger: CCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGA...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAGGGTTGGGGAAGTACTaGAGCCAGGGCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKGLGKY*SQGITS
Trigger: GGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCC...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCATTCGCGGAAAACGGTaGGCACCGGGTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRIRGKR*APGWGS
Trigger: ACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAAT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGGACATAGGGCAGGTTaGGCTGGTCACCCATACAAG +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIGHRAG*AGHPYK
Trigger: CTTGTATGGGTGACCAGCCCAACCTGCCCTATGTCC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACGTTAGGCCACTTCAGTaGGTCATGATTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDVRPLQ*VMIHRP
Trigger: TGGTCTGTGAATCATGACCCACTGAAGTGGCCTAAC...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCGGAGTAGCAGGAGCGTaGTCTGCTGGATGGACAGCG +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLGVAGA*SAGWTA
Trigger: CGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCC...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAGGCCCACATGCACAGTaGCCAGCACCGACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKGPHAQ*PAPTGV
Trigger: TACTCCTGTCGGTGCTGGCCACTGTGCATGTGGGCC...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATCGCGTTTCCGATCAGTaGCCACGCAAACGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHRVSDQ*PRKRAR
Trigger: CCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCG...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCCATTCAGCACCACTATaGGGCAGCTGCCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLHSAPL*GSCPGG
Trigger: TCCGCCTGGGCAGCTGCCCCATAGTGGTGCTGAATG...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTATGGCGGCTGCGCGGCTaGCGCGTGAAGAAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVWRLRG*RVKKLR
Trigger: GCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCA...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAGTGGACAGGGTGTCCTaGCTGGCGCCGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYIVDRVS*LAPKMS
Trigger: TGACATCTTCGGCGCCAGCCAGGACACCCTGTCCAC...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTTGGCAGTGGTGGCATaGGGAATAGTGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLILAVVA*GIVTGT
Trigger: TGTGCCTGTCACTATTCCTCATGCCACCACTGCCAA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTCTGAAATCGCACTGGTaGGCCAGGATGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLILKSHW*ARMEMK
Trigger: CTTCATCTCCATCCTGGCTCACCAGTGCGATTTCAG...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCATTTGGGTTGGCCCTaGAATCGCACTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRHLGWP*NRTGEP
Trigger: TGGCTCACCAGTGCGATTTCAGGGCCAACCCAAATG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCATCAGGATACCTGGTaGAGAGGAGGAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRHQDTW*RGGAAT
Trigger: AGTGGCTGCTCCTCCTCTTCACCAGGTATCCTGATG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIDLIQF*LHSSLH
Trigger: GTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACCACTATGGGGCAGCTaGCCAGGCGGATCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKPLWGS*PGGSGK
Trigger: TTTTCCAGATCCGCCTGGGCAGCTGCCCCATAGTGG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAGGCTGGTGCCCATGCTaGGGGGAGGTGCGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVGWCPC*GEVRFP
Trigger: TGGAAACCGCACCTCCCCGCAGCATGGGCACCAGCC...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGGACATAGGGCAGGTTaGGCTGGTCACCCATACAAG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRGHRAG*AGHPYK
Trigger: CTTGTATGGGTGACCAGCCCAACCTGCCCTATGTCC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCTGCGGCTCTCACAACTaGAGTCGCAGAAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFCGSHN*SRRSAR
Trigger: GCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCA...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCCAGGGCCTGGTGGATaGCGCGCTCGCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQPGPGG*RARHSA
Trigger: TGCTGAATGGCGAGCGCGCCATCCACCAGGCCCTGG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATACTGCCCTTGGGGACCTaGCAAAGTCGAGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYILPLGT*QSRGFL
Trigger: GAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAG...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAGAGCCCCGCTGCCCTTaGGGACCTGGCAAAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVEPRCP*GPGKVE
Trigger: CTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTC...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCGCGCTTGGATTGGGATaGGGACGGAGAAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFALGLG*GRRRVP
Trigger: AGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGC...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCCGAACTCTTCGTTGTaGCTGAGCAGCTCACGGAAC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRPNSSL*LSSSRN
Trigger: GTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCACCTGATGGACAGTTaGTTTATGCTCACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHHLMDS*FMLTLN
Trigger: GTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGGAGCACACCTCACCTaGTGGACAGTTGATTTATGC +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIGAHLT*WTVDLC
Trigger: GCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACATCAGGATACCTGGTaGAGAGGAGGAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKHQDTW*RGGAAT
Trigger: AGTGGCTGCTCCTCCTCTTCACCAGGTATCCTGATG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCAATTCCCATGCCCTTaGGGCTCTCACAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRQFPCP*GSHNWS
Trigger: ACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATGGCGTCAATTCCCATaGCCTTGCGGCTCTCACAAC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKWRQFP*PCGSHN
Trigger: GTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCCCGGCCTGGACACCTaGTGCCCTCACTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQPGLDT*CPHWKL
Trigger: AAGCTTCCAGTGAGGGCAGCAGGTGTCCAGGCCGGG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTAAGTTGCGGTTGAGCTaGTCGAATTCGCGGAAAACG +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIKLRLS*SNSRKT
Trigger: CGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTT...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTTTCGCAGGCTCATTTaGGTTGGCCCTGAAATCGCA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIFRRLI*VGPEIA
Trigger: TGCGATTTCAGGGCCAACCCAAATGAGCCTGCGAAA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTCATGAAGAACCGCTaGGTATGGAGCACACCTCAC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLMKNR*VWSTPH
Trigger: GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCCCCACTCGAGTCTCTTaGCGTCGTCAGTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAPTRVS*RRQCQE
Trigger: CTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGG...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATTGCGCATCATGCTGTaGGCTGCGCGCCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVLRIML*AARRCT
Trigger: GGTGCAGCGGCGCGCAGCCCACAGCATGATGCGCAA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCGCCTCGCTCAGCACGTaGCCCTCGAGGACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVASLST*PSRTWR
Trigger: CCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGC...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACCGAACTCTTCGTTGTaGCTGAGCAGCTCACGGAAC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKPNSSL*LSSSRN
Trigger: GTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTACGGTGCGCACCGGGTTaGGGAAGTACTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVRCAPG*GSTAAR
Trigger: CCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCG...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGGAGACTGGGGGTCGGTaGGTGGCGTCAATTCCCATG +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQETGGR*VASIPM
Trigger: CATGGGAATTGACGCCACTCACCGACCCCCAGTCTC...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACTGGTTAGACCATAACTaGAATTCATTTTCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDWLDHN*NSFSQA
Trigger: AGCCTGCGAAAATGAATTTCAGTTATGGTCTAACCA...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGGAGCACACCTCACCTaGTGGACAGTTGATTTATGC +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRGAHLT*WTVDLC
Trigger: GCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAAACACACGGCACTCATaGCGTTGGCCACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVNTRHS*RWPRPR
Trigger: TCGTGGCCGTGGCCAACGTCATGAGTGCCGTGTGTT...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAGCCTGCACTCGAGTCTaGACATCAGGATACCTGATG +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKACTRV*TSGYLM
Trigger: CATCAGGTATCCTGATGTGCAGACTCGAGTGCAGGC...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTTTCAGCTTGCCTCTTaGTTCTTATTGGCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHFQLAS*FLLASF
Trigger: GAAACTTGCCAATAAGAAGCAAGAGGCAAGCTGAAA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCATTCGCGGAAAACGGTaGGCACCGGGTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAIRGKR*APGWGS
Trigger: ACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAAT...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGAAGGCTTTCGCAGTaGCTCAAGAACTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKRRLSQ*LKNLSR
Trigger: CCTGGACAAGTTCTTGAGGCACTGCGAAAGCCTTCG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGTTAGGCCACTTCAGTaGGTCATGATTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIVRPLQ*VMIHRP
Trigger: TGGTCTGTGAATCATGACCCACTGAAGTGGCCTAAC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGTCCAAGAATCGAGCTaGATCAAAGTTCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIVQESS*IKVLRV
Trigger: AACCCGGAGAACTTTGATCCAGCTCGATTCTTGGAC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTTGGCTTGTAAATTTTaGACAGCACTATCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHLACKF*TALSRS
Trigger: GCTCCTTGATAGTGCTGTCCAAAATTTACAAGCCAA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAAAGAACCGCTGGGTATaGAGCACACCTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKKNRWV*STPHLM
Trigger: CATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTT...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCCTCATGAAGAACCGCTaGGTATGGAGCACACCTCAC +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLLMKNR*VWSTPH
Trigger: GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAG...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGTCTATTTCTGCATATaGGAGACCAATCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHVYFCI*ETNLGF
Trigger: GAATCCAAGATTGGTCTCCCATATGCAGAAATAGAC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCTTGGCAGTGGTGGCATaGGGAATAGTGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFLAVVA*GIVTGT
Trigger: TGTGCCTGTCACTATTCCTCATGCCACCACTGCCAA...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAGGAGCACACCTCACCTaGTGGACAGTTGATTTATGC +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYIGAHLT*WTVDLC
Trigger: GCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCC...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAATAGCCCACTACTCATaGAGAACCGCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKIAHYS*RTAGYG
Trigger: TCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTAT...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAAGAAGTTGCGCATCATaGTGTGGGCTGCGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVRSCAS*CGLRAA
Trigger: AGCGGCGCGCAGCCCACAGCATGATGCGCAACTTCT...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATGCCTGCACTCGAGTCTaGACATCAGGATACCTGGTG +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHACTRV*TSGYLV
Trigger: CACCAGGTATCCTGATGTGCAGACTCGAGTGCAGGC...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAAGGAGCGTGGTCTGCTaGATGGACAGCGGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVRSVVC*MDSGFS
Trigger: GCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCT...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACATTGGCAAGTTTCCTTaGCTTGTAAATTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDIGKFP*LVNFGQ
Trigger: CTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAAT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATGCTCCGAGAAGGAACTaGGACCTTTGCCTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHAPRRN*DLCLGQ
Trigger: TTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGC...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATCACAGACCACTGGTTaGCAAAAACCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKSQTTG*QKPQCP
Trigger: AGGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR TCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCCTGAAATCGCACTGGTaGGCCAGGATGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMALKSHW*ARMEMK
Trigger: CTTCATCTCCATCCTGGCTCACCAGTGCGATTTCAG...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCATTTGGGTTGGCCCTaGAATCGCACTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQHLGWP*NRTGEP
Trigger: TGGCTCACCAGTGCGATTTCAGGGCCAACCCAAATG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATAGCCCACTACTCATaGAGAACCGCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFIAHYS*RTAGYG
Trigger: TCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTAT...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR GCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMADLIQF*LHSSLH
Trigger: GTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTC...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR GCA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACATGAAGAGAAAAAGCTaGATCTTAGAAAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHMKRKS*ILESSS
Trigger: CGAAGAACTTTCTAAGATGCAGCTTTTTCTCTTCAT...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATAGGAACTGGGACCTTTaGCTAGGGCAAGACGTCAAC +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHRNWDL*LGQDVN
Trigger: GTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCT...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAACATCATGCTGTGGGCTaGGCGCCGCTGCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKHHAVG*APLHLP
Trigger: TGGAAGGTGCAGCGGCGCGCAGCCCACAGCATGATG...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCGGGTTGGGGAAGTACTaGAGCCAGGGCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVGLGKY*SQGITS
Trigger: GGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCC...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCCCAAGACAGAGGTGTTaGCAGTGGTGGCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAPRQRC*QWWHEE
Trigger: TTCCTCATGCCACCACTGCCAACACCTCTGTCTTGG...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAAAACCACAGTGTCCTTaGGAATGTGGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKKPQCP*ECGSPR
Trigger: TCTTGGGCTACCACATTCCCAAGGACACTGTGGTTT...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
3UTR CAA 72 bp AATAGGCTACAGCAGCCCAAATTCACTGTCTCAGCCTaGGTGGGGCATAATATTTTGGAATGGCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NRLQQPKFTVSA*VGHNILEWQVP
Trigger: TGGCACTTGCCATTCCAAAATATTATGCCCCACCAAGGCTGAGACAGTGAATTTGGGCTGCTGTAGCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTTGGCAGTGGTGGCATaGGGAATAGTGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQLAVVA*GIVTGT
Trigger: TGTGCCTGTCACTATTCCTCATGCCACCACTGCCAA...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCTGAAATCGCACTGGTaGGCCAGGATGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQLKSHW*ARMEMK
Trigger: CTTCATCTCCATCCTGGCTCACCAGTGCGATTTCAG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCACCTTAAACGCTAATTaGGAAGCAGCACAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRTLNAN*EAAQKR
Trigger: CCTCTTTTGTGCTGCTTCTCAATTAGCGTTTAAGGT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTACGAAGGCTTTCGCAGTaGCTCAAGAACTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVRRLSQ*LKNLSR
Trigger: CCTGGACAAGTTCTTGAGGCACTGCGAAAGCCTTCG...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAGGACATAGGGCAGGTTaGGCTGGTCACCCATACAAG +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVGHRAG*AGHPYK
Trigger: CTTGTATGGGTGACCAGCCCAACCTGCCCTATGTCC...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTTTCGCAGGCTCATTTaGGTTGGCCCTGAAATCGCA +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHFRRLI*VGPEIA
Trigger: TGCGATTTCAGGGCCAACCCAAATGAGCCTGCGAAA...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCACTTCAGTGGGTCATaGTTCACAGACCACTGGTTG +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQHFSGS*FTDHWL
Trigger: CAACCAGTGGTCTGTGAATCATGACCCACTGAAGTG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACACCTGATGGACAGTTaGTTTATGCTCACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKHLMDS*FMLTLN
Trigger: GTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVDLIQF*LHSSLH
Trigger: GTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTC...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR GCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGAAAGTTCTTCGCCAATaGACCGCCTTTTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQKVLRQ*TAFCPL
Trigger: CAGTGGGCAAAAGGCGGTGCATTGGCGAAGAACTTT...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCAAACCACAGTGTCCTTaGGAATGTGGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAKPQCP*ECGSPR
Trigger: TCTTGGGCTACCACATTCCCAAGGACACTGTGGTTT...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATAAACCACAGTGTCCTTaGGAATGTGGTAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHKPQCP*ECGSPR
Trigger: TCTTGGGCTACCACATTCCCAAGGACACTGTGGTTT...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATGTCCAAGAATCGAGCTaGATCAAAGTTCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: DQSWIPTKNGLVTKILLHVQESS*IKVLRV
Trigger: AACCCGGAGAACTTTGATCCAGCTCGATTCTTGGAC...ATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACCTCTTGCTTCTTATTaGCAAGTTTCCTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKPLASY*QVSLAC
Trigger: ACAAGCCAAGGAAACTTGCCAATAAGAAGCAAGAGG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACCACCAAAAATGGCCTaGTTACCAAAATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKPPKMA*LPKYCF
Trigger: GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCTCACTGTCTCAGCCTTaGTGGGGCATAATATTTTGG +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFSLSQP*WGIIFW
Trigger: CCAAAATATTATGCCCCACCAAGGCTGAGACAGTGA...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATGGTTAGACCATAACTaGAATTCATTTTCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKWLDHN*NSFSQA
Trigger: AGCCTGCGAAAATGAATTTCAGTTATGGTCTAACCA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATTTCAGCTTGCCTCTTaGTTCTTATTGGCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKFQLAS*FLLASF
Trigger: GAAACTTGCCAATAAGAAGCAAGAGGCAAGCTGAAA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGGTCCAAGAATCGAGCTaGATCAAAGTTCTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQVQESS*IKVLRV
Trigger: AACCCGGAGAACTTTGATCCAGCTCGATTCTTGGAC...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATATTGGCTTGTAAATTTTaGACAGCACTATCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYILACKF*TALSRS
Trigger: GCTCCTTGATAGTGCTGTCCAAAATTTACAAGCCAA...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCATTGGCAAGTTTCCTTaGCTTGTAAATTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRIGKFP*LVNFGQ
Trigger: CTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAAT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCCTCTTGCTTCTTATTaGCAAGTTTCCTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFPLASY*QVSLAC
Trigger: ACAAGCCAAGGAAACTTGCCAATAAGAAGCAAGAGG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTTCATTCAGTAGTTTaGTGTAAGTGTTTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLHSVV*CKCLGV
Trigger: TACACCCAAACACTTACACCAAACTACTGAATGAAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAGATTCCCACCAAAAATaGCCTGGTTACCAAAATACT +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYIDSHQK*PGYQNT
Trigger: AGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATC...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATCACACACTTTACACTaGAATTACTTGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKSHTLH*NYLSLS
Trigger: AGACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATATCACACACTTTACACTaGAATTACTTGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: INTAFLLPQASDDDWAYISHTLH*NYLSLS
Trigger: AGACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGA...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACTTTGTCTACAACTATaGACTGTAGCTATTATGCAC +
Preference number: 4 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKLCLQL*TVAIMH
Trigger: GTGCATAATAGCTACAGTGCATAGTTGTAGACAAAG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAGTTAGGCCACTTCAGTaGGTCATGATTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVVRPLQ*VMIHRP
Trigger: TGGTCTGTGAATCATGACCCACTGAAGTGGCCTAAC...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAAAGAACCGCTGGGTATaGAGCACACCTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKKNRWV*STPHLM
Trigger: CATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTT...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCCTGTCTCAGCCTTGGTaGGGCATAATATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMALSQPW*GIIFWN
Trigger: ATTCCAAAATATTATGCCCCACCAAGGCTGAGACAG...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCATGAGGCATCCAGATTaGTTCATGATTATTTTTGCA +
Preference number: 4 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRMRHPD*FMIIFA
Trigger: TGCAAAAATAATCATGAACCAATCTGGATGCCTCAT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
3UTR CAA 72 bp AACATCCAGGTAATTCATGGCATTTTCCATTATTCATaGGGCAGACACAGCTTAGATTTCTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NIQVIHGIFHYS*GRHSLDFSAFH
Trigger: GTGGAAGGCAGAGAAATCTAAGCTGTGTCTGCCCAATGAATAATGGAAAATGCCATGAATTACCTGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCACCTGATGGACAGTTaGTTTATGCTCACCTTAAAC +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQHLMDS*FMLTLN
Trigger: GTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCCGGTAGAAACACAATaGGGGTTTCTGATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQPVETQ*GFLIKA
Trigger: TGCTTTAATCAGAAACCCTCATTGTGTTTCTACCGG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAAAGTTGCGGTTGAGCTaGTCGAATTCGCGGAAAACG +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKKLRLS*SNSRKT
Trigger: CGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTT...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCACACAGCTTTCCTTTTaGCGCAAGCATCTGATGACG +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVTQLSF*RKHLMT
Trigger: CGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGT...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTTCGCAGGCTCATTTaGGTTGGCCCTGAAATCGCA +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKFRRLI*VGPEIA
Trigger: TGCGATTTCAGGGCCAACCCAAATGAGCCTGCGAAA...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTACCTCTTGCTTCTTATTaGCAAGTTTCCTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVPLASY*QVSLAC
Trigger: ACAAGCCAAGGAAACTTGCCAATAAGAAGCAAGAGG...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCTTCATTCAGTAGTTTaGTGTAAGTGTTTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFLHSVV*CKCLGV
Trigger: TACACCCAAACACTTACACCAAACTACTGAATGAAG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCTCAAATTCTGTACTTTaGCAAGCAAAAGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLSNSVL*QAKEVQ
Trigger: TTGTACCTCTTTTGCTTGCCAAAGTACAGAATTTGA...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAGCATCTGATGACGACTaGGCCTACATACGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVASDDD*AYIRKN
Trigger: GTTTTTACGTATGTAGGCCCAGTCGTCATCAGATGC...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCAGATTCGCCAAAATTTaGGTGAAGAAAAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMARFAKI*VKKRNP
Trigger: AGGGTTTCTTTTCTTCACTCAAATTTTGGCGAATCT...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTATTTCAGCTTGCCTCTTaGTTCTTATTGGCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVFQLAS*FLLASF
Trigger: GAAACTTGCCAATAAGAAGCAAGAGGCAAGCTGAAA...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR GCA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCTTTTTGTCTATTTCTaGATATGGGAGACCAATCTT +
Preference number: 4 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFLFVYF*IWETNL
Trigger: AAGATTGGTCTCCCATATGCAGAAATAGACAAAAAG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCATTGGCAAGTTTCCTTaGCTTGTAAATTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAIGKFP*LVNFGQ
Trigger: CTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAAT...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGGATTCCCACCAAAAATaGCCTGGTTACCAAAATACT +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQDSHQK*PGYQNT
Trigger: AGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATC...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATTGGCTTGTAAATTTTaGACAGCACTATCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVLACKF*TALSRS
Trigger: GCTCCTTGATAGTGCTGTCCAAAATTTACAAGCCAA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTAGTCTATTTCTGCATATaGGAGACCAATCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVVYFCI*ETNLGF
Trigger: GAATCCAAGATTGGTCTCCCATATGCAGAAATAGAC...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCTCGCCAAAATTTGAGTaGAGAAAAGAAACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVSPKFE*RKETLL
Trigger: AAGCAGGGTTTCTTTTCTTCACTCAAATTTTGGCGA...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR TCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCTGCATACATTTCATTTaGGCTTTATGCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVCIHFI*ALCFPS
Trigger: GCTGGGAAAGCATAAAGCTCAAATGAAATGTATGCA...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTTCATCAAAGGATCGTaGCATCCTTTCTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQFIKGS*HPFYFL
Trigger: TAGAAAATAGAAAGGATGGCACGATCCTTTGATGAA...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAACCACCAAAAATGGCCTaGTTACCAAAATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKPPKMA*LPKYCF
Trigger: GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGG...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATGGTTAGACCATAACTaGAATTCATTTTCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKWLDHN*NSFSQA
Trigger: AGCCTGCGAAAATGAATTTCAGTTATGGTCTAACCA...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR TCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCACCTATGAGACTTACTaGAATCAGTACATTATGGTC +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVTYETY*NQYIMV
Trigger: GACCATAATGTACTGATTTCAGTAAGTCTCATAGGT...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTACTTTTTGTCTATTTCTaGATATGGGAGACCAATCTT +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVLFVYF*IWETNL
Trigger: AAGATTGGTCTCCCATATGCAGAAATAGACAAAAAG...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CCA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATCCACTAACTTCAACTaGAACTCAATAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVSTNFN*NSIIRM
Trigger: CATTCTGATTATTGAGTTCCAGTTGAAGTTAGTGGA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCTCTAGAAGAGAAACTTaGTCAGTTGTAATGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVSRRET*SVVMGV
Trigger: AACTCCCATTACAACTGACCAAGTTTCTCTTCTAGA...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCATGAAGAGAAAAAGCTaGATCTTAGAAAGTTCTTCG +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVMKRKS*ILESSS
Trigger: CGAAGAACTTTCTAAGATGCAGCTTTTTCTCTTCAT...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR GCA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCTTTAGCACACTTGGTTaGGTTAGTTGTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVFSTLG*VSCTFQ
Trigger: TTGAAAAGTACAACTAACGCAACCAAGTGTGCTAAA...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAATTCATGATAACTCATaGAACCCCACTATACTCACT +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKIHDNS*NPTILT
Trigger: AGTGAGTATAGTGGGGTTCCATGAGTTATCATGAAT...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAGTAAAGGCTAAGTTCTaGGACATGAAAGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKVKAKF*DMKAFR
Trigger: TCTAAAAGCTTTCATGTCCCAGAACTTAGCCTTTAC...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR GCA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATCTTCTAAATGTCCATaGTTTGAATTTTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKSSKCP*FEFCAP
Trigger: TGGAGCACAAAATTCAAAGCATGGACATTTAGAAGA...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS GCA 90 bp CCACGACGGTCAGCGGCCTCGGGTCGAGGAAGGCGCCGTCCGCGCTaGCGCGCACCAGCAGCGCCACCAGCTCGCGCGCCTCGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PRRSAASGRGRRRPR*RAPAAPPARAPRSA
Trigger: TGCTGAGCGAGGCGCGCGAGCTGGTGGCGCTGCTGGTGCGCGGCAGCGCGGACGGCGCCTTCCTCGACCCGAGGCCGCTGACCGTCGTGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp CGAGAGGTGAGCCGCCTGGCCCACCGCCGCCGCGTTTCCGATCAGTaGCCACGCAAACGGGCCCGGGGGCGCGGACCGGAGCTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: REVSRLAHRRRVSDQ*PRKRARGRGPELPP
Trigger: AGGCGGCAGCTCCGGTCCGCGCCCCCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCGGCGGCGGTGGGCCAGGCGGCTCACCTCTCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp CACGCAAACGGGCCCGGGGGCGCGGACCGGAGCTGCCGCCTCCGTTaGCTCAGCAGCCGCTGGCCCACATGCACAGTGGCCAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: HANGPGGADRSCRLR*LSSRWPTCTVASTD
Trigger: GTCGGTGCTGGCCACTGTGCATGTGGGCCAGCGGCTGCTGAGGCAACGGAGGCGGCAGCTCCGGTCCGCGCCCCCGGGCCCGTTTGCGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp CCGCGCACCAGCAGCGCCACCAGCTCGCGCGCCTCGCTCAGCACGTaGCCCTCGAGGACTTGGCGGCTGCGCGGCTGGCGCGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PRTSSATSSRASLST*PSRTWRLRGWRVKK
Trigger: CTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGCGCGCGAGCTGGTGGCGCTGCTGGTGCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp CGCGCCGCTGCACCTTCCAGTGCTCCGAGTAGTGGCCGAAAGCCATaGTGCGGCCGCCGGACACCACACGGAAGGAGGCGAAGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RAAAPSSAPSSGRKP*CGRRTPHGRRRRPA
Trigger: GGCCGGCCTTCGCCTCCTTCCGTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCCACTACTCGGAGCACTGGAAGGTGCAGCGGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GCCTCGCTCAGCACGTGGCCCTCGAGGACTTGGCGGCTGCGCGGCTaGCGCGTGAAGAAGTTGCGCATCATGCTGTGGGCTGCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: ASLSTWPSRTWRLRG*RVKKLRIMLWAARR
Trigger: GCGGCGCGCAGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp CCAGGCTGCCCGCGCCCACCGTGCGCCCGAACTCTTCGTTGTGGCTaGGCAGCTCACGGAACTCGGGGTCGTCGTGGCTGTAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGCPRPPCARTLRCG*AAHGTRGRRGCSGS
Trigger: GCTGCCGCTACAGCCACGACGACCCCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCAGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp GCCGCTGCACCTTCCAGTGCTCCGAGTAGTGGCCGAAAGCCATGCTaGGGCCGCCGGACACCACACGGAAGGAGGCGAAGGCCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: AAAPSSAPSSGRKPC*GRRTPHGRRRRPAG
Trigger: ACCGGCCGGCCTTCGCCTCCTTCCGTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCCACTACTCGGAGCACTGGAAGGTGCAGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GCCACCAGCTCGCGCGCCTCGCTCAGCACGTGGCCCTCGAGGACTTaGCGGCTGCGCGGCTGGCGCGTGAAGAAGTTGCGCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: ATSSRASLSTWPSRT*RLRGWRVKKLRIML
Trigger: CAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGCGCGCGAGCTGGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp TCAGCACGTGGCCCTCGAGGACTTGGCGGCTGCGCGGCTGGCGCGTaGAGAAGTTGCGCATCATGCTGTGGGCTGCGCGCCGCTGCACCT +
Preference number: 5 (lower is better)
Translates to: SARGPRGLGGCAAGA*RSCASCCGLRAAAP
Trigger: AGGTGCAGCGGCGCGCAGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp CGGGGTCGTCGTGGCTGTAGCGGCAGCCGAAACACACGGCACTCATaGCGTTGGCCACGGCCACGACGGTCAGCGGCCTCGGGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: RGRRGCSGSRNTRHS*RWPRPRRSAASGRG
Trigger: TCCTCGACCCGAGGCCGCTGACCGTCGTGGCCGTGGCCAACGTCATGAGTGCCGTGTGTTTCGGCTGCCGCTACAGCCACGACGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp CGGGTTACCTGTCGGCTGGCCCGGCCTCCATGGGCTTCCTTGGCCTaGAACAAAGCCCTGACGGGCGGCCCGCTTTTAGCGCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RVTCRLARPPWASLA*NKALTGGPLLAPGL
Trigger: CAGCCCTGGCGCTAAAAGCGGGCCGCCCGTCAGGGCTTTGTTCCAGGCCAAGGAAGCCCATGGAGGCCGGGCCAGCCGACAGGTAACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS CCA 90 bp GGTGTCCTGGCTGGCGCCGAAGCTGCGGGGAGGTGCGGTTTCCAGTaGCGCGGGACAGCCGGCTCCGAGAAGGAACTGGGACCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: GVLAGAEAAGRCGFQ*RGTAGSEKELGPLP
Trigger: AGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACCTCCCCGCAGCTTCGGCGCCAGCCAGGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613082.1
CDS CCA 90 bp CCCACTCGAGTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTGGATTaGGATGGGGACGGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PTRVSWRRQCQERLD*DGDGEGCLARRAPL
Trigger: CAGCGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 90 bp TCCAGTGGCGCGGGACAGCCGGCTCCGAGAAGGAACTGGGACCTTTaGCTAGGGCAAGACGTCAACAGGAACCCGCAGGCCCGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSGAGQPAPRRNWDL*LGQDVNRNPQARPG
Trigger: TCCAGGCCGGGCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 90 bp GCTGCGCGGCTGGCGCGTGAAGAAGTTGCGCATCATGCTGTGGGCTaGGCGCCGCTGCACCTTCCAGTGCTCCGAGTAGTGGCCGAAAGC +
Preference number: 5 (lower is better)
Translates to: AARLAREEVAHHAVG*APLHLPVLRVVAES
Trigger: GCTTTCGGCCACTACTCGGAGCACTGGAAGGTGCAGCGGCGCGCAGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp TGCTCGAATTCGCGGAAAACGGTGCGCACCGGGTTGGGGAAGTACTaGAGCCAGGGCATCACGTCCACCAGGCTGCCCGCGCCCACCGTG +
Preference number: 5 (lower is better)
Translates to: CSNSRKTVRTGLGKY*SQGITSTRLPAPTV
Trigger: CACGGTGGGCGCGGGCAGCCTGGTGGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp TCGAGTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTGGATTGGGATaGGGACGGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: SSLLASSVPGALGLG*GRRRVPRSPSPAAL
Trigger: AAGGGCAGCGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 90 bp CGAGTCTGCACATCAGGATACCTGGTGAAGAGGAGGAGCAGCCACTaGAGCGCGGTGGACAGGGTGTCCTGGCTGGCGCCGAAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RVCTSGYLVKRRSSH*SAVDRVSWLAPKLR
Trigger: CCGCAGCTTCGGCGCCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCTCTTCACCAGGTATCCTGATGTGCAGACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613082.1
CDS CCA 90 bp GGTGCGGTTTCCAGTGGCGCGGGACAGCCGGCTCCGAGAAGGAACTaGGACCTTTGCCTAGGGCAAGACGTCAACAGGAACCCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GAVSSGAGQPAPRRN*DLCLGQDVNRNPQA
Trigger: GGCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 90 bp TGCACAGTGGCCAGCACCGACAGGAGTAGCAGGAGCGTGGTCTGCTaGATGGACAGCGGGTTTAGCGGCCAAGGGTCGTTCGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: CTVASTDRSSRSVVC*MDSGFSGQGSFGLR
Trigger: CCTCAGCCCGAACGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGCCACTGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GGCCCACATGCACAGTGGCCAGCACCGACAGGAGTAGCAGGAGCGTaGTCTGCTGGATGGACAGCGGGTTTAGCGGCCAAGGGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: GPHAQWPAPTGVAGA*SAGWTAGLAAKGRS
Trigger: CGAACGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGCCACTGTGCATGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTGCCCTTGGGGACCTaGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATTGAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: GEGCLARRAPLPLGT*QSRGFLTALRLRLG
Trigger: CCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAGCGAGGCACCCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGTGGCCCTCGAGGACTaGGCGGCTGCGCGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHVALED*AAARLA
Trigger: CGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCAC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp CCGTGCTTAGTAGAGACCAACGTGGGCATCAGGGGGTCCGCTAACTaGGCCAAGCGCAGGGGCCAGAAACGTCTGCAGGCGCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PCLVETNVGIRGSAN*AKRRGQKRLQAPPG
Trigger: TCCAGGAGGCGCCTGCAGACGTTTCTGGCCCCTGCGCTTGGCTCAGTTAGCGGACCCCCTGATGCCCACGTTGGTCTCTACTAAGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 90 bp ACATGCACAGTGGCCAGCACCGACAGGAGTAGCAGGAGCGTGGTCTaGTGGATGGACAGCGGGTTTAGCGGCCAAGGGTCGTTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: TCTVASTDRSSRSVV*WMDSGFSGQGSFGL
Trigger: CAGCCCGAACGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGCCACTGTGCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp ATAGTGGCCGGTACGTTCTCCAAATCCAGCCGCGCGCCACCACCGTaGGAGTCCCCGGCCGCCTTCTTTTCCGCAGAGAGGATAAAGGCG +
Preference number: 5 (lower is better)
Translates to: IVAGTFSKSSRAPPP*ESPAAFFSAERIKA
Trigger: CGCCTTTATCCTCTCTGCGGAAAAGAAGGCGGCCGGGGACTCGCACGGTGGTGGCGCGCGGCTGGATTTGGAGAACGTACCGGCCACTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GTGAAGAGGAGGAGCAGCCACTGCAGCGCGGTGGACAGGGTGTCCTaGCTGGCGCCGAAGATGTCAGTGATAGTGGCCGGTACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VKRRSSHCSAVDRVS*LAPKMSVIVAGTFS
Trigger: GGAGAACGTACCGGCCACTATCACTGACATCTTCGGCGCCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCTCTTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp CGAGTCTGCACATCAGGATACCTGGTGAAGAGGAGGAGCAGCCACTaGAGCGCGGTGGACAGGGTGTCCTGGCTGGCGCCGAAGATGTCA +
Preference number: 5 (lower is better)
Translates to: RVCTSGYLVKRRSSH*SAVDRVSWLAPKMS
Trigger: TGACATCTTCGGCGCCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCTCTTCACCAGGTATCCTGATGTGCAGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp AGATTGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATGCCCTTaGGGCTCTCACAACTGGAGTCGCAGAAGCGCTCGCTCCCACTCC +
Preference number: 5 (lower is better)
Translates to: RLRLGVGEWRQFPCP*GSHNWSRRSARSHS
Trigger: GGAGTGGGAGCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS GCA 90 bp GCGTTGAGATTGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATaGCCTTGCGGCTCTCACAACTGGAGTCGCAGAAGCGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: ALRLRLGVGEWRQFP*PCGSHNWSRRSARS
Trigger: GGAGCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS CCA 90 bp CCTTTGCCTAGGGCAAGACGTCAACAGGAACCCGCAGGCCCGGCCTaGACACCTGCTGCCCTCACTGGAAGCTTTAACTCCCACTCGAGT +
Preference number: 5 (lower is better)
Translates to: PLPRARRQQEPAGPA*TPAALTGSFNSHSS
Trigger: ACTCGAGTGGGAGTTAAAGCTTCCAGTGAGGGCAGCAGGTGTCCAGGCCGGGCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACCGAGCCCCGCTGCCCTaGGGGACCTGGCAAAGTCGA +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDRAPLP*GTWQSR
Trigger: TCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCG...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GTCGGTGAGTGGCGTCAATTCCCATGCCCTTGCGGCTCTCACAACTaGAGTCGCAGAAGCGCTCGCTCCCACTCCCACTCCAGAGTCAAA +
Preference number: 5 (lower is better)
Translates to: VGEWRQFPCPCGSHN*SRRSARSHSHSRVK
Trigger: TTTGACTCTGGAGTGGGAGTGGGAGCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490576.1
ENST00000613082.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACACGGCACTCATGACGTaGGCCACGGCCACGACGGTC +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDTALMT*ATATTV
Trigger: GACCGTCGTGGCCGTGGCCAACGTCATGAGTGCCGT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACACGGTGCGCACCGGGTaGGGGAAGTACTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDTVRTG*GKYCSQ
Trigger: CTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp TCAGGGGGTCCGCTAACTGAGCCAAGCGCAGGGGCCAGAAACGTCTaGAGGCGCCTCCTGGATATCCCATCTGCCTTTCTGAATGCTACT +
Preference number: 5 (lower is better)
Translates to: SGGPLTEPSAGARNV*RRLLDIPSAFLNAT
Trigger: AGTAGCATTCAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGACGTTTCTGGCCCCTGCGCTTGGCTCAGTTAGCGGACCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 90 bp TCACTGGAAGCTTTAACTCCCACTCGAGTCTCTTGGCGTCGTCAGTaGCAGGAGCGCTTGGATTGGGATGGGGACGGAGAAGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SLEALTPTRVSWRRQ*QERLDWDGDGEGCL
Trigger: GAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGAGTTAAAGCTTCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 90 bp AGAAGCGCATGGCTTCATAAAGGAAGGCCAGGACATAGGGCAGGTTaGGCTGGTCACCCATACAAGGCAGACGGTCCCTCCCCACGACCT +
Preference number: 5 (lower is better)
Translates to: RSAWLHKGRPGHRAG*AGHPYKADGPSPRP
Trigger: AGGTCGTGGGGAGGGACCGTCTGCCTTGTATGGGTGACCAGCCCAACCTGCCCTATGTCCTGGCCTTCCTTTATGAAGCCATGCGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 90 bp CGAGGTTTCCTCACAGCGTTGAGATTGAGACTGGGGGTCGGTGAGTaGCGTCAATTCCCATGCCCTTGCGGCTCTCACAACTGGAGTCGC +
Preference number: 5 (lower is better)
Translates to: RGFLTALRLRLGVGE*RQFPCPCGSHNWSR
Trigger: GCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCCAGGAGCGCTTGGATaGGGATGGGGACGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHPGALG*GWGRRR
Trigger: CCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACCGCCCGAACTCTTCGTaGTGGCTGAGCAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDRPNSS*WLSSSR
Trigger: CCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCG...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp TTGGGCTGGTCACCCATACAAGGCAGACGGTCCCTCCCCACGACCTaGTCCAATTCTGCCTGCACTCGAGTCTGCACATCAGGATACCTG +
Preference number: 5 (lower is better)
Translates to: LGWSPIQGRRSLPTT*SNSACTRVCTSGYL
Trigger: CAGGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCTTGTATGGGTGACCAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS TCA 90 bp AAGTCGAGGTTTCCTCACAGCGTTGAGATTGAGACTGGGGGTCGGTaGGTGGCGTCAATTCCCATGCCCTTGCGGCTCTCACAACTGGAG +
Preference number: 5 (lower is better)
Translates to: KSRFPHSVEIETGGR*VASIPMPLRLSQLE
Trigger: CTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS GCA 90 bp ACCCATACAAGGCAGACGGTCCCTCCCCACGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCACATCAGGATACCTGGTGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: THTRQTVPPHDLIQF*LHSSLHIRIPGEEE
Trigger: CTCCTCTTCACCAGGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCTTGTATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACGCAGGCTCATTTGGGTaGGCCCTGAAATCGCACTGG +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHAGSFG*ALKSHW
Trigger: CCAGTGCGATTTCAGGGCCAACCCAAATGAGCCTGC...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp TTGGGCTGGTCACCCATACAAGGCAGACGGTCCCTCCCCACGACCTaGTCCAATTCTGCCTGCACTCGAGTCTGCACATCAGGATACTTT +
Preference number: 5 (lower is better)
Translates to: LGWSPIQGRRSLPTT*SNSACTRVCTSGYF
Trigger: AAAGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCTTGTATGGGTGACCAGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 90 bp ACCCATACAAGGCAGACGGTCCCTCCCCACGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCACATCAGGATACCTGATGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: THTRQTVPPHDLIQF*LHSSLHIRIPDVAA
Trigger: AGCTGCAACATCAGGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCTTGTATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGCTGGTCAGGTCCTaGTTGATGAGGCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHLLVRS*LMRPSL
Trigger: CAAGGATGGCCTCATCAACAAGGACCTGACCAGCAG...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTTGCTGAAGTTGCGGTaGAGCTGCTCGAATTCGCGG +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHLLKLR*SCSNSR
Trigger: CCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp CTCAAGAACTTGTCCAGGATGAAGTTGCTGAAGTTGCGGTTGAGCTaGTCGAATTCGCGGAAAACGGTGCGCACCGGGTTGGGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: LKNLSRMKLLKLRLS*SNSRKTVRTGLGKY
Trigger: GTACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAAGGAACTGGGACCTTaGCCTAGGGCAAGACGTCAA +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDKELGP*PRARRQ
Trigger: TTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCACGGCACTCATGACGTaGGCCACGGCCACGACGGTC +
Preference number: 5 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLTALMT*ATATTV
Trigger: GACCGTCGTGGCCGTGGCCAACGTCATGAGTGCCGT...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCGCCCGAACTCTTCGTaGTGGCTGAGCAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRRPNSS*WLSSSR
Trigger: CCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 90 bp CGCAGGGGCCAGAAACGTCTGCAGGCGCCTCCTGGATATCCCATCTaGCTTTCTGAATGCTACTCTGCTTTCGTAAAAGTGACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRGQKRLQAPPGYPI*LSECYSAFVKVTAS
Trigger: AGAAGCAGTCACTTTTACGAAAGCAGAGTAGCATTCAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGACGTTTCTGGCCCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACTTGATGAGGCCATCCTaGTCCAAGAATCGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDLMRPS*SKNRAG
Trigger: TCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAA...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCTCCCACTCGAGTCTCTaGGCGTCGTCAGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRSHSSL*ASSVPG
Trigger: TCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGA...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTTCACAGACCACTGGTaGACAAAAACCACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHFTDHW*TKTTVS
Trigger: GGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAG +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLTALR*RLGVGE
Trigger: CTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTCTGGTCAGGTCCTTGTaGATGAGGCCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: THEEPLGMEHTSPDGQLILVRSL*MRPSLS
Trigger: GGACAAGGATGGCCTCATCAACAAGGACCTGACCAG...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATCCCACTCGAGTCTCTaGGCGTCGTCAGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKSHSSL*ASSVPG
Trigger: TCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp TTCTGGTCTTTATCTTTTCCCTTATCACCTTCAATCACACACTTTACACTGAAAGTGGCCCTCGAGGACTaGGCGGCTGCGCGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: FWSLSFPLSPSITHFTLKVALED*AAARLA
Trigger: CGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCAC...TTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAAAGATAAAGACCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS TCA 90 bp CGAGCTGGATCAAAGTTCTCCGGGTTAGGCCACTTCAGTGGGTCATaGTTCACAGACCACTGGTTGACAAAAACCACAGTGTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RAGSKFSGLGHFSGS*FTDHWLTKTTVSLG
Trigger: TCCCAAGGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAATCATGACCCACTGAAGTGGCCTAACCCGGAGAACTTTGATCCAGCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp GGTCAGGTCCTTGTTGATGAGGCCATCCTTGTCCAAGAATCGAGCTaGATCAAAGTTCTCCGGGTTAGGCCACTTCAGTGGGTCATGATT +
Preference number: 5 (lower is better)
Translates to: GQVLVDEAILVQESS*IKVLRVRPLQWVMI
Trigger: AATCATGACCCACTGAAGTGGCCTAACCCGGAGAACTTTGATCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAACAAGGACCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCGGTTTCCTCACAGCGTaGAGATTGAGACTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRGFLTA*RLRLGV
Trigger: GACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACC...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCCTGGTCAGGTCCTTGTaGATGAGGCCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRLVRSL*MRPSLS
Trigger: GGACAAGGATGGCCTCATCAACAAGGACCTGACCAG...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGACGGTGCGCACCGGGTaGGGGAAGTACTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQTVRTG*GKYCSQ
Trigger: CTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGT...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAAGGTTTCCTCACAGCGTaGAGATTGAGACTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKGFLTA*RLRLGV
Trigger: GACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACC...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCCTGCTGGTCAGGTCCTaGTTGATGAGGCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLLLVRS*LMRPSL
Trigger: CAAGGATGGCCTCATCAACAAGGACCTGACCAGCAG...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCCGAGCCCCGCTGCCCTaGGGGACCTGGCAAAGTCGA +
Preference number: 5 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVRAPLP*GTWQSR
Trigger: TCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCG...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCCAGGAGCGCTTGGATaGGGATGGGGACGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQPGALG*GWGRRR
Trigger: CCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATTGCTGAAGTTGCGGTaGAGCTGCTCGAATTCGCGG +
Preference number: 5 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKLLKLR*SCSNSR
Trigger: CCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 90 bp CCAGAAACGTCTGCAGGCGCCTCCTGGATATCCCATCTGCCTTTCTaGATGCTACTCTGCTTTCGTAAAAGTGACTGCTTCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PETSAGASWISHLPF*MLLCFRKSDCFLSS
Trigger: AGAAGACAAGAAGCAGTCACTTTTACGAAAGCAGAGTAGCATTCAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGACGTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS CCA 90 bp CAAGAATCGAGCTGGATCAAAGTTCTCCGGGTTAGGCCACTTCAGTaGGTCATGATTCACAGACCACTGGTTGACAAAAACCACAGTGTC +
Preference number: 5 (lower is better)
Translates to: QESSWIKVLRVRPLQ*VMIHRPLVDKNHSV
Trigger: GACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAATCATGACCCACTGAAGTGGCCTAACCCGGAGAACTTTGATCCAGCTCGATTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCTGGTCAGGTCCTTGTaGATGAGGCCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFLVRSL*MRPSLS
Trigger: GGACAAGGATGGCCTCATCAACAAGGACCTGACCAG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCCTGCTGGTCAGGTCCTaGTTGATGAGGCCATCCTTG +
Preference number: 5 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFLLVRS*LMRPSL
Trigger: CAAGGATGGCCTCATCAACAAGGACCTGACCAGCAG...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCGCAGGCTCATTTGGGTaGGCCCTGAAATCGCACTGG +
Preference number: 5 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAAGSFG*ALKSHW
Trigger: CCAGTGCGATTTCAGGGCCAACCCAAATGAGCCTGC...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACTCTCTGAGAGTGACATaGACTTTAAATGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDSLRVT*TLNDLG
Trigger: ACCCAAGTCATTTAAAGTCAATGTCACTCTCAGAGA...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCTTGATGAGGCCATCCTaGTCCAAGAATCGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLLMRPS*SKNRAG
Trigger: TCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAA...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAG +
Preference number: 5 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQLTALR*RLGVGE
Trigger: CTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAG...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTAGCAGGCTCATTTGGGTaGGCCCTGAAATCGCACTGG +
Preference number: 5 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVAGSFG*ALKSHW
Trigger: CCAGTGCGATTTCAGGGCCAACCCAAATGAGCCTGC...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTATTGGCAAGTTTCCTaGGCTTGTAAATTTTGGACA +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHYWQVS*ACKFWT
Trigger: TGTCCAAAATTTACAAGCCAAGGAAACTTGCCAATA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp GAGACCAATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCAAGGAACTGGGACCTTaGCCTAGGGCAAGACGTCAA +
Preference number: 5 (lower is better)
Translates to: ETNLGFPPKMAWLPKYCFKELGP*PRARRQ
Trigger: TTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTT...GAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATTGGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp GGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACGCATGAAGTTGCTGAAGTaGCGGTTGAGCTGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: GMEHTSPDGQLIYAHLKRMKLLK*RLSCSN
Trigger: ATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCAT...GCGTTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAACAGTGCCTCAAGAACTaGTCCAGGATGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKQCLKN*SRMKLL
Trigger: CAGCAACTTCATCCTGGACAAGTTCTTGAGGCACTG...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTCCTGCATAGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACTCATTTTTAGCACACTaGGTTGCGTTAGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: LLHSPLLMKNRWVWSTPHSFLAH*VALVVL
Trigger: AAGTACAACTAACGCAACCAAGTGTGCTAAAAATGA...GTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCTATGCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp AGCCCACTACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACATGCATACATTTCATTaGAGCTTTATGCTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SPLLMKNRWVWSTPHLMDMHTFH*SFMLSQ
Trigger: CTGGGAAAGCATAAAGCTCAAATGAAATGTATGCAT...GTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGTAGTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS TCA 90 bp TTCATTTTCGCAGGCTCATTTGGGTTGGCCCTGAAATCGCACTGGTaGGCCAGGATGGAGATGAAGAGAAAAAGCTGCATCTTAGAAAGT +
Preference number: 5 (lower is better)
Translates to: FIFAGSFGLALKSHW*ARMEMKRKSCILES
Trigger: ACTTTCTAAGATGCAGCTTTTTCTCTTCATCTCCATCCTGGCTCACCAGTGCGATTTCAGGGCCAACCCAAATGAGCCTGCGAAAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp CTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATGCTCACCTTAAATTCACAGACCACTGGTaGACAAAAACCACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LGMEHTSPDGQLIYAHLKFTDHW*TKTTVS
Trigger: GGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAA...TTTAAGGTGAGCATAAATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTGTGGGGCATAATATTTaGGAATGGCAAGTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIVGHNI*EWQVPK
Trigger: TTTTGGCACTTGCCATTCCAAAATATTATGCCCCAC...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAAACACAGCTTTCCTTTaGCCGCAAGCATCTGATGAC +
Preference number: 5 (lower is better)
Translates to: INTAFLLPQASDDDWAYINTAFL*PQASDD
Trigger: GTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTT...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATCAATTCCCATGCCCTaGCGGCTCTCACAACTGGAG +
Preference number: 5 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVSIPMP*RLSQLE
Trigger: CTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTCTCTGAGAGTGACATaGACTTTAAATGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: THEEPLGMEHTSPDGQLISLRVT*TLNDLG
Trigger: ACCCAAGTCATTTAAAGTCAATGTCACTCTCAGAGA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 90 bp TTGCCTCTTGCTTCTTATTGGCAAGTTTCCTTGGCTTGTAAATTTTaGACAGCACTATCAAGGAGCTCCATGGACTCTCTGAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: LPLASYWQVSLACKF*TALSRSSMDSLRVT
Trigger: TGTCACTCTCAGAGAGTCCATGGAGCTCCTTGATAGTGCTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAATAAGAAGCAAGAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp ACTCATGAAGAACCGCTGGGTATGGAGCACACCTCACCTGATGGACAGTTGATTTATTGGCAAGTTTCCTaGGCTTGTAAATTTTGGACA +
Preference number: 5 (lower is better)
Translates to: THEEPLGMEHTSPDGQLIYWQVS*ACKFWT
Trigger: TGTCCAAAATTTACAAGCCAAGGAAACTTGCCAATA...AATCAACTGTCCATCAGGTGAGGTGTGCTCCATACCCAGCGGTTCTTCATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS-3UTR CAA 90 bp AAGAGAAACTTGGTCAGTTGTAATGGGAGTTCTGTCCCCAACTCTTGTCACCTCGTTTGGTGTAAGTGTTaGGGTGTATGTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: KRNLVSCNGSSVPNSCHLVWCKC*GVCVYM
Trigger: CATATAGACACATACACCCAAACACTTACACCAAAC...GAGGTGACAAGAGTTGGGGACAGAACTCCCATTACAACTGACCAAGTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCTTCTGTCCCCAACTCTaGTCACCTCGTAAAAAGAAC +
Preference number: 5 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAFCPQL*SPRKKN
Trigger: GTTCTTTTTACGAGGTGACAAGAGTTGGGGACAGAA...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp CTGGTTACCAAAATACTGCTTCATTCAGTAGTTTGGTGTAAGTGTTTGGGTGTATTCACAGACCACTGGTaGACAAAAACCACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LVTKILLHSVVWCKCLGVFTDHW*TKTTVS
Trigger: GGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAA...TACACCCAAACACTTACACCAAACTACTGAATGAAGCAGTATTTTGGTAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp ATAAACACAGCTTTCCTTTTGCCGCAAGCATCTGATGACGACTGGGCCTACATAATTTTCCATTATTCATaGGGCAGACACAGCTTAGAT +
Preference number: 5 (lower is better)
Translates to: INTAFLLPQASDDDWAYIIFHYS*GRHSLD
Trigger: ATCTAAGCTGTGTCTGCCCAATGAATAATGGAAAAT...TATGTAGGCCCAGTCGTCATCAGATGCTTGCGGCAAAAGGAAAGCTGTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTTCACTGTCTCAGCCTaGGTGGGGCATAATATTTTG +
Preference number: 5 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQFTVSA*VGHNIL
Trigger: CAAAATATTATGCCCCACCAAGGCTGAGACAGTGAA...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp TTTGTCTATTTCTGCATATGGGAGACCAATCTTGGATTCCCACCAAAAATGGCCGTTTGGTGTAAGTGTTaGGGTGTATGTGTCTATATG +
Preference number: 5 (lower is better)
Translates to: FVYFCIWETNLGFPPKMAVWCKC*GVCVYM
Trigger: CATATAGACACATACACCCAAACACTTACACCAAAC...GGCCATTTTTGGTGGGAATCCAAGATTGGTCTCCCATATGCAGAAATAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp TCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGTATCTCTGAGAGTGACATaGACTTTAAATGACTTGGGT +
Preference number: 5 (lower is better)
Translates to: SWIPTKNGLVTKILLHSVSLRVT*TLNDLG
Trigger: ACCCAAGTCATTTAAAGTCAATGTCACTCTCAGAGA...TACTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494864.1
ENST00000610745.5
CDS-3UTR CAA 90 bp AATCTTGGATTCCCACCAAAAATGGCCTGGTTACCAAAATACTGCTTCATTCAGGAGATTCGCCAAAATTaGAGTGAAGAAAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: NLGFPPKMAWLPKYCFIQEIRQN*SEEKKP
Trigger: GGGTTTCTTTTCTTCACTCAAATTTTGGCGAATCTC...CTGAATGAAGCAGTATTTTGGTAACCAGGCCATTTTTGGTGGGAATCCAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS-3UTR CAA 90 bp TTTCCCTTATCACCTTCAATCACACACTTTACACTGAAATTACTTGTCTCTGTCTCCCCAGAATGTACTTaGTCTACAACTATGCACTGT +
Preference number: 5 (lower is better)
Translates to: FPLSPSITHFTLKLLVSVSPECT*STTMHC
Trigger: ACAGTGCATAGTTGTAGACAAAGTACATTCTGGGGA...GACAGAGACAAGTAATTTCAGTGTAAAGTGTGTGATTGAAGGTGATAAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS GCA 72 bp GGCCACGCAAACGGGCCCGGGGGCGCGGACCGGAGCTaGCGCCTCCGTTGCCTCAGCAGCCGCTGGCCCACA +
Preference number: 6 (lower is better)
Translates to: GHANGPGGADRS*RLRCLSSRWPT
Trigger: TGTGGGCCAGCGGCTGCTGAGGCAACGGAGGCGGCAGCTCCGGTCCGCGCCCCCGGGCCCGTTTGCGTGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp AGCCGCCTGGCCCACCGCCGCCGCGTTTCCGATCAGTaGCCACGCAAACGGGCCCGGGGGCGCGGACCGGAG +
Preference number: 6 (lower is better)
Translates to: SRLAHRRRVSDQ*PRKRARGRGPE
Trigger: CTCCGGTCCGCGCCCCCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCGGCGGCGGTGGGCCAGGCGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp AGCAGCGCCACCAGCTCGCGCGCCTCGCTCAGCACGTaGCCCTCGAGGACTTGGCGGCTGCGCGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: SSATSSRASLST*PSRTWRLRGWR
Trigger: GCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGCGCGCGAGCTGGTGGCGCTGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GCGAAGGCCGGCCGGTCGGCGAAGGCCGAGCCCTGCTaGACCAGGGCCTGGTGGATGGCGCGCTCGCCATTC +
Preference number: 6 (lower is better)
Translates to: AKAGRSAKAEPC*TRAWWMARSPF
Trigger: GAATGGCGAGCGCGCCATCCACCAGGCCCTGGTGCAGCAGGGCTCGGCCTTCGCCGACCGGCCGGCCTTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp TCGCGCGCCTCGCTCAGCACGTGGCCCTCGAGGACTTaGCGGCTGCGCGGCTGGCGCGTGAAGAAGTTGCGC +
Preference number: 6 (lower is better)
Translates to: SRASLSTWPSRT*RLRGWRVKKLR
Trigger: GCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGCGCGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp GGCCCTCGAGGACTTGGCGGCTGCGCGGCTGGCGCGTaGAGAAGTTGCGCATCATGCTGTGGGCTGCGCGCC +
Preference number: 6 (lower is better)
Translates to: GPRGLGGCAAGA*RSCASCCGLRA
Trigger: GGCGCGCAGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp GCTGGCGCCGAAGCTGCGGGGAGGTGCGGTTTCCAGTaGCGCGGGACAGCCGGCTCCGAGAAGGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: AGAEAAGRCGFQ*RGTAGSEKELG
Trigger: TCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACCTCCCCGCAGCTTCGGCGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613082.1
CDS CAA 90 bp CGCCACCAGCTCGCGCGCCTCGCTCAGCACGTGGCCCTCGAGGACTaGGCGGCTGCGCGGCTGGCGCGTGAAGAAGTTGCGCATCATGCT +
Preference number: 6 (lower is better)
Translates to: RHQLARLAQHVALED*AAARLAREEVAHHA
Trigger: AGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCTGAGCGAGGCGCGCGAGCTGGTGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CAA 90 bp TGGCCCTCGAGGACTTGGCGGCTGCGCGGCTGGCGCGTGAAGAAGTaGCGCATCATGCTGTGGGCTGCGCGCCGCTGCACCTTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: WPSRTWRLRGWRVKK*RIMLWAARRCTFQC
Trigger: GCACTGGAAGGTGCAGCGGCGCGCAGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp GCTGGTGCCCATGCTGCGGGGAGGTGCGGTTTCCAGTaGCGCGGGACAGCCGGCTCCGAGAAGGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: AGAHAAGRCGFQ*RGTAGSEKELG
Trigger: TCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGAAACCGCACCTCCCCGCAGCATGGGCACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610745.5
CDS CCA 72 bp CTGCCCGCGCCCACCGTGCGCCCGAACTCTTCGTTGTaGCTGAGCAGCTCACGGAACTCGGGGTCGTCGTGG +
Preference number: 6 (lower is better)
Translates to: LPAPTVRPNSSL*LSSSRNSGSSW
Trigger: CCACGACGACCCCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp AGGCTGCCCGCGCCCACCGTGCGCCCGAACTCTTCGTaGTGGCTGAGCAGCTCACGGAACTCGGGGTCGTCG +
Preference number: 6 (lower is better)
Translates to: RLPAPTVRPNSS*WLSSSRNSGSS
Trigger: CGACGACCCCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp CGTGGCTGTAGCGGCAGCCGAAACACACGGCACTCATaGCGTTGGCCACGGCCACGACGGTCAGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: RGCSGSRNTRHS*RWPRPRRSAAS
Trigger: CGAGGCCGCTGACCGTCGTGGCCGTGGCCAACGTCATGAGTGCCGTGTGTTTCGGCTGCCGCTACAGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp CCGCGCCCACCGTGCGCCCGAACTCTTCGTTGTGGCTaGGCAGCTCACGGAACTCGGGGTCGTCGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PRPPCARTLRCG*AAHGTRGRRGC
Trigger: ACAGCCACGACGACCCCGAGTTCCGTGAGCTGCTCAGCCACAACGAAGAGTTCGGGCGCACGGTGGGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp TGGACAGCGGGTTTAGCGGCCAAGGGTCGTTCGGGCTaGGGCTGGTGCCCATGTGACCTGCGGGGAGGTGCG +
Preference number: 6 (lower is better)
Translates to: WTAGLAAKGRSG*GWCPCDLRGGA
Trigger: CGCACCTCCCCGCAGGTCACATGGGCACCAGCCTCAGCCCGAACGACCCTTGGCCGCTAAACCCGCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614273.1
CDS GCA 72 bp GGGACGGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTaGCCTTGGGGACCTGGCAAAGTCGAGGTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: GTEKGASLAEPR*PWGPGKVEVSS
Trigger: TGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 72 bp TCGCGGAAAACGGTGCGCACCGGGTTGGGGAAGTACTaGAGCCAGGGCATCACGTCCACCAGGCTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SRKTVRTGLGKY*SQGITSTRLPA
Trigger: CGCGGGCAGCCTGGTGGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp TTGGCGTCGTCAGTGCCAGGAGCGCTTGGATTGGGATaGGGACGGAGAAGGGTGCCTCGCTCGCCGAGCCCC +
Preference number: 6 (lower is better)
Translates to: LASSVPGALGLG*GRRRVPRSPSP
Trigger: GGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 72 bp GGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTGCCCTaGGGGACCTGGCAAAGTCGAGGTTTCCTCACAGCG +
Preference number: 6 (lower is better)
Translates to: GEGCLARRAPLP*GTWQSRGFLTA
Trigger: CGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAGCGAGGCACCCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 90 bp TCTGTGCGGGTTACCTGTCGGCTGGCCCGGCCTCCATGGGCTTCCTaGGCCTGGAACAAAGCCCTGACGGGCGGCCCGCTTTTAGCGCCA +
Preference number: 6 (lower is better)
Translates to: SVRVTCRLARPPWAS*AWNKALTGGPLLAP
Trigger: TGGCGCTAAAAGCGGGCCGCCCGTCAGGGCTTTGTTCCAGGCCAAGGAAGCCCATGGAGGCCGGGCCAGCCGACAGGTAACCCGCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS CAA 90 bp TCCCACTCGAGTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTGGATaGGGATGGGGACGGAGAAGGGTGCCTCGCTCGCCGAGCCCCGCT +
Preference number: 6 (lower is better)
Translates to: SHSSLLASSVPGALG*GWGRRRVPRSPSPA
Trigger: AGCGGGGCTCGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 90 bp TTCCAGTGGCGCGGGACAGCCGGCTCCGAGAAGGAACTGGGACCTTaGCCTAGGGCAAGACGTCAACAGGAACCCGCAGGCCCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: FQWRGTAGSEKELGP*PRARRQQEPAGPAW
Trigger: CCAGGCCGGGCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 72 bp CCTTCCAGTGCTCCGAGTAGTGGCCGAAAGCCATGCTaGGGCCGCCGGACACCACACGGAAGGAGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: PSSAPSSGRKPC*GRRTPHGRRRR
Trigger: CCTTCGCCTCCTTCCGTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCCACTACTCGGAGCACTGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GCACCTTCCAGTGCTCCGAGTAGTGGCCGAAAGCCATaGTGCGGCCGCCGGACACCACACGGAAGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: APSSAPSSGRKP*CGRRTPHGRRR
Trigger: TCGCCTCCTTCCGTGTGGTGTCCGGCGGCCGCAGCATGGCTTTCGGCCACTACTCGGAGCACTGGAAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GGAAGTACTGCAGCCAGGGCATCACGTCCACCAGGCTaGCCGCGCCCACCGTGCGCCCGAACTCTTCGTTGT +
Preference number: 6 (lower is better)
Translates to: GSTAARASRPPG*PRPPCARTLRC
Trigger: ACAACGAAGAGTTCGGGCGCACGGTGGGCGCGGGCAGCCTGGTGGACGTGATGCCCTGGCTGCAGTACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GGTACGTTCTCCAAATCCAGCCGCGCGCCACCACCGTaGGAGTCCCCGGCCGCCTTCTTTTCCGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GTFSKSSRAPPP*ESPAAFFSAER
Trigger: CCTCTCTGCGGAAAAGAAGGCGGCCGGGGACTCGCACGGTGGTGGCGCGCGGCTGGATTTGGAGAACGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp GAGAAGGGTGCCTCGCTCGCCGAGCCCCGCTGCCCTTaGGGACCTGGCAAAGTCGAGGTTTCCTCACAGCGT +
Preference number: 6 (lower is better)
Translates to: EKGASLAEPRCP*GPGKVEVSSQR
Trigger: ACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAGCGAGGCACCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp AGCACGTGGCCCTCGAGGACTTGGCGGCTGCGCGGCTaGCGCGTGAAGAAGTTGCGCATCATGCTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: STWPSRTWRLRG*RVKKLRIMLWA
Trigger: AGCCCACAGCATGATGCGCAACTTCTTCACGCGCCAGCCGCGCAGCCGCCAAGTCCTCGAGGGCCACGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GTGGCCAGCACCGACAGGAGTAGCAGGAGCGTGGTCTaGTGGATGGACAGCGGGTTTAGCGGCCAAGGGTCG +
Preference number: 6 (lower is better)
Translates to: VASTDRSSRSVV*WMDSGFSGQGS
Trigger: CGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp GCGGGACAGCCGGCTCCGAGAAGGAACTGGGACCTTTaGCTAGGGCAAGACGTCAACAGGAACCCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: AGQPAPRRNWDL*LGQDVNRNPQA
Trigger: GGCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 72 bp ACATCAGGATACCTGGTGAAGAGGAGGAGCAGCCACTaGAGCGCGGTGGACAGGGTGTCCTGGCTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: TSGYLVKRRSSH*SAVDRVSWLAP
Trigger: CGGCGCCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGCTGCTCCTCCTCTTCACCAGGTATCCTGATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp GCACCGACAGGAGTAGCAGGAGCGTGGTCTGCTGGATaGACAGCGGGTTTAGCGGCCAAGGGTCGTTCGGGC +
Preference number: 6 (lower is better)
Translates to: APTGVAGAWSAG*TAGLAAKGRSG
Trigger: GCCCGAACGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp CCTGGTGGATGGCGCGCTCGCCATTCAGCACCACTATaGGGCAGCTGCCCAGGCGGATCTGGAAAACGTCGC +
Preference number: 6 (lower is better)
Translates to: PGGWRARHSAPL*GSCPGGSGKRR
Trigger: GCGACGTTTTCCAGATCCGCCTGGGCAGCTGCCCCATAGTGGTGCTGAATGGCGAGCGCGCCATCCACCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp GTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTGGATTaGGATGGGGACGGAGAAGGGTGCCTCGCTCGCCGA +
Preference number: 6 (lower is better)
Translates to: VSWRRQCQERLD*DGDGEGCLARR
Trigger: TCGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp AGGAGCAGCCACTGCAGCGCGGTGGACAGGGTGTCCTaGCTGGCGCCGAAGATGTCAGTGATAGTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: RSSHCSAVDRVS*LAPKMSVIVAG
Trigger: ACCGGCCACTATCACTGACATCTTCGGCGCCAGCCAGGACACCCTGTCCACCGCGCTGCAGTGGCTGCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp AGTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTGGATaGGGATGGGGACGGAGAAGGGTGCCTCGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: SLLASSVPGALG*GWGRRRVPRSP
Trigger: CGGCGAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 72 bp CGCGGGACAGCCGGCTCCGAGAAGGAACTGGGACCTTaGCCTAGGGCAAGACGTCAACAGGAACCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: RGTAGSEKELGP*PRARRQQEPAG
Trigger: GCCTGCGGGTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS TCA 72 bp GTAGAGACCAACGTGGGCATCAGGGGGTCCGCTAACTaGGCCAAGCGCAGGGGCCAGAAACGTCTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: VETNVGIRGSAN*AKRRGQKRLQA
Trigger: CGCCTGCAGACGTTTCTGGCCCCTGCGCTTGGCTCAGTTAGCGGACCCCCTGATGCCCACGTTGGTCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 72 bp CTGGGGGTCGGTGAGTGGCGTCAATTCCCATGCCCTTaGGGCTCTCACAACTGGAGTCGCAGAAGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: LGVGEWRQFPCP*GSHNWSRRSAR
Trigger: GCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS CCA 72 bp GCCAGCACCGACAGGAGTAGCAGGAGCGTGGTCTGCTaGATGGACAGCGGGTTTAGCGGCCAAGGGTCGTTC +
Preference number: 6 (lower is better)
Translates to: ASTDRSSRSVVC*MDSGFSGQGSF
Trigger: GAACGACCCTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp GCACAGTGGCCAGCACCGACAGGAGTAGCAGGAGCGTaGTCTGCTGGATGGACAGCGGGTTTAGCGGCCAAG +
Preference number: 6 (lower is better)
Translates to: AQWPAPTGVAGA*SAGWTAGLAAK
Trigger: CTTGGCCGCTAAACCCGCTGTCCATCCAGCAGACCACGCTCCTGCTACTCCTGTCGGTGCTGGCCACTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp TGCCTCGCTCGCCGAGCCCCGCTGCCCTTGGGGACCTaGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATTG +
Preference number: 6 (lower is better)
Translates to: CLARRAPLPLGT*QSRGFLTALRL
Trigger: CAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGGGGCTCGGCGAGCGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp CTCGAGTCTCTTGGCGTCGTCAGTGCCAGGAGCGCTTaGATTGGGATGGGGACGGAGAAGGGTGCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: LESLGVVSARSA*IGMGTEKGASL
Trigger: GAGCGAGGCACCCTTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 90 bp TTGCGGTTGAGCTGCTCGAATTCGCGGAAAACGGTGCGCACCGGGTaGGGGAAGTACTGCAGCCAGGGCATCACGTCCACCAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LRLSCSNSRKTVRTG*GKYCSQGITSTRLP
Trigger: GGGCAGCCTGGTGGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp TGGACAGCGGGTTTAGCGGCCAAGGGTCGTTCGGGCTaGGGCTGGTGCCCATGCTGGCAAAGTCGAGGTTTC +
Preference number: 6 (lower is better)
Translates to: WTAGLAAKGRSG*GWCPCWQSRGF
Trigger: GAAACCTCGACTTTGCCAGCATGGGCACCAGCCTCAGCCCGAACGACCCTTGGCCGCTAAACCCGCTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490576.1
CDS CCA 72 bp TGGCGTCAATTCCCATGCCCTTGCGGCTCTCACAACTaGAGTCGCAGAAGCGCTCGCTCCCACTCCCACTCC +
Preference number: 6 (lower is better)
Translates to: WRQFPCPCGSHN*SRRSARSHSHS
Trigger: GGAGTGGGAGTGGGAGCGAGCGCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS CCA 72 bp TCCAGTGGCGCGGGACAGCCGGCTCCGAGAAGGAACTaGGACCTTTGCCTAGGGCAAGACGTCAACAGGAAC +
Preference number: 6 (lower is better)
Translates to: SSGAGQPAPRRN*DLCLGQDVNRN
Trigger: GTTCCTGTTGACGTCTTGCCCTAGGCAAAGGTCCCAGTTCCTTCTCGGAGCCGGCTGTCCCGCGCCACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp GCTGCTCGAATTCGCGGAAAACGGTGCGCACCGGGTTaGGGAAGTACTGCAGCCAGGGCATCACGTCCACCA +
Preference number: 6 (lower is better)
Translates to: AARIRGKRCAPG*GSTAARASRPP
Trigger: TGGTGGACGTGATGCCCTGGCTGCAGTACTTCCCCAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp CCGCTAACTGAGCCAAGCGCAGGGGCCAGAAACGTCTaGAGGCGCCTCCTGGATATCCCATCTGCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PLTEPSAGARNV*RRLLDIPSAFL
Trigger: CAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGACGTTTCTGGCCCCTGCGCTTGGCTCAGTTAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS CAA 90 bp CCGCTGCCCTTGGGGACCTGGCAAAGTCGAGGTTTCCTCACAGCGTaGAGATTGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATGC +
Preference number: 6 (lower is better)
Translates to: PLPLGTWQSRGFLTA*RLRLGVGEWRQFPC
Trigger: GCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGGCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000613082.1
CDS GCA 72 bp TTGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATaGCCTTGCGGCTCTCACAACTGGAGTCGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: LRLGVGEWRQFP*PCGSHNWSRRS
Trigger: GCTTCTGCGACTCCAGTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS CAA 90 bp CCCTTGGGGACCTGGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: PLGTWQSRGFLTALR*RLGVGEWRQFPCPC
Trigger: GCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000613082.1
CDS CAA 90 bp TGGTGCCCATGCTGGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCATGCCCTTGC +
Preference number: 6 (lower is better)
Translates to: WCPCWQSRGFLTALR*RLGVGEWRQFPCPC
Trigger: GCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGCATGGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490576.1
CDS GCA 72 bp ATCTGGCAACCCGACACCAGGGACCTGTTGAATCCGTaGTTAGTAGAGACCAACGTGGGCATCAGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: IWQPDTRDLLNP*LVETNVGIRGS
Trigger: GGACCCCCTGATGCCCACGTTGGTCTCTACTAAGCACGGATTCAACAGGTCCCTGGTGTCGGGTTGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 72 bp GCTTTAACTCCCACTCGAGTCTCTTGGCGTCGTCAGTaGCAGGAGCGCTTGGATTGGGATGGGGACGGAGAA +
Preference number: 6 (lower is better)
Translates to: ALTPTRVSWRRQ*QERLDWDGDGE
Trigger: TTCTCCGTCCCCATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGAGTTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS GCA 72 bp AGGCAGACGGTCCCTCCCCACGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCACATCAGGATACCTGGT +
Preference number: 6 (lower is better)
Translates to: RQTVPPHDLIQF*LHSSLHIRIPG
Trigger: ACCAGGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CCA 72 bp CTCACAGCGTTGAGATTGAGACTGGGGGTCGGTGAGTaGCGTCAATTCCCATGCCCTTGCGGCTCTCACAAC +
Preference number: 6 (lower is better)
Translates to: LTALRLRLGVGE*RQFPCPCGSHN
Trigger: GTTGTGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS CAA 72 bp GCCCTCACTGGAAGCTTTAACTCCCACTCGAGTCTCTaGGCGTCGTCAGTGCCAGGAGCGCTTGGATTGGGA +
Preference number: 6 (lower is better)
Translates to: ALTGSFNSHSSL*ASSVPGALGLG
Trigger: TCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGAGTTAAAGCTTCCAGTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 90 bp CAGTGCCTCAAGAACTTGTCCAGGATGAAGTTGCTGAAGTTGCGGTaGAGCTGCTCGAATTCGCGGAAAACGGTGCGCACCGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: QCLKNLSRMKLLKLR*SCSNSRKTVRTGLG
Trigger: CCCCAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTTGAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp TTTCCTCACAGCGTTGAGATTGAGACTGGGGGTCGGTaGGTGGCGTCAATTCCCATGCCCTTGCGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: FPHSVEIETGGR*VASIPMPLRLS
Trigger: TGAGAGCCGCAAGGGCATGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000490576.1
ENST00000610745.5
ENST00000613082.1
CDS GCA 72 bp AGGCAGACGGTCCCTCCCCACGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCACATCAGGATACCTGAT +
Preference number: 6 (lower is better)
Translates to: RQTVPPHDLIQF*LHSSLHIRIPD
Trigger: ATCAGGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS CCA 72 bp CCCTCACTGGAAGCTTTAACTCCCACTCGAGTCTCTTaGCGTCGTCAGTGCCAGGAGCGCTTGGATTGGGAT +
Preference number: 6 (lower is better)
Translates to: PSLEALTPTRVS*RRQCQERLDWD
Trigger: ATCCCAATCCAAGCGCTCCTGGCACTGACGACGCCAAGAGACTCGAGTGGGAGTTAAAGCTTCCAGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610745.5
ENST00000613082.1
ENST00000614273.1
CDS CAA 72 bp TGCCCATGCTGGCAAAGTCGAGGTTTCCTCACAGCGTaGAGATTGAGACTGGGGGTCGGTGAGTGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: CPCWQSRGFLTA*RLRLGVGEWRQ
Trigger: TTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGCATGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490576.1
CDS CAA 72 bp TTGGGGACCTGGCAAAGTCGAGGTTTCCTCACAGCGTaGAGATTGAGACTGGGGGTCGGTGAGTGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: LGTWQSRGFLTA*RLRLGVGEWRQ
Trigger: TTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000613082.1
CDS CAA 90 bp CTTTCGCAGTGCCTCAAGAACTTGTCCAGGATGAAGTTGCTGAAGTaGCGGTTGAGCTGCTCGAATTCGCGGAAAACGGTGCGCACCGGG +
Preference number: 6 (lower is better)
Translates to: LSQCLKNLSRMKLLK*RLSCSNSRKTVRTG
Trigger: CCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTTGAGGCACTGCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS GCA 72 bp AGGCAGACGGTCCCTCCCCACGACCTGATCCAATTCTaGCTGCACTCGAGTCTGCACATCAGGATACTTTTC +
Preference number: 6 (lower is better)
Translates to: RQTVPPHDLIQF*LHSSLHIRILF
Trigger: GAAAAGTATCCTGATGTGCAGACTCGAGTGCAGGCAGAATTGGATCAGGTCGTGGGGAGGGACCGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS GCA 72 bp TTGTCCAGGATGAAGTTGCTGAAGTTGCGGTTGAGCTaGTCGAATTCGCGGAAAACGGTGCGCACCGGGTTG +
Preference number: 6 (lower is better)
Translates to: LSRMKLLKLRLS*SNSRKTVRTGL
Trigger: CAACCCGGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp TGCTGGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCA +
Preference number: 6 (lower is better)
Translates to: CWQSRGFLTALR*RLGVGEWRQFP
Trigger: TGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490576.1
CDS CAA 72 bp ACCTGGCAAAGTCGAGGTTTCCTCACAGCGTTGAGATaGAGACTGGGGGTCGGTGAGTGGCGTCAATTCCCA +
Preference number: 6 (lower is better)
Translates to: TWQSRGFLTALR*RLGVGEWRQFP
Trigger: TGGGAATTGACGCCACTCACCGACCCCCAGTCTCAATCTCAACGCTGTGAGGAAACCTCGACTTTGCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000613082.1
CDS CAA 90 bp GGCCGAAGGCTTTCGCAGTGCCTCAAGAACTTGTCCAGGATGAAGTaGCTGAAGTTGCGGTTGAGCTGCTCGAATTCGCGGAAAACGGTG +
Preference number: 6 (lower is better)
Translates to: GRRLSQCLKNLSRMK*LKLRLSCSNSRKTV
Trigger: CACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTTGAGGCACTGCGAAAGCCTTCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp ATAAAGAGCCTTTGGTACCGCAAGCCCTGTCATCTGTaGGTGTGGCACAGTGAAGGCCTGGAGAGTCATGAC +
Preference number: 6 (lower is better)
Translates to: IKSLWYRKPCHL*VWHSEGLESHD
Trigger: GTCATGACTCTCCAGGCCTTCACTGTGCCACACTCACAGATGACAGGGCTTGCGGTACCAAAGGCTCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491456.1
CDS TCA 72 bp GCAGGCTCATTTGGGTTGGCCCTGAAATCGCACTGGTaGGCCAGGATGGAGATGAAGAGAAAAAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: AGSFGLALKSHW*ARMEMKRKSCI
Trigger: GATGCAGCTTTTTCTCTTCATCTCCATCCTGGCTCACCAGTGCGATTTCAGGGCCAACCCAAATGAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp TTTTGCCAAATCTGGCAACCCGACACCAGGGACCTGTaGAATCCGTGCTTAGTAGAGACCAACGTGGGCATC +
Preference number: 6 (lower is better)
Translates to: FCQIWQPDTRDL*NPCLVETNVGI
Trigger: GATGCCCACGTTGGTCTCTACTAAGCACGGATTCAACAGGTCCCTGGTGTCGGGTTGCCAGATTTGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS CAA 72 bp ACTCTGCTGGTCAGGTCCTTGTTGATGAGGCCATCCTaGTCCAAGAATCGAGCTGGATCAAAGTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TLLVRSLLMRPS*SKNRAGSKFSG
Trigger: CCCGGAGAACTTTGATCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAACAAGGACCTGACCAGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp AAGAACTTGTCCAGGATGAAGTTGCTGAAGTTGCGGTaGAGCTGCTCGAATTCGCGGAAAACGGTGCGCACC +
Preference number: 6 (lower is better)
Translates to: KNLSRMKLLKLR*SCSNSRKTVRT
Trigger: GGTGCGCACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CCA 72 bp CTTGTTGATGAGGCCATCCTTGTCCAAGAATCGAGCTaGATCAAAGTTCTCCGGGTTAGGCCACTTCAGTGG +
Preference number: 6 (lower is better)
Translates to: LVDEAILVQESS*IKVLRVRPLQW
Trigger: CCACTGAAGTGGCCTAACCCGGAGAACTTTGATCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp TGCCTCAAGAACTTGTCCAGGATGAAGTTGCTGAAGTaGCGGTTGAGCTGCTCGAATTCGCGGAAAACGGTG +
Preference number: 6 (lower is better)
Translates to: CLKNLSRMKLLK*RLSCSNSRKTV
Trigger: CACCGTTTTCCGCGAATTCGAGCAGCTCAACCGCAACTTCAGCAACTTCATCCTGGACAAGTTCTTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610745.5
ENST00000614273.1
CDS CAA 90 bp AAAATCATCACTCTGCTGGTCAGGTCCTTGTTGATGAGGCCATCCTaGTCCAAGAATCGAGCTGGATCAAAGTTCTCCGGGTTAGGCCAC +
Preference number: 6 (lower is better)
Translates to: KIITLLVRSLLMRPS*SKNRAGSKFSGLGH
Trigger: GTGGCCTAACCCGGAGAACTTTGATCCAGCTCGATTCTTGGACAAGGATGGCCTCATCAACAAGGACCTGACCAGCAGAGTGATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp TCTGCAGGCGCCTCCTGGATATCCCATCTGCCTTTCTaGATGCTACTCTGCTTTCGTAAAAGTGACTGCTTC +
Preference number: 6 (lower is better)
Translates to: SAGASWISHLPF*MLLCFRKSDCF
Trigger: GAAGCAGTCACTTTTACGAAAGCAGAGTAGCATTCAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS TCA 72 bp GCCACTTCAGTGGGTCATGATTCACAGACCACTGGTTaGCAAAAACCACAGTGTCCTTGGGAATGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: ATSVGHDSQTTG*QKPQCPWECGS
Trigger: GCTACCACATTCCCAAGGACACTGTGGTTTTTGTCAACCAGTGGTCTGTGAATCATGACCCACTGAAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS TCA 72 bp TCTCCCCTCGTCACTGTGAGAGGTCTGGACTTCTTCTaGCATAAACAGCCTCCTTTCATCAAAGGATCGTGC +
Preference number: 6 (lower is better)
Translates to: SPLVTVRGLDFF*HKQPPFIKGSC
Trigger: GCACGATCCTTTGATGAAAGGAGGCTGTTTATGTCAGAAGAAGTCCAGACCTCTCACAGTGACGAGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494864.1
CDS GCA 72 bp CAGAAACGTCTGCAGGCGCCTCCTGGATATCCCATCTaGCTTTCTGAATGCTACTCTGCTTTCGTAAAAGTG +
Preference number: 6 (lower is better)
Translates to: QKRLQAPPGYPI*LSECYSAFVKV
Trigger: CACTTTTACGAAAGCAGAGTAGCATTCAGAAAGGCAGATGGGATATCCAGGAGGCGCCTGCAGACGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492443.1
CDS TCA 72 bp TCAAAGTTCTCCGGGTTAGGCCACTTCAGTGGGTCATaGTTCACAGACCACTGGTTGACAAAAACCACAGTG +
Preference number: 6 (lower is better)
Translates to: SKFSGLGHFSGS*FTDHWLTKTTV
Trigger: CACTGTGGTTTTTGTCAACCAGTGGTCTGTGAATCATGACCCACTGAAGTGGCCTAACCCGGAGAACTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000492443.1
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp ATTAATAGGAGCTGTAGTCTGGAAGATAAAGAGCCTTaGGTACCGCAAGCCCTGTCATCTGTGAGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: INRSCSLEDKEP*VPQALSSVSVA
Trigger: TGCCACACTCACAGATGACAGGGCTTGCGGTACCAAAGGCTCTTTATCTTCCAGACTACAGCTCCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491456.1
CDS CCA 72 bp GCTTCTTATTGGCAAGTTTCCTTGGCTTGTAAATTTTaGACAGCACTATCAAGGAGCTCCATGGACTCTCTG +
Preference number: 6 (lower is better)
Translates to: ASYWQVSLACKF*TALSRSSMDSL
Trigger: CAGAGAGTCCATGGAGCTCCTTGATAGTGCTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAATAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 72 bp CTATCAAGGAGCTCCATGGACTCTCTGAGAGTGACATaGACTTTAAATGACTTGGGTTTAATGGTTAGACCA +
Preference number: 6 (lower is better)
Translates to: LSRSSMDSLRVT*TLNDLGLMVRP
Trigger: TGGTCTAACCATTAAACCCAAGTCATTTAAAGTCAATGTCACTCTCAGAGAGTCCATGGAGCTCCTTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1
CDS CAA 90 bp CTCATCTCCGAAGATGTGAATATTTCTAAAATTTCAGCTTGCCTCTaGCTTCTTATTGGCAAGTTTCCTTGGCTTGTAAATTTTGGACAG +
Preference number: 6 (lower is better)
Translates to: LISEDVNISKISACL*LLIGKFPWLVNFGQ
Trigger: CTGTCCAAAATTTACAAGCCAAGGAAACTTGCCAATAAGAAGCAAGAGGCAAGCTGAAATTTTAGAAATATTCACATCTTCGGAGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494864.1
ENST00000610745.5
ENST00000614273.1