RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP1A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140465

Ensembl transcript IDs: ENST00000379727.8, ENST00000395048.6, ENST00000562201.5, ENST00000564596.5, ENST00000567032.5, ENST00000569630.5, ENST00000612821.4, ENST00000617691.4

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAGAGTTCTTCAGAGCTTCTCAGAGGC +
Preference number: 1 (lower is better)
Translates to: NLLKPVSTLTEPARY*AQGLPESSSELLRG
Trigger: GCCTCTGAGAAGCTCTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTaGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATC +
Preference number: 1 (lower is better)
Translates to: KAPSASMWPCFTCCL*RVCRGKSRVGAGRI
Trigger: GATCCTGCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 90 bp TCATCTGACAGCTGGACATTGGCGTTCTCATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCC +
Preference number: 1 (lower is better)
Translates to: SSDSWTLAFSSSCFS*QCSIRLSVMSRMWP
Trigger: GGGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
3UTR GCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTaGTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGGC +
Preference number: 1 (lower is better)
Translates to: VSMSFRLNLRPHRPA*WSGCPTRPGRQSLG
Trigger: GCCTAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR CCA 90 bp TCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGGCCTC +
Preference number: 1 (lower is better)
Translates to: SMSFRLNLRPHRPAC*SGCPTRPGRQSLGL
Trigger: GAGGCCTAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 90 bp TGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCC +
Preference number: 1 (lower is better)
Translates to: CQRLDRVLVWLVLTC*SQSAPSQSQLGTGP
Trigger: GGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR TCA 90 bp AAGGCAGCCCTGTTTGTTCCTGCCTGCAGGAAGGGCAGAGGAATGTaGTGTTCCCAGGAACTGTGTCCTAGACCCATAGGGTCAGATTGC +
Preference number: 1 (lower is better)
Translates to: KAALFVPACRKGRGM*CSQELCPRPIGSDC
Trigger: GCAATCTGACCCTATGGGTCTAGGACACAGTTCCTGGGAACATCACATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAGGGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CCA 90 bp CTCCTGGCTCAAGCACAACTTGGGAAGGCTCCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAG +
Preference number: 1 (lower is better)
Translates to: LLAQAQLGKAPSASM*PCFTCCLWRVCRGK
Trigger: CTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 90 bp TTGTACTGTTATCATCTGGATGTGCTCTTTATCTTCTTTCTATTATaGGGCCAGGAGATGAACTCTTTAACTCTTCCTGGCTCCCTCAGC +
Preference number: 1 (lower is better)
Translates to: LYCYHLDVLFIFFLL*GQEMNSLTLPGSLS
Trigger: GCTGAGGGAGCCAGGAAGAGTTAAAGAGTTCATCTCCTGGCCTCATAATAGAAAGAAGATAAAGAGCACATCCAGATGATAACAGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR-3UTR GCA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR GCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 2 (lower is better)
Translates to: GSISIYVALFYLLSLEGVASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 2 (lower is better)
Translates to: APSASMWPCFTCCLWRVCASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR CAA 90 bp ACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TWEGSISIYVALFYL*SLEGVQRQVQGRGR
Trigger: CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR GCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: APSASMWPCFTCCLWRVCACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp TCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 2 (lower is better)
Translates to: SKIGQGPGLASSNLLKPVASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...GACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 2 (lower is better)
Translates to: TTWEGSISIYVALFYLLSASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCCATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVHRPAC*SGCPTR
Trigger: TCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGCCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 2 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR TCA 90 bp CGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RSGRNSDGLTHSFWSWLISSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...GATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
3UTR-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKEPARY*AQGLPE
Trigger: CTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTC...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp TGTAACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTAAGAGCTTAAGAGGGTaGACCCAGCCTTTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: CNQRETAEVAVQGSEVSSKSLRG*TQPFLC
Trigger: GCAGAGGAAAGGCTGGGTCCACCCTCTTAAGCTCTT...ACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
3UTR CAA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGG +
Preference number: 2 (lower is better)
Translates to: QLSKIGQGPGLASSN*LKPVSTLTEPARYW
Trigger: CCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CAA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAG +
Preference number: 2 (lower is better)
Translates to: TLGSSQLSKIGQGPG*ASSNLLKPVSTLTE
Trigger: CTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR TCA 90 bp AACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: NPAPKRSKTMLMIFSSDSQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...GCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
3UTR-3UTR CCA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 2 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp AGCAGTTGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATCTCTCCATCCAGGTCTaGTCCTTCACTATTCCTAGC +
Preference number: 2 (lower is better)
Translates to: SSCDCVKPSSKEVQDDVNLSIQV*SFTIPS
Trigger: GCTAGGAATAGTGAAGGACCAGACCTGGATGGAGAG...ATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR-3UTR CCA 90 bp AACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 2 (lower is better)
Translates to: NPAPKRSKTMLMIFSSDSVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...GCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
3UTR-3UTR TCA 90 bp GGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTGCCACATCTTCTTTCTATTATaGGGCCAGGAGATGAACTCT +
Preference number: 2 (lower is better)
Translates to: GRNSDGLTHSFWSWLICHIFFLL*GQEMNS
Trigger: AGAGTTCATCTCCTGGCCTCATAATAGAAAGAAGAT...GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR-3UTR GCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR GCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR GCA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGGGACAGGAGGATCAATaGAATGATTGTATTAATCAT +
Preference number: 2 (lower is better)
Translates to: NQRETAEVAVQGSEVSSEGQEDQ*NDCINH
Trigger: ATGATTAATACAATCATTGCATTGATCCTCCTGTCC...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
3UTR-3UTR GCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACTGTTTGTTCCTGCCTaGAGGAAGGGCAGAGGAATG +
Preference number: 2 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRLFVPA*RKGRGM
Trigger: CATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACCAATTGTCAAAGATTaGACAGGGTCCTGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLPIVKD*TGSWFG
Trigger: GCCAAACCAGGACCCTGTCCAATCTTTGACAATTGG...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACACCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 2 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR GCA 72 bp GCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTaGGCTCTGATCCCCGCAGACACAAGTCCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: ALVLVPGYVHSL*ALIPADTSPQP
Trigger: GGGCTGGGGACTTGTGTCTGCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 3 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCCCCAATTGTCAAAGATaGGACAGGGTCCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: SPSPGAWICALPVRSDPRPNCQR*DRVLVW
Trigger: CCAAACCAGGACCCTGTCCAATCTTTGACAATTGGG...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CCA 72 bp AAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAGAGTTCTTCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: KPVSTLTEPARY*AQGLPESSSEL
Trigger: AAGCTCTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR GCA 72 bp AGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTaGTGGTCTGGCTGCCCAACCAGACCAGGTAGACAG +
Preference number: 3 (lower is better)
Translates to: SFRLNLRPHRPA*WSGCPTRPGRQ
Trigger: CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR CCA 72 bp TTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGT +
Preference number: 3 (lower is better)
Translates to: FRLNLRPHRPAC*SGCPTRPGRQS
Trigger: ACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 3 (lower is better)
Translates to: GSISIYVALFYLLSLEGVQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 72 bp AGCTGGACATTGGCGTTCTCATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTGTCTGTGATGTCCCGG +
Preference number: 3 (lower is better)
Translates to: SWTLAFSSSCFS*QCSIRLSVMSR
Trigger: CCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAGAACGCCAATGTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
3UTR CCA 72 bp CAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTaGCCCTTAGGTAGGGAAAGTCCACAGGTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: QCSIRLSVMSRM*PLGRESPQVSK
Trigger: CTTGCTCACCTGTGGACTTTCCCTACCTAAGGGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR-3UTR CAA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 3 (lower is better)
Translates to: EGSISIYVALFYLLSLEGQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 72 bp TTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGT +
Preference number: 3 (lower is better)
Translates to: LDRVLVWLVLTC*SQSAPSQSQLG
Trigger: ACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 3 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
3UTR TCA 72 bp GCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCTTCTCAAAGGTTTTGT +
Preference number: 3 (lower is better)
Translates to: AASPDSAQSGCL*CPGCGPSQRFC
Trigger: ACAAAACCTTTGAGAAGGGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
3UTR-3UTR CAA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTATGGCTCAAGCACAACTaGGGAAGGCTCCATCAGCAT +
Preference number: 3 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLWLKHN*GRLHQH
Trigger: ATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCA...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CCA 72 bp AACTGCCCCAGGGTCCTGCATGTAATGACTCTTCAGTaGCTATTGCTGTCTTCTCAAAGGTTTTGTAGTGCT +
Preference number: 3 (lower is better)
Translates to: NCPRVLHVMTLQ*LLLSSQRFCSA
Trigger: AGCACTACAAAACCTTTGAGAAGACAGCAATAGCCACTGAAGAGTCATTACATGCAGGACCCTGGGGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR-3UTR CAA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 3 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLGQGPG*ASSNLL
Trigger: CAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCC...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACTTGGCAGCTCCCAATaGTCAAAGATTGGACAGGGT +
Preference number: 3 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLLGSSQ*SKIGQG
Trigger: ACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAG...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR-3UTR CAA 90 bp ACATTTGACACACAGCGTCTTGTACTGTTATCATCTGGATGTGCTCTTTATCTTACTCTTCAGTGGCTATaGCTGTCTTCTCAAAGGTTT +
Preference number: 3 (lower is better)
Translates to: TFDTQRLVLLSSGCALYLTLQWL*LSSQRF
Trigger: AAACCTTTGAGAAGACAGCAATAGCCACTGAAGAGT...AAGATAAAGAGCACATCCAGATGATAACAGTACAAGACGCTGTGTGTCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
3UTR TCA 72 bp TATCATCTGGATGTGCTCTTTATCTTCTTTCTATTATaGGGCCAGGAGATGAACTCTTTAACTCTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: YHLDVLFIFFLL*GQEMNSLTLPG
Trigger: GCCAGGAAGAGTTAAAGAGTTCATCTCCTGGCCTCATAATAGAAAGAAGATAAAGAGCACATCCAGATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCCGCCCAGTGGCACGCTaGATTCCACCCGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRRPVAR*IPPVAA
Trigger: TGCTGCAACGGGTGGAATTCAGCGTGCCACTGGGCG...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTAACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTGGCTGCTGAGGTACTaGGCTGAGCTGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESWLLRY*AELGRV
Trigger: CACCCTTCCCAGCTCAGCTCAGTACCTCAGCAGCCA...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379727.8
CDS-3UTR TCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTAQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCACTCCCTGTGCGCTCTaGTCCCCGCAGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRTPCAL*SPQTQV
Trigger: GACTTGTGTCTGCGGGGATCAGAGCGCACAGGGAGT...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATACCCAGGGTCAGCATGTaGCCAATCAGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIPRVSM*PIRGQP
Trigger: GGGCTGGCCTCTGATTGGGCACATGCTGACCCTGGG...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTAAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCCATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRHRPAC*SGCPTR
Trigger: TCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTCATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESHRPAC*SGCPTR
Trigger: TCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTGATCTTGGAGGTGGCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESDLGGG*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGCCACCTCCAAGATC...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESLSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGCACCTTCACGCCCAGTaGCACGCTGAATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQHLHAQ*HAEFHP
Trigger: CGGGTGGAATTCAGCGTGCCACTGGGCGTGAAGGTG...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQEPARY*AQGLPE
Trigger: CTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTC...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCGCCCAGTGGCACGCTaGATTCCACCCGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRRPVAR*IPPVAA
Trigger: TGCTGCAACGGGTGGAATTCAGCGTGCCACTGGGCG...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAACTCCCTGTGCGCTCTaGTCCCCGCAGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLTPCAL*SPQTQV
Trigger: GACTTGTGTCTGCGGGGATCAGAGCGCACAGGGAGT...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGGATCTTGGAGGTGGCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQDLGGG*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGCCACCTCCAAGATC...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395048.6
ENST00000617691.4
CDS-3UTR GCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCTGTTTGTTCCTGCCTaGAGGAAGGGCAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTALFVPA*RKGRGM
Trigger: CATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAG...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGEPARY*AQGLPE
Trigger: CTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGGTGGCTGTAGGGGATaGAGCTGGAGCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGGGCRG*SWSLGP
Trigger: AGGACCCAGGCTCCAGCTCCATCCCCTACAGCCACC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR TCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCTCTCATTCAGGTCCTTaGAGGCATTCAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTASHSGP*RHSGKG
Trigger: ACCCTTCCCTGAATGCCTTCAAGGACCTGAATGAGA...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000617691.4
CDS-3UTR GCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQEPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCTGGACTCTTGGAGCCTaGGATCACAAGGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRWTLGA*DHKDQG
Trigger: TCCCTGATCCTTGTGATCCCAGGCTCCAAGAGTCCA...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCCCTCCCAGCGGGCAATaGTCTCACCGATACACTTCC +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGPPSGQ*SHRYTS
Trigger: GGAAGTGTATCGGTGAGACCATTGCCCGCTGGGAGG...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGAGCCAGCTAGGTACTaGGCCCAGGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVEPARY*AQGLPE
Trigger: CTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTC...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCTCTGTGCCAGTATCCTaGGCTGTCTCTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRSVPVS*AVSSLH
Trigger: GTGAAGGGAAGAGACAGCCCAGGATACTGGCACAGA...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACCGCCCAGTGGCACGCTaGATTCCACCCGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYRPVAR*IPPVAA
Trigger: TGCTGCAACGGGTGGAATTCAGCGTGCCACTGGGCG...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCACGCCCAGTGGCACGCTaGATTCCACCCGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPRPVAR*IPPVAA
Trigger: TGCTGCAACGGGTGGAATTCAGCGTGCCACTGGGCG...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAACTCCCTGTGCGCTCTaGTCCCCGCAGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVTPCAL*SPQTQV
Trigger: GACTTGTGTCTGCGGGGATCAGAGCGCACAGGGAGT...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGGCTGTCTGTGATGTCCCGGATGTGGCCCTTAGGTAGGGAAAGTCCACAGGTGGATCTTGGAGGTGGCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSVMSRMWPLGRESPQVDLGGG*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGCCACCTCCAAGATC...CACCTGTGGACTTTCCCTACCTAAGGGCCACATCCGGGACATCACAGACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATAGTGAGACTACCTCTGTaGCAGTATCCTGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIVRLPL*QYPGLS
Trigger: AGACAGCCCAGGATACTGGCACAGAGGTAGTCTCAC...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGCTGTTTGTTCCTGCCTaGAGGAAGGGCAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQLFVPA*RKGRGM
Trigger: CATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAG...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLLLTVLNQAVCDVPDVALSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...GGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATACCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGGATTCTTCAGGCCTTTaGGGACCTGAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQDSSGL*GPEVLR
Trigger: CCTCAAGACCTCAGGTCCCCAAAGGCCTGAAGAATC...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATAGATTCTTCAGGCCTTTaGGGACCTGAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIDSSGL*GPEVLR
Trigger: CCTCAAGACCTCAGGTCCCCAAAGGCCTGAAGAATC...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCTCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTGGTTAGCCCATAGATaGGGGTCATGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VSTLTEPARYWAQGLPESWLAHR*GSCPPS
Trigger: TGAAGGTGGACATGACCCCCATCTATGGGCTAACCA...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATAAGCAGGCATGCTTCATaGTTAGCCCATAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQISRHAS*LAHRWG
Trigger: CCCCCATCTATGGGCTAACCATGAAGCATGCCTGCT...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTACCTAGTCCTGGTGCCTaGATATGTGCACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLPSPGA*ICALPV
Trigger: CACAGGGAGTGCACATATCCAGGCACCAGGACTAGG...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTCTTGGAGGTGGCTGCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLASSNLLKPVSTLTEPALGGGC*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGCAGCCACCTCCAAG...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379727.8
CDS-3UTR TCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCGAGGTCTTGAGGCCCTaGTTACCCAGAATACCAGAC +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGEVLRP*LPRIPD
Trigger: GTCTGGTATTCTGGGTAATCAGGGCCTCAAGACCTC...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CTCATCCAGCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: LIQLLLLTVLNQAVCDVPRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...CGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp AGGCTGTCTGTGATGTCCCGGATGTGGCCCTTAGGTAGGGAAAGTCCACAGGTGTCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSVMSRMWPLGRESPQVSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...CACCTGTGGACTTTCCCTACCTAAGGGCCACATCCGGGACATCACAGACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTANDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR TCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCTCACTAAAAACACTCTaGGCCTCCCTTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTASLKTL*ASLFGG
Trigger: ACCTCCAAAAAGGGAGGCTCAGAGTGTTTTTAGTGA...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR TCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGACCAGAGGGAGACAGCTaGAGTGGCAGTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDRPEGDS*SGSSGL
Trigger: GAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGG...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGCCCAGGGTCAGCATGTaGCCAATCAGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVPRVSM*PIRGQP
Trigger: GGGCTGGCCTCTGATTGGGCACATGCTGACCCTGGG...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGREPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGEPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: NQRETAEVAVQGSEVSSEGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GLASSNLLKPVSTLTEPAACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCACCTTCACGCCCAGTaGCACGCTGAATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVHLHAQ*HAEFHP
Trigger: CGGGTGGAATTCAGCGTGCCACTGGGCGTGAAGGTG...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCACACCTTCACGCCCAGTaGCACGCTGAATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPHLHAQ*HAEFHP
Trigger: CGGGTGGAATTCAGCGTGCCACTGGGCGTGAAGGTG...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGAGCAGGCATGCTTCATaGTTAGCCCATAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQSRHAS*LAHRWG
Trigger: CCCCCATCTATGGGCTAACCATGAAGCATGCCTGCT...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGAGCGCAGCTGCATTTaGAAGTGCTCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGERSCI*KCSQQA
Trigger: TGCCTGCTGTGAGCACTTCCAAATGCAGCTGCGCTC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGGAGCGCAGCTGCATTTaGAAGTGCTCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRERSCI*KCSQQA
Trigger: TGCCTGCTGTGAGCACTTCCAAATGCAGCTGCGCTC...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGCCAGCCTGCTGGTCTaGCTGCCCAACCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLASLLV*LPNQTR
Trigger: CCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGC...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTAPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTCCTAGTCCTGGTGCCTaGATATGTGCACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAPSPGA*ICALPV
Trigger: CACAGGGAGTGCACATATCCAGGCACCAGGACTAGG...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGCCTAGTCCTGGTGCCTaGATATGTGCACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGPSPGA*ICALPV
Trigger: CACAGGGAGTGCACATATCCAGGCACCAGGACTAGG...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCCAGCTGTGGGACCATaGGCAAGTCCTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCPAVGP*ASPPLP
Trigger: GGGAAGAGGAGGACTTGCCCATGGTCCCACAGCTGG...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR TCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGGAGGTCTTGAGGCCCTaGTTACCCAGAATACCAGAC +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGREVLRP*LPRIPD
Trigger: GTCTGGTATTCTGGGTAATCAGGGCCTCAAGACCTC...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCGATGACATTGGTCACTaGTACCACCACATACCTGTA +
Preference number: 4 (lower is better)
Translates to: SPSPGAWICALPVRSDPRDDIGH*YHHIPV
Trigger: TACAGGTATGTGGTGGTATCAGTGACCAATGTCATC...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCACAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLASSNLLKPVSTLTEPAQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCCGCCCAGTGGCACGCTaGATTCCACCCGTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVRPVAR*IPPVAA
Trigger: TGCTGCAACGGGTGGAATTCAGCGTGCCACTGGGCG...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGCTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQLVLTC*SQSAPS
Trigger: TGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAG...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGACTCCCTGTGCGCTCTaGTCCCCGCAGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVTPCAL*SPQTQV
Trigger: GACTTGTGTCTGCGGGGATCAGAGCGCACAGGGAGT...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGCTGAATTCCACCCGTTaGAGCAGGATAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGLNSTR*SRIARK
Trigger: CTTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAG...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGGTGAGACTACCTCTGTaGCAGTATCCTGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRVRLPL*QYPGLS
Trigger: AGACAGCCCAGGATACTGGCACAGAGGTAGTCTCAC...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCLSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGCCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGATTCTTCAGGCCTTTaGGGACCTGAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGDSSGL*GPEVLR
Trigger: CCTCAAGACCTCAGGTCCCCAAAGGCCTGAAGAATC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCACCTTCACGCCCAGTaGCACGCTGAATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGHLHAQ*HAEFHP
Trigger: CGGGTGGAATTCAGCGTGCCACTGGGCGTGAAGGTG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTCATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSHRPAC*SGCPTR
Trigger: TCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCATAGGCCAGCCTGCTaGTCTGGCTGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGHRPAC*SGCPTR
Trigger: TCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCATGTAGGGGATGGAGCTaGAGCCTGGGTCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPCRGWS*SLGPEV
Trigger: GACTTCAGGACCCAGGCTCCAGCTCCATCCCCTACA...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567032.5
3UTR CAA 72 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYL*SLEGVQRQVQG
Trigger: ACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTTCTCATTCAGGTCCTTaGAGGCATTCAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLASHSGP*RHSGKG
Trigger: ACCCTTCCCTGAATGCCTTCAAGGACCTGAATGAGA...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000617691.4
CDS-3UTR TCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDRSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR TCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATAAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQINDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR TCA 90 bp ACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTACATACCTGAGGTACTaGGCTGAGCTGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TRGRQLKWQFRAQKCQVSTYLRY*AELGRV
Trigger: CACCCTTCCCAGCTCAGCTCAGTACCTCAGGTATGT...ACTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp GTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATGAAGCTCCCAGGGTCAGCATGTaGCCAATCAGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VALLKGFVVLLDHLLHEAPRVSM*PIRGQP
Trigger: GGGCTGGCCTCTGATTGGGCACATGCTGACCCTGGG...AGCTTCATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR GCA 90 bp CCGGATGTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PDVALLKGFVVLLDHLLHGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...ATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCACATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR GCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTTATGTGCACTCCCTGTaGGCTCTGATCCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCYVHSL*ALIPAD
Trigger: GTCTGCGGGGATCAGAGCGCACAGGGAGTGCACATA...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGAAGGGTGGACTCTTaGAGCCTGGGATCACAAGGA +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPGRVDS*SLGSQG
Trigger: TCCTTGTGATCCCAGGCTCCAAGAGTCCACCCTTCC...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp ACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TRGRQLKWQFRAQKCQVSGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...ACTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp CTCATCCAGCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGCCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: LIQLLLLTVLNQAVCDVPPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...CGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp ACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTTCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: TRGRQLKWQFRAQKCQVSSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...ACTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCTCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp GAGCTCCAGCCCCAAAGGATAGAGGACAGGCAAGCAGCCCATGGACAGGAGGATAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: ELQPQRIEDRQAAHGQEDRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...ATCCTCCTGTCCATGGGCTGCTTGCCTGTCCTCTATCCTTTGGGGCTGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCCTCCCAGCGGGCAATaGTCTCACCGATACACTTCC +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGPPSGQ*SHRYTS
Trigger: GGAAGTGTATCGGTGAGACCATTGCCCGCTGGGAGG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGCCTCCCAGCGGGCAATaGTCTCACCGATACACTTCC +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVPPSGQ*SHRYTS
Trigger: GGAAGTGTATCGGTGAGACCATTGCCCGCTGGGAGG...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGTGGTTAGCCCATAGATaGGGGTCATGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRWLAHR*GSCPPS
Trigger: TGAAGGTGGACATGACCCCCATCTATGGGCTAACCA...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAAGCAGGCATGCTTCATaGTTAGCCCATAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVSRHAS*LAHRWG
Trigger: CCCCCATCTATGGGCTAACCATGAAGCATGCCTGCT...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCCCAATTGTCAAAGATTaGACAGGGTCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGPIVKD*TGSWFG
Trigger: GCCAAACCAGGACCCTGTCCAATCTTTGACAATTGG...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTCTGGTACCAGCTGTaGGACCATGGGCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGVWYQL*DHGQVL
Trigger: GAGGACTTGCCCATGGTCCCACAGCTGGTACCAGAC...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR TCA 90 bp CGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSGRNSDGLTHSFWSWLIGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...GATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGATGACATTGGTCACTaGTACCACCACATACCTGTA +
Preference number: 4 (lower is better)
Translates to: NLLKPVSTLTEPARYWAQDDIGH*YHHIPV
Trigger: TACAGGTATGTGGTGGTATCAGTGACCAATGTCATC...CTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CCGGATGTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATCAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PDVALLKGFVVLLDHLLHQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...ATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCACATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR TCA 90 bp GTGAGAAACCGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCACAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VRNRSGRNSDGLTHSFWSQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACGGTTTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTTCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAAAGGGCAGAGGAATGTaGTGTTCCCAGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVKGRGM*CSQELC
Trigger: ACACAGTTCCTGGGAACATCACATTCCTCTGCCCTT...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGTAACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTCTCAGAAGTGTCAAGTaGGTGGAGCTCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CNQRETAEVAVQGSEVSSLRSVK*VELQPQ
Trigger: TTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAG...ACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp CAACTGCCCCAGGGTCCTGCATGTAATGACTCTTCAGTGGCTATTGCTGTCTTCGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: QLPQGPACNDSSVAIAVFEPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...GAAGACAGCAATAGCCACTGAAGAGTCATTACATGCAGGACCCTGGGGCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTGCCTGCTGGTCTGGCTaGCCAACCAGACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSACWSG*PTRPGR
Trigger: TCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGC...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCTGTTTGTTCCTGCCTaGAGGAAGGGCAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCLFVPA*RKGRGM
Trigger: CATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAG...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTATATGTGCACTCCCTGTaGGCTCTGATCCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLYVHSL*ALIPAD
Trigger: GTCTGCGGGGATCAGAGCGCACAGGGAGTGCACATA...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGACTAGGGGGCTAGACTaGCTGGTCACTAAAAACACT +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGTRGLD*LVTKNT
Trigger: AGTGTTTTTAGTGACCAGGCAGTCTAGCCCCCTAGT...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCTGGACTCTTGGAGCCTaGGATCACAAGGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCWTLGA*DHKDQG
Trigger: TCCCTGATCCTTGTGATCCCAGGCTCCAAGAGTCCA...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp CCGGATGTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PDVALLKGFVVLLDHLLHLSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...ATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCACATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: RSGRNSDGLTHSFWSWLIAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...GATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCACTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGACTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDRLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGTTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGTCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATATCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQISFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCTTGACCCATAGCTTCTaGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLLLTVLNQAVCDVPDVALTHSF*SWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAA...GGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCCCTCCCAGCGGGCAATaGTCTCACCGATACACTTCC +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVPPSGQ*SHRYTS
Trigger: GGAAGTGTATCGGTGAGACCATTGCCCGCTGGGAGG...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCCACCTTCACGCCCAGTaGCACGCTGAATTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SKIGQGPGLASSNLLKPVHLHAQ*HAEFHP
Trigger: CGGGTGGAATTCAGCGTGCCACTGGGCGTGAAGGTG...GACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGAGCAGGCATGCTTCATaGTTAGCCCATAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVSRHAS*LAHRWG
Trigger: CCCCCATCTATGGGCTAACCATGAAGCATGCCTGCT...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTGAGCGCAGCTGCATTTaGAAGTGCTCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSERSCI*KCSQQA
Trigger: TGCCTGCTGTGAGCACTTCCAAATGCAGCTGCGCTC...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTCTGTGCCAGTATCCTaGGCTGTCTCTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYSVPVS*AVSSLH
Trigger: GTGAAGGGAAGAGACAGCCCAGGATACTGGCACAGA...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTCTGTGCCAGTATCCTaGGCTGTCTCTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVSVPVS*AVSSLH
Trigger: GTGAAGGGAAGAGACAGCCCAGGATACTGGCACAGA...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCACCCATAGCTTCCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVTHSFL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGGAAGCTATGGGT...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617691.4
CDS-3UTR CCA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGAAGAGCTTAAGAGGGTaGACCCAGCCTTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NQRETAEVAVQGSEVSSEKSLRG*TQPFLC
Trigger: GCAGAGGAAAGGCTGGGTCCACCCTCTTAAGCTCTT...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGAGAAGTGTCAAGTGAGTaGAGCTCCAGCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDREVSSE*SSSPKG
Trigger: TCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTC...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564596.5
3UTR CAA 72 bp AAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIGQGPGLASSN*LKPVSTLTEPA
Trigger: AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
3UTR CAA 72 bp GGGGTGAGAAACCGTTCAGGTAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GVRNRSGRNSDG*THSFWSWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACGGTTTCTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTGATGACATTGGTCACTaGTACCACCACATACCTGTA +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLADDIGH*YHHIPV
Trigger: TACAGGTATGTGGTGGTATCAGTGACCAATGTCATC...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTCTCATTCAGGTCCTTaGAGGCATTCAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVSHSGP*RHSGKG
Trigger: ACCCTTCCCTGAATGCCTTCAAGGACCTGAATGAGA...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000617691.4
CDS-3UTR TCA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTTCTCATTCAGGTCCTTaGAGGCATTCAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GLASSNLLKPVSTLTEPASHSGP*RHSGKG
Trigger: ACCCTTCCCTGAATGCCTTCAAGGACCTGAATGAGA...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR TCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVLVLTC*SQSAPS
Trigger: TGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAG...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACAAGGGCAGAGGAATGTaGTGTTCCCAGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYKGRGM*CSQELC
Trigger: ACACAGTTCCTGGGAACATCACATTCCTCTGCCCTT...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GATCTCAAACCCAGAGCTACCTCTCCATCCAGGTCTGGTCCTTCACTATTCCTACATTTGTTCTGGAGGTaGTGCCCCCTGAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DLKPRATSPSRSGPSLFLHLFWR*CPLRLL
Trigger: CAACAGCCTCAGGGGGCATCACCTCCAGAACAAATG...TAGGAATAGTGAAGGACCAGACCTGGATGGAGAGGTAGCTCTGGGTTTGAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLEPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCTGAATTCCACCCGTTaGAGCAGGATAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGLNSTR*SRIARK
Trigger: CTTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTCTGAATTCCACCCGTTaGAGCAGGATAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCLNSTR*SRIARK
Trigger: CTTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAG...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGCTGCATTTGGAAGTaGTCACAGCAGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCSCIWK*SQQACF
Trigger: GAAGCATGCCTGCTGTGAGCACTTCCAAATGCAGCT...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATAGTTCTTAAGCTCTTATaGAAGCATGCAAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIVLKLL*KHASSM
Trigger: CATTGAGCTTGCATGCTTGCATAAGAGCTTAAGAAC...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTTGGACTCTTGGAGCCTaGGATCACAAGGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGWTLGA*DHKDQG
Trigger: TCCCTGATCCTTGTGATCCCAGGCTCCAAGAGTCCA...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCGGAAGGGTGGACTCTTaGAGCCTGGGATCACAAGGA +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVGRVDS*SLGSQG
Trigger: TCCTTGTGATCCCAGGCTCCAAGAGTCCACCCTTCC...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp GTGAGAAACCGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCAGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRNRSGRNSDGLTHSFWSGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACGGTTTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CTGCCAATCACTGTGTCTAGCTCCTCTTGGATCTTTCTCTGTACCCTGGGGTTCCCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: LPITVSSSSWIFLCTLGFPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...GAACCCCAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACACAGTGATTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp ACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: TRGRQLKWQFRAQKCQVSVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...ACTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp CTCATCCAGCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGTTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: LIQLLLLTVLNQAVCDVPFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...CGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CCGGATGTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATTCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: PDVALLKGFVVLLDHLLHSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...ATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCACATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR CCA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: FRASQRPKDLLTLAGLLAWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp CTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: LLLLTVLNQAVCDVPDVAWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...GGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp CTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCCATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLLLTVLNQAVCDVPDVAHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...GGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CTCATCCAGCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGTTGACCCATAGCTTCTaGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIQLLLLTVLNQAVCDVPLTHSF*SWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAA...CGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCCTCCCAGCGGGCAATaGTCTCACCGATACACTTCC +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSPPSGQ*SHRYTS
Trigger: GGAAGTGTATCGGTGAGACCATTGCCCGCTGGGAGG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTGGTTAGCCCATAGATaGGGGTCATGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYWLAHR*GSCPPS
Trigger: TGAAGGTGGACATGACCCCCATCTATGGGCTAACCA...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTGGTTAGCCCATAGATaGGGGTCATGTCCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVWLAHR*GSCPPS
Trigger: TGAAGGTGGACATGACCCCCATCTATGGGCTAACCA...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGAGCGCAGCTGCATTTaGAAGTGCTCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLERSCI*KCSQQA
Trigger: TGCCTGCTGTGAGCACTTCCAAATGCAGCTGCGCTC...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTTCTGTGCCAGTATCCTaGGCTGTCTCTTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSSVPVS*AVSSLH
Trigger: GTGAAGGGAAGAGACAGCCCAGGATACTGGCACAGA...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTGCCACGTGATGTCCCGGATGTaGCCCTTAGGTAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: GRNSDGLTHSFWSWLICHVMSRM*PLGRES
Trigger: ACTTTCCCTACCTAAGGGCCACATCCGGGACATCAC...GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAAGCAAATGGCACAGATaGCATTGGTCACTGATACCA +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVSKWHR*HWSLIP
Trigger: TGGTATCAGTGACCAATGTCATCTGTGCCATTTGCT...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVNDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp ACCTGCCAATCACTGTGTCTAGCTCCTCTTGGATCTTTCTCTGTACCCTGGGGTGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TCQSLCLAPLGSFSVPWGGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...ACCCCAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACACAGTGATTGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTCTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCLVLTC*SQSAPS
Trigger: TGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAG...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGCAGTTGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTGGAGGTGGCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSCDCVKPSSKEVQDDVNDLGGG*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGCCACCTCCAAGATC...ATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp TGTAACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGGAACTCAGATGGGTTaGCCCATAGCTTCCTGTAAC +
Preference number: 4 (lower is better)
Translates to: CNQRETAEVAVQGSEVSSGTQMG*PIASCN
Trigger: GTTACAGGAAGCTATGGGTCAACCCATCTGAGTTCC...ACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp TCCTACTACCTTAGAATGCTGCTAGCCCCAACTCATGGGACATTTGACACACAGGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SYYLRMLLAPTHGTFDTQGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...CTGTGTGTCAAATGTCCCATGAGTTGGGGCTAGCAGCATTCTAAGGTAGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp GGCTATTGCTGTCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATGGGGCCGCCGTGACCTaGCAATCACTGTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GYCCLLKGFVVLLDHLLHGAAVT*QSLCLA
Trigger: AGCTAGACACAGTGATTGGCAGGTCACGGCGGCCCC...ATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGACAGCAATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTACTGAATTCCACCCGTTaGAGCAGGATAGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLLNSTR*SRIARK
Trigger: CTTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAG...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTAGCTGCATTTGGAAGTaGTCACAGCAGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGSCIWK*SQQACF
Trigger: GAAGCATGCCTGCTGTGAGCACTTCCAAATGCAGCT...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTAGCTGCATTTGGAAGTaGTCACAGCAGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSSCIWK*SQQACF
Trigger: GAAGCATGCCTGCTGTGAGCACTTCCAAATGCAGCT...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTGAGACTACCTCTGTaGCAGTATCCTGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLVRLPL*QYPGLS
Trigger: AGACAGCCCAGGATACTGGCACAGAGGTAGTCTCAC...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGGACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RTGKQPMDRRINAMIVLILSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...GATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp TCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SKIGQGPGLASSNLLKPVGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...GACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp ATTATGAGGCCAGGAGATGAACTCTTTAACTCTTCCTGGCTCCCTCAGCAACTGGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IMRPGDELFNSSWLPQQLGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...CAGTTGCTGAGGGAGCCAGGAAGAGTTAAAGAGTTCATCTCCTGGCCTCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CCA 90 bp GTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCCTTCTCAAAGGTTTTGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VLNQAVCDVPDVALLKGFVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...AAAACCTTTGAGAAGGGCCACATCCGGGACATCACAGACAGCCTGATTGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR CCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGATTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDRFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp GCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTAGGTACTTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: ASSNLLKPVSTLTEPARYFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...GTACCTAGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGTCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTACATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCATTGACCCATAGCTTCTaGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPLTHSF*SWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAA...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTTGACCCATAGCTTCTaGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSISIYVALFYLLSLEGVLTHSF*SWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAA...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAAGCAGGCATGCTTCATaGTTAGCCCATAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLSRHAS*LAHRWG
Trigger: CCCCCATCTATGGGCTAACCATGAAGCATGCCTGCT...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTACCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WPCFTCCLWRVCRGKSRVPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...TACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCACCAATTGTCAAAGATTaGACAGGGTCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPPIVKD*TGSWFG
Trigger: GCCAAACCAGGACCCTGTCCAATCTTTGACAATTGG...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCCAATTGTCAAAGATTaGACAGGGTCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCPIVKD*TGSWFG
Trigger: GCCAAACCAGGACCCTGTCCAATCTTTGACAATTGG...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCCTAGTCCTGGTGCCTaGATATGTGCACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSPSPGA*ICALPV
Trigger: CACAGGGAGTGCACATATCCAGGCACCAGGACTAGG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAACTGCCCCAGGGTCCTGCATGTAATGACTCTTCAGTGGCTATTGCTGTCTTCCTCTCCATCCAGGTCTaGTCCTTCACTATTCCTAGC +
Preference number: 4 (lower is better)
Translates to: QLPQGPACNDSSVAIAVFLSIQV*SFTIPS
Trigger: GCTAGGAATAGTGAAGGACCAGACCTGGATGGAGAG...GAAGACAGCAATAGCCACTGAAGAGTCATTACATGCAGGACCCTGGGGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTGGGGACCTGAGGTCTTaGGGCCCTGATTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLGDLRS*GPDYPE
Trigger: TTCTGGGTAATCAGGGCCTCAAGACCTCAGGTCCCC...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGCAAATGGCACAGATaGCATTGGTCACTGATACCA +
Preference number: 4 (lower is better)
Translates to: APSASMWPCFTCCLWRVCSKWHR*HWSLIP
Trigger: TGGTATCAGTGACCAATGTCATCTGTGCCATTTGCT...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp AGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCTCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSKTMLMIFSSDSWTLAFSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...GAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp CAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGAGCTCCAGCCCCAAAGGATAGAAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QFRAQKCQVSGAPAPKDRNDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...TCTATCCTTTGGGGCTGGAGCTCCACTCACTTGACACTTCTGAGCCCTGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR TCA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAAAGGGCAGAGGAATGTaGTGTTCCCAGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLKGRGM*CSQELC
Trigger: ACACAGTTCCTGGGAACATCACATTCCTCTGCCCTT...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TCCTACTACCTTAGAATGCTGCTAGCCCCAACTCATGGGACATTTGACACACAGGGGAAAGTCCACAGGTaGGCAAGATCTCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SYYLRMLLAPTHGTFDTQGKVHR*ARSQTQ
Trigger: CTGGGTTTGAGATCTTGCTCACCTGTGGACTTTCCC...CTGTGTGTCAAATGTCCCATGAGTTGGGGCTAGCAGCATTCTAAGGTAGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTTGGGTCCTGAAGTCCTaGATGAGATGCCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCWVLKS*MRCHLY
Trigger: ATACAGATGGCATCTCATTCAGGACTTCAGGACCCA...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR TCA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTTTCCTCTGCATCTCTaGACTTACTGGTCATGGTTG +
Preference number: 4 (lower is better)
Translates to: NQRETAEVAVQGSEVSSEFPLHL*TYWSWL
Trigger: CAACCATGACCAGTAAGTTCAGAGATGCAGAGGAAA...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp AACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCGAGCCAATTCGGATCTaGAGCACGTCCCCATACTGC +
Preference number: 4 (lower is better)
Translates to: NPAPKRSKTMLMIFSSDSEPIRI*STSPYC
Trigger: GCAGTATGGGGACGTGCTGCAGATCCGAATTGGCTC...GCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR GCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGTTTGTTCCTGCCTaGAGGAAGGGCAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSLFVPA*RKGRGM
Trigger: CATTCCTCTGCCCTTCCTGCAGGCAGGAACAAACAG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGTATGTGCACTCCCTGTaGGCTCTGATCCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKYVHSL*ALIPAD
Trigger: GTCTGCGGGGATCAGAGCGCACAGGGAGTGCACATA...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCTGAGCTGGGAAGGGTaGACTCTTGGAGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKLSWEG*TLGAWD
Trigger: ATCCCAGGCTCCAAGAGTCCACCCTTCCCAGCTCAG...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTGCACCACCACGGGTGTaGAGCCAATTCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLAPPRV*SQFGSA
Trigger: TGCAGATCCGAATTGGCTCCACACCCGTGGTGGTGC...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCTCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: RSKTMLMIFSSDSWTLAFSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...GAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: NQRETAEVAVQGSEVSSEWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
3UTR CAA 72 bp AGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SSQLSKIGQGPG*ASSNLLKPVST
Trigger: GGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp ACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATACAATCAGGCTGTCTGTaGTGTCCCGGATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TGKQPMDRRINAMIVLIIQSGCL*CPGCGP
Trigger: AGGGCCACATCCGGGACATCACAGACAGCCTGATTG...TATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR TCA 90 bp CTGCCAATCACTGTGTCTAGCTCCTCTTGGATCTTTCTCTGTACCCTGGGGTTCAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: LPITVSSSSWIFLCTLGFNDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...GAACCCCAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACACAGTGATTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp GATGAACTCTTTAACTCTTCCTGGCTCCCTCAGCAACTGCCCCAGGGTCCTGCAATCTTCTTTCTATTATaGGGCCAGGAGATGAACTCT +
Preference number: 4 (lower is better)
Translates to: DELFNSSWLPQQLPQGPAIFFLL*GQEMNS
Trigger: AGAGTTCATCTCCTGGCCTCATAATAGAAAGAAGAT...TGCAGGACCCTGGGGCAGTTGCTGAGGGAGCCAGGAAGAGTTAAAGAGTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp CTTTATCTTCTTTCTATTATGAGGCCAGGAGATGAACTCTTTAACTCTTCCTGGCCCAGGGTCAGCATGTaGCCAATCAGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LYLLSIMRPGDELFNSSWPRVSM*PIRGQP
Trigger: GGGCTGGCCTCTGATTGGGCACATGCTGACCCTGGG...CCAGGAAGAGTTAAAGAGTTCATCTCCTGGCCTCATAATAGAAAGAAGATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp TCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCTCAGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKTMLMIFSSDSWTLAFSGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...TGAGAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR GCA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTAGCTGCATTTGGAAGTaGTCACAGCAGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TTWEGSISIYVALFYLLSSCIWK*SQQACF
Trigger: GAAGCATGCCTGCTGTGAGCACTTCCAAATGCAGCT...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGCAGTTGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATTCTTCAGGCCTTTaGGGACCTGAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSCDCVKPSSKEVQDDVNDSSGL*GPEVLR
Trigger: CCTCAAGACCTCAGGTCCCCAAAGGCCTGAAGAATC...ATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCCTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSKTMLMIFSSDSWTLAFLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...GAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCATCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CCA 90 bp GGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTGCCACCATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: GRNSDGLTHSFWSWLICHHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGGAGCGCAGCTGCATTTaGAAGTGCTCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKERSCI*KCSQQA
Trigger: TGCCTGCTGTGAGCACTTCCAAATGCAGCTGCGCTC...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTCCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATGGGAGACAGCTGAAGTaGCAGTTCAGGGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: DRQAAHGQEDQCNDCINHGRQLK*QFRAQK
Trigger: CTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCC...ATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR TCA 90 bp TCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCTCAGAGGTCTTGAGGCCCTaGTTACCCAGAATACCAGAC +
Preference number: 4 (lower is better)
Translates to: SKTMLMIFSSDSWTLAFSEVLRP*LPRIPD
Trigger: GTCTGGTATTCTGGGTAATCAGGGCCTCAAGACCTC...TGAGAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCGATGACATTGGTCACTaGTACCACCACATACCTGTA +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVDDIGH*YHHIPV
Trigger: TACAGGTATGTGGTGGTATCAGTGACCAATGTCATC...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RSGRNSDGLTHSFWSWLINDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...GATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp AGCAGTTGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SSCDCVKPSSKEVQDDVNGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...ATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp GACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATATACCACCACATACCTaGGGTACTGAGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DRQAAHGQEDQCNDCINHIPPHT*GTELSW
Trigger: CCAGCTCAGCTCAGTACCTCAGGTATGTGGTGGTAT...ATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTGATTCTTCAGGCCTTTaGGGACCTGAGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLDSSGL*GPEVLR
Trigger: CCTCAAGACCTCAGGTCCCCAAAGGCCTGAAGAATC...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCTTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SKIGQGPGLASSNLLKPVFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...GACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp ACCTGCCAATCACTGTGTCTAGCTCCTCTTGGATCTTTCTCTGTACCCTGGGGTTCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: TCQSLCLAPLGSFSVPWGSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...ACCCCAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACACAGTGATTGGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AAGGCTCTCTCCTACTACCTTAGAATGCTGCTAGCCCCAACTCATGGGACATTTGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: KALSYYLRMLLAPTHGTFVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...AAATGTCCCATGAGTTGGGGCTAGCAGCATTCTAAGGTAGTAGGAGAGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CCA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp GTGAGAAACCGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: VRNRSGRNSDGLTHSFWSWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACGGTTTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTCATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp CACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCCCATCAGCATCTATGTaGCCCTGTTTTACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HNLGRLHQHLCGPVLPVVPSASM*PCFTCC
Trigger: ACAACAGGTAAAACAGGGCCACATAGATGCTGATGG...GACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGGGAACTCAGATGGGTTaGCCCATAGCTTCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKGTQMG*PIASGH
Trigger: ATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCC...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR TCA 90 bp AGGACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCGATGACATTGGTCACTaGTACCACCACATACCTGAG +
Preference number: 4 (lower is better)
Translates to: RTGKQPMDRRINAMIVLIDDIGH*YHHIPE
Trigger: CTCAGGTATGTGGTGGTATCAGTGACCAATGTCATC...GATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR GCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACCCAGGGTCAGCATGTaGCCAATCAGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLPRVSM*PIRGQP
Trigger: GGGCTGGCCTCTGATTGGGCACATGCTGACCCTGGG...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGTTCTTAAGCTCTTATaGAAGCATGCAAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCVLKLL*KHASSM
Trigger: CATTGAGCTTGCATGCTTGCATAAGAGCTTAAGAAC...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTTCTTAAGCTCTTATaGAAGCATGCAAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: EGSISIYVALFYLLSLEGVLKLL*KHASSM
Trigger: CATTGAGCTTGCATGCTTGCATAAGAGCTTAAGAAC...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTGTTCTTAAGCTCTTATaGAAGCATGCAAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSVLKLL*KHASSM
Trigger: CATTGAGCTTGCATGCTTGCATAAGAGCTTAAGAAC...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp AGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: RSKTMLMIFSSDSWTLAFRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...GAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTCTCATCTGACAGCAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NPAPKRSKTMLMIFSSDSRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...GCTGTCAGATGAGAAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp ACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATATCTCATTCAGGTCCTTaGAGGCATTCAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TGKQPMDRRINAMIVLIISHSGP*RHSGKG
Trigger: ACCCTTCCCTGAATGCCTTCAAGGACCTGAATGAGA...TATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp TCCAAGACGATGTTAATGATCTTCTCATCTGACAGCTGGACATTGGCGTTCTCATTCTCATCTGACAGCTaGACATTGGCGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SKTMLMIFSSDSWTLAFSFSSDS*TLAFSS
Trigger: GGATGAGAACGCCAATGTCCAGCTGTCAGATGAGAA...TGAGAACGCCAATGTCCAGCTGTCAGATGAGAAGATCATTAACATCGTCTTGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR TCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAAGGCCTTTGGGGACCTaGGGTCTTGAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLRPLGT*GLEALI
Trigger: AATCAGGGCCTCAAGACCTCAGGTCCCCAAAGGCCT...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATAGCAAATGGCACAGATaGCATTGGTCACTGATACCA +
Preference number: 4 (lower is better)
Translates to: DRQAAHGQEDQCNDCINHSKWHR*HWSLIP
Trigger: TGGTATCAGTGACCAATGTCATCTGTGCCATTTGCT...ATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR TCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKNDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTAACTCATGGGACATTTaGCACACAGCGTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLNSWDI*HTASCT
Trigger: AGTACAAGACGCTGTGTGTCAAATGTCCCATGAGTT...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR GCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACATATGTGCACTCCCTGTaGGCTCTGATCCCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITYVHSL*ALIPAD
Trigger: GTCTGCGGGGATCAGAGCGCACAGGGAGTGCACATA...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp ACATTTGACACACAGCGTCTTGTACTGTTATCATCTGGATGTGCTCTTTATCTTCTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFDTQRLVLLSSGCALYLLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...AAGATAAAGAGCACATCCAGATGATAACAGTACAAGACGCTGTGTGTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CCA 90 bp AGCAGTTGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATTCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: SSCDCVKPSSKEVQDDVNSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...ATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CCA 90 bp AGGACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCTCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: RTGKQPMDRRINAMIVLISFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...GATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp ACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATAGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: TGKQPMDRRINAMIVLIIVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...TATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CCA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGTGGTTGATCTGCCACTaGTTTACAAAGACACAACGC +
Preference number: 4 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKWLICH*FTKTQR
Trigger: GCGTTGTGTCTTTGTAAACCAGTGGCAGATCAACCA...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp CAACTGCCCCAGGGTCCTGCATGTAATGACTCTTCAGTGGCTATTGCTGTCTTCTGTACTGTTATCATCTaGATGTGCTCTTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: QLPQGPACNDSSVAIAVFCTVII*MCSLSS
Trigger: AGAAGATAAAGAGCACATCCAGATGATAACAGTACA...GAAGACAGCAATAGCCACTGAAGAGTCATTACATGCAGGACCCTGGGGCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR TCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGATCCAGCTGCTTCTCCTaGCAGTGCTCAATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRSSCFS*QCSIRL
Trigger: CAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGA...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAGGAACTCAGATGGGTTaGCCCATAGCTTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRGTQMG*PIASCG
Trigger: CCCACAGGAAGCTATGGGTCAACCCATCTGAGTTCC...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617691.4
CDS-3UTR GCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGGACCTCAGCCTCCTTaGTCACATGCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITGPQPP*SHALPG
Trigger: ACCTGGAAGAGCATGTGAGCAAGGAGGCTGAGGTCC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAGGTACTGAGCTGAGCTaGGAAGGGTGGACTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRGTELS*EGWTLG
Trigger: TCCAAGAGTCCACCCTTCCCAGCTCAGCTCAGTACC...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTATCTCTTGTTGTGCTGTaGGGGATGGTGAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLSLVVL*GMVKGT
Trigger: CGTCCCCTTCACCATCCCCCACAGCACAACAAGAGA...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR GCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAGTGAGACTACCTCTGTaGCAGTATCCTGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLVRLPL*QYPGLS
Trigger: AGACAGCCCAGGATACTGGCACAGAGGTAGTCTCAC...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACCAGAAGAAACTCCGTaGCCGACATGGAGATTGGGA +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLPEETP*PTWRLG
Trigger: TCCCAATCTCCATGTCGGCCACGGAGTTTCTTCTGG...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACACTGACAGCTGGACATTaGCGTTCTCATCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITLTAGH*RSHPAA
Trigger: AGCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAG...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAGGCTCAAGCACAACTTaGGAAGGCTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLGSSTT*EGSISI
Trigger: GATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCC...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACTAGTTCTAACTTGCTaGAGCCAGTCAGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLLVLTC*SQSAPS
Trigger: TGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAG...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAAAGGGCAGAGGAATGTaGTGTTCCCAGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITKGRGM*CSQELC
Trigger: ACACAGTTCCTGGGAACATCACATTCCTCTGCCCTT...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR GCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAAGCTGCATTTGGAAGTaGTCACAGCAGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRSCIWK*SQQACF
Trigger: GAAGCATGCCTGCTGTGAGCACTTCCAAATGCAGCT...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGTGATGTCCCGGATGTaGCCCTTCTCAAAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITVMSRM*PFSKVL
Trigger: CAAAACCTTTGAGAAGGGCCACATCCGGGACATCAC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAGTGTCTAGCTCCTCTTaGATCTTTCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRVSSSS*IFLCTL
Trigger: CAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACAC...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAAGACACAACGCCCCTTaGGGATGTAAAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLRHNAP*GCKSLS
Trigger: TGAAAGGCTTTTACATCCCCAAGGGGCGTTGTGTCT...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACATTGACCCATAGCTTCTaGTCATGGTTGATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITLTHSF*SWLICH
Trigger: GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAA...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACCAATTGTCAAAGATTaGACAGGGTCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRPIVKD*TGSWFG
Trigger: GCCAAACCAGGACCCTGTCCAATCTTTGACAATTGG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTAAGCAAATGGCACAGATaGCATTGGTCACTGATACCA +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLSKWHR*HWSLIP
Trigger: TGGTATCAGTGACCAATGTCATCTGTGCCATTTGCT...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAAGCAAATGGCACAGATaGCATTGGTCACTGATACCA +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRSKWHR*HWSLIP
Trigger: TGGTATCAGTGACCAATGTCATCTGTGCCATTTGCT...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR TCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAAATGATCTTCTCATCTaGCAGCTGGACATTGGCGTT +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRNDLLI*QLDIGV
Trigger: AACGCCAATGTCCAGCTGTCAGATGAGAAGATCATT...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CCA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACATAGCTTCTGGTCATaGTTGATCTGCCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRHSFWS*LICHWF
Trigger: AAACCAGTGGCAGATCAACCATGACCAGAAGCTATG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CCA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTATCTTTCTCTGTACCCTaGGGTTCATCACCAAATACA +
Preference number: 4 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLSFSVP*GSSPNT
Trigger: TGTATTTGGTGATGAACCCCAGGGTACAGAGAAAGA...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTGGGAAGGGTGGACTCTaGGAGCCTGGGATCACAAGG +
Preference number: 5 (lower is better)
Translates to: VSTLTEPARYWAQGLPESGKGGL*EPGITR
Trigger: CCTTGTGATCCCAGGCTCCAAGAGTCCACCCTTCCC...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CAA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTASDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 5 (lower is better)
Translates to: VSTLTEPARYWAQGLPESQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPSPGAWICALPVRSDPRSDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GTCAGCACCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSTLTEPARYWAQGLPESSDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...ACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGGTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCGCTGAATTCCACCCGTaGCAGCAGGATAGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SPSPGAWICALPVRSDPRAEFHP*QQDSQE
Trigger: TTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAGC...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 5 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCTGGCTCAAGCACAACTaGGGAAGGCTCCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTAWLKHN*GRLHQH
Trigger: ATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCA...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGAAGGCAGCCCTGTTaGTTCCTGCCTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQRRQPC*FLPAGR
Trigger: CCTTCCTGCAGGCAGGAACAAACAGGGCTGCCTTCT...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGGGGAAGGGTGGACTCTaGGAGCCTGGGATCACAAGG +
Preference number: 5 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRGKGGL*EPGITR
Trigger: CCTTGTGATCCCAGGCTCCAAGAGTCCACCCTTCCC...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CAA 90 bp CAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: QRQVQGRGRQDPLGLPTALASSN*LKPVST
Trigger: GGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAA...GGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGSDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGAGTCTAGCTGAATTCCACCCGTaGCAGCAGGATAGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HRPACWSGCPTRPGRQSLAEFHP*QQDSQE
Trigger: TTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAGC...TAGACTCTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCGCTGAATTCCACCCGTaGCAGCAGGATAGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGAEFHP*QQDSQE
Trigger: TTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAGC...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATATGGCTCAAGCACAACTaGGGAAGGCTCCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQIWLKHN*GRLHQH
Trigger: ATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCA...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQGQGPG*ASSNLL
Trigger: CAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCC...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCACCCATAGGGTCAGATaGCTCAGCCTAGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SPSPGAWICALPVRSDPRTHRVR*LSLVQA
Trigger: TGCTTGAACTAGGCTGAGCAATCTGACCCTATGGGT...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CAAGTCCAGGGTAGGGGCAGGCAGGATCCCTTAGGCTTGCCCACAGCCCAGATATCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: QVQGRGRQDPLGLPTAQISNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...TATCTGGGCTGTGGGCAAGCCTAAGGGATCCTGCCTGCCCCTACCCTGGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CAA 90 bp AGCCCTAGTCCTGGTGCCTGGATATGTGCACTCCCTGTGCGCTCTGATCCCCGCTTCTCACTTAACACCTaGTCGATAGCACCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SPSPGAWICALPVRSDPRFSLNT*SIAPSG
Trigger: CCCTGATGGTGCTATCGACAAGGTGTTAAGTGAGAA...GCGGGGATCAGAGCGCACAGGGAGTGCACATATCCAGGCACCAGGACTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGCTCTTCCCTTCACTCTaGGCAGCTCCCAATTGTCAA +
Preference number: 5 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQLFPSL*AAPNCQ
Trigger: TTGACAATTGGGAGCTGCCAAGAGTGAAGGGAAGAG...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGACCCATAGGGTCAGATaGCTCAGCCTAGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQTHRVR*LSLVQA
Trigger: TGCTTGAACTAGGCTGAGCAATCTGACCCTATGGGT...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGACCCATAGGGTCAGATaGCTCAGCCTAGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQTHRVR*LSLVQA
Trigger: TGCTTGAACTAGGCTGAGCAATCTGACCCTATGGGT...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CCCTCACAGAGCCAGCTAGGTACTGGGCCCAGGGGCTTCCAGAGAGTTCTTCAGATGGCACAGATGACATaGGTCACTGATACCACCACA +
Preference number: 5 (lower is better)
Translates to: PSQSQLGTGPRGFQRVLQMAQMT*VTDTTT
Trigger: TGTGGTGGTATCAGTGACCAATGTCATCTGTGCCAT...CTGAAGAACTCTCTGGAAGCCCCTGGGCCCAGTACCTAGCTGGCTCTGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGRNSDG*THSFWS
Trigger: TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCT...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CAA 90 bp AGACCACATAGGCCAGCCTGCTGGTCTGGCTGCCCAACCAGACCAGGTAGACAGTTCTCACTTAACACCTaGTCGATAGCACCATCAGGG +
Preference number: 5 (lower is better)
Translates to: RPHRPACWSGCPTRPGRQFSLNT*SIAPSG
Trigger: CCCTGATGGTGCTATCGACAAGGTGTTAAGTGAGAA...CTGTCTACCTGGTCTGGTTGGGCAGCCAGACCAGCAGGCTGGCCTATGTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 5 (lower is better)
Translates to: APSASMWPCFTCCLWRVCQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGLASSN*LKPVST
Trigger: GGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAA...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGGATGTGGCCATCAGTGTAGGGATCTaGGAGGTGGCTGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: LLLLTVLNQAVCDVPDVAISVGI*EVAEVL
Trigger: CAGTACCTCAGCCACCTCCAAGATCCCTACACTGAT...GGCCACATCCGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CAA 90 bp AGGCTGTCTGTGATGTCCCGGATGTGGCCCTTAGGTAGGGAAAGTCCACAGGTGATCAGTGTAGGGATCTaGGAGGTGGCTGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: RLSVMSRMWPLGRESPQVISVGI*EVAEVL
Trigger: CAGTACCTCAGCCACCTCCAAGATCCCTACACTGAT...CACCTGTGGACTTTCCCTACCTAAGGGCCACATCCGGGACATCACAGACAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CAA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGGCTGAATTCCACCCGTaGCAGCAGGATAGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GSISIYVALFYLLSLEGVAEFHP*QQDSQE
Trigger: TTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAGC...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GLASSNLLKPVSTLTEPAALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSISIYVALFYLLSLEGVALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRLASSN*LKPVST
Trigger: GGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAA...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCTTGGCAGCTCCCAATaGTCAAAGATTGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: FYLLSLEGVQRQVQGRGRLGSSQ*SKIGQG
Trigger: ACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAG...CCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTCTTGGCAGCTCCCAATaGTCAAAGATTGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: FRASQRPKDLLTLAGLLALGSSQ*SKIGQG
Trigger: ACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAG...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGCTCTTCCCTTCACTCTaGGCAGCTCCCAATTGTCAA +
Preference number: 5 (lower is better)
Translates to: PCFTCCLWRVCRGKSRVGLFPSL*AAPNCQ
Trigger: TTGACAATTGGGAGCTGCCAAGAGTGAAGGGAAGAG...CCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTCAGAGCTTCTCAGAGGCCTAAGGACCTCCTAACCCTAGCAGGCCTCCTGGCTCTCTTCCCTTCACTCTaGGCAGCTCCCAATTGTCAA +
Preference number: 5 (lower is better)
Translates to: FRASQRPKDLLTLAGLLALFPSL*AAPNCQ
Trigger: TTGACAATTGGGAGCTGCCAAGAGTGAAGGGAAGAG...AGCCAGGAGGCCTGCTAGGGTTAGGAGGTCCTTAGGCCTCTGAGAAGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS CCA 90 bp GAAAAGCATGATCAGTGTAGGGATCTTGGAGGTGGCTGTAGGGGATaGAGCTGGAGCCTGGGTCCTGAAGTCCTGAATGAGATGCCATCT +
Preference number: 5 (lower is better)
Translates to: EKHDQCRDLGGGCRG*SWSLGPEVLNEMPS
Trigger: AGATGGCATCTCATTCAGGACTTCAGGACCCAGGCTCCAGCTCCATCCCCTACAGCCACCTCCAAGATCCCTACACTGATCATGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR CAA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGATCAGTGTAGGGATCTaGGAGGTGGCTGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: GSISIYVALFYLLSLEGVISVGI*EVAAEV
Trigger: TACCTCAGCAGCCACCTCCAAGATCCCTACACTGAT...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379727.8
CDS-3UTR CAA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTAGAAGGCAGCCCTGTTaGTTCCTGCCTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASRRQPC*FLPAGR
Trigger: CCTTCCTGCAGGCAGGAACAAACAGGGCTGCCTTCT...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAGGGTAGGGGCAGGCTTGAAGGCATTCAGGTaGACTAGGCTAAGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: FTCCLWRVCRGKSRVGAGLKAFR*TRLSSS
Trigger: AGAACTGCTTAGCCTAGTCAACCTGAATGCCTTCAA...GCCTGCCCCTACCCTGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612821.4
CDS-3UTR CAA 90 bp AACCAGAGGGAGACAGCTGAAGTGGCAGTTCAGGGCTCAGAAGTGTCAAGTGAGTCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: NQRETAEVAVQGSEVSSESNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...CTCACTTGACACTTCTGAGCCCTGAACTGCCACTTCAGCTGTCTCCCTCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CAA 90 bp CTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGAGGCAAGTCCAAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LCGPVLPVVSGGCAEASPRNSDG*THSFWS
Trigger: TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCT...TGGACTTGCCTCTGCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CAA 90 bp GCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: APSASMWPCFTCCLWRVCRNSDG*THSFWS
Trigger: TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCT...GCACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
CDS-3UTR CAA 90 bp GGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTGCCCAATTGTCAAAGATaGGACAGGGTCCTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: GSISIYVALFYLLSLEGVPNCQR*DRVLVW
Trigger: CCAAACCAGGACCCTGTCCAATCTTTGACAATTGGG...CACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GTGTCTATGAGTTTCAGGCTGAACCTTAGACCACATAGGCCAGCCTGCTGGTCTATCAGTGTAGGGATCTaGGAGGTGGCTGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: VSMSFRLNLRPHRPACWSISVGI*EVAEVL
Trigger: CAGTACCTCAGCCACCTCCAAGATCCCTACACTGAT...AGACCAGCAGGCTGGCCTATGTGGTCTAAGGTTCAGCCTGAAACTCATAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CAA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTATCAGTGTAGGGATCTaGGAGGTGGCTGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCISVGI*EVAEVL
Trigger: CAGTACCTCAGCCACCTCCAAGATCCCTACACTGAT...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CAA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTATCAGTGTAGGGATCTaGGAGGTGGCTGTAGGGGAT +
Preference number: 5 (lower is better)
Translates to: EGSISIYVALFYLLSLEGISVGI*EVAVGD
Trigger: ATCCCCTACAGCCACCTCCAAGATCCCTACACTGAT...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567032.5
CDS-3UTR CAA 90 bp GTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATGAAGCTTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VALLKGFVVLLDHLLHEASDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...AGCTTCATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR CAA 90 bp GGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCTGCCACAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GRNSDGLTHSFWSWLICHRNSDG*THSFWS
Trigger: TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCT...GTGGCAGATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CAA 90 bp GGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCAGCACCCTCACAGAGCCAGCTTTCTCACTTAACACCTaGTCGATAGCACCATCAGGG +
Preference number: 5 (lower is better)
Translates to: GLASSNLLKPVSTLTEPAFSLNT*SIAPSG
Trigger: CCCTGATGGTGCTATCGACAAGGTGTTAAGTGAGAA...AGCTGGCTCTGTGAGGGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGCCAGTCGCTGAATTCCACCCGTaGCAGCAGGATAGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SKIGQGPGLASSNLLKPVAEFHP*QQDSQE
Trigger: TTCCTGGCTATCCTGCTGCAACGGGTGGAATTCAGC...GACTGGCTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTGCCCTGTTTTACCTGTaGTCTCTGGAGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: TTWEGSISIYVALFYLLSALFYL*SLEGVQ
Trigger: CTGCACACCCTCCAGAGACAACAGGTAAAACAGGGC...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTTTGGCTAGTTCTAACTaGCTGAAGCCAGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: EGSISIYVALFYLLSLEGLASSN*LKPVST
Trigger: GGTGCTGACTGGCTTCAGCAAGTTAGAACTAGCCAA...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASGQGPG*ASSNLL
Trigger: CAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCC...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGTCCCAATTGTCAAAGATaGGACAGGGTCCTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RLHQHLCGPVLPVVSGGCPNCQR*DRVLVW
Trigger: CCAAACCAGGACCCTGTCCAATCTTTGACAATTGGG...ACACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp AAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTGCTTGGCAGCTCCCAATaGTCAAAGATTGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: KAPSASMWPCFTCCLWRVLGSSQ*SKIGQG
Trigger: ACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAG...CACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp ACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: TLGSSQLSKIGQGPGLASSNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...ACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CAA 90 bp CGTTCAGGTAGGAACTCAGATGGGTTGACCCATAGCTTCTGGTCATGGTTGATCAGGAACTCAGATGGGTaGACCCATAGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RSGRNSDGLTHSFWSWLIRNSDG*THSFWS
Trigger: TGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCT...GATCAACCATGACCAGAAGCTATGGGTCAACCCATCTGAGTTCCTACCTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CAA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTTGGCTCAAGCACAACTaGGGAAGGCTCCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: TTWEGSISIYVALFYLLSWLKHN*GRLHQH
Trigger: ATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCA...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000567032.5
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGAGAAGGCAGCCCTGTTaGTTCCTGCCTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKRRQPC*FLPAGR
Trigger: CCTTCCTGCAGGCAGGAACAAACAGGGCTGCCTTCT...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CTCATCCAGCTGCTTCTCCTGACAGTGCTCAATCAGGCTGTCTGTGATGTCCCGTTGACACACAGCGTCTaGTACTGTTATCATCTGGAT +
Preference number: 5 (lower is better)
Translates to: LIQLLLLTVLNQAVCDVPLTHSV*YCYHLD
Trigger: ATCCAGATGATAACAGTACAAGACGCTGTGTGTCAA...CGGGACATCACAGACAGCCTGATTGAGCACTGTCAGGAGAAGCAGCTGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CAA 90 bp ACCTGCCAATCACTGTGTCTAGCTCCTCTTGGATCTTTCTCTGTACCCTGGGGTCAACTCATGGGACATTaGACACACAGCGTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: TCQSLCLAPLGSFSVPWGQLMGH*THSVLY
Trigger: GTACAAGACGCTGTGTGTCAAATGTCCCATGAGTTG...ACCCCAGGGTACAGAGAAAGATCCAAGAGGAGCTAGACACAGTGATTGGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CAA 90 bp GACAGGCAAGCAGCCCATGGACAGGAGGATCAATGCAATGATTGTATTAATCATTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DRQAAHGQEDQCNDCINHSDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...ATGATTAATACAATCATTGCATTGATCCTCCTGTCCATGGGCTGCTTGCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564596.5
CDS-3UTR CAA 90 bp TGTGACTGTGTCAAACCCAGCTCCAAAGAGGTCCAAGACGATGTTAATGATCTTTCTGACAGCTGGACATaGGCGTTCTCATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CDCVKPSSKEVQDDVNDLSDSWT*AFSSSC
Trigger: GCAGCTGGATGAGAACGCCAATGTCCAGCTGTCAGA...AAGATCATTAACATCGTCTTGGACCTCTTTGGAGCTGGGTTTGACACAGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562201.5
ENST00000569630.5
CDS-3UTR CAA 90 bp GTGGCCCTTCTCAAAGGTTTTGTAGTGCTCCTTGACCATCTTCTGCATGAAGCTTCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: VALLKGFVVLLDHLLHEASNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...AGCTTCATGCAGAAGATGGTCAAGGAGCACTACAAAACCTTTGAGAAGGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562201.5
CDS-3UTR CAA 90 bp TCCTACTACCTTAGAATGCTGCTAGCCCCAACTCATGGGACATTTGACACACAGTCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: SYYLRMLLAPTHGTFDTQSNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...CTGTGTGTCAAATGTCCCATGAGTTGGGGCTAGCAGCATTCTAAGGTAGTAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CAA 90 bp TCACTCTTGGCAGCTCCCAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTATTCTCACTTAACACCTaGTCGATAGCACCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SLLAAPNCQRLDRVLVWLFSLNT*SIAPSG
Trigger: CCCTGATGGTGCTATCGACAAGGTGTTAAGTGAGAA...TAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp ACAACTTGGGAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCCCAATTGTCAAAGATaGGACAGGGTCCTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: TTWEGSISIYVALFYLLSPNCQR*DRVLVW
Trigger: CCAAACCAGGACCCTGTCCAATCTTTGACAATTGGG...AGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTCCCAAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GAAGGCTCCATCAGCATCTATGTGGCCCTGTTTTACCTGTTGTCTCTGGAGGGTTTCTCATTCAGGTCCTaGAAGGCATTCAGGTTGACT +
Preference number: 5 (lower is better)
Translates to: EGSISIYVALFYLLSLEGFSFRS*KAFRLT
Trigger: AGTCAACCTGAATGCCTTCAAGGACCTGAATGAGAA...ACCCTCCAGAGACAACAGGTAAAACAGGGCCACATAGATGCTGATGGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612821.4
CDS-3UTR CAA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGTCAAACTTGTGTCTCTaGTTGTGCTGTGGGGGATGG +
Preference number: 5 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKSNLCL*LCCGGW
Trigger: CCATCCCCCACAGCACAACAAGAGACACAAGTTTGA...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
CDS-3UTR CAA 90 bp GATCTCAAACCCAGAGCTACCTCTCCATCCAGGTCTGGTCCTTCACTATTCCTAACTCTTCAGTGGCTATaGCTGTCTTCTCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: DLKPRATSPSRSGPSLFLTLQWL*LSSQRF
Trigger: AAACCTTTGAGAAGACAGCAATAGCCACTGAAGAGT...TAGGAATAGTGAAGGACCAGACCTGGATGGAGAGGTAGCTCTGGGTTTGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569630.5
CDS-3UTR CAA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGGGAAGGGTGGACTCTaGGAGCCTGGGATCACAAGG +
Preference number: 5 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITGKGGL*EPGITR
Trigger: CCTTGTGATCCCAGGCTCCAAGAGTCCACCCTTCCC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000617691.4
CDS-3UTR CAA 90 bp CAATTGTCAAAGATTGGACAGGGTCCTGGTTTGGCTAGTTCTAACTTGCTGAAGTTCTCACTTAACACCTaGTCGATAGCACCATCAGGG +
Preference number: 5 (lower is better)
Translates to: QLSKIGQGPGLASSNLLKFSLNT*SIAPSG
Trigger: CCCTGATGGTGCTATCGACAAGGTGTTAAGTGAGAA...CTTCAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCCAATCTTTGACAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACAGGATCCCTTAGGCTaGCCCACAGCCCAGATAGCA +
Preference number: 5 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRQDPLG*PTAQIA
Trigger: TGCTATCTGGGCTGTGGGCAAGCCTAAGGGATCCTG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAAGAAGGCAGCCCTGTTaGTTCCTGCCTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRRRQPC*FLPAGR
Trigger: CCTTCCTGCAGGCAGGAACAAACAGGGCTGCCTTCT...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp CAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTATGGCTCAAGCACAACTaGGGAAGGCTCCATCAGCAT +
Preference number: 5 (lower is better)
Translates to: QVVVLTHFWIPGLEFSLLWLKHN*GRLHQH
Trigger: ATGCTGATGGAGCCTTCCCAAGTTGTGCTTGAGCCA...TAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp GGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGAATTTTCCCTATTACAGGACAGGGTCCTGGTTaGGCTAGTTCTAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSCSYTFLDTWVRIFPITGQGPG*ASSNLL
Trigger: CAGCAAGTTAGAACTAGCCAAACCAGGACCCTGTCC...TGTAATAGGGAAAATTCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACTTGGCAGCTCCCAATaGTCAAAGATTGGACAGGGT +
Preference number: 5 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRLGSSQ*SKIGQG
Trigger: ACCCTGTCCAATCTTTGACAATTGGGAGCTGCCAAG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS-3UTR CAA 90 bp TCTTTATTTAGCTCAGGTAGTTGTTCTTACACATTTTTGGATACCTGGGTTAGACTCTTCCCTTCACTCTaGGCAGCTCCCAATTGTCAA +
Preference number: 5 (lower is better)
Translates to: SLFSSGSCSYTFLDTWVRLFPSL*AAPNCQ
Trigger: TTGACAATTGGGAGCTGCCAAGAGTGAAGGGAAGAG...TCTAACCCAGGTATCCAAAAATGTGTAAGAACAACTACCTGAGCTAAATAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379727.8
ENST00000395048.6
ENST00000612821.4
ENST00000617691.4
CDS CCA 72 bp AGATGCCATCTGTATCTAGAGGTCTGGTACCAGCTGTaGGACCATGGGCAAGTCCTCCTCTTCCCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RCHLYLEVWYQL*DHGQVLLFPWP
Trigger: AGGCCAGGGGAAGAGGAGGACTTGCCCATGGTCCCACAGCTGGTACCAGACCTCTAGATACAGATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567032.5