RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYFIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000273749, ENSG00000280618

Ensembl transcript IDs: ENST00000557890.1, ENST00000561263.2, ENST00000610365.4, ENST00000611832.4, ENST00000613006.4, ENST00000617556.4, ENST00000617928.5, ENST00000619037.1, ENST00000619290.4, ENST00000619348.4, ENST00000621105.1, ENST00000622576.1, ENST00000625276.2, ENST00000625601.2, ENST00000626496.1, ENST00000627204.1, ENST00000627816.1, ENST00000628747.2, ENST00000628954.2, ENST00000628956.1, ENST00000630158.2, ENST00000630629.2, ENST00000671714.1, ENST00000672091.1

Found 758 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTCCAGCCATGTGAGCCCTGTGGATCGGGGACAGCTGAAGGCTaGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGGGCCT +
Preference number: 1 (lower is better)
Translates to: QLQPCEPCGSGTAEG*TRCSRSLCAAPTGP
Trigger: AGGCCCAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCCCCGATCCACAGGGCTCACATGGCTGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR GCA 90 bp GTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTaGCTGAGCAGCTCGGCAGAGCCCAAGGACTCGGCCATGGTGCGC +
Preference number: 1 (lower is better)
Translates to: VLTACKSLSMPRDLS*LSSSAEPKDSAMVR
Trigger: GCGCACCATGGCCGAGTCCTTGGGCTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR TCA 90 bp CACCTCAGCCTTAGAGGTGACCTCCATCCCAGCTGGCCTGGTATGTaGGTTCAGGTTAGAGTTCCTTGCCAAGCCAGGCAGCACAGGGTT +
Preference number: 1 (lower is better)
Translates to: HLSLRGDLHPSWPGM*VQVRVPCQARQHRV
Trigger: AACCCTGTGCTGCCTGGCTTGGCAAGGAACTCTAACCTGAACTCACATACCAGGCCAGCTGGGATGGAGGTCACCTCTAAGGCTGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR TCA 90 bp TTGCTGGCTTCCTCCAGGTCATGGGCACAGGTAACAGAGAGGCACTaGGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGT +
Preference number: 1 (lower is better)
Translates to: LLASSRSWAQVTERH*VASSYPDWSSQHGR
Trigger: ACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGTGCCCATGACCTGGAGGAAGCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR TCA 90 bp ATTTGCCTGCGGAACCCTAAATATAAAGCTAAACCTGTGCTGAGGTaGGCGGTATATGGGATGGTGTCACGGTCCCATCCCACCTCAGCC +
Preference number: 1 (lower is better)
Translates to: ICLRNPKYKAKPVLR*AVYGMVSRSHPTSA
Trigger: GGCTGAGGTGGGATGGGACCGTGACACCATCCCATATACCGCTCACCTCAGCACAGGTTTAGCTTTATATTTAGGGTTCCGCAGGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR TCA 90 bp ACCTCATTTGCCTGCGGAACCCTAAATATAAAGCTAAACCTGTGCTaGGGTGAGCGGTATATGGGATGGTGTCACGGTCCCATCCCACCT +
Preference number: 1 (lower is better)
Translates to: TSFACGTLNIKLNLC*GERYMGWCHGPIPP
Trigger: AGGTGGGATGGGACCGTGACACCATCCCATATACCGCTCACCTCAGCACAGGTTTAGCTTTATATTTAGGGTTCCGCAGGCAAATGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR GCA 90 bp CAGGATGGTTCGTACACTTACTACTTTTCTGTGCCGTGCATCATATaGTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: QDGSYTYYFSVPCII*FWTVSKGLRKSRRG
Trigger: GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTGTACGAACCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CCA 90 bp GGTTCGTACACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTaGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCTGCTT +
Preference number: 1 (lower is better)
Translates to: GSYTYYFSVPCIICF*TVSKGLRKSRRGLL
Trigger: AAGCAGGCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTGTACGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp GCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTGCCTGAGCAGCTCGGCACCAAGGACTCGGCCATaGTGCGCACCAGGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: ACKSLSMPRDLSCLSSSAPRTRP*CAPGRV
Trigger: AACTCTACCTGGTGCGCACCATGGCCGAGTCCTTGG...TGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR CAA 90 bp AGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCGGCAGAGCCCAAGGACTCGGCCATG +
Preference number: 2 (lower is better)
Translates to: RNVLTACKSLSMPRD*SCLSSSAEPKDSAM
Trigger: CATGGCCGAGTCCTTGGGCTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR-3UTR TCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGCACCCTTGAAACGCTaGCAAAGGTTTTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: ALLQHLVLVCVGADLEREAPLKR*QRFSLG
Trigger: GCCCAGAGAAAACCTTTGTCAGCGTTTCAAGGGTGC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
3UTR-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 2 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CAA 90 bp GGCACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATaGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGCGGA +
Preference number: 2 (lower is better)
Translates to: GTGNREALSSLFISR*EQPTRPFYTSFACG
Trigger: TCCGCAGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 2 (lower is better)
Translates to: EALSSLFISRLEQPTRPFPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGAGCGGTATATGGGATaGTGTCACGGTCCCATCCCA +
Preference number: 2 (lower is better)
Translates to: TGNREALSSLFISRLEQPERYMG*CHGPIP
Trigger: TGGGATGGGACCGTGACACCATCCCATATACCGCTC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp ATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGAACCACCAAGGACTCGGCCATaGTGCGCACCAGGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: MSNMVGPSRLLLKVFLEPPRTRP*CAPGRV
Trigger: AACTCTACCTGGTGCGCACCATGGCCGAGTCCTTGG...TGGTTCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR-3UTR TCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGAAGCTAAACCTGTGCTaGGGTGAGCGGTATATGGGA +
Preference number: 2 (lower is better)
Translates to: NREALSSLFISRLEQPTRKLNLC*GERYMG
Trigger: TCCCATATACCGCTCACCTCAGCACAGGTTTAGCTT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp GTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGAACCACTAACGTGTTAACCGCATaGAAGAGCCTCTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: VQYGGPLKATSQGFLGTTNVLTA*KSLSMP
Trigger: GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTT...AGTGGTTCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR-3UTR GCA 90 bp GTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGAACCACTAAAGGGGTAGGTAGGTaGACGACTGCCTCAGAAACG +
Preference number: 2 (lower is better)
Translates to: VQYGGPLKATSQGFLGTTKGVGR*TTASET
Trigger: CGTTTCTGAGGCAGTCGTGCACCTACCTACCCCTTT...AGTGGTTCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR-3UTR TCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGAATTTTGTAGGAACGTaGTGGCAACAATCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: NREALSSLFISRLEQPTRNFVGT*WQQSAA
Trigger: GGCTGCTGATTGTTGCCATCACGTTCCTACAAAATT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTAGCTGGCCTGGTATGTaGGTTCAGGTTAGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPSWPGM*VQVRVP
Trigger: AGGAACTCTAACCTGAACTCACATACCAGGCCAGCT...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGGACAAAGGTTTTCTCTaGGCCAGAGACATTGAATTT +
Preference number: 2 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLDKGFL*ARDIEF
Trigger: AAATTCAATGTCTCTGGCCCAGAGAAAACCTTTGTC...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619037.1
3UTR-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAAAGGCATGCCATGTTaGGTTACGGAGTGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKKGMPC*VTECSA
Trigger: CGCGCTGCACTCCGTAACTCAACATGGCATGCCTTT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTAAGTTTCTTATGGAATaGATGAATGAACCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EALSSLFISRLEQPTRPFKFLME*MNEPSS
Trigger: GCTGCTGGGTTCATTCATTCATTCCATAAGAAACTT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp CTCTCGATGAAATTTTTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTAACGTGTTAACCGCATaGAAGAGCCTCTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: LSMKFFYVQYGGPLKATSNVLTA*KSLSMP
Trigger: GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTT...AGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAAAAATTTCATCGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCTTCATATCCAGATTaGAGCAGCCAACACGGCCGT +
Preference number: 2 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSSYPD*SSQHGR
Trigger: ACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACTCCTCCCACATTGCTaGCTTCCTCCAGGTCATGGG +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTLLPHC*LPPGHG
Trigger: CCCATGACCTGGAGGAAGCCAGCAATGTGGGAGGAG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAAAGGCATGCCATGTTaGGTTACGGAGTGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTKGMPC*VTECSA
Trigger: CGCGCTGCACTCCGTAACTCAACATGGCATGCCTTT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCCCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 2 (lower is better)
Translates to: SVVSKISTATTSKSAAECPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAAGTTTCTTATGGAATaGATGAATGAACCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TGNREALSSLFISRLEQPKFLME*MNEPSS
Trigger: GCTGCTGGGTTCATTCATTCATTCCATAAGAAACTT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCGGCTACAATATAAAGTaGGTTCAGTTAATCATGCTG +
Preference number: 2 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGGYNIK*VQLIML
Trigger: CAGCATGATTAACTGAACTCACTTTATATTGTAGCC...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATACACCTCATTTGCCTaGGGAACCCTAAATATAAAG +
Preference number: 2 (lower is better)
Translates to: TGNREALSSLFISRLEQPYTSFA*GTLNIK
Trigger: CTTTATATTTAGGGTTCCGCAGGCAAATGAGGTGTA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAAACCTGTGCTGAGGTaGGCGGTATATGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTKPVLR*AVYGMV
Trigger: CACCATCCCATATACCGCTCACCTCAGCACAGGTTT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTAAAGGCATGCCATGTTaGGTTACGGAGTGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSKGMPC*VTECSA
Trigger: CGCGCTGCACTCCGTAACTCAACATGGCATGCCTTT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGAATTTTGTAGGAACGTaGTGGCAACAATCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQNFVGT*WQQSAA
Trigger: GGCTGCTGATTGTTGCCATCACGTTCCTACAAAATT...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 2 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAAGCTAAACCTGTGCTaGGGTGAGCGGTATATGGGA +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTKLNLC*GERYMG
Trigger: TCCCATATACCGCTCACCTCAGCACAGGTTTAGCTT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTTCATGTCACTTGAGTaGGTTTGGCAGTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQFMSLE*VWQCNR
Trigger: CCTGTTACACTGCCAAACTCACTCAAGTGACATGAA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 2 (lower is better)
Translates to: HPIEKQFCRNVMATISSQTERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATCTTCATATCCAGATTaGAGCAGCCAACACGGCCGT +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTSSYPD*SSQHGR
Trigger: ACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 2 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTTERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTTGTACCAAGTACTTTaGTTAAGAGCTCCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQLYQVL*LRAPLG
Trigger: GCCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAAGTTTCTTATGGAATaGATGAATGAACCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKKFLME*MNEPSS
Trigger: GCTGCTGGGTTCATTCATTCATTCCATAAGAAACTT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 2 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGGCTACAATATAAAGTaGGTTCAGTTAATCATGCTG +
Preference number: 2 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRGYNIK*VQLIML
Trigger: CAGCATGATTAACTGAACTCACTTTATATTGTAGCC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGGTTTTACACCTCATTTaGCTGCGGAACCCTAAATAT +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQVLHLI*LRNPKY
Trigger: ATATTTAGGGTTCCGCAGGCAAATGAGGTGTAAAAC...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 2 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSTERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR CAA 90 bp CTGGGTTTATTCTTCAGTTACCCTAATCCCATGATGCCTGGAACCTaGATTACCGTTTTACATCAGCTCTTGTACTTTTCAGTATATTTT +
Preference number: 2 (lower is better)
Translates to: LGLFFSYPNPMMPGT*ITVLHQLLYFSVYF
Trigger: AAAATATACTGAAAAGTACAAGAGCTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAAGAATAAACCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAATTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR GCA 72 bp GCCAGCGCCAAGCCATCACTCCCCGAGGGCCTCCCCTaGCAATGGTGCTGGTATCCCATGCAGCTCACCACT +
Preference number: 3 (lower is better)
Translates to: ASAKPSLPEGLP*QWCWYPMQLTT
Trigger: AGTGGTGAGCTGCATGGGATACCAGCACCATTGGCAGGGGAGGCCCTCGGGGAGTGATGGCTTGGCGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CCA 72 bp CCATGTGAGCCCTGTGGATCGGGGACAGCTGAAGGCTaGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCC +
Preference number: 3 (lower is better)
Translates to: PCEPCGSGTAEG*TRCSRSLCAAP
Trigger: GGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCCCCGATCCACAGGGCTCACATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp CGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTGCCTGAGCAGCTCGGCGCGCACCAGGTAGAGTaGGGTGGGAAACAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: RMQEPLHAQRLELPEQLGAHQVE*GGKQRS
Trigger: GCTCCTCTGTTTCCCACCCAACTCTACCTGGTGCGC...GCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR GCA 72 bp GGAAGAAAGTGTTCGCCTGTTCCAGCCTGTGGCTCCTaGCTGGAGGTTACCCAGTGGTGCGCCAGCGCCAAG +
Preference number: 3 (lower is better)
Translates to: GRKCSPVPACGS*LEVTQWCASAK
Trigger: CTTGGCGCTGGCGCACCACTGGGTAACCTCCAGGCAGGAGCCACAGGCTGGAACAGGCGAACACTTTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR GCA 72 bp CAGAGGAGCAGCAGAAACCACAGGCGCCACTTTCTCTaGCTGAGCAGGCAGCGAGGACCTCATTTAACCCGG +
Preference number: 3 (lower is better)
Translates to: QRSSRNHRRHFL*LSRQRGPHLTR
Trigger: CCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAGAAAGTGGCGCCTGTGGTTTCTGCTGCTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR TCA 72 bp CTTAGAGGTGACCTCCATCCCAGCTGGCCTGGTATGTaGGTTCAGGTTAGAGTTCCTTGCCAAGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LRGDLHPSWPGM*VQVRVPCQARQ
Trigger: CTGCCTGGCTTGGCAAGGAACTCTAACCTGAACTCACATACCAGGCCAGCTGGGATGGAGGTCACCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR GCA 72 bp TCGATGGCCTTAGCACCTCATCAAGCCAGCACATCCTaGCTGCTGTTGCAGCCTGGCTGGGTTTATTCTTCA +
Preference number: 3 (lower is better)
Translates to: SMALAPHQASTS*LLLQPGWVYSS
Trigger: TGAAGAATAAACCCAGCCAGGCTGCAACAGCAGGCAGGATGTGCTGGCTTGATGAGGTGCTAAGGCCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp CATGGTTCTCACCATGTAAAGCACCAAAGGTTAAAAGGGGTAGGTAGGTGCACGGCGCACCAGGTAGAGTaGGGTGGGAAACAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: HGSHHVKHQRLKGVGRCTAHQVE*GGKQRS
Trigger: GCTCCTCTGTTTCCCACCCAACTCTACCTGGTGCGC...CGTGCACCTACCTACCCCTTTTAACCTTTGGTGCTTTACATGGTGAGAACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR TCA 72 bp GCCTGCGGAACCCTAAATATAAAGCTAAACCTGTGCTaGGGTGAGCGGTATATGGGATGGTGTCACGGTCCC +
Preference number: 3 (lower is better)
Translates to: ACGTLNIKLNLC*GERYMGWCHGP
Trigger: GGGACCGTGACACCATCCCATATACCGCTCACCTCAGCACAGGTTTAGCTTTATATTTAGGGTTCCGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR TCA 72 bp TCCTCCAGGTCATGGGCACAGGTAACAGAGAGGCACTaGGTAGCCTCTTCATATCCAGATTGGAGCAGCCAA +
Preference number: 3 (lower is better)
Translates to: SSRSWAQVTERH*VASSYPDWSSQ
Trigger: TTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGTGCCCATGACCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 3 (lower is better)
Translates to: TGNREALSSLFISRLEQPERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp GATGAAATTTTTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCG +
Preference number: 3 (lower is better)
Translates to: DEIFLCPIWWAPQGYFSRSMPRD*SCLSSS
Trigger: CGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGA...CCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAAAAATTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR TCA 72 bp CGGAACCCTAAATATAAAGCTAAACCTGTGCTGAGGTaGGCGGTATATGGGATGGTGTCACGGTCCCATCCC +
Preference number: 3 (lower is better)
Translates to: RNPKYKAKPVLR*AVYGMVSRSHP
Trigger: GGGATGGGACCGTGACACCATCCCATATACCGCTCACCTCAGCACAGGTTTAGCTTTATATTTAGGGTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCTCTTCATATCCAGATaGGAGCAGCCAACACGGCCG +
Preference number: 3 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRLFISR*EQPTRP
Trigger: CGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAG...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 3 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR GCA 72 bp CAGGATGGTTCGTACACTTACTACTTTTCTGTGCCGTaGATCATATGCTTCTGGACAGTTTCCAAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: QDGSYTYYFSVP*IICFWTVSKGL
Trigger: GAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTGTACGAACCATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CCA 72 bp ACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTaGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGA +
Preference number: 3 (lower is better)
Translates to: TYYFSVPCIICF*TVSKGLRKSRR
Trigger: TCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR GCA 72 bp TCGTACACTTACTACTTTTCTGTGCCGTGCATCATATaGTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGT +
Preference number: 3 (lower is better)
Translates to: SYTYYFSVPCII*FWTVSKGLRKS
Trigger: ACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTGTACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CCA 72 bp TCATGTCACTTGAGTGAGTTTGGCAGTGTAACAGGATaGTTCGTACACTTACTACTTTTCTGTGCCGTGCAT +
Preference number: 3 (lower is better)
Translates to: SCHLSEFGSVTG*FVHLLLFCAVH
Trigger: ATGCACGGCACAGAAAAGTAGTAAGTGTACGAACCATCCTGTTACACTGCCAAACTCACTCAAGTGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGAGGACAGAGACTCATTaGAACATGCATAGGTTAATA +
Preference number: 3 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQRTETH*NMHRLI
Trigger: TATTAACCTATGCATGTTCAAATGAGTCTCTGTCCT...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR-3UTR CAA 90 bp AACGAAAAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTAAAGAAAGTATGCTTTaGCAAAAGGTCCATAGATGG +
Preference number: 3 (lower is better)
Translates to: NEKKVSVGGTLRTRMKNIKESML*QKVHRW
Trigger: CCATCTATGGACCTTTTGCAAAAGCATACTTTCTTT...AATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTTCGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTGCTCCGCTACGCCCTaGTCGGGAGGGCCCCGCACC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLCSATP*SGGPRT
Trigger: GGTGCGGGGCCCTCCCGACCAGGGCGTAGCGGAGCA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp CCTGAGCAGCTCGGCAGAGCCCAAGGACTCGGCCATGGTGCGCACCAGGTAGAGCGAGAACCTGAGTGCTaGAGGGTCCCACGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PEQLGRAQGLGHGAHQVEREPEC*RVPRRG
Trigger: GCCGCGCCGTGGGACCCTCCAGCACTCAGGTTCTCG...CTCTACCTGGTGCGCACCATGGCCGAGTCCTTGGGCTCTGCCGAGCTGCTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR TCA 90 bp GAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCACCCGCTCAGCAAGGCTGGGTCATTaGAGGGCTCATGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: EQAARTSFNPGLTSPTRSARLGH*RAHAPS
Trigger: AGACGGGGCATGAGCCCTTCAATGACCCAGCCTTGC...TGAGCGGGTGGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp GAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCACCCGCTCACTCGCCCCGCAAGGCTaGGTCATTGAAGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EQAARTSFNPGLTSPTRSLAPQG*VIEGLM
Trigger: CATGAGCCCTTCAATGACCCAGCCTTGCGGGGCGAG...TGAGCGGGTGGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREAAWGS*AGPGSF
Trigger: GAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTGTAAAGCTGAGTGCTaGAGGGTCCCACGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLCKAEC*RVPRRG
Trigger: GCCGCGCCGTGGGACCCTCCAGCACTCAGCTTTACA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp ATGCCCAGAGACTTGAGCTGCCTGAGCAGCTCGGCAGAGCCCAAGGACTCGGCCCCCAGAGACTTGAGCTaGCTGAGCAGCTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MPRDLSCLSSSAEPKDSAPRDLS*LSSSAE
Trigger: CTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGG...GGCCGAGTCCTTGGGCTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGGAGGTTACCCAGTGGTaGGCCAGCGCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLEVTQW*ASAKPS
Trigger: TGATGGCTTGGCGCTGGCGCACCACTGGGTAACCTC...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGACTCGTCCACATGCATaGCCCCATTGCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLTRPHA*PHCWAE
Trigger: CTCTGCCCAGCAATGGGGTCATGCATGTGGACGAGT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGCGTTCTTCTTCTTCTTaGTGGCCTGCCGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLRSSSS*WPAAAA
Trigger: AGCCGCTGCGGCAGGCCATCAAGAAGAAGAAGAACG...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGTCCTGGGCGGGCCCTaGGAGTTTCCTTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREVLGGP*EFPWPS
Trigger: ACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGAC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCAGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGAAAWGS*AGPGSF
Trigger: GAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGC...TGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTGGAAAGGAGCCGCGTaGAGCAGGTCACACACTTCT +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLWKGAA*SRSHTS
Trigger: AGAAGTGTGTGACCTGCTGCACGCGGCTCCTTTCCA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCACCCGCTCAAAAGGGGTAGGTAGGTaGACGACTGCCTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: EQAARTSFNPGLTSPTRSKGVGR*TTASET
Trigger: CGTTTCTGAGGCAGTCGTGCACCTACCTACCCCTTT...TGAGCGGGTGGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTACACTTCCATCACGTaGGCGCTCCACTGCGACAAC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLYTSIT*ALHCDN
Trigger: GTTGTCGCAGTGGAGCGCGCACGTGATGGAAGTGTA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp AGAGCCCAAGGACTCGGCCATGGTGCGCACCAGGTAGAGTTGGGTGGGAAACAGCTCGCCCCGCAAGGCTaGGTCATTGAAGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: RAQGLGHGAHQVELGGKQLAPQG*VIEGLM
Trigger: CATGAGCCCTTCAATGACCCAGCCTTGCGGGGCGAG...CTGTTTCCCACCCAACTCTACCTGGTGCGCACCATGGCCGAGTCCTTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGGTAGAGCAGCGAGGATaGCGGGGGCTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLVEQRG*RGLDAG
Trigger: CCCTGCATCGAGCCCCCGCCATCCTCGCTGCTCTAC...CAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGGCTTCCTCCAGGTCATaGGCACAGGTAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLASSRS*AQVTER
Trigger: CCTCTCTGTTACCTGTGCCCATGACCTGGAGGAAGC...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTGGCAGGGAGGGTGGCTaGCACCACGCACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFGREGG*HHAQAE
Trigger: CTCGGCCTGTGCGTGGTGCCAGCCACCCTCCCTGCC...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGACGATTGAGGTCTATTaGTCTGCCGAGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLTIEVY*SAEELH
Trigger: GTGCAGCTCCTCGGCAGATCAATAGACCTCAATCGT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGGCAAAACGCCGCTGCTaGCCAAGAAGTACGATGATC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLAKRRC*PRSTMI
Trigger: GATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGC...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTCTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCAAACGTGTTAACCGCATaGAAGAGCCTCTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LCLSRQRGPHLTRASPAPNVLTA*KSLSMP
Trigger: GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTT...TGGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp TCTCTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCAACGTGTTAACCGCATaGAAGAGCCTCTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: SLPEQAARTSFNPGLTSPNVLTA*KSLSMP
Trigger: GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTT...GGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAGCGTCTTCACGTACTaGAGGATTGTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLSVFTY*RIVPCS
Trigger: GCTGCAAGGCACAATCCTGCAGTACGTGAAGACGCT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTACGGAGTGCAGCGCGTaGCCTCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFTECSA*PQLLAR
Trigger: CCTCGCCAGCAGCTGAGGGCACGCGCTGCACTCCGT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGGTAGAGCAGCGAGGATaGCGGGGGCTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLVEQRG*RGLDAG
Trigger: CCCTGCATCGAGCCCCCGCCATCCTCGCTGCTCTAC...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR CCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAATTTCACCTGTGGGATaGCCCGGGAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREISPVG*PGSSSS
Trigger: GGAGGAGCTGCTCCCGGGCCATCCCACAGGTGAAAT...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CCA 90 bp CTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCCGAGAACCTGAGTGCTaGAGGGTCCCACGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LRNVLTACKSLSMPRDLSREPEC*RVPRRG
Trigger: GCCGCGCCGTGGGACCCTCCAGCACTCAGGTTCTCG...GCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
3UTR CAA 72 bp TTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCGGCAGAGCCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LTACKSLSMPRD*SCLSSSAEPKD
Trigger: GTCCTTGGGCTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGCCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCCAGCTCCAGCCATGTaGGCCCTGTGGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFPAPAM*ALWIGD
Trigger: GTCCCCGATCCACAGGGCTCACATGGCTGGAGCTGG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CACGACTGCCTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGACAAGGGACGAGAACCTaGGTGCTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: HDCLRNVLTACKSLSMPRQGTRT*VLEGPT
Trigger: CGTGGGACCCTCCAGCACTCAGGTTCTCGTCCCTTG...TCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAGGCAGTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp CTTTCTCTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCTCATTGAAGGGCTCATaGCCCGTCTCCCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: LSLPEQAARTSFNPGLTSSLKGS*PVSQSH
Trigger: GTGTGACTGGGAGACGGGGCATGAGCCCTTCAATGA...GCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp TTTCTCTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCTCATTGAAGGGCTCATaGCCCGTCTCCCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: FLCLSRQRGPHLTRASPASLKGS*PVSQSH
Trigger: GTGTGACTGGGAGACGGGGCATGAGCCCTTCAATGA...GGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGGGAGAGCCGTACTCGTaGCGGGGCAGGCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRGEPYS*RGRRQI
Trigger: GATCTGCCGCCTGCCCCGGCACGAGTACGGCTCTCC...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GACTTGAGCTGCCTGAGCAGCTCGGCAGAGCCCAAGGACTCGGCCATGGTGCGCTTTCTATGTCCAATATaGTGGGCCCCTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: DLSCLSSSAEPKDSAMVRFLCPI*WAPQGY
Trigger: GTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA...GCGCACCATGGCCGAGTCCTTGGGCTCTGCCGAGCTGCTCAGGCAGCTCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp CTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCCCACCTTTCTATGTCCAATATaGTGGGCCCCTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LPEQAARTSFNPGLTSPTFLCPI*WAPQGY
Trigger: GTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA...GGTGGGGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGCGCACATGCTCCACTaGCGTGCCCTCCCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPAHMLH*RALPVA
Trigger: GGCGACGGGGAGGGCACGCCAGTGGAGCATGTGCGC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CGACTGCCTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGAGCAAGGCTGGGTCATTaGAGGGCTCATGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: RLPQKRVNRMQEPLHAQRARLGH*RAHAPS
Trigger: AGACGGGGCATGAGCCCTTCAATGACCCAGCCTTGC...TCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAGGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCCTCCCGTAGGGCGCTaGCACGTTGTGGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGPPVGR*HVVVGL
Trigger: GAGGCCAACCACAACGTGTCAGCGCCCTACGGGAGG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGGAAAGGTCACAGCACTaGTGCAGCGTTTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLERSQH*CSVSLK
Trigger: TTTCAGTGAAACGCTGCAGCAGTGCTGTGACCTTTC...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGGAGAGCCGTACTCGTaGCGGGGCAGGCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPGEPYS*RGRRQI
Trigger: GATCTGCCGCCTGCCCCGGCACGAGTACGGCTCTCC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCATGCTCCACTGGCGTaGCCTCCCCGTCGCCTGACT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGHAPLA*PPRRLT
Trigger: AGTCAGGCGACGGGGAGGGCACGCCAGTGGAGCATG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCCCGAGGGCCTCCCCTaGCAATGGTGCTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGPEGLP*QWCWYP
Trigger: GGGATACCAGCACCATTGGCAGGGGAGGCCCTCGGG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAAACGCATTTCACCTGTGGGATaGCCCGGGAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRISPVG*PGSSSS
Trigger: GGAGGAGCTGCTCCCGGGCCATCCCACAGGTGAAAT...GCGTTTCAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGTTACATTTCACCTGTaGGATGGCCCGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREVTFHL*DGPGAA
Trigger: AGCTGCTCCCGGGCCATCCCACAGGTGAAATGTAAC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCTGGGCCGCCATCCTaGGCTGGAACAACACATAAG +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGAPGPPS*AGTTHK
Trigger: CTTATGTGTTGTTCCAGCCCAGGATGGCGGCCCAGG...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CCA 90 bp GTGCACGACTGCCTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCCCAAGGACTCGGCCATaGTGCGCACCAGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: VHDCLRNVLTACKSLSMPPRTRP*CAPGRV
Trigger: AACTCTACCTGGTGCGCACCATGGCCGAGTCCTTGG...GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAGGCAGTCGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTCAGCAGCTCCTCCATaGCCACGGCGATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFSAAPP*PRRYPG
Trigger: ACCAGGGTATCGCCGTGGTCATGGAGGAGCTGCTGA...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAATTTTGTAGGAACGTaGTGGCAACAATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLNFVGT*WQQSAA
Trigger: GGCTGCTGATTGTTGCCATCACGTTCCTACAAAATT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTTCATGTCACTTGAGTaGGTTTGGCAGTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLFMSLE*VWQCNR
Trigger: CCTGTTACACTGCCAAACTCACTCAAGTGACATGAA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGATCTGGAGAGGGAATaGGCATTAACAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREDLERE*ALTGQV
Trigger: CACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCAGCCTCCGGCAGAGATaGGGGAGAAGACCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGSLRQR*GRRPAP
Trigger: TGGGGCTGGTCTTCTCCCTCATCTCTGCCGGAGGCT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR TCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGGATCTGGAGAGGGAATaGGCATTAACAGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLDLERE*ALTGQA
Trigger: CGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATC...CAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR GCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTGTACTGAGGGCTGCTaGCGGAGGATGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFCTEGC*RRMCTS
Trigger: GGACGTGCACATCCTCCGGCAGCAGCCCTCAGTACA...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAGGTCACAGCACTGCTaGAGCGTTTCACTGAAATTT +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLRSQHC*SVSLKF
Trigger: AAATTTCAGTGAAACGCTGCAGCAGTGCTGTGACCT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCCAGCACATCCTGCCTaGTGTTGCAGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGPAHPA*CCSLAG
Trigger: CCCAGCCAGGCTGCAACAGCAGGCAGGATGTGCTGG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAGTAGACAAACTGCATaGCACTCCACAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLSRQTA*HSTVCE
Trigger: TTCACAGACTGTGGAGTGCCATGCAGTTTGTCTACT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GACTGCCTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTCCCACGGCGCGGCGTaGTACTTTTATGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: DCLRNVLTACKSLSMPRDSHGAA*YFYVEA
Trigger: GGCTTCGACATAAAAGTACCACGCCGCGCCGTGGGA...GTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp AGAGCCCAAGGACTCGGCCATGGTGCGCACCAGGTAGAGTTGGGTGGGAAACAGCTATGTCCAATATGGTaGGCCCCTCAAGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: RAQGLGHGAHQVELGGKQLCPIW*APQGYF
Trigger: GAAGTAGCCTTGAGGGGCCCACCATATTGGACATAG...CTGTTTCCCACCCAACTCTACCTGGTGCGCACCATGGCCGAGTCCTTGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCATCGTTCTGGTGTGTGTaGGTGCAGATCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGASFWCV*VQIWRG
Trigger: CCCTCTCCAGATCTGCACCCACACACACCAGAACGA...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR TCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAATCCAGGTGTACAGCATaGCAGCATATTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLERESRCTA*QHILGP
Trigger: AGGGCCAAGAATATGCTGTCATGCTGTACACCTGGA...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTACAGGCTCTGCTCGATaGGCAGGCAGAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFTGSAR*AGRRGW
Trigger: CCATCCTCTTCTGCCTGCTCATCGAGCAGAGCCTGT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCCACTGGGCCTGACTaGTCTCCTCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRPTGPD*SPPTLL
Trigger: CAGCAATGTGGGAGGAGATCAGTCAGGCCCAGTGGG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTGGAACTGGATCCTCCTaGCCATGGTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFGTGSS*PWSAPG
Trigger: TCCTGGAGCTGACCATGGGCAGGAGGATCCAGTTCC...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGGAAGGCTGGACTCGGTaGTCCCGGTCCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTREGWTR*SRSLCA
Trigger: TGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTC...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCCCGAGGGCCTCCCCTaGCAATGGTGCTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPPEGLP*QWCWYP
Trigger: GGGATACCAGCACCATTGGCAGGGGAGGCCCTCGGG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTCAGAAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTCCCACGGCGCGGCGTaGTACTTTTATGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRNVLTACKSLSMPRDLSSHGAA*YFYVEA
Trigger: GGCTTCGACATAAAAGTACCACGCCGCGCCGTGGGA...GCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGTCCTGGGCGGGCCCTaGGAGTTTCCTTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPVLGGP*EFPWPS
Trigger: ACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGAC...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAAACGCGTTACATTTCACCTGTaGGATGGCCCGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRVTFHL*DGPGAA
Trigger: AGCTGCTCCCGGGCCATCCCACAGGTGAAATGTAAC...GCGTTTCAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCCGCGTCCGTCTTCTaGGCCTCCTGGCGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSASVF*ASWRPE
Trigger: CTCGGGCCGCCAGGAGGCCCAGAAGACGGACGCGGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGCGCACATGCTCCACTaGCGTGCCCTCCCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRAHMLH*RALPVA
Trigger: GGCGACGGGGAGGGCACGCCAGTGGAGCATGTGCGC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGAAACGCCCTGGGCCGCCATCCTaGGCTGGAACAACACATAAG +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRPGPPS*AGTTHK
Trigger: CTTATGTGTTGTTCCAGCCCAGGATGGCGGCCCAGG...GCGTTTCAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR CCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCTCCTCCCACATTGCTaGCTTCCTCCAGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFLLPHC*LPPGHG
Trigger: CCCATGACCTGGAGGAAGCCAGCAATGTGGGAGGAG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACTGGAGGTTACCCAGTaGTGCGCCAGCGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPLEVTQ*CASAKP
Trigger: TGGCTTGGCGCTGGCGCACCACTGGGTAACCTCCAG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGGCCTGTTCCAGCCTGTaGCTCCTGCCTGGAGGTTAC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRACSSL*LLPGGY
Trigger: GTAACCTCCAGGCAGGAGCCACAGGCTGGAACAGGC...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGTCGTTCTGGTGTGTGTaGGTGCAGATCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLSFWCV*VQIWRG
Trigger: CCCTCTCCAGATCTGCACCCACACACACCAGAACGA...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCACACACGGTCTTCCTaGTGGCCTGCAGGACACTCT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGHTRSS*WPAGHS
Trigger: AGAGTGTCCTGCAGGCCATCAGGAAGACCGTGTGTG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGGCGGCCCGAGCCCGTaGCCACCTCGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKGGPSP*PPRCCC
Trigger: ACAGCAACAGCGAGGTGGTCACGGGCTCGGGCCGCC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCTTATACATGGCTGCTaGGACGCGCTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFLIHGC*DALGDQ
Trigger: CTGATCACCCAGCGCGTCTCAGCAGCCATGTATAAG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCAGCCGGCAGATGACTTaGAAGTGTGGAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGSRQMT*KCGGPT
Trigger: CGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAACTGGGCCAGAGACATTaGATTTTCAGAACCAGCATG +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLERELGQRH*IFRTSM
Trigger: CATGCTGGTTCTGAAAATTCAATGTCTCTGGCCCAG...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR TCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGGCACCCTTGAAACGCTaGCAAAGGTTTTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLAPLKR*QRFSLG
Trigger: GCCCAGAGAAAACCTTTGTCAGCGTTTCAAGGGTGC...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR TCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAAACGCGCACCCTTGAAACGCTaGCAAAGGTTTTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRAPLKR*QRFSLG
Trigger: GCCCAGAGAAAACCTTTGTCAGCGTTTCAAGGGTGC...GCGTTTCAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCGAGGGCCGTCCCCCTaGCCCTCCTGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIRGPSP*PSCRAS
Trigger: GCTGGCTCTGCAGGAGGGTCAGGGGGACGGCCCTCG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACCCAGAGACTTGAGCTaGCTGAGCAGCTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPPRDLS*LSSSAE
Trigger: CTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGAACTGCCTCCTCCCATaGCATTTTAATACTACAGAT +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLNCLLP*HFNTTD
Trigger: ATCTGTAGTATTAAAATGGCATGGGAGGAGGCAGTT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCTCCCCTGCCAATGGTaGTGGTATCCCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRLPCQW*WYPMQL
Trigger: GAGCTGCATGGGATACCAGCACCATTGGCAGGGGAG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGAACCACTTTTGGACGAGAACCTGAGTaGTGGAGGGTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: QYGGPLKATSQGFLGTTFGREPE*WRVPRR
Trigger: GCGCCGTGGGACCCTCCAGCACTCAGGTTCTCGTCC...AAAAGTGGTTCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACGCGGCAAGATGTTCTaGAAAGGAGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPRGKMF*KGAACS
Trigger: GCTGCACGCGGCTCCTTTCCAGAACATCTTGCCGCG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKAAWGS*AGPGSF
Trigger: GAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCCGCGTCCGTCTTCTaGGCCTCCTGGCGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISASVF*ASWRPE
Trigger: CTCGGGCCGCCAGGAGGCCCAGAAGACGGACGCGGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGCATCCAGCTCAACTATaGAGGTCAAATCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLHPAQL*RSNLHF
Trigger: AAAGTGAAGATTTGACCTCCATAGTTGAGCTGGATG...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGACCTCCCGCAGGTTCTaGAAGCACACCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRTSRRF*KHTVFS
Trigger: GCTGAAGACGGTGTGCTTCCAGAACCTGCGGGAGGT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGCGCACATGCTCCACTaGCGTGCCCTCCCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIAHMLH*RALPVA
Trigger: GGCGACGGGGAGGGCACGCCAGTGGAGCATGTGCGC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAAACGCTCCAGCATCTCGTTCTaGTGTGTGTGGGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRSSISF*CVWVQI
Trigger: GATCTGCACCCACACACACCAGAACGAGATGCTGGA...GCGTTTCAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGGGACCAGGGGCAGCTaGGCCACATTCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKGTRGS*ATFCVR
Trigger: GCGGACGCAGAATGTGGCTCAGCTGCCCCTGGTCCC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610365.4
CDS-3UTR TCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCATCCAGGTGTACAGCATaGCAGCATATTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGASRCTA*QHILGP
Trigger: AGGGCCAAGAATATGCTGTCATGCTGTACACCTGGA...TGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTGTGGGTCATGCGGTTaGTTTCCAACAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFCGSCG*FPTGHP
Trigger: TGGATGGCCTGTTGGAAATCAACCGCATGACCCACA...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAGCCGGCAGATGACTTaGAAGTGTGGAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPSRQMT*KCGGPT
Trigger: CGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCGAGAAGCCGGCAGATaGCTTGAAAGTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRREAGR*LESVEV
Trigger: GACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCAAAGGCATGCCATGTTaGGTTACGGAGTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGKGMPC*VTECSA
Trigger: CGCGCTGCACTCCGTAACTCAACATGGCATGCCTTT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCAGCTCCAGCCATGTaGGCCCTGTGGATCGGGGAC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRPAPAM*ALWIGD
Trigger: GTCCCCGATCCACAGGGCTCACATGGCTGGAGCTGG...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCTCATTGAAGGGCTCATaGCCCGTCTCCCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGSLKGS*PVSQSH
Trigger: GTGTGACTGGGAGACGGGGCATGAGCCCTTCAATGA...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp ATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGAACCACCCAGAGACTTGAGCTaGCTGAGCAGCTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MSNMVGPSRLLLKVFLEPPRDLS*LSSSAE
Trigger: CTCTGCCGAGCTGCTCAGGCAGCTCAAGTCTCTGGG...TGGTTCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp AAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTGCCTAAAGGGGTAGGTAGGTaGACGACTGCCTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: KRVNRMQEPLHAQRLELPKGVGR*TTASET
Trigger: CGTTTCTGAGGCAGTCGTGCACCTACCTACCCCTTT...AGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGCGCGTGCCCTCAGCTaGTGGCGAGGGACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIARALS*WRGTGG
Trigger: TCCACCAGTCCCTCGCCAGCAGCTGAGGGCACGCGC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCACGGAGTGCAGCGCGTaGCCTCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGITECSA*PQLLAR
Trigger: CCTCGCCAGCAGCTGAGGGCACGCGCTGCACTCCGT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCACGCGGCCACGTTGCTaGTGCTTTGGGGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGTRPRC*CFGERT
Trigger: TGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp GATGAAATTTTTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGGGACGAGAACCTGAGTaGTGGAGGGTCCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: DEIFLCPIWWAPQGYFSRGREPE*WRVPRR
Trigger: GCGCCGTGGGACCCTCCAGCACTCAGGTTCTCGTCC...CCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAAAAATTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTCCCCCTCTTTCACATaGACTCGCGGCAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFSPSFT*TRGKMF
Trigger: GAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGA...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACCCCCTCTCTTGCGATaGCAATTTGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPPPLLR*QFAEGS
Trigger: GGACCCCTCAGCAAATTGCCATCGCAAGAGAGGGGG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIAAWGS*AGPGSF
Trigger: GAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGTAGAGCAGCGAGGATaGCGGGGGCTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRVEQRG*RGLDAG
Trigger: CCCTGCATCGAGCCCCCGCCATCCTCGCTGCTCTAC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAAGTTAGTGTTGAAATTTaGCTGGTAGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ALLQHLVLVCVGADLEREVSVEI*LVEQRG
Trigger: TCCTCGCTGCTCTACCAGCCAAATTTCAACACTAAC...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGTGGAGTACTTGTCGGTaGGGTGCACAAGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRWSTCR*GAQASR
Trigger: CCTGGAAGCTTGTGCACCCCACCGACAAGTACTCCA...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGTCATCGATGCCTCCTTaGTCTCCAGGATGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRSSMPP*SPGCGP
Trigger: CGGACCACATCCTGGAGACCAAGGAGGCATCGATGA...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGGCGGGAGGTGGATCGTaGCTCCCTGATTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRAGGGS*LPDSCI
Trigger: AATGCAAGAATCAGGGAGCCACGATCCACCTCCCGC...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCTAGGGACTTATACATaGCTGCTGAGACGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRLGTYT*LLRRAG
Trigger: CCCAGCGCGTCTCAGCAGCCATGTATAAGTCCCTAG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCGGCTCAGCAGCTTGTaGGTCATGCGGTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRRLSSL*VMRLIS
Trigger: GGAAATCAACCGCATGACCCACAAGCTGCTGAGCCG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCGTGCCCTCAGCTGCTaGCGAGGGACTGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPRALSC*RGTGGW
Trigger: CCATCCACCAGTCCCTCGCCAGCAGCTGAGGGCACG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGGAGCGGTATATGGGATaGTGTCACGGTCCCATCCCA +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRERYMG*CHGPIP
Trigger: TGGGATGGGACCGTGACACCATCCCATATACCGCTC...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGAAACGCTCCAGCATCTCGTTCTaGTGTGTGTGGGTGCAGATC +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRSSISF*CVWVQI
Trigger: GATCTGCACCCACACACACCAGAACGAGATGCTGGA...GCGTTTCAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR TCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCTTGCAGCAGGCTCTTaGCGACCTTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPLAAGS*RPSAAP
Trigger: AGGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGTTTCCTTGGCCGAGTaGGTCACTCGGGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIVSLAE*VTRAGR
Trigger: CCGGCCAGCCCGAGTGACTCACTCGGCCAAGGAAAC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGAATCCGGCTTCCTCTaGGCATTCGATGGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPESGFL*AFDGLS
Trigger: GCTAAGGCCATCGAATGCTCAGAGGAAGCCGGATTC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGAAATTTTTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGCAAGGGACGAGAACCTaGGTGCTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: DEIFLCPIWWAPQGYFSRQGTRT*VLEGPT
Trigger: CGTGGGACCCTCCAGCACTCAGGTTCTCGTCCCTTG...CCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAAAAATTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCCGAAGTTCCGGTAGCTaGCGTAAATGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGRSSGS*RKCWSR
Trigger: CCTACTCCAGCATTTACGGCAGCTACCGGAACTTCG...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGGAGAGCCGTACTCGTaGCGGGGCAGGCGGCAGATC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIGEPYS*RGRRQI
Trigger: GATCTGCCGCCTGCCCCGGCACGAGTACGGCTCTCC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCACGGAGTGCAGCGCGTaGCCTCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATITECSA*PQLLAR
Trigger: CCTCGCCAGCAGCTGAGGGCACGCGCTGCACTCCGT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCAGCCTGTGGCTCCTaGCTGGAGGTTACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRPACGS*LEVTQW
Trigger: CCACTGGGTAACCTCCAGGCAGGAGCCACAGGCTGG...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCAGCCTGTGGCTCCTaGCTGGAGGTTACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPPACGS*LEVTQW
Trigger: CCACTGGGTAACCTCCAGGCAGGAGCCACAGGCTGG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCCGAGGGGTCCGGGTaGCTGTCTACGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPEGSG*LSTRPR
Trigger: ACGTGGCCGCGTAGACAGGCACCCGGACCCCTCGGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCCCCCTCTCTTGCGATaGCAATTTGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPPPLLR*QFAEGS
Trigger: GGACCCCTCAGCAAATTGCCATCGCAAGAGAGGGGG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGAGGCCCGCGCCAGATaGGGTCATCCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQREARAR*GHPESS
Trigger: GGAGCTTTCTGGATGACCCCATCTGGCGCGGGCCTC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGTCCTGGGCGGGCCCTaGGAGTTTCCTTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIVLGGP*EFPWPS
Trigger: ACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGAC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGTCTTCTGGGCCTCCTaGCGGCCCGAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSVFWAS*RPEPVT
Trigger: GGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCTGTGGCTCCTGCCTaGAGGTTACCCAGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPPVAPA*RLPSGA
Trigger: CGCACCACTGGGTAACCTCCAGGCAGGAGCCACAGG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGGGAGGCAGGGAGGGTaGCTGGCACCACGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEGRQGG*LAPRTG
Trigger: GCCTGTGCGTGGTGCCAGCCACCCTCCCTGCCTCCC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGCGCCAGCTCCGAAATaGAGCGCATGTGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKAPAPK*SACGPR
Trigger: GCGAGGACCACATGCGCTTCATTTCGGAGCTGGCGC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCTGGATCGTGGCTCCCTaGTTCTTGCATTCTGATCGT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGWIVAP*FLHSDR
Trigger: ACGATCAGAATGCAAGAATCAGGGAGCCACGATCCA...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACGATTGAGGTCTATTaGTCTGCCGAGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPTIEVY*SAEELH
Trigger: GTGCAGCTCCTCGGCAGATCAATAGACCTCAATCGT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACCTCCCGTAGGGCGCTaGCACGTTGTGGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQPPVGR*HVVVGL
Trigger: GAGGCCAACCACAACGTGTCAGCGCCCTACGGGAGG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTGTAACAGAGAGGCACTaGGTAGCCTCTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFVTERH*VASSYP
Trigger: TGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTAC...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGAACTCAAAAAGCCCATaGGAGAAGGACTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRNSKSP*EKDCSA
Trigger: AGCGGAGCAGTCCTTCTCTCATGGGCTTTTTGAGTT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGACTTCGAGCTGCTGCTaGAGAGACTGTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRTSSCC*RDCVIL
Trigger: CAAGATCACACAGTCTCTGCAGCAGCAGCTCGAAGT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAACAGCTGCAGGCCCTaGAGCGCCAGGTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGINSCRP*SARSKS
Trigger: GCTCTTCGACCTGGCGCTGCAGGGCCTGCAGCTGTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAACGTGCGCGCTCCACTaGGACAACAGCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQTCALH*DNSCRP
Trigger: GGGCCTGCAGCTGTTGTCGCAGTGGAGCGCGCACGT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCATGCTCCACTGGCGTaGCCTCCCCGTCGCCTGACT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIHAPLA*PPRRLT
Trigger: AGTCAGGCGACGGGGAGGGCACGCCAGTGGAGCATG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACATGCTCCACTGGCGTaGCCTCCCCGTCGCCTGACT +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQHAPLA*PPRRLT
Trigger: AGTCAGGCGACGGGGAGGGCACGCCAGTGGAGCATG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCAGGTTAGAGTTCCTTaGCAAGCCAGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPQVRVP*QARQHR
Trigger: CCTGTGCTGCCTGGCTTGGCAAGGAACTCTAACCTG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTGGTGCTGGTATCCCATaGAGCTCACCACTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPGAGIP*SSPLAA
Trigger: CGCAGCCAGTGGTGAGCTGCATGGGATACCAGCACC...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCCAGCACATCCTGCCTaGTGTTGCAGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKPAHPA*CCSLAG
Trigger: CCCAGCCAGGCTGCAACAGCAGGCAGGATGTGCTGG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATCCCCCTCTTTCACATaGACTCGCGGCAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPSPSFT*TRGKMF
Trigger: GAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCCTGGGCCGCCATCCTaGGCTTCAGAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIPGPPS*ASEPAP
Trigger: TGGAGCTGGCTCTGAAGCCCAGGATGGCGGCCCAGG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610365.4
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGTAGAGCAGCGAGGATaGCGGGGGCTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQVEQRG*RGLDAG
Trigger: CCCTGCATCGAGCCCCCGCCATCCTCGCTGCTCTAC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAAACGCGTTAGTGTTGAAATTTaGCTGGTAGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: CRSGEGMSINRAGAPLKRVSVEI*LVEQRG
Trigger: TCCTCGCTGCTCTACCAGCCAAATTTCAACACTAAC...GCGTTTCAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGATTTCACCTGTGGGATaGCCCGGGAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRISPVG*PGSSSS
Trigger: GGAGGAGCTGCTCCCGGGCCATCCCACAGGTGAAAT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACAAACTTCTCCTCGCTaGTGTAGTTGTAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPQTSPR*CSCSAW
Trigger: CCACGCGCTACAACTACACCAGCGAGGAGAAGTTTG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTGTAAAGCTGAGTGCTaGAGGGTCCCACGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGICKAEC*RVPRRG
Trigger: GCCGCGCCGTGGGACCCTCCAGCACTCAGCTTTACA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCCTGTGGCTCCTGCCTaGAGGTTACCCAGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKPVAPA*RLPSGA
Trigger: CGCACCACTGGGTAACCTCCAGGCAGGAGCCACAGG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCTGTTGCAGCCTGGCTaGGTTTATTCTTCAGTTACC +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFLLQPG*VYSSVT
Trigger: GGTAACTGAAGAATAAACCCAGCCAGGCTGCAACAG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGTTACACATGCTAGAGTaGACGGTGGCTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLLHMLE*TVACSM
Trigger: CATTGAACAAGCCACCGTCCACTCTAGCATGTGTAA...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCATTATACATGCTAGAGTaGACGGTGGCTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGALYMLE*TVACSM
Trigger: CATTGAACAAGCCACCGTCCACTCTAGCATGTATAA...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR TCA 90 bp GTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAGCACTGCTCGACTGTaGACTCGTGTGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: VSVGGTLRTRMKNIARNKSTARL*TRVSPR
Trigger: CCGTGGGGACACACGAGTTCACAGTCGAGCAGTGCT...CTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR TCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGATCAGGTAGGCTTCTaGCACGAAGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPDQVGF*HEVLPP
Trigger: AGGAGGAAGGACTTCGTGTCAGAAGCCTACCTGATC...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTATTTTACGTAAAAACTaGGCGGCCCTCTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFILRKN*AALLYA
Trigger: AGCGTACAAGAGGGCCGCTCAGTTTTTACGTAAAAT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGCGCCAGCTCCGAAATaGAGCGCATGTGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQAPAPK*SACGPR
Trigger: GCGAGGACCACATGCGCTTCATTTCGGAGCTGGCGC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGCGGCCCGAGCCCGTaGCCACCTCGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSGGPSP*PPRCCC
Trigger: ACAGCAACAGCGAGGTGGTCACGGGCTCGGGCCGCC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATGGATCGTGGCTCCCTaGTTCTTGCATTCTGATCGT +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPWIVAP*FLHSDR
Trigger: ACGATCAGAATGCAAGAATCAGGGAGCCACGATCCA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCCTCCCGTAGGGCGCTaGCACGTTGTGGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSPPVGR*HVVVGL
Trigger: GAGGCCAACCACAACGTGTCAGCGCCCTACGGGAGG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCTTGCAGCAGGCTCTTaGCGACCTTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPLAAGS*RPSAAP
Trigger: AGGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCCCACTGGGCCTGACTaGTCTCCTCCCACATTGCTG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIPTGPD*SPPTLL
Trigger: CAGCAATGTGGGAGGAGATCAGTCAGGCCCAGTGGG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAATCAGTGGGACAAGATaGAGCGGGGCGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPISGTR*SGAYFD
Trigger: ATCAAAGTACGCCCCGCTGCATCTTGTCCCACTGAT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGGAGAAGTCCTGCAGTaGGGCATAGACGGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIGEVLQ*GIDGVP
Trigger: CGGCACACCGTCTATGCCGCACTGCAGGACTTCTCC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGTTCTTCTTGATGGCCTaGCGCAGCGGCTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRFFLMA*RSGSLR
Trigger: CCTTAGGGAGCCGCTGCGGCAGGCCATCAAGAAGAA...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAACTCAGGAGGAGCTCTaGCCTGGGATGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQTQEEL*PGMGPG
Trigger: CCCTGGTCCCATCCCAGGGCAGAGCTCCTCCTGAGT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610365.4
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTGTACTGAGGGCTGCTaGCGGAGGATGTGCACGTCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGICTEGC*RRMCTS
Trigger: GGACGTGCACATCCTCCGGCAGCAGCCCTCAGTACA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCCAGGTCGAAGAGCTTaGGGTACTCCGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIPGRRA*GTPRPS
Trigger: AGACGGACGCGGAGTACCGCAAGCTCTTCGACCTGG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCCCAGGTCGAAGAGCTTaGGGTACTCCGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECPGRRA*GTPRPS
Trigger: AGACGGACGCGGAGTACCGCAAGCTCTTCGACCTGG...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTACGTGCGCGCTCCACTaGGACAACAGCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSTCALH*DNSCRP
Trigger: GGGCCTGCAGCTGTTGTCGCAGTGGAGCGCGCACGT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCCGAGGAGCTGCACATaGCTCTGCTTCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKPRSCT*LCFSSV
Trigger: GACGCTGCTGAAGCAGAGGCATGTGCAGCTCCTCGG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCCGAGGAGCTGCACATaGCTCTGCTTCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIPRSCT*LCFSSV
Trigger: GACGCTGCTGAAGCAGAGGCATGTGCAGCTCCTCGG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCACCGTCTTCAGCTCTaGGTACTCCACGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPHRLQL*VLHDVL
Trigger: AAGGACATCGTGGAGTACGCAGAGCTGAAGACGGTG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGTERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGAAGGCTGGACTCGGTaGTCCCGGTCCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECEGWTR*SRSLCA
Trigger: TGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTGTGCCGTGCATCATATaGTTCTGGACAGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFVPCII*FWTVSK
Trigger: TTTGGAAACTGTCCAGAAGCATATGATGCACGGCAC...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGGTGCTGGTATCCCATaGAGCTCACCACTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECGAGIP*SSPLAA
Trigger: CGCAGCCAGTGGTGAGCTGCATGGGATACCAGCACC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCTCCCCTGCCAATGGTaGTGGTATCCCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPLPCQW*WYPMQL
Trigger: GAGCTGCATGGGATACCAGCACCATTGGCAGGGGAG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGAGGTTACCCAGTGGTaGGCCAGCGCCAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECEVTQW*ASAKPS
Trigger: TGATGGCTTGGCGCTGGCGCACCACTGGGTAACCTC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGCAAGCCAGCACATCCTaGCTGCTGTTGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQQASTS*LLLQPG
Trigger: GCCAGGCTGCAACAGCAGGCAGGATGTGCTGGCTTG...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGAGGCCCGCGCCAGATaGGGTCATCCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIEARAR*GHPESS
Trigger: GGAGCTTTCTGGATGACCCCATCTGGCGCGGGCCTC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCGCGGCAAGATGTTCTaGAAAGGAGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIRGKMF*KGAACS
Trigger: GCTGCACGCGGCTCCTTTCCAGAACATCTTGCCGCG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGCCAAGGACTCGGCCATaGTGCGCACCAGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQPRTRP*CAPGRA
Trigger: AGCTCTACCTGGTGCGCACCATGGCCGAGTCCTTGG...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCATTTCACCTGTGGGATaGCCCGGGAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIISPVG*PGSSSS
Trigger: GGAGGAGCTGCTCCCGGGCCATCCCACAGGTGAAAT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGTCTTCTGGGCCTCCTaGCGGCCCGAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSVFWAS*RPEPVT
Trigger: GGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTATCTCAATGGGGAACTaGATCCTCCTGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPISMGN*ILLPMV
Trigger: GACCATGGGCAGGAGGATCCAGTTCCCCATTGAGAT...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGCTGCTGAGACGCGCTaGGTGATCAGACGATTGAGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRAAETR*VIRRLR
Trigger: CCTCAATCGTCTGATCACCCAGCGCGTCTCAGCAGC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGATGACTTGAAAGTGTaGAGGTCCCACGAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPDDLKV*RSHEVP
Trigger: CGGAACTTCGTGGGACCTCCACACTTTCAAGTCATC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATCTTCATATCCAGATTaGAGCAGCCAACACGGCCGT +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPSSYPD*SSQHGR
Trigger: ACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCCTGCCAATGGTGCTaGTATCCCATGCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRPCQWC*YPMQLT
Trigger: GGTGAGCTGCATGGGATACCAGCACCATTGGCAGGG...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGGCCTCCCCTGCCAATaGTGCTGGTATCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIGLPCQ*CWYPMQ
Trigger: CTGCATGGGATACCAGCACCATTGGCAGGGGAGGCC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACCTGCTGTTGCAGCCTaGCTGGGTTTATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPPAVAA*LGLFFS
Trigger: ACTGAAGAATAAACCCAGCCAGGCTGCAACAGCAGG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCAGACAAAGGTTTTCTCTaGGCCAGAGACATTGAATTT +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGADKGFL*ARDIEF
Trigger: AAATTCAATGTCTCTGGCCCAGAGAAAACCTTTGTC...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGACTCGTCCACATGCATaGCCCCATTGCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQTRPHA*PHCWAE
Trigger: CTCTGCCCAGCAATGGGGTCATGCATGTGGACGAGT...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCACACACGGTCTTCCTaGTGGCCTGCAGGACACTCT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKHTRSS*WPAGHS
Trigger: AGAGTGTCCTGCAGGCCATCAGGAAGACCGTGTGTG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCGCAGATGTTGTACTaGGGGCTGCTGCCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISQMLY*GLLPED
Trigger: ATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCTCGCAGATGTTGTACTaGGGGCTGCTGCCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECSQMLY*GLLPED
Trigger: ATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGA...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAAGAAGACGTGCAGGGTaGTCCTCCCGTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSERRRAG*SSRRAL
Trigger: CAGCGCCCTACGGGAGGATCACCCTGCACGTCTTCT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAGAAGACGTGCAGGGTaGTCCTCCCGTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTRRRAG*SSRRAL
Trigger: CAGCGCCCTACGGGAGGATCACCCTGCACGTCTTCT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCAGCAGCTCCTCCATaGCCACGGCGATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISAAPP*PRRYPG
Trigger: ACCAGGGTATCGCCGTGGTCATGGAGGAGCTGCTGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGACAGGCTCTGCTCGATaGGCAGGCAGAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKTGSAR*AGRRGW
Trigger: CCATCCTCTTCTGCCTGCTCATCGAGCAGAGCCTGT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGGAGAAGTCCTGCAGTaGGGCATAGACGGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIGEVLQ*GIDGVP
Trigger: CGGCACACCGTCTATGCCGCACTGCAGGACTTCTCC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCATTGTTCAATGTATCTTaGGATGCCAGTAACAAATGC +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGALFNVS*DASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAA...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTGTTGTACTGAGGGCTaGTGCCGGAGGATGTGCACG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGICCTEG*CRRMCT
Trigger: CGTGCACATCCTCCGGCAGCAGCCCTCAGTACAACA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGGAACTGGATCCTCCTaGCCATGGTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIGTGSS*PWSAPG
Trigger: TCCTGGAGCTGACCATGGGCAGGAGGATCCAGTTCC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGTGGCTCCCTGATTCTTaGATTCTGATCGTAACCGTT +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRWLPDS*ILIVTV
Trigger: AACGGTTACGATCAGAATGCAAGAATCAGGGAGCCA...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTGGAAGCAGCGCACATaGTCCACTGGCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSWKQRT*STGVPS
Trigger: GGAGGGCACGCCAGTGGAGCATGTGCGCTGCTTCCA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGCGCGTGCCCTCAGCTaGTGGCGAGGGACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSARALS*WRGTGG
Trigger: TCCACCAGTCCCTCGCCAGCAGCTGAGGGCACGCGC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAGCAGTTCGCCTCCGTaGCATAAACGTCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPSSSPP*HKRQEK
Trigger: TTTCTCTTGACGTTTATGGCACGGAGGCGAACTGCT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCTACGCGGCCACGTTaGTGCTGCTTTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSTRPR*CCFGER
Trigger: TCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGAGGCCCGCGCCAGATaGGGTCATCCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEEARAR*GHPESS
Trigger: GGAGCTTTCTGGATGACCCCATCTGGCGCGGGCCTC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCCCACGGCGCGGCGTaGTACTTTTATGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISHGAA*YFYVEA
Trigger: GGCTTCGACATAAAAGTACCACGCCGCGCCGTGGGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTTCCTCCTCTCGGCATaGCACAGGCGCCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIFLLSA*HRRLTS
Trigger: GGAAGTGAGGCGCCTGTGCCATGCCGAGAGGAGGAA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTCTATGTCCAATATGGTaGGCCCCTCAAGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPLCPIW*APQGYF
Trigger: GAAGTAGCCTTGAGGGGCCCACCATATTGGACATAG...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCTTGGTCTCCAGGATGTaGTCCGTCAGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECLVSRM*SVRIQG
Trigger: GCCCTGGATCCTGACGGACCACATCCTGGAGACCAA...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCATCGATGCCTCCTTaGTCTCCAGGATGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSSMPP*SPGCGP
Trigger: CGGACCACATCCTGGAGACCAAGGAGGCATCGATGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGCTGCTGAGACGCGCTaGGTGATCAGACGATTGAGG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKAAETR*VIRRLR
Trigger: CCTCAATCGTCTGATCACCCAGCGCGTCTCAGCAGC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGGCGCTGACACGTTGTaGTTGGCCTCCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIGADTL*LASRNM
Trigger: CATGTTCCGGGAGGCCAACCACAACGTGTCAGCGCC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCAAGTTCAAAGCCTTaGATCCATGCAGATACTGAG +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRPSSKP*IHADTE
Trigger: CTCAGTATCTGCATGGATCCAAGGCTTTGAACTTGG...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGATGACTTGAAAGTGTaGAGGTCCCACGAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPDDLKV*RSHEVP
Trigger: CGGAACTTCGTGGGACCTCCACACTTTCAAGTCATC...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGTGCATCATATGCTTCTaGACAGTTTCCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISRLEQPTRCIICF*TVSKGL
Trigger: GAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACTGGAGGTTACCCAGTaGTGCGCCAGCGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTLEVTQ*CASAKP
Trigger: TGGCTTGGCGCTGGCGCACCACTGGGTAACCTCCAG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGCCTGTTCCAGCCTGTaGCTCCTGCCTGGAGGTTAC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQACSSL*LLPGGY
Trigger: GTAACCTCCAGGCAGGAGCCACAGGCTGGAACAGGC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCAGACAAAGGTTTTCTCTaGGCCAGAGACATTGAATTT +
Preference number: 4 (lower is better)
Translates to: GVCGCRSGEGMSINRAGADKGFL*ARDIEF
Trigger: AAATTCAATGTCTCTGGCCCAGAGAAAACCTTTGTC...TGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619037.1
3UTR CAA 72 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATaGGAGCAGCCAACACGGCCGTTTTACACCTCATTT +
Preference number: 4 (lower is better)
Translates to: NREALSSLFISR*EQPTRPFYTSF
Trigger: AAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTAACTCGTCCACATGCATaGCCCCATTGCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLTRPHA*PHCWAE
Trigger: CTCTGCCCAGCAATGGGGTCATGCATGTGGACGAGT...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAACTCGTCCACATGCATaGCCCCATTGCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQTRPHA*PHCWAE
Trigger: CTCTGCCCAGCAATGGGGTCATGCATGTGGACGAGT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACGTTCTTCTTCTTCTTaGTGGCCTGCCGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQRSSSS*WPAAAA
Trigger: AGCCGCTGCGGCAGGCCATCAAGAAGAAGAAGAACG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGCAAGGCTGGGTCATTaGAGGGCTCATGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSARLGH*RAHAPS
Trigger: AGACGGGGCATGAGCCCTTCAATGACCCAGCCTTGC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGGCCCTCTTGTACGCTaGGTGGTCGTTCTTCACACT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIGPLVR*VVVLHT
Trigger: AGTGTGAAGAACGACCACTCAGCGTACAAGAGGGCC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGCTTATACATGGCTGCTaGGACGCGCTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQLIHGC*DALGDQ
Trigger: CTGATCACCCAGCGCGTCTCAGCAGCCATGTATAAG...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCGAGAAGCCGGCAGATaGCTTGAAAGTGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKREAGR*LESVEV
Trigger: GACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCTTGCAGCAGGCTCTTaGCGACCTTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATILAAGS*RPSAAP
Trigger: AGGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTGTGTCCCCACGGGAATaGAGTAGACAAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPVSPRE*SRQTAW
Trigger: CCATGCAGTTTGTCTACTGCATTCCCGTGGGGACAC...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTGGAAAGGAGCCGCGTaGAGCAGGTCACACACTTCT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKWKGAA*SRSHTS
Trigger: AGAAGTGTGTGACCTGCTGCACGCGGCTCCTTTCCA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATTCTTCTTGATGGCCTaGCGCAGCGGCTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQFFLMA*RSGSLR
Trigger: CCTTAGGGAGCCGCTGCGGCAGGCCATCAAGAAGAA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGTCTTCCTGATGGCCTaGAGGACACTCTGGATGACG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIVFLMA*RTLWMT
Trigger: CGTCATCCAGAGTGTCCTGCAGGCCATCAGGAAGAC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGGAGAGGGGGCAATCTaGCTTCTGCTGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIGEGAI*LLLNLL
Trigger: GAGCAGATTCAGCAGAAGGCAGATTGCCCCCTCTCC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610365.4
CDS-3UTR GCA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGTTGTTCAATGTATCTTaGGATGCCAGTAACAAATGC +
Preference number: 4 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLLFNVS*DASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAA...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCGAGGAGCTGCACATaGCTCTGCTTCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPRSCT*LCFSSV
Trigger: GACGCTGCTGAAGCAGAGGCATGTGCAGCTCCTCGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCGAAGTTCCGGTAGCTaGCGTAAATGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPRSSGS*RKCWSR
Trigger: CCTACTCCAGCATTTACGGCAGCTACCGGAACTTCG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTAGCGTCTTCACGTACTaGAGGATTGTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSVFTY*RIVPCS
Trigger: GCTGCAAGGCACAATCCTGCAGTACGTGAAGACGCT...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACAAGCCAGCACATCCTaGCTGCTGTTGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEQASTS*LLLQPG
Trigger: GCCAGGCTGCAACAGCAGGCAGGATGTGCTGGCTTG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCGGCCACGTTGCTGCTaGTTTGGGGAAAGAACAACT +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPRPRCC*FGERTT
Trigger: AGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACGCGGCAAGATGTTCTaGAAAGGAGCCGCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSERGKMF*KGAACS
Trigger: GCTGCACGCGGCTCCTTTCCAGAACATCTTGCCGCG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACTCGCCCCGCAAGGCTaGGTCATTGAAGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSELAPQG*VIEGLM
Trigger: CATGAGCCCTTCAATGACCCAGCCTTGCGGGGCGAG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATCCCACGGCGCGGCGTaGTACTTTTATGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSHGAA*YFYVEA
Trigger: GGCTTCGACATAAAAGTACCACGCCGCGCCGTGGGA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAGTTAGTGTTGAAATTTaGCTGGTAGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPVSVEI*LVEQRG
Trigger: TCCTCGCTGCTCTACCAGCCAAATTTCAACACTAAC...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGAAATGAAGCGCATGTaGTCCTCGCGGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQREMKRM*SSRIWI
Trigger: GATCCAGATCCGCGAGGACCACATGCGCTTCATTTC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TTTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGCTATGTCCAATATGGTaGGCCCCTCAAGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: FLCPIWWAPQGYFSRFSWLCPIW*APQGYF
Trigger: GAAGTAGCCTTGAGGGGCCCACCATATTGGACATAG...CCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGCGGGAGGTGGATCGTaGCTCCCTGATTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIAGGGS*LPDSCI
Trigger: AATGCAAGAATCAGGGAGCCACGATCCACCTCCCGC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGCTGCTGAGACGCGCTaGGTGATCAGACGATTGAGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQAAETR*VIRRLR
Trigger: CCTCAATCGTCTGATCACCCAGCGCGTCTCAGCAGC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAGGCGCTGACACGTTGTaGTTGGCCTCCCGGAACATG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTGADTL*LASRNM
Trigger: CATGTTCCGGGAGGCCAACCACAACGTGTCAGCGCC...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTAGCTGCCGTAAATGCTaGAGTAGGCCAAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPSCRKC*SRPSSK
Trigger: CTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCT...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCACCTCCCGCAGGTTCTaGAAGCACACCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATITSRRF*KHTVFS
Trigger: GCTGAAGACGGTGTGCTTCCAGAACCTGCGGGAGGT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCGTGCCCTCAGCTGCTaGCGAGGGACTGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSRALSC*RGTGGW
Trigger: CCATCCACCAGTCCCTCGCCAGCAGCTGAGGGCACG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCCTGGGAGTTTCCTTaGCCGAGTGAGTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPWEFP*PSESLG
Trigger: CCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGAGGTGAGCGGTATATaGGATGGTGTCACGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECEVSGI*DGVTVP
Trigger: TGGGACCGTGACACCATCCCATATACCGCTCACCTC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCATGCAGCTCACCACTaGCTGCGTGGAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKHAAHH*LRGNSL
Trigger: AAGGGAGTTTCCACGCAGCCAGTGGTGAGCTGCATG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGGCCTCCCCTGCCAATaGTGCTGGTATCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEGLPCQ*CWYPMQ
Trigger: CTGCATGGGATACCAGCACCATTGGCAGGGGAGGCC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTCCAAGGAAACATTTGTaGGGGAGAAAATATACATGG +
Preference number: 4 (lower is better)
Translates to: EALSSLFISRLEQPTRPFPRKHL*GRKYTW
Trigger: CCATGTATATTTTCTCCCCCACAAATGTTTCCTTGG...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR TCA 90 bp GTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VSVGGTLRTRMKNIARNKAQEVR*SYSQPS
Trigger: ACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGC...CTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR TCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECAQEVR*SYSQPS
Trigger: ACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGATCAGGTAGGCTTCTaGCACGAAGTCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKDQVGF*HEVLPP
Trigger: AGGAGGAAGGACTTCGTGTCAGAAGCCTACCTGATC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTAGAAGACGTGCAGGGTaGTCCTCCCGTAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSRRRAG*SSRRAL
Trigger: CAGCGCCCTACGGGAGGATCACCCTGCACGTCTTCT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGATCCATGCAGATACTaGGGCTGTGCATTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKDPCRY*GCALGC
Trigger: GCAGCCTAATGCACAGCCTCAGTATCTGCATGGATC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGATCCATGCAGATACTaGGGCTGTGCATTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIDPCRY*GCALGC
Trigger: GCAGCCTAATGCACAGCCTCAGTATCTGCATGGATC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACAGGCTCTGCTCGATaGGCAGGCAGAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETGSAR*AGRRGW
Trigger: CCATCCTCTTCTGCCTGCTCATCGAGCAGAGCCTGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTAGCTGGCCTGGTATGTaGGTTCAGGTTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSWPGM*VQVRVP
Trigger: AGGAACTCTAACCTGAACTCACATACCAGGCCAGCT...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCAAACCTGTGCTGAGGTaGGCGGTATATGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECKPVLR*AVYGMV
Trigger: CACCATCCCATATACCGCTCACCTCAGCACAGGTTT...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGAAACCTGTGCTGAGGTaGGCGGTATATGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQKPVLR*AVYGMV
Trigger: CACCATCCCATATACCGCTCACCTCAGCACAGGTTT...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGAAGCTAAACCTGTGCTaGGGTGAGCGGTATATGGGA +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRKLNLC*GERYMG
Trigger: TCCCATATACCGCTCACCTCAGCACAGGTTTAGCTT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGATCAGTGGGACAAGATaGAGCGGGGCGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRISGTR*SGAYFD
Trigger: ATCAAAGTACGCCCCGCTGCATCTTGTCCCACTGAT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGTGTCCCCACGGGAATaGAGTAGACAAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIVSPRE*SRQTAW
Trigger: CCATGCAGTTTGTCTACTGCATTCCCGTGGGGACAC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGCAAAACGCCGCTGCTaGCCAAGAAGTACGATGATC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKAKRRC*PRSTMI
Trigger: GATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCACAGCAAAACGCCGCTaGTGCCCAAGAAGTACGATG +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGITAKRR*CPRSTM
Trigger: CATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATCATTGAAGGGCTCATaGCCCGTCTCCCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSLKGS*PVSQSH
Trigger: GTGTGACTGGGAGACGGGGCATGAGCCCTTCAATGA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAACGTGTTAACCGCATaGAAGAGCCTCTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGINVLTA*KSLSMP
Trigger: GGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTGCTGCCGGAGGATGTaGACGTCCATCGAGATTTAT +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPCCRRM*TSIEIY
Trigger: ATAAATCTCGATGGACGTGCACATCCTCCGGCAGCA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTGTTGTACTGAGGGCTaGTGCCGGAGGATGTGCACG +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSCCTEG*CRRMCT
Trigger: CGTGCACATCCTCCGGCAGCAGCCCTCAGTACAACA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATACACTTCCATCACGTaGGCGCTCCACTGCGACAAC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQYTSIT*ALHCDN
Trigger: GTTGTCGCAGTGGAGCGCGCACGTGATGGAAGTGTA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGGAACTGGATCCTCCTaGCCATGGTCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEGTGSS*PWSAPG
Trigger: TCCTGGAGCTGACCATGGGCAGGAGGATCCAGTTCC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCGTCGTACAGGAACTaGTTGTTGAACCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSSYRN*LLNLVS
Trigger: GCTCACCAGGTTCAACAAGCAGTTCCTGTACGACGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGGTAGCTGCCGTAAATaGTGGAGTAGGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRGSCRK*WSRPSS
Trigger: TGAACTTGGCCTACTCCAGCATTTACGGCAGCTACC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCACCGTCTTCAGCTCTaGGTACTCCACGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIHRLQL*VLHDVL
Trigger: AAGGACATCGTGGAGTACGCAGAGCTGAAGACGGTG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTGGAAGCAGCGCACATaGTCCACTGGCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSWKQRT*STGVPS
Trigger: GGAGGGCACGCCAGTGGAGCATGTGCGCTGCTTCCA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGCAGAGCCAGCAGCGTaGATTGCTGGTGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIAEPAA*IAGDFP
Trigger: TGGAAAGTCACCAGCAATGCACGCTGCTGGCTCTGC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCCCCCTCTTTCACATaGACTCGCGGCAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISPSFT*TRGKMF
Trigger: GAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCCCCCTCTCTTGCGATaGCAATTTGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSPPLLR*QFAEGS
Trigger: GGACCCCTCAGCAAATTGCCATCGCAAGAGAGGGGG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCAGAGGCCCGCGCCAGATaGGGTCATCCAGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPEARAR*GHPESS
Trigger: GGAGCTTTCTGGATGACCCCATCTGGCGCGGGCCTC...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGTTACATTTCACCTGTaGGATGGCCCGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQVTFHL*DGPGAA
Trigger: AGCTGCTCCCGGGCCATCCCACAGGTGAAATGTAAC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGAAATGAAGCGCATGTaGTCCTCGCGGATCTGGATC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKEMKRM*SSRIWI
Trigger: GATCCAGATCCGCGAGGACCACATGCGCTTCATTTC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTGGAGTACTTGTCGGTaGGGTGCACAAGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIWSTCR*GAQASR
Trigger: CCTGGAAGCTTGTGCACCCCACCGACAAGTACTCCA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCAAACTTCTCCTCGCTaGTGTAGTTGTAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKQTSPR*CSCSAW
Trigger: CCACGCGCTACAACTACACCAGCGAGGAGAAGTTTG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGATCTCAATGGGGAACTaGATCCTCCTGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKISMGN*ILLPMV
Trigger: GACCATGGGCAGGAGGATCCAGTTCCCCATTGAGAT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTTGGTCTCCAGGATGTaGTCCGTCAGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSLVSRM*SVRIQG
Trigger: GCCCTGGATCCTGACGGACCACATCCTGGAGACCAA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATTGGTCTCCAGGATGTaGTCCGTCAGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTLVSRM*SVRIQG
Trigger: GCCCTGGATCCTGACGGACCACATCCTGGAGACCAA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCATCGATGCCTCCTTaGTCTCCAGGATGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISSMPP*SPGCGP
Trigger: CGGACCACATCCTGGAGACCAAGGAGGCATCGATGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGCGGGAGGTGGATCGTaGCTCCCTGATTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIAGGGS*LPDSCI
Trigger: AATGCAAGAATCAGGGAGCCACGATCCACCTCCCGC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCGGCTCAGCAGCTTGTaGGTCATGCGGTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIRLSSL*VMRLIS
Trigger: GGAAATCAACCGCATGACCCACAAGCTGCTGAGCCG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACCTCCCGCAGGTTCTaGAAGCACACCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETSRRF*KHTVFS
Trigger: GCTGAAGACGGTGTGCTTCCAGAACCTGCGGGAGGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGAGGTGAGCGGTATATaGGATGGTGTCACGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIEVSGI*DGVTVP
Trigger: TGGGACCGTGACACCATCCCATATACCGCTCACCTC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGCTTCCTCCAGGTCATaGGCACAGGTAACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIASSRS*AQVTER
Trigger: CCTCTCTGTTACCTGTGCCCATGACCTGGAGGAAGC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCCTGCCAATGGTGCTaGTATCCCATGCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPCQWC*YPMQLT
Trigger: GGTGAGCTGCATGGGATACCAGCACCATTGGCAGGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCAATCTGCCTTCTGCTaGATCTGCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKQSAFC*ICSSLK
Trigger: CTTGAGACTGGAGCAGATTCAGCAGAAGGCAGATTG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610365.4
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCCAGGTGTACAGCATaGCAGCATATTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISRCTA*QHILGP
Trigger: AGGGCCAAGAATATGCTGTCATGCTGTACACCTGGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGGCCCTCTTGTACGCTaGGTGGTCGTTCTTCACACT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSGPLVR*VVVLHT
Trigger: AGTGTGAAGAACGACCACTCAGCGTACAAGAGGGCC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTGTGGGTCATGCGGTTaGTTTCCAACAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATICGSCG*FPTGHP
Trigger: TGGATGGCCTGTTGGAAATCAACCGCATGACCCACA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGATCCATGCAGATACTaGGGCTGTGCATTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQDPCRY*GCALGC
Trigger: GCAGCCTAATGCACAGCCTCAGTATCTGCATGGATC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTCAGCAGCTCCTCCATaGCCACGGCGATACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSSAAPP*PRRYPG
Trigger: ACCAGGGTATCGCCGTGGTCATGGAGGAGCTGCTGA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAAAAGGCATGCCATGTTaGGTTACGGAGTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEKGMPC*VTECSA
Trigger: CGCGCTGCACTCCGTAACTCAACATGGCATGCCTTT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCATCAGTGGGACAAGATaGAGCGGGGCGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIISGTR*SGAYFD
Trigger: ATCAAAGTACGCCCCGCTGCATCTTGTCCCACTGAT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTAGTGTCCCCACGGGAATaGAGTAGACAAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLVSPRE*SRQTAW
Trigger: CCATGCAGTTTGTCTACTGCATTCCCGTGGGGACAC...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGTGTCCCCACGGGAATaGAGTAGACAAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQVSPRE*SRQTAW
Trigger: CCATGCAGTTTGTCTACTGCATTCCCGTGGGGACAC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTAGCAAAACGCCGCTGCTaGCCAAGAAGTACGATGATC +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLAKRRC*PRSTMI
Trigger: GATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGC...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATGGAAAGGAGCCGCGTaGAGCAGGTCACACACTTCT +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTWKGAA*SRSHTS
Trigger: AGAAGTGTGTGACCTGCTGCACGCGGCTCCTTTCCA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGTCTTCCTGATGGCCTaGAGGACACTCTGGATGACG +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSVFLMA*RTLWMT
Trigger: CGTCATCCAGAGTGTCCTGCAGGCCATCAGGAAGAC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAAAGGGGTAGGTAGGTaGACGACTGCCTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQKGVGR*TTASET
Trigger: CGTTTCTGAGGCAGTCGTGCACCTACCTACCCCTTT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCATCACTTCGAGCTGCTaGTGCAGAGACTGTGTGATC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIITSSC*CRDCVI
Trigger: GATCACACAGTCTCTGCAGCAGCAGCTCGAAGTGAT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCGAAATCACTTCGAGCTaGTGCTGCAGAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECEITSS*CCRDCV
Trigger: CACACAGTCTCTGCAGCAGCAGCTCGAAGTGATTTC...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCAGATTCACAATATCTaGCAGGAGCTCTTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPQIHNI*QELFVA
Trigger: GGCTACGAAGAGCTCCTGGCAGATATTGTGAATCTG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGGTAGCTGCCGTAAATaGTGGAGTAGGCCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKGSCRK*WSRPSS
Trigger: TGAACTTGGCCTACTCCAGCATTTACGGCAGCTACC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACGAAGTTCCGGTAGCTaGCGTAAATGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQRSSGS*RKCWSR
Trigger: CCTACTCCAGCATTTACGGCAGCTACCGGAACTTCG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAGCGTCTTCACGTACTaGAGGATTGTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSVFTY*RIVPCS
Trigger: GCTGCAAGGCACAATCCTGCAGTACGTGAAGACGCT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACAGGTTAGAGTTCCTTaGCAAGCCAGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEQVRVP*QARQHR
Trigger: CCTGTGCTGCCTGGCTTGGCAAGGAACTCTAACCTG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGAAAGTAGGCGAGGCCTaGTTTTTATGGCAACTTGGC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRKVGEA*FLWQLG
Trigger: GCCAAGTTGCCATAAAAAGCAGGCCTCGCCTACTTT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCATCCTGCCTGCTGTTaGAGCCTGGCTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIHPACC*SLAGFI
Trigger: AATAAACCCAGCCAGGCTGCAACAGCAGGCAGGATG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTCGCCCCGCAAGGCTaGGTCATTGAAGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLAPQG*VIEGLM
Trigger: CATGAGCCCTTCAATGACCCAGCCTTGCGGGGCGAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTTCCTCCTCTCGGCATaGCACAGGCGCCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSFLLSA*HRRLTS
Trigger: GGAAGTGAGGCGCCTGTGCCATGCCGAGAGGAGGAA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCTCTTGTACGCTGAGTaGTCGTTCTTCACACTGCAC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKLLYAE*SFFTLH
Trigger: GTGCAGTGTGAAGAACGACCACTCAGCGTACAAGAG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAGATTCTGCGATTCCTaGATGGACTGTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIRFCDS*MDCGSA
Trigger: GGCAGATCCACAGTCCATCCAGGAATCGCAGAATCT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATGTAGTTGTAGCGCGTaGCACGCTCGTACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQCSCSA*HARTLQ
Trigger: CTGAAGAGTACGAGCGTGCCACGCGCTACAACTACA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCCTATGTCCAATATGGTaGGCCCCTCAAGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECLCPIW*APQGYF
Trigger: GAAGTAGCCTTGAGGGGCCCACCATATTGGACATAG...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAATCTCAATGGGGAACTaGATCCTCCTGCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQISMGN*ILLPMV
Trigger: GACCATGGGCAGGAGGATCCAGTTCCCCATTGAGAT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACTAGGGACTTATACATaGCTGCTGAGACGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTLGTYT*LLRRAG
Trigger: CCCAGCGCGTCTCAGCAGCCATGTATAAGTCCCTAG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCTCTTCATATCCAGATTaGAGCAGCCAACACGGCCGT +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECSSYPD*SSQHGR
Trigger: ACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACATGCAGCTCACCACTaGCTGCGTGGAAACTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEHAAHH*LRGNSL
Trigger: AAGGGAGTTTCCACGCAGCCAGTGGTGAGCTGCATG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSAQEVR*SYSQPS
Trigger: ACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEAQEVR*SYSQPS
Trigger: ACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATGGATCGTGGCTCCCTaGTTCTTGCATTCTGATCGT +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQWIVAP*FLHSDR
Trigger: ACGATCAGAATGCAAGAATCAGGGAGCCACGATCCA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTGTGGGTCATGCGGTTaGTTTCCAACAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSCGSCG*FPTGHP
Trigger: TGGATGGCCTGTTGGAAATCAACCGCATGACCCACA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTAGCCGGCAGATGACTTaGAAGTGTGGAGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSSRQMT*KCGGPT
Trigger: CGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGTTCATGTCACTTGAGTaGGTTTGGCAGTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRFMSLE*VWQCNR
Trigger: CCTGTTACACTGCCAAACTCACTCAAGTGACATGAA...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAGCGTGCATTGCTGGTaGCTTTCCAGAAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSVHCW*LSRRVA
Trigger: TGCCACTCTTCTGGAAAGTCACCAGCAATGCACGCT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACAGCAAAACGCCGCTaGTGCCCAAGAAGTACGATG +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETAKRR*CPRSTM
Trigger: CATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAACTTCGAGCTGCTGCTaGAGAGACTGTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQTSSCC*RDCVIL
Trigger: CAAGATCACACAGTCTCTGCAGCAGCAGCTCGAAGT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGAAATCACTTCGAGCTaGTGCTGCAGAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQEITSS*CCRDCV
Trigger: CACACAGTCTCTGCAGCAGCAGCTCGAAGTGATTTC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCAGATTCACAATATCTaGCAGGAGCTCTTCGTAGCC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKQIHNI*QELFVA
Trigger: GGCTACGAAGAGCTCCTGGCAGATATTGTGAATCTG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATACTTGTCGGTGGGGTaGACAAGCTTCCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQYLSVG*TSFQEY
Trigger: GTATTCCTGGAAGCTTGTGCACCCCACCGACAAGTA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGGAAAGGTCACAGCACTaGTGCAGCGTTTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQERSQH*CSVSLK
Trigger: TTTCAGTGAAACGCTGCAGCAGTGCTGTGACCTTTC...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCGTCGTACAGGAACTaGTTGTTGAACCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISSYRN*LLNLVS
Trigger: GCTCACCAGGTTCAACAAGCAGTTCCTGTACGACGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAAGAAGCAAACTTCCTaGCATAACCTTATAATAGGC +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPKKQTS*HNLIIG
Trigger: GCCTATTATAAGGTTATGGCAGGAAGTTTGCTTCTT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACACCGTCTTCAGCTCTaGGTACTCCACGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEHRLQL*VLHDVL
Trigger: AAGGACATCGTGGAGTACGCAGAGCTGAAGACGGTG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKTERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAAGTCGATGGAAAACTaGAAACATATGCAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TGNREALSSLFISRLEQPKSMEN*KHMQKR
Trigger: CCTTTTCTGCATATGTTTGCAGTTTTCCATCGACTT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCATCCTGCCTGCTGTTaGAGCCTGGCTGGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSHPACC*SLAGFI
Trigger: AATAAACCCAGCCAGGCTGCAACAGCAGGCAGGATG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCACCCCCTCTCTTGCGATaGCAATTTGCTGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPPPLLR*QFAEGS
Trigger: GGACCCCTCAGCAAATTGCCATCGCAAGAGAGGGGG...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGCCTGCAGGACACTCTaGATGACGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQACRTL*MTFFFF
Trigger: GAAGAAGAAGAACGTCATCCAGAGTGTCCTGCAGGC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTCGTTCATGCTAGAGTaGACGGTGGCTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQSFMLE*TVACSM
Trigger: CATTGAACAAGCCACCGTCCACTCTAGCATGAACGA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCGCAGAAACGCTCAATaGCATTTCTCTGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPRRNAQ*HFSGST
Trigger: TGTACTTCCAGAGAAATGCCATTGAGCGTTTCTGCG...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCTCTTGTACGCTGAGTaGTCGTTCTTCACACTGCAC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATILLYAE*SFFTLH
Trigger: GTGCAGTGTGAAGAACGACCACTCAGCGTACAAGAG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATGTAGTTGTAGCGCGTaGCACGCTCGTACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTCSCSA*HARTLQ
Trigger: CTGAAGAGTACGAGCGTGCCACGCGCTACAACTACA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCTATGTCCAATATGGTaGGCCCCTCAAGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATILCPIW*APQGYF
Trigger: GAAGTAGCCTTGAGGGGCCCACCATATTGGACATAG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTTTCTATGTCCAATATaGTGGGCCCCTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQFLCPI*WAPQGY
Trigger: GTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTTCTATGTCCAATATaGTGGGCCCCTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKFLCPI*WAPQGY
Trigger: GTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAGCTGCCGTAAATGCTaGAGTAGGCCAAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKSCRKC*SRPSSK
Trigger: CTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGATGACTTGAAAGTGTaGAGGTCCCACGAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQDDLKV*RSHEVP
Trigger: CGGAACTTCGTGGGACCTCCACACTTTCAAGTCATC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTTCATCATTGAGAATCTaGAACTTGCGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPSSLRI*NLRILS
Trigger: GGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGA...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTCCTCCCACATTGCTaGCTTCCTCCAGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLLPHC*LPPGHG
Trigger: CCCATGACCTGGAGGAAGCCAGCAATGTGGGAGGAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCTTCCAACTTTATTATTaGCCTTCTAAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGFQLYY*PSKELF
Trigger: AAACAGCTCCTTAGAAGGCCAATAATAAAGTTGGAA...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGCTGCAGAGACTGTGTaGTCTTGTTATGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQAAETV*SCYDWP
Trigger: TGGCCAATCATAACAAGATCACACAGTCTCTGCAGC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACCACCTGGAGTTGCTTaGAGTACTTGTCGATTTTGG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQPPGVA*STCRFW
Trigger: CCAAAATCGACAAGTACTTCAAGCAACTCCAGGTGG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAGTGGGCGCTGGTCTTaGTATATCTTGCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSGRWS*YILPVL
Trigger: TAGAACTGGCAAGATATATCAAGACCAGCGCCCACT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTTATACATGGCTGCTaGGACGCGCTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLIHGC*DALGDQ
Trigger: CTGATCACCCAGCGCGTCTCAGCAGCCATGTATAAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAAGCTGGCCTGGTATGTaGGTTCAGGTTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSESWPGM*VQVRVP
Trigger: AGGAACTCTAACCTGAACTCACATACCAGGCCAGCT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGAATCCGGCTTCCTCTaGGCATTCGATGGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSESGFL*AFDGLS
Trigger: GCTAAGGCCATCGAATGCTCAGAGGAAGCCGGATTC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCAACACACTCGTCCACATaGATGACCCCATTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPTHSST*MTPLLG
Trigger: GCCCAGCAATGGGGTCATGCATGTGGACGAGTGTGT...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR GCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCCTTGCCAGTTCTATTTaGATGTCCCCAAATAGCGGA +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECLASSI*MSPNSG
Trigger: TCCGCTATTTGGGGACATGCAAATAGAACTGGCAAG...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTGCTGCCGGAGGATGTaGACGTCCATCGAGATTTAT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSCCRRM*TSIEIY
Trigger: ATAAATCTCGATGGACGTGCACATCCTCCGGCAGCA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTACTTGTCGGTGGGGTaGACAAGCTTCCAGGAATAC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSYLSVG*TSFQEY
Trigger: GTATTCCTGGAAGCTTGTGCACCCCACCGACAAGTA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAGGTCACAGCACTGCTaGAGCGTTTCACTGAAATTT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKRSQHC*SVSLKF
Trigger: AAATTTCAGTGAAACGCTGCAGCAGTGCTGTGACCT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGAAAGGTCACAGCACTaGTGCAGCGTTTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIERSQH*CSVSLK
Trigger: TTTCAGTGAAACGCTGCAGCAGTGCTGTGACCTTTC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATCGTCGTACAGGAACTaGTTGTTGAACCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTSSYRN*LLNLVS
Trigger: GCTCACCAGGTTCAACAAGCAGTTCCTGTACGACGA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCAGATACTGAGGCTGTaGATTAGGCTGCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKQILRL*IRLLIS
Trigger: AGAGATAAGCAGCCTAATGCACAGCCTCAGTATCTG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTTGTACCAAGTACTTTaGTTAAGAGCTCCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPLYQVL*LRAPLG
Trigger: GCCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACGAAAAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTTCCCCCTCTTTCACATaGACTCGCGGCAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: NEKKVSVGGTLRTRMKNISPSFT*TRGKMF
Trigger: GAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGA...AATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp AACGAAAAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTCAGTCTTTCAATCAGTaGGACAAGATGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: NEKKVSVGGTLRTRMKNIQSFNQ*DKMQRG
Trigger: GCCCCGCTGCATCTTGTCCCACTGATTGAAAGACTG...AATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCAGTAGACAAACTGCATaGCACTCCACAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECSRQTA*HSTVCE
Trigger: TTCACAGACTGTGGAGTGCCATGCAGTTTGTCTACT...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAGCCTGCAGGACACTCTaGATGACGTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTACRTL*MTFFFF
Trigger: GAAGAAGAAGAACGTCATCCAGAGTGTCCTGCAGGC...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGTTAGTGTTGAAATTTaGCTGGTAGAGCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKVSVEI*LVEQRG
Trigger: TCCTCGCTGCTCTACCAGCCAAATTTCAACACTAAC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGTTACATTTCACCTGTaGGATGGCCCGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSVTFHL*DGPGAA
Trigger: AGCTGCTCCCGGGCCATCCCACAGGTGAAATGTAAC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCAATAGCGGAACCACCTaGAGTTGCTTGAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECNSGTT*SCLKYL
Trigger: CAAGTACTTCAAGCAACTCCAGGTGGTTCCGCTATT...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTAGGGACTTATACATaGCTGCTGAGACGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLGTYT*LLRRAG
Trigger: CCCAGCGCGTCTCAGCAGCCATGTATAAGTCCCTAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCGGCTCAGCAGCTTGTaGGTCATGCGGTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSRLSSL*VMRLIS
Trigger: GGAAATCAACCGCATGACCCACAAGCTGCTGAGCCG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCTGCCGTAAATGCTaGAGTAGGCCAAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISCRKC*SRPSSK
Trigger: CTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGAGGCCTGCTTTTTATaGCAACTTGGCATCCATAGA +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIEACFL*QLGIHR
Trigger: TCTATGGATGCCAAGTTGCCATAAAAAGCAGGCCTC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGAGGCCTGCTTTTTATaGCAACTTGGCATCCATAGA +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKEACFL*QLGIHR
Trigger: TCTATGGATGCCAAGTTGCCATAAAAAGCAGGCCTC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCTGCATCATATGCTTCTaGACAGTTTCCAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVVSKISTATTSKSAAECCIICF*TVSKGL
Trigger: GAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGGCAGTGTAACAGGATaGTTCGTACACTTACTACTT +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRGSVTG*FVHLLL
Trigger: AAGTAGTAAGTGTACGAACCATCCTGTTACACTGCC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCTGCTGTTGCAGCCTaGCTGGGTTTATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPAVAA*LGLFFS
Trigger: ACTGAAGAATAAACCCAGCCAGGCTGCAACAGCAGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCATTTTACGTAAAAACTaGGCGGCCCTCTTGTACGCT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIILRKN*AALLYA
Trigger: AGCGTACAAGAGGGCCGCTCAGTTTTTACGTAAAAT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAGCTGCAGAGACTGTGTaGTCTTGTTATGATTGGCCA +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTAAETV*SCYDWP
Trigger: TGGCCAATCATAACAAGATCACACAGTCTCTGCAGC...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCACTTATAGATGTTACTaGCACTCCCATCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGITYRCY*HSHPSG
Trigger: ACCTGATGGATGGGAGTGTCAGTAACATCTATAAGT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGCTGCAGCGTTTCACTaGAATTTATCAAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKAAAFH*NLSSEC
Trigger: ACACTCACTTGATAAATTTCAGTGAAACGCTGCAGC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTACGATTGAGGTCTATTaGTCTGCCGAGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSTIEVY*SAEELH
Trigger: GTGCAGCTCCTCGGCAGATCAATAGACCTCAATCGT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAATTTTGTAGGAACGTaGTGGCAACAATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATINFVGT*WQQSAA
Trigger: GGCTGCTGATTGTTGCCATCACGTTCCTACAAAATT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGTAACAGAGAGGCACTaGGTAGCCTCTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEVTERH*VASSYP
Trigger: TGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTAC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAACTCCATTCAGCTTTaGACCTATCCACTCATAACC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGINSIQL*TYPLIT
Trigger: GGTTATGAGTGGATAGGTTCAAAGCTGAATGGAGTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAACGATTTCTCAGGTTaGGATGATCACCGTGAATCC +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQNDFSG*DDHRES
Trigger: GGATTCACGGTGATCATCTCAACCTGAGAAATCGTT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AACGAAAAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTATCAGTGGGACAAGATaGAGCGGGGCGTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: NEKKVSVGGTLRTRMKNIISGTR*SGAYFD
Trigger: ATCAAAGTACGCCCCGCTGCATCTTGTCCCACTGAT...AATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTTCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGCAAAACGCCGCTGCTaGCCAAGAAGTACGATGATC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSAKRRC*PRSTMI
Trigger: GATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCAACAGCAAAACGCCGCTaGTGCCCAAGAAGTACGATG +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPTAKRR*CPRSTM
Trigger: CATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGT...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTACAGCAAAACGCCGCTaGTGCCCAAGAAGTACGATG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSTAKRR*CPRSTM
Trigger: CATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACGGAGAGAAAGGCATaGCATGTTGAGTTACGGAGT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETERKA*HVELRS
Trigger: ACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTACACCTCATTTGCCTaGGGAACCCTAAATATAAAG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPYTSFA*GTLNIK
Trigger: CTTTATATTTAGGGTTCCGCAGGCAAATGAGGTGTA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGTTTTACACCTCATTTaGCTGCGGAACCCTAAATAT +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRVLHLI*LRNPKY
Trigger: ATATTTAGGGTTCCGCAGGCAAATGAGGTGTAAAAC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAAAGTAGGCGAGGCCTaGTTTTTATGGCAACTTGGC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTKVGEA*FLWQLG
Trigger: GCCAAGTTGCCATAAAAAGCAGGCCTCGCCTACTTT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAGTGCCGTGCATCATATaGTTCTGGACAGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQVPCII*FWTVSK
Trigger: TTTGGAAACTGTCCAGAAGCATATGATGCACGGCAC...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTACTTTTCTGTGCCGTaGATCATATGCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQYFSVP*IICFWT
Trigger: TGTCCAGAAGCATATGATGCACGGCACAGAAAAGTA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTACTTTTCTGTGCCGTaGATCATATGCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKYFSVP*IICFWT
Trigger: TGTCCAGAAGCATATGATGCACGGCACAGAAAAGTA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTGTACCAAGTACTTTaGTTAAGAGCTCCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKLYQVL*LRAPLG
Trigger: GCCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGTAGACAAACTGCATaGCACTCCACAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISRQTA*HSTVCE
Trigger: TTCACAGACTGTGGAGTGCCATGCAGTTTGTCTACT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTCGTTCATGCTAGAGTaGACGGTGGCTTGTTCAATG +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSFMLE*TVACSM
Trigger: CATTGAACAAGCCACCGTCCACTCTAGCATGAACGA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAATAGCGGAACCACCTaGAGTTGCTTGAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: HPIEKQFCRNVMATISSQNSGTT*SCLKYL
Trigger: CAAGTACTTCAAGCAACTCCAGGTGGTTCCGCTATT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
3UTR CAA 72 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATaGTTTTTCATTCTGACAGATCATGTGAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDR*FFILTDHVNQL
Trigger: GAGCTGGTTCACATGATCTGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTCCAGGTGTACAGCATaGCAGCATATTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSSRCTA*QHILGP
Trigger: AGGGCCAAGAATATGCTGTCATGCTGTACACCTGGA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCACTTATAGATGTTACTaGCACTCCCATCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATITYRCY*HSHPSG
Trigger: ACCTGATGGATGGGAGTGTCAGTAACATCTATAAGT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAATTTTGTAGGAACGTaGTGGCAACAATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSNFVGT*WQQSAA
Trigger: GGCTGCTGATTGTTGCCATCACGTTCCTACAAAATT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCCCAGCAGCATTTTATaGCACAGCTGCCAGAACATC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSPSSIL*HSCQNI
Trigger: GATGTTCTGGCAGCTGTGTCATAAAATGCTGCTGGG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTTCTTATGGAATaGATGAATGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIKFLME*MNEPSS
Trigger: GCTGCTGGGTTCATTCATTCATTCCATAAGAAACTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAAGGGATGGGAACAATaGCTTAGAACTAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKKGWEQ*LRTKIA
Trigger: AGCAATCTTAGTTCTAAGTCATTGTTCCCATCCCTT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAACGATTTCTCAGGTTaGGATGATCACCGTGAATCC +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSNDFSG*DDHRES
Trigger: GGATTCACGGTGATCATCTCAACCTGAGAAATCGTT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTGGAAAACTAAGTTACTaGATGAAGGAACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPGKLSY*MKEPLS
Trigger: AGAAAGAGGTTCCTTCATTCAGTAACTTAGTTTTCC...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGTTGTTCAATGTATCTTaGGATGCCAGTAACAAATGC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRLFNVS*DASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAA...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR GCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAAACATGGACAGATTCTaGGATTCCTGGATGGACTGT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSENMDRF*DSWMDC
Trigger: ACAGTCCATCCAGGAATCGCAGAATCTGTCCATGTT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTATCACTTCGAGCTGCTaGTGCAGAGACTGTGTGATC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSITSSC*CRDCVI
Trigger: GATCACACAGTCTCTGCAGCAGCAGCTCGAAGTGAT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTGGCTCCCTGATTCTTaGATTCTGATCGTAACCGTT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSWLPDS*ILIVTV
Trigger: AACGGTTACGATCAGAATGCAAGAATCAGGGAGCCA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGAAGTCGATGGAAAACTaGAAACATATGCAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRKSMEN*KHMQKR
Trigger: CCTTTTCTGCATATGTTTGCAGTTTTCCATCGACTT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCTCCAAAAGCCGAATaGACTAATGACAGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSPKAE*TNDSFK
Trigger: CTTAAAACTGTCATTAGTGCATTCGGCTTTTGGAGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTACAAAAGGTCCATAGATaGTGCGAGATTTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLQKVHR*CEIFIH
Trigger: GTGGATGAAAATCTCGCACCATCTATGGACCTTTTG...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCGCAGAAACGCTCAATaGCATTTCTCTGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSRRNAQ*HFSGST
Trigger: TGTACTTCCAGAGAAATGCCATTGAGCGTTTCTGCG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCCAAGTTCAAAGCCTTaGATCCATGCAGATACTGAG +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSPSSKP*IHADTE
Trigger: CTCAGTATCTGCATGGATCCAAGGCTTTGAACTTGG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCATCATTGAGAATCTaGAACTTGCGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISSLRI*NLRILS
Trigger: GGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTACCTTACGTACTAGGATaGAAAACATTGCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLPYVLG*KTLPET
Trigger: TGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGG...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCCACCTGGAGTTGCTTaGAGTACTTGTCGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSPPGVA*STCRFW
Trigger: CCAAAATCGACAAGTACTTCAAGCAACTCCAGGTGG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTAGTGGGCGCTGGTCTTaGTATATCTTGCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSSGRWS*YILPVL
Trigger: TAGAACTGGCAAGATATATCAAGACCAGCGCCCACT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGCTGCAGCGTTTCACTaGAATTTATCAAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEAAAFH*NLSSEC
Trigger: ACACTCACTTGATAAATTTCAGTGAAACGCTGCAGC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGCTGCAGCGTTTCACTaGAATTTATCAAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSAAAFH*NLSSEC
Trigger: ACACTCACTTGATAAATTTCAGTGAAACGCTGCAGC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAAACTCCATTCAGCTTTaGACCTATCCACTCATAACC +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSENSIQL*TYPLIT
Trigger: GGTTATGAGTGGATAGGTTCAAAGCTGAATGGAGTT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTTGTTCAATGTATCTTaGGATGCCAGTAACAAATGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGILFNVS*DASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAAGCAAACTTCCTaGCATAACCTTATAATAGGC +
Preference number: 4 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIKKQTS*HNLIIG
Trigger: GCCTATTATAAGGTTATGGCAGGAAGTTTGCTTCTT...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp AACGAAAAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTAGTAGACAAACTGCATaGCACTCCACAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: NEKKVSVGGTLRTRMKNISRQTA*HSTVCE
Trigger: TTCACAGACTGTGGAGTGCCATGCAGTTTGTCTACT...AATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTTCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGTCAATGGCATTTCTCTaGAAGTACATGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRSMAFL*KYMKFI
Trigger: GATGAATTTCATGTACTTCCAGAGAAATGCCATTGA...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTTTCTATGTCCAATATaGTGGGCCCCTCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSFLCPI*WAPQGY
Trigger: GTAGCCTTGAGGGGCCCACCATATTGGACATAGAAA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCATCCAGCTCAACTATaGAGGTCAAATCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIHPAQL*RSNLHF
Trigger: AAAGTGAAGATTTGACCTCCATAGTTGAGCTGGATG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCATCATTGAGAATCTaGAACTTGCGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISSLRI*NLRILS
Trigger: GGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
3UTR CAA 72 bp TTCTTCAGTTACCCTAATCCCATGATGCCTGGAACCTaGATTACCGTTTTACATCAGCTCTTGTACTTTTCA +
Preference number: 4 (lower is better)
Translates to: FFSYPNPMMPGT*ITVLHQLLYFS
Trigger: TGAAAAGTACAAGAGCTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAAAGTTTCTTATGGAATaGATGAATGAACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTKFLME*MNEPSS
Trigger: GCTGCTGGGTTCATTCATTCATTCCATAAGAAACTT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTAACATGGACAGATTCTaGGATTCCTGGATGGACTGT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSNMDRF*DSWMDC
Trigger: ACAGTCCATCCAGGAATCGCAGAATCTGTCCATGTT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTTGCCAGTTCTATTTaGATGTCCCCAAATAGCGGA +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLASSI*MSPNSG
Trigger: TCCGCTATTTGGGGACATGCAAATAGAACTGGCAAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTGGCTCCCTGATTCTTaGATTCTGATCGTAACCGTT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSWLPDS*ILIVTV
Trigger: AACGGTTACGATCAGAATGCAAGAATCAGGGAGCCA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCAGATACTGAGGCTGTaGATTAGGCTGCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSQILRL*IRLLIS
Trigger: AGAGATAAGCAGCCTAATGCACAGCCTCAGTATCTG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTACACCTCATTTGCCTaGGGAACCCTAAATATAAAG +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSYTSFA*GTLNIK
Trigger: CTTTATATTTAGGGTTCCGCAGGCAAATGAGGTGTA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTAGCCAGACTGCTTTACTaGCCAATTATATTTAGATTC +
Preference number: 4 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLARLLY*PIIFRF
Trigger: GAATCTAAATATAATTGGCCAGTAAAGCAGTCTGGC...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CCA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACATCCAGCTCAACTATaGAGGTCAAATCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEHPAQL*RSNLHF
Trigger: AAAGTGAAGATTTGACCTCCATAGTTGAGCTGGATG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SLKISLNSLRRERHAMLSFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAGGCTACAATATAAAGTaGGTTCAGTTAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTGYNIK*VQLIML
Trigger: CAGCATGATTAACTGAACTCACTTTATATTGTAGCC...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCAATGGCATTTCTCTaGAAGTACATGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISMAFL*KYMKFI
Trigger: GATGAATTTCATGTACTTCCAGAGAAATGCCATTGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGCAGTGTAACAGGATaGTTCGTACACTTACTACTT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSGSVTG*FVHLLL
Trigger: AAGTAGTAAGTGTACGAACCATCCTGTTACACTGCC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CCA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTTCCAACTTTATTATTaGCCTTCTAAGGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIFQLYY*PSKELF
Trigger: AAACAGCTCCTTAGAAGGCCAATAATAAAGTTGGAA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
3UTR CAA 72 bp GTCTCTTTGTACCAAGTACTTTGCTTAAGAGCTCCTTaGGGCCACTACATATTTTGGTTTCTAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: VSLYQVLCLRAP*GHYIFWFLENV
Trigger: AACATTTTCTAGAAACCAAAATATGTAGTGGCCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAAAGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCAAAGGTCCATAGATGGTaGGAGATTTTCATCCACATA +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPKVHRW*EIFIHI
Trigger: TATGTGGATGAAAATCTCGCACCATCTATGGACCTT...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTTCTTATGGAATGAATaGATGAACCCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSFLWNE*MNPAAF
Trigger: AAATGCTGCTGGGTTCATTCATTCATTCCATAAGAA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR TCA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAAACTAAGTTACTaGATGAAGGAACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSGKLSY*MKEPLS
Trigger: AGAAAGAGGTTCCTTCATTCAGTAACTTAGTTTTCC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR GCA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCATTTTCTCTGCCAGACTaGTTTACTGGCCAATTATAT +
Preference number: 4 (lower is better)
Translates to: CQKQELITQRKYAFAKGPFSLPD*FTGQLY
Trigger: ATATAATTGGCCAGTAAAGCAGTCTGGCAGAGAAAA...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS CCA 90 bp CCTGGGCCGCCATCCTGGGCTGCGTCCGCGGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTCCTTGGCCGAGTGAGTCACTCGGGC +
Preference number: 5 (lower is better)
Translates to: PGPPSWAASAAAWGS*AGPGSFLGRVSHSG
Trigger: GCCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGCCGCGGACGCAGCCCAGGATGGCGGCCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS CCA 90 bp GTCCGCGGCGGCTTGGGGGTCCTGGGCGGGCCCTGGGAGTTTCCTTaGCCGAGTGAGTCACTCGGGCTGGCCGGGAATGCGCCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: VRGGLGVLGGPWEFP*PSESLGLAGNAPGN
Trigger: GTTTCCTGGCGCATTCCCGGCCAGCCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGCCGCGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611832.4
ENST00000630158.2
CDS CCA 90 bp CCCCTGTTCTGCGTCCGCGGCGGCTTGGGGGTCCTGGGCGGGCCCTaGGAGTTTCCTTGGCCGAGTGAGTCACTCGGGCTGGCCGGGAAT +
Preference number: 5 (lower is better)
Translates to: PLFCVRGGLGVLGGP*EFPWPSESLGLAGN
Trigger: ATTCCCGGCCAGCCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGCCGCGGACGCAGAACAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611832.4
ENST00000630158.2
CDS CCA 90 bp TCACGTGCGCTGCTCTGGAGCTCGCCCAGGCTGCACTGTCCGATGTaGCAGCCGGGGCCGGAGCACAGCTGCTCCCACCTGAGGCGCACT +
Preference number: 5 (lower is better)
Translates to: SRALLWSSPRLHCPM*QPGPEHSCSHLRRT
Trigger: AGTGCGCCTCAGGTGGGAGCAGCTGTGCTCCGGCCCCGGCTGCCACATCGGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 90 bp GGCACGTGTGGGTGGCAGGGCAGGTGCACTTGTTCCCACAGGCCTTaGAAGCCCTCACGTGCGCTGCTCTGGAGCTCGCCCAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GTCGWQGRCTCSHRP*KPSRALLWSSPRLH
Trigger: GTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCACCTGCCCTGCCACCCACACGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 90 bp ACACATAAGGACCCCTGTTCTGCGTCCGCGGCGGCTTGGGGGTCCTaGGCGGGCCCTGGGAGTTTCCTTGGCCGAGTGAGTCACTCGGGC +
Preference number: 5 (lower is better)
Translates to: THKDPCSASAAAWGS*AGPGSFLGRVSHSG
Trigger: GCCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGACCCCCAAGCCGCCGCGGACGCAGAACAGGGGTCCTTATGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611832.4
ENST00000630158.2
CDS CCA 90 bp TGCACTTGTTCCCACAGGCCTTGCAAGCCCTCACGTGCGCTGCTCTaGAGCTCGCCCAGGCTGCACTGTCCGATGTGGCAGCCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: CTCSHRPCKPSRALL*SSPRLHCPMWQPGP
Trigger: CGGCCCCGGCTGCCACATCGGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 90 bp GCAGGTGCACTTGTTCCCACAGGCCTTGCAAGCCCTCACGTGCGCTaGTCTGGAGCTCGCCCAGGCTGCACTGTCCGATGTGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AGALVPTGLASPHVR*SGARPGCTVRCGSR
Trigger: CCGGCTGCCACATCGGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 90 bp CCACGTTGGACAGCGCGTCCTCCAGAGTCACCTGGGCCGCCATCCTaGGCTGGAACAACACATAAGGACCCCTGTTCTGCGTCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: PRWTARPPESPGPPS*AGTTHKDPCSASAA
Trigger: CGCCGCGGACGCAGAACAGGGGTCCTTATGTGTTGTTCCAGCCCAGGATGGCGGCCCAGGTGACTCTGGAGGACGCGCTGTCCAACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611832.4
ENST00000619037.1
ENST00000627816.1
ENST00000630158.2
CDS CCA 90 bp GATTTCCAACAGGCCATCCAGCTCCTGTGGCACCAAAGACAGGGGTaGGTGACAGAGCTGGTCCAGGCAGGAAGGAGGCGCCGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: DFQQAIQLLWHQRQG*VTELVQAGRRRRVA
Trigger: GGCCACTCGGCGCCTCCTTCCTGCCTGGACCAGCTCTGTCACCCACCCCTGTCTTTGGTGCCACAGGAGCTGGATGGCCTGTTGGAAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 90 bp GACTCTAAGGATGAATACGCAGGGCCCTGCTCTGAAGTGCAGAGATaGTCACAGGGACACGCACTGTGCCCGCCAGCGCCCAGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: DSKDEYAGPCSEVQR*SQGHALCPPAPSVC
Trigger: GCAGACACTGGGCGCTGGCGGGCACAGTGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATCCTTAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp TTTCTCTGCCTGAGCAGGCAGCGAGGACCTCATTTAACCCGGGCCTCACCAGCCTCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: FLCLSRQRGPHLTRASPASMPRD*SCLSSS
Trigger: CGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGA...GGCTGGTGAGGCCCGGGTTAAATGAGGTCCTCGCTGCCTGCTCAGGCAGAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CAA 90 bp GCCCTCCTCCAGCATCTCGTTCTGGTGTGTGTGGGTGCAGATCTGGAGAGGGAATCCAGGAGGTCCACGTaGGACAGCGCGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALLQHLVLVCVGADLERESRRST*DSASSR
Trigger: TCTGGAGGACGCGCTGTCCAACGTGGACCTCCTGGA...TTCCCTCTCCAGATCTGCACCCACACACACCAGAACGAGATGCTGGAGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619037.1
ENST00000627816.1
CDS-3UTR CAA 90 bp ACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTGCCTGAGCAGCTCGGCGCACCAGGTAGAGTaGGGTGGGAAACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TACKSLSMPRDLSCLSSSAHQVE*GGKQRS
Trigger: GCTCCTCTGTTTCCCACCCAACTCTACCTGGTGCGC...CGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS GCA 90 bp GCCTGTTTGACTCTAAGGATGAATACGCAGGGCCCTGCTCTGAAGTaGAGAGATGCTCACAGGGACACGCACTGTGCCCGCCAGCGCCCA +
Preference number: 5 (lower is better)
Translates to: ACLTLRMNTQGPALK*RDAHRDTHCARQRP
Trigger: TGGGCGCTGGCGGGCACAGTGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATCCTTAGAGTCAAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGTCCAGGAGGTCCACGTaGGACAGCGCGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLSRRST*DSASSR
Trigger: TCTGGAGGACGCGCTGTCCAACGTGGACCTCCTGGA...CAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS GCA 90 bp AGTGGGCGCTGTCATTGTACAGGTCCAGGGAGTAGAGCACGTACCTaGAGAGGACAGCAGCAGTGTGACCAGCAGCCTCTGCCACTCACT +
Preference number: 5 (lower is better)
Translates to: SGRCHCTGPGSRART*RGQQQCDQQPLPLT
Trigger: AGTGAGTGGCAGAGGCTGCTGGTCACACTGCTGCTGTCCTCTGCAGGTACGTGCTCTACTCCCTGGACCTGTACAATGACAGCGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621105.1
ENST00000628956.1
CDS GCA 90 bp CAGGCCGAGGGCCGTCCCCCTGACCCTCCTGCAGAGCCAGCAGCGTaGATTGCTGGTGACTTTCCAGAAGAGTGGCAGAAGAGATTAAAA +
Preference number: 5 (lower is better)
Translates to: QAEGRPPDPPAEPAA*IAGDFPEEWQKRLK
Trigger: TTTTAATCTCTTCTGCCACTCTTCTGGAAAGTCACCAGCAATGCACGCTGCTGGCTCTGCAGGAGGGTCAGGGGGACGGCCCTCGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS-3UTR CAA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGTGGGTGATCAGACGATaGAGGTCTATTGATCTGCCG +
Preference number: 5 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLWVIRR*RSIDLP
Trigger: CGGCAGATCAATAGACCTCAATCGTCTGATCACCCA...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS GCA 90 bp CTGAGTCCCAGCCTGTTTGACTCTAAGGATGAATACGCAGGGCCCTaGTCTGAAGTGCAGAGATGCTCACAGGGACACGCACTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: LSPSLFDSKDEYAGP*SEVQRCSQGHALCP
Trigger: CGGGCACAGTGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATCCTTAGAGTCAAACAGGCTGGGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp AAACGTGTTAACCGCATGCAAGAGCCTCTCCATGCCCAGAGACTTGAGCTGCCTCGCAAGGCTGGGTCATaGAAGGGCTCATGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: KRVNRMQEPLHAQRLELPRKAGS*KGSCPV
Trigger: GACGGGGCATGAGCCCTTCAATGACCCAGCCTTGCG...AGGCAGCTCAAGTCTCTGGGCATGGAGAGGCTCTTGCATGCGGTTAACACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS TCA 90 bp CAGCCGGGGCCGGAGCACAGCTGCTCCCACCTGAGGCGCACTACATaGGACACCAGATTTCAAAGACTGAGTAGGACAAAACAGACTAGC +
Preference number: 5 (lower is better)
Translates to: QPGPEHSCSHLRRTT*DTRFQRLSRTKQTS
Trigger: GCTAGTCTGTTTTGTCCTACTCAGTCTTTGAAATCTGGTGTCTCATGTAGTGCGCCTCAGGTGGGAGCAGCTGTGCTCCGGCCCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 90 bp GGCGATACCCTGGTAGCCGAGAAGCCGGCAGATGACTTGAAAGTGTaGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: GDTLVAEKPADDLKV*RSHEVPVAAVNAGV
Trigger: TACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCGGCTACCAGGGTATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCAGCAGAGGCGCTCCTTaGTCAGCAGGTCCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGSRGAP*SAGPPL
Trigger: GAGAGGGGGACCTGCTGACAAAGGAGCGCCTCTGCT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS GCA 90 bp GGCTCTGGTGAAGGTCTGAGGACAATCGGATTTTCCTTCCCTGCCTaGCCTGCTCAGACAGCCCAAGGACTTCTTCCTCACCTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: GSGEGLRTIGFSFPA*PAQTAQGLLPHLES
Trigger: ACTTTCCAGGTGAGGAAGAAGTCCTTGGGCTGTCTGAGCAGGGCAGGCAGGGAAGGAAAATCCGATTGTCCTCAGACCTTCACCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGCCAAATCCCATGACTTaGAGAAGCATGTGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLPNPMT*RSMCFS
Trigger: TGAGAAACACATGCTTCTCAAAGTCATGGGATTTGG...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp GGACAGCTGAAGGCTGGACTCGGTGCTCCCGGTCCCTTTGTGCAGCACCCACTGATGATGCCTGGAACCTaGATTACCGTTTTACATCAG +
Preference number: 5 (lower is better)
Translates to: GQLKAGLGAPGPFVQHPLMMPGT*ITVLHQ
Trigger: CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCAT...CAGTGGGTGCTGCACAAAGGGACCGGGAGCACCGAGTCCAGCCTTCAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS CCA 90 bp CCTGCAGAGCCAGCAGCGTGCATTGCTGGTGACTTTCCAGAAGAGTaGCAGAAGAGATTAAAAGCCTCCGGCAGAGATGAGGGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: PAEPAACIAGDFPEE*QKRLKASGRDEGED
Trigger: GTCTTCTCCCTCATCTCTGCCGGAGGCTTTTAATCTCTTCTGCCACTCTTCTGGAAAGTCACCAGCAATGCACGCTGCTGGCTCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCGCAGGTCCCCCTCTCTaGCGATGGCAATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGAGPPL*RWQFAE
Trigger: CTCAGCAAATTGCCATCGCAAGAGAGGGGGACCTGC...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS TCA 90 bp AGAAATCCAGCACAGCAAAACGCCGCTGCTGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGTGTAGCCCATCACCAAAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: RNPAQQNAAAAQEVR*SYSQPSVAHHQSTA
Trigger: AGCAGTGCTTTGGTGATGGGCTACACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGTGCTGGATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000561263.2
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS TCA 90 bp CAAACCCTCGATTCACAGTTCCTTTCCTTGGCTCTGGTGAAGGTCTaGGGACAATCGGATTTTCCTTCCCTGCCTGCCCTGCTCAGACAG +
Preference number: 5 (lower is better)
Translates to: QTLDSQFLSLALVKV*GQSDFPSLPALLRQ
Trigger: CTGTCTGAGCAGGGCAGGCAGGGAAGGAAAATCCGATTGTCCTCAGACCTTCACCAGAGCCAAGGAAAGGAACTGTGAATCGAGGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 90 bp TCAAGTCTCTCCCCCTCTTTCACATGGACTCGCGGCAAGATGTTCTaGAAAGGAGCCGCGTGCAGCAGGTCACACACTTCTTCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: SSLSPSFTWTRGKMF*KGAACSRSHTSSKD
Trigger: GTCTTTAGAAGAAGTGTGTGACCTGCTGCACGCGGCTCCTTTCCAGAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGAGAGACTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000557890.1
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCACCCTTGAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLRVDGG*FNVSCD
Trigger: ATCGCAAGATACATTGAACAAGCCACCGTCCACTCT...CAAGGGTGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCTACCGGCTCAGCAGCTaGTGGGTCATGCGGTTGATT +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGYRLSS*WVMRLI
Trigger: AATCAACCGCATGACCCACAAGCTGCTGAGCCGGTA...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCACATCCTGCCTGCTGTaGCAGCCTGGCTGGGTTTAT +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGTSCLL*QPGWVY
Trigger: ATAAACCCAGCCAGGCTGCAACAGCAGGCAGGATGT...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGACATCCTGCCTGCTGTaGCAGCCTGGCTGGGTTTAT +
Preference number: 5 (lower is better)
Translates to: NREALSSLFISRLEQPTRTSCLL*QPGWVY
Trigger: ATAAACCCAGCCAGGCTGCAACAGCAGGCAGGATGT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATGTAAAGCACCAAAGGTTAAAAGGGGTAGGTAGGTGCACGACTGCCTCAGAAGCGCACCAGGTAGAGTaGGGTGGGAAACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: HVKHQRLKGVGRCTTASEAHQVE*GGKQRS
Trigger: GCTCCTCTGTTTCCCACCCAACTCTACCTGGTGCGC...TTCTGAGGCAGTCGTGCACCTACCTACCCCTTTTAACCTTTGGTGCTTTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS CCA 90 bp GAAAGTGTGGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAATGCTaGAGTAGGCCAAGTTCAAAGCCTTGGATCCATGCAGATACTGAG +
Preference number: 5 (lower is better)
Translates to: ESVEVPRSSGSCRKC*SRPSSKPWIHADTE
Trigger: CTCAGTATCTGCATGGATCCAAGGCTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TTCTATGTCCAATATGGTGGGCCCCTCAAGGCTACTTCTCAAGGTTTTCTTGGATCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: FYVQYGGPLKATSQGFLGSMPRD*SCLSSS
Trigger: CGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGA...TCCAAGAAAACCTTGAGAAGTAGCCTTGAGGGGCCCACCATATTGGACATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CAA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCAAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: GVCGCRSGEGMSINRAGARVDGG*FNVSCD
Trigger: ATCGCAAGATACATTGAACAAGCCACCGTCCACTCT...TGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR CAA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCACTCTTCATATCCAGATaGGAGCAGCCAACACGGCCG +
Preference number: 5 (lower is better)
Translates to: TGNREALSSLFISRLEQPLFISR*EQPTRP
Trigger: CGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAG...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GGTGTGTGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGCGCATCTGGGCCAGAGACATaGAATTTTCAGAACCAGCAT +
Preference number: 5 (lower is better)
Translates to: GVCGCRSGEGMSINRAGASGPET*NFQNQH
Trigger: ATGCTGGTTCTGAAAATTCAATGTCTCTGGCCCAGA...TGCGCCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACACACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS GCA 90 bp CTTGAAAGTGTGGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAATaGTGGAGTAGGCCAAGTTCAAAGCCTTGGATCCATGCAGATACT +
Preference number: 5 (lower is better)
Translates to: LESVEVPRSSGSCRK*WSRPSSKPWIHADT
Trigger: AGTATCTGCATGGATCCAAGGCTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCCGCAAGGCTGGGTCATaGAAGGGCTCATGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIRKAGS*KGSCPV
Trigger: GACGGGGCATGAGCCCTTCAATGACCCAGCCTTGCG...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTCCATGCCCAGAGACTaGAGCTGCCTGAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPSMPRD*SCLSSS
Trigger: CGAGCTGCTCAGGCAGCTCAAGTCTCTGGGCATGGA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CAA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TGTGGGTGCAGATCTGGAGAGGGAATGAGCATTAACAGGGCAGGTGCACCCTTGTCTGGGCCAGAGACATaGAATTTTCAGAACCAGCAT +
Preference number: 5 (lower is better)
Translates to: CGCRSGEGMSINRAGAPLSGPET*NFQNQH
Trigger: ATGCTGGTTCTGAAAATTCAATGTCTCTGGCCCAGA...CAAGGGTGCACCTGCCCTGTTAATGCTCATTCCCTCTCCAGATCTGCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS-3UTR CAA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTGTCTACGCGGCCACGTaGCTGCTGCTTTGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPVYAAT*LLLWGK
Trigger: CTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGAC...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS CCA 90 bp CCAGCCAAGGTCTGTTCTCCAGGAATGAACAATCCTCTGGAGCCCTaGCACGTTCATTACCATCTGTCTGCAGCCTTTATTCTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: PAKVCSPGMNNPLEP*HVHYHLSAAFILRR
Trigger: TCTTCTGAGAATAAAGGCTGCAGACAGATGGTAATGAACGTGCCAGGGCTCCAGAGGATTGTTCATTCCTGGAGAACAGACCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGCAGGTCCCCCTCTCTaGCGATGGCAATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRAGPPL*RWQFAE
Trigger: CTCAGCAAATTGCCATCGCAAGAGAGGGGGACCTGC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAGCAGAGGCGCTCCTTaGTCAGCAGGTCCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSRGAP*SAGPPL
Trigger: GAGAGGGGGACCTGCTGACAAAGGAGCGCCTCTGCT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATCCAGGAGGTCCACGTaGGACAGCGCGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSRRST*DSASSR
Trigger: TCTGGAGGACGCGCTGTCCAACGTGGACCTCCTGGA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: NREALSSLFISRLEQPTRRVDGG*FNVSCD
Trigger: ATCGCAAGATACATTGAACAAGCCACCGTCCACTCT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTACCACCTGGAGTTGCTaGAAGTACTTGTCGATTTTG +
Preference number: 5 (lower is better)
Translates to: EALSSLFISRLEQPTRPFTTWSC*KYLSIL
Trigger: CAAAATCGACAAGTACTTCAAGCAACTCCAGGTGGT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGTCGGGGCAGTCCTTGTaGGAGTACTTGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQSGQSL*EYLSVG
Trigger: CCCCACCGACAAGTACTCCAACAAGGACTGCCCCGA...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGCCTTGCAGCAGGCTCTaGACGACCTTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKPCSRL*TTFSSS
Trigger: GGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAGG...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAGCAGAGGCGCTCCTTaGTCAGCAGGTCCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSRGAP*SAGPPL
Trigger: GAGAGGGGGACCTGCTGACAAAGGAGCGCCTCTGCT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCGCAAGGCTGGGTCATaGAAGGGCTCATGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSRKAGS*KGSCPV
Trigger: GACGGGGCATGAGCCCTTCAATGACCCAGCCTTGCG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTCCAGGAGGTCCACGTaGGACAGCGCGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSRRST*DSASSR
Trigger: TCTGGAGGACGCGCTGTCCAACGTGGACCTCCTGGA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACCTTGCAGCAGGCTCTaGACGACCTTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQPCSRL*TTFSSS
Trigger: GGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAGG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGCTGCAGGATTGTGCCTaGCAGCAGGCTCTTGACGAC +
Preference number: 5 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQLQDCA*QQALDD
Trigger: GTCGTCAAGAGCCTGCTGCAAGGCACAATCCTGCAG...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGAGCCAGCAGCGTGCATaGCTGGTGACTTTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRSQQRA*LVTFQK
Trigger: CTTCTGGAAAGTCACCAGCAATGCACGCTGCTGGCT...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS-3UTR CAA 90 bp AAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAGCAGGTCCCCCTCTCTaGCGATGGCAATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KKVSVGGTLRTRMKNIARAGPPL*RWQFAE
Trigger: CTCAGCAAATTGCCATCGCAAGAGAGGGGGACCTGC...TCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTCGGGGCAGTCCTTGTaGGAGTACTTGTCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSGQSL*EYLSVG
Trigger: CCCCACCGACAAGTACTCCAACAAGGACTGCCCCGA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGATCATCGATGCCTCCTaGGTCTCCAGGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKIIDAS*VSRMWS
Trigger: GGACCACATCCTGGAGACCAAGGAGGCATCGATGAT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTACCGGCTCAGCAGCTaGTGGGTCATGCGGTTGATT +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKYRLSS*WVMRLI
Trigger: AATCAACCGCATGACCCACAAGCTGCTGAGCCGGTA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACCTTGCAGCAGGCTCTaGACGACCTTCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEPCSRL*TTFSSS
Trigger: GGAGCTGCTGAAGGTCGTCAAGAGCCTGCTGCAAGG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAACTGCAGGATTGTGCCTaGCAGCAGGCTCTTGACGAC +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQLQDCA*QQALDD
Trigger: GTCGTCAAGAGCCTGCTGCAAGGCACAATCCTGCAG...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTCACGTACTGCAGGATaGTGCCTTGCAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGISRTAG*CLAAGS
Trigger: AGAGCCTGCTGCAAGGCACAATCCTGCAGTACGTGA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTCAGTTACCCTAATCCCATGATGCCTGGAACCTTGATTACCGTTTTACATCAGCTCTTCATATCCAGATaGGAGCAGCCAACACGGCCG +
Preference number: 5 (lower is better)
Translates to: FSYPNPMMPGTLITVLHQLFISR*EQPTRP
Trigger: CGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAG...CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCATGGGATTAGGGTAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATGCTTAAGAGCTCCTTaGGGCCACTACATATTTTGG +
Preference number: 5 (lower is better)
Translates to: TGNREALSSLFISRLEQPCLRAP*GHYIFW
Trigger: CCAAAATATGTAGTGGCCCAAAGGAGCTCTTAAGCA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGATGATGCCTGGAACCTaGATTACCGTTTTACATCAG +
Preference number: 5 (lower is better)
Translates to: NREALSSLFISRLEQPTRMMPGT*ITVLHQ
Trigger: CTGATGTAAAACGGTAATCAAGGTTCCAGGCATCAT...CCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTTACACCTCATTTGCCTGCAGCGGGGCGTACTTaGATTCTAGTCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: SSYPDWSSQHGRFTPHLPAAGRT*ILVFSF
Trigger: AAATGAAAAGACTAGAATCAAAGTACGCCCCGCTGC...AGGCAAATGAGGTGTAAAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGATCTTGCGATGGCAATTaGCTGAGGGGTCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: KKVSVGGTLRTRMKNIARSCDGN*LRGPQS
Trigger: AGACTGGGGACCCCTCAGCAAATTGCCATCGCAAGA...TCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGCAGGTCCCCCTCTCTaGCGATGGCAATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSAGPPL*RWQFAE
Trigger: CTCAGCAAATTGCCATCGCAAGAGAGGGGGACCTGC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TGCCAGAAACAAGAACTTATAACACAAAGAAAGTATGCTTTTGCAAAAGGTCCAAGCAGAGGCGCTCCTTaGTCAGCAGGTCCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: CQKQELITQRKYAFAKGPSRGAP*SAGPPL
Trigger: GAGAGGGGGACCTGCTGACAAAGGAGCGCCTCTGCT...TGGACCTTTTGCAAAAGCATACTTTCTTTGTGTTATAAGTTCTTGTTTCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACGTTCTTCTTCTTCTaGATGGCCTGCCGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETFFFF*MACRSG
Trigger: GCCGCTGCGGCAGGCCATCAAGAAGAAGAAGAACGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAACGTTCTTCTTCTTCTaGATGGCCTGCCGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTTFFFF*MACRSG
Trigger: GCCGCTGCGGCAGGCCATCAAGAAGAAGAAGAACGT...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp TCAAGTGAGTGTAGAAGAATGACTCTCGATGAAATTTTTCTATGTCCAATATGGCGCAAGGCTGGGTCATaGAAGGGCTCATGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: SSECRRMTLDEIFLCPIWRKAGS*KGSCPV
Trigger: GACGGGGCATGAGCCCTTCAATGACCCAGCCTTGCG...CCATATTGGACATAGAAAAATTTCATCGAGAGTCATTCTTCTACACTCACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTCCTTGTTGGAGTACTaGTCGGTGGGGTGCACAAGC +
Preference number: 5 (lower is better)
Translates to: LPEHPIEKQFCRNVMATISLLEY*SVGCTS
Trigger: GCTTGTGCACCCCACCGACAAGTACTCCAACAAGGA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAACTGTCGGGGCAGTCCTaGTTGGAGTACTTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSELSGQS*LEYLSV
Trigger: CACCGACAAGTACTCCAACAAGGACTGCCCCGACAG...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAATCATCGATGCCTCCTaGGTCTCCAGGATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQIIDAS*VSRMWS
Trigger: GGACCACATCCTGGAGACCAAGGAGGCATCGATGAT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTGTAGTTTCTAAGATAAGCACAGCTACCACCTCTAAATCTGCAGCAGAATGCTTGTGGGTCATGCGGTaGATTTCCAACAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: SVVSKISTATTSKSAAECLWVMR*ISNRPS
Trigger: GGATGGCCTGTTGGAAATCAACCGCATGACCCACAA...GCATTCTGCTGCAGATTTAGAGGTGGTAGCTGTGCTTATCTTAGAAACTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTGTGGGTCATGCGGTaGATTTCCAACAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKLWVMR*ISNRPS
Trigger: GGATGGCCTGTTGGAAATCAACCGCATGACCCACAA...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATACCGGCTCAGCAGCTaGTGGGTCATGCGGTTGATT +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQYRLSS*WVMRLI
Trigger: AATCAACCGCATGACCCACAAGCTGCTGAGCCGGTA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCTGCAGGATTGTGCCTaGCAGCAGGCTCTTGACGAC +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSLQDCA*QQALDD
Trigger: GTCGTCAAGAGCCTGCTGCAAGGCACAATCCTGCAG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTCCGGAAAAGTAGGCGAGGCGGTAGTCTAGACCGATaGTTTTTCATTCTGACAGAT +
Preference number: 5 (lower is better)
Translates to: CIICFWTVSKGLRKSRRGGSLDR*FFILTD
Trigger: ATCTGTCAGAATGAAAAACAATCGGTCTAGACTACC...GCCTCGCCTACTTTTCCGGAGGCCTTTGGAAACTGTCCAGAAGCATATGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCATTTGTACCAAGTACTTaGCTTAAGAGCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: TGNREALSSLFISRLEQPFVPST*LKSSFG
Trigger: CCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAAA...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTGTGGCTCCTGTTTGTTaGATGATGATTGGTTTTATT +
Preference number: 5 (lower is better)
Translates to: EALSSLFISRLEQPTRPFVAPVC*MMIGFI
Trigger: AATAAAACCAATCATCATCAAACAAACAGGAGCCAC...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAACACGGCCGTTTAAAAGTGGCTCCTGTTaGTTTGATGATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: EALSSLFISRLEQPTRPFKSGSC*FDDDWF
Trigger: AAACCAATCATCATCAAACAAACAGGAGCCACTTTT...AAACGGCCGTGTTGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS TCA 90 bp TGCACGTCCATCGAGATTTATTTTCCTCGTAGTGGGCGCTGGTCTTaGTATATCTTGCCAGTTCTATTTGCATGTCCCCAAATAGCGGAA +
Preference number: 5 (lower is better)
Translates to: CTSIEIYFPRSGRWS*YILPVLFACPQIAE
Trigger: TTCCGCTATTTGGGGACATGCAAATAGAACTGGCAAGATATATCAAGACCAGCGCCCACTACGAGGAAAATAAATCTCGATGGACGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTTCCTTGTTGGAGTACTaGTCGGTGGGGTGCACAAGC +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSLLEY*SVGCTS
Trigger: GCTTGTGCACCCCACCGACAAGTACTCCAACAAGGA...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTGGGTGATCAGACGATaGAGGTCTATTGATCTGCCG +
Preference number: 5 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIWVIRR*RSIDLP
Trigger: CGGCAGATCAATAGACCTCAATCGTCTGATCACCCA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAATCACGTACTGCAGGATaGTGCCTTGCAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSESRTAG*CLAAGS
Trigger: AGAGCCTGCTGCAAGGCACAATCCTGCAGTACGTGA...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACATCACGTACTGCAGGATaGTGCCTTGCAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTSRTAG*CLAAGS
Trigger: AGAGCCTGCTGCAAGGCACAATCCTGCAGTACGTGA...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCCGGAACCACCTGGAGTaGCTTGAAGTACTTGTCGAT +
Preference number: 5 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIRNHLE*LEVLVD
Trigger: ATCGACAAGTACTTCAAGCAACTCCAGGTGGTTCCG...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTCTGTCGGGGCAGTCCTaGTTGGAGTACTTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLSGQS*LEYLSV
Trigger: CACCGACAAGTACTCCAACAAGGACTGCCCCGACAG...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAATGGGTGATCAGACGATaGAGGTCTATTGATCTGCCG +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQWVIRR*RSIDLP
Trigger: CGGCAGATCAATAGACCTCAATCGTCTGATCACCCA...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAATTGTGGGTCATGCGGTaGATTTCCAACAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSELWVMR*ISNRPS
Trigger: GGATGGCCTGTTGGAAATCAACCGCATGACCCACAA...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGCCTTTGAGAATCTGGAACTaGCGAATTCTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: LLLFCAVHHMLLDSFQRPLRIWN*RILSTI
Trigger: GATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAA...AGGCCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp ACAGGTAACAGAGAGGCACTGAGTAGCCTCTTCATATCCAGATTGGAGCAGCCAAGGACAGAGACTCATTaGAACATGCATAGGTTAATA +
Preference number: 5 (lower is better)
Translates to: TGNREALSSLFISRLEQPRTETH*NMHRLI
Trigger: TATTAACCTATGCATGTTCAAATGAGTCTCTGTCCT...TGGCTGCTCCAATCTGGATATGAAGAGGCTACTCAGTGCCTCTCTGTTACCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIRVDGG*FNVSCD
Trigger: ATCGCAAGATACATTGAACAAGCCACCGTCCACTCT...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCAGCAGCCAAAGCACAGCGAACATGTaGATGAATTTGCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: HPIEKQFCRNVMATISSQSTANM*MNLPSV
Trigger: CACACTGGGCAAATTCATCAACATGTTCGCTGTGCT...TTGGCTGCTGATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACGGAACCACCTGGAGTaGCTTGAAGTACTTGTCGAT +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTRNHLE*LEVLVD
Trigger: ATCGACAAGTACTTCAAGCAACTCCAGGTGGTTCCG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSERHAM*SYGVQR
Trigger: GCGCTGCACTCCGTAACTCAACATGGCATGCCTTTC...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACCAGTTTTCTCCCCCTaGAGGACAGAGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTPVFSP*RTETHL
Trigger: CAAATGAGTCTCTGTCCTCAAGGGGGAGAAAACTGG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS TCA 90 bp CTGCTGCAGCGTTTCACTGAAATTTATCAAGTGAGTGTAGAAGAATaGCTCTCGATGAAATTTTTCTATGTCCAATATGGTGGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LLQRFTEIYQVSVEE*LSMKFFYVQYGGPL
Trigger: GAGGGGCCCACCATATTGGACATAGAAAAATTTCATCGAGAGTCATTCTTCTACACTCACTTGATAAATTTCAGTGAAACGCTGCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000625276.2
ENST00000625601.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp GTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAACTTAGCAGCGGGGCGTACTTaGATTCTAGTCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: VGGTLRTRMKNIARNKNLAAGRT*ILVFSF
Trigger: AAATGAAAAGACTAGAATCAAAGTACGCCCCGCTGC...TAAGTTCTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCGCAGCGGGGCGTACTTaGATTCTAGTCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: LPEHPIEKQFCRNVMATIAAGRT*ILVFSF
Trigger: AAATGAAAAGACTAGAATCAAAGTACGCCCCGCTGC...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAGCACAGCGAACATGTaGATGAATTTGCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSSTANM*MNLPSV
Trigger: CACACTGGGCAAATTCATCAACATGTTCGCTGTGCT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CTGCCAGAACATCCCATAGAAAAACAATTTTGTAGGAACGTGATGGCAACAATCTTGAGAATCTGGAACTaGCGAATTCTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: LPEHPIEKQFCRNVMATILRIWN*RILSTI
Trigger: GATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAA...GATTGTTGCCATCACGTTCCTACAAAATTGTTTTTCTATGGGATGTTCTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCGTGATGATCTCATCATaGAGAATCTGGAACTTGCGA +
Preference number: 5 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIVMISS*RIWNLR
Trigger: TCGCAAGTTCCAGATTCTCAATGATGAGATCATCAC...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp CACTTACTACTTTTCTGTGCCGTGCATCATATGCTTCTGGACAGTTTCCAAAGGGGTAGTCTAGACCGATaGTTTTTCATTCTGACAGAT +
Preference number: 5 (lower is better)
Translates to: HLLLFCAVHHMLLDSFQRGSLDR*FFILTD
Trigger: ATCTGTCAGAATGAAAAACAATCGGTCTAGACTACC...CCTTTGGAAACTGTCCAGAAGCATATGATGCACGGCACAGAAAAGTAGTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCTTTGTACCAAGTACTTaGCTTAAGAGCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SDVTLDFVTTGFSGSRGIFVPST*LKSSFG
Trigger: CCCAAAGGAGCTCTTAAGCAAAGTACTTGGTACAAA...GATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACACACGTTGCTGCTGCTTaGGGGAAAGAACAACTTGTA +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTHVAAA*GKEQLV
Trigger: TACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTG...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617556.4
CDS CCA 90 bp TTCAGGTACTTATCCAGGATGGTGATGATCTCATCATTGAGAATCTaGAACTTGCGAATTCTCTCCACCATCTTCTTCAAAGGCACATTT +
Preference number: 5 (lower is better)
Translates to: FRYLSRMVMISSLRI*NLRILSTIFFKGTF
Trigger: AAATGTGCCTTTGAAGAAGATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGAGATCATCACCATCCTGGATAAGTACCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAGCAGCGGGGCGTACTTaGATTCTAGTCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSEAAGRT*ILVFSF
Trigger: AAATGAAAAGACTAGAATCAAAGTACGCCCCGCTGC...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGTTCACTATTTTCTGAAACCACCTGGAGTTGCTaGAAGTACTTGTCGATTTTG +
Preference number: 5 (lower is better)
Translates to: LSQLDLVEAGESSSLFSETTWSC*KYLSIL
Trigger: CAAAATCGACAAGTACTTCAAGCAACTCCAGGTGGT...TTCAGAAAATAGTGAACTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAACAAGAAAGAAAGTATGCTTTaGCAAAAGGTCCATAGATGG +
Preference number: 5 (lower is better)
Translates to: VSVGGTLRTRMKNIARNKKESML*QKVHRW
Trigger: CCATCTATGGACCTTTTGCAAAAGCATACTTTCTTT...CTTGTTTCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp AAGAAAGTTTCTGTTGGTGGCACCTTACGTACTAGGATGAAAAACATTGCCAGAAAAAGAAAGTTTCTGTaGGTGGCACCTTACGTACTA +
Preference number: 5 (lower is better)
Translates to: KKVSVGGTLRTRMKNIARKRKFL*VAPYVL
Trigger: TAGTACGTAAGGTGCCACCAACAGAAACTTTCTTTT...TCTGGCAATGTTTTTCATCCTAGTACGTAAGGTGCCACCAACAGAAACTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561263.2
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTCCAAATCCCATGACTTaGAGAAGCATGTGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSPNPMT*RSMCFS
Trigger: TGAGAAACACATGCTTCTCAAAGTCATGGGATTTGG...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000617928.5
CDS-3UTR CAA 90 bp AAACATGTTCGTGACTCTACTGGTAGTCTAGACCGATTGTTTTTCATTCTGACAGTGATGATCTCATCATaGAGAATCTGGAACTTGCGA +
Preference number: 5 (lower is better)
Translates to: KHVRDSTGSLDRLFFILTVMISS*RIWNLR
Trigger: TCGCAAGTTCCAGATTCTCAATGATGAGATCATCAC...TGTCAGAATGAAAAACAATCGGTCTAGACTACCAGTAGAGTCACGAACATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTGTGATGATCTCATCATaGAGAATCTGGAACTTGCGA +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSVMISS*RIWNLR
Trigger: TCGCAAGTTCCAGATTCTCAATGATGAGATCATCAC...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGGTGGCTCCTGTTTGTTaGATGATGATTGGTTTTATT +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKVAPVC*MMIGFI
Trigger: AATAAAACCAATCATCATCAAACAAACAGGAGCCAC...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp GATGTCACGTTAGATTTTGTCACAACTGGATTTAGTGGAAGCAGGGGAATCAAGAAAAGTGGCTCCTGTTaGTTTGATGATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: DVTLDFVTTGFSGSRGIKKSGSC*FDDDWF
Trigger: AAACCAATCATCATCAAACAAACAGGAGCCACTTTT...CTTGATTCCCCTGCTTCCACTAAATCCAGTTGTGACAAAATCTAACGTGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTTGAGAATCTGGAACTaGCGAATTCTCTCCACCATC +
Preference number: 5 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSLRIWN*RILSTI
Trigger: GATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
CDS-3UTR CAA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTTGCTTAAGAGCTCCTTaGGGCCACTACATATTTTGG +
Preference number: 5 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSCLRAP*GHYIFW
Trigger: CCAAAATATGTAGTGGCCCAAAGGAGCTCTTAAGCA...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS CCA 90 bp CATGGTTCTCACCATGTAAAGCTGGATTATCCAAGGAAACATTTGTaGGGGAGAAAATATACATGGTACATTAGTTATGCCAAACTCAAA +
Preference number: 5 (lower is better)
Translates to: HGSHHVKLDYPRKHL*GRKYTWYISYAKLK
Trigger: TTTGAGTTTGGCATAACTAATGTACCATGTATATTTTCTCCCCCACAAATGTTTCCTTGGATAATCCAGCTTTACATGGTGAGAACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS-3UTR CAA 90 bp TCCCTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTTGAGTAGGACAGAGACTCATTaGAACATGCATAGGTTAATA +
Preference number: 5 (lower is better)
Translates to: SLKISLNSLRRERHAMLSRTETH*NMHRLI
Trigger: TATTAACCTATGCATGTTCAAATGAGTCTCTGTCCT...ACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS TCA 90 bp CTAGCAAATACCCACCTCAACTATACTGCCATAGGAATGACGTGGTaGATTAATATGGGGATACAGTGGATTAAGTATGTTATTAAAAAT +
Preference number: 5 (lower is better)
Translates to: LANTHLNYTAIGMTW*INMGIQWIKYVIKN
Trigger: ATTTTTAATAACATACTTAATCCACTGTATCCCCATATTAATTCACCACGTCATTCCTATGGCAGTATAGTTGAGGTGGGTATTTGCTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS-3UTR CAA 90 bp TCTATAACCTTTCGATCTGATGTCACGTTAGATTTTGTCACAACTGGATTTAGTACCTACATCTGTGCTTaGTACATAAAAGAACCAGTT +
Preference number: 5 (lower is better)
Translates to: SITFRSDVTLDFVTTGFSTYICA*YIKEPV
Trigger: AACTGGTTCTTTTATGTACAAAGCACAGATGTAGGT...ACTAAATCCAGTTGTGACAAAATCTAACGTGACATCAGATCGAAAGGTTATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000617928.5
CDS TCA 72 bp TGGCTGGCACCACGCACAGGCCGAGGGCCGTCCCCCTaGCCCTCCTGCAGAGCCAGCAGCGTGCATTGCTGG +
Preference number: 6 (lower is better)
Translates to: WLAPRTGRGPSP*PSCRASSVHCW
Trigger: CCAGCAATGCACGCTGCTGGCTCTGCAGGAGGGTCAGGGGGACGGCCCTCGGCCTGTGCGTGGTGCCAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS CCA 72 bp AGCTTGCGGTACTCCGCGTCCGTCTTCTGGGCCTCCTaGCGGCCCGAGCCCGTGACCACCTCGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLRYSASVFWAS*RPEPVTTSLLL
Trigger: CAGCAACAGCGAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGACGGACGCGGAGTACCGCAAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CCA 72 bp CCTCCACGCCACCTACCCCTGCTGTCCAGCACCCTGTaGGGCAGCGTGCACGTGTGGCCTGCTACTGCCACC +
Preference number: 6 (lower is better)
Translates to: PPRHLPLLSSTL*GSVHVWPATAT
Trigger: GGTGGCAGTAGCAGGCCACACGTGCACGCTGCCCCACAGGGTGCTGGACAGCAGGGGTAGGTGGCGTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS TCA 72 bp GGTCCTGGGCGGGCCCTGGGAGTTTCCTTGGCCGAGTaGGTCACTCGGGCTGGCCGGGAATGCGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: GPGRALGVSLAE*VTRAGRECARK
Trigger: TTTCCTGGCGCATTCCCGGCCAGCCCGAGTGACTCACTCGGCCAAGGAAACTCCCAGGGCCCGCCCAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611832.4
ENST00000630158.2
CDS CAA 90 bp AGGCACGTGTGGGTGGCAGGGCAGGTGCACTTGTTCCCACAGGCCTaGCAAGCCCTCACGTGCGCTGCTCTGGAGCTCGCCCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: RHVWVAGQVHLFPQA*QALTCAALELAQAA
Trigger: TGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCACCTGCCCTGCCACCCACACGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 72 bp TCCCACAGGCCTTGCAAGCCCTCACGTGCGCTGCTCTaGAGCTCGCCCAGGCTGCACTGTCCGATGTGGCAG +
Preference number: 6 (lower is better)
Translates to: SHRPCKPSRALL*SSPRLHCPMWQ
Trigger: CTGCCACATCGGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CAA 72 bp TGGGTGGCAGGGCAGGTGCACTTGTTCCCACAGGCCTaGCAAGCCCTCACGTGCGCTGCTCTGGAGCTCGCC +
Preference number: 6 (lower is better)
Translates to: WVAGQVHLFPQA*QALTCAALELA
Trigger: GGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCACCTGCCCTGCCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp GTGCACTTGTTCCCACAGGCCTTGCAAGCCCTCACGTaGGCTGCTCTGGAGCTCGCCCAGGCTGCACTGTCC +
Preference number: 6 (lower is better)
Translates to: VHLFPQALQALT*AALELAQAALS
Trigger: GGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAGTGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp GATGAATACGCAGGGCCCTGCTCTGAAGTGCAGAGATaGTCACAGGGACACGCACTGTGCCCGCCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: DEYAGPCSEVQR*SQGHALCPPAP
Trigger: GGGCGCTGGCGGGCACAGTGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp CTTGTTCCCACAGGCCTTGCAAGCCCTCACGTGCGCTaGTCTGGAGCTCGCCCAGGCTGCACTGTCCGATGT +
Preference number: 6 (lower is better)
Translates to: LVPTGLASPHVR*SGARPGCTVRC
Trigger: ACATCGGACAGTGCAGCCTGGGCGAGCTCCAGAGCAGCGCACGTGAGGGCTTGCAAGGCCTGTGGGAACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 72 bp GTGCAGGCGGGGCTCAAGGGACGAGAACCTGAGTGCTaGAGGGTCCCACGGCGCGGCGTGGTACTTTTATGT +
Preference number: 6 (lower is better)
Translates to: VQAGLKGREPEC*RVPRRGVVLLC
Trigger: ACATAAAAGTACCACGCCGCGCCGTGGGACCCTCCAGCACTCAGGTTCTCGTCCCTTGAGCCCCGCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622576.1
ENST00000627204.1
CDS CAA 90 bp CCGAGGGGTCCGGGTGCCTGTCTACGCGGCCACGTTGCTGCTGCTTaGGGGAAAGAACAACTTGTAGCGGAGCAGTTCGCCTCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: PRGPGACLRGHVAAA*GKEQLVAEQFASVP
Trigger: TGGCACGGAGGCGAACTGCTCCGCTACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGACAGGCACCCGGACCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS GCA 72 bp GGCCGTCCCCCTGACCCTCCTGCAGAGCCAGCAGCGTaGATTGCTGGTGACTTTCCAGAAGAGTGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: GRPPDPPAEPAA*IAGDFPEEWQK
Trigger: CTTCTGCCACTCTTCTGGAAAGTCACCAGCAATGCACGCTGCTGGCTCTGCAGGAGGGTCAGGGGGACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS GCA 72 bp CCCGAGGGGTCCGGGTGCCTGTCTACGCGGCCACGTTaGTGCTGCTTTGGGGAAAGAACAACTTGTAGCGGA +
Preference number: 6 (lower is better)
Translates to: PEGSGCLSTRPR*CCFGERTTCSG
Trigger: TCCGCTACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGACAGGCACCCGGACCCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS GCA 72 bp GAGGGGTCCGGGTGCCTGTCTACGCGGCCACGTTGCTaGTGCTTTGGGGAAAGAACAACTTGTAGCGGAGCA +
Preference number: 6 (lower is better)
Translates to: EGSGCLSTRPRC*CFGERTTCSGA
Trigger: TGCTCCGCTACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGACAGGCACCCGGACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS CCA 72 bp GGGCAAACTTCTCCTCGCTGGTGTAGTTGTAGCGCGTaGCACGCTCGTACTCTTCAGCGCTGTCGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: GQTSPRWCSCSA*HARTLQRCRGS
Trigger: ACTGCCCCGACAGCGCTGAAGAGTACGAGCGTGCCACGCGCTACAACTACACCAGCGAGGAGAAGTTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp CCGGGTGCCTGTCTACGCGGCCACGTTGCTGCTGCTTaGGGGAAAGAACAACTTGTAGCGGAGCAGTTCGCC +
Preference number: 6 (lower is better)
Translates to: PGACLRGHVAAA*GKEQLVAEQFA
Trigger: GGCGAACTGCTCCGCTACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGACAGGCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS TCA 72 bp CCACGGCGATACCCTGGTAGCCGAGAAGCCGGCAGATaGCTTGAAAGTGTGGAGGTCCCACGAAGTTCCGGT +
Preference number: 6 (lower is better)
Translates to: PRRYPGSREAGR*LESVEVPRSSG
Trigger: ACCGGAACTTCGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCGGCTACCAGGGTATCGCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS GCA 72 bp GGGCTTCAGAGCCAGCTCCAGGGAGAGGGGGCAATCTaGCTTCTGCTGAATCTGCTCCAGTCTCAAGGGTAC +
Preference number: 6 (lower is better)
Translates to: GLQSQLQGEGAI*LLLNLLQSQGY
Trigger: GTACCCTTGAGACTGGAGCAGATTCAGCAGAAGGCAGATTGCCCCCTCTCCCTGGAGCTGGCTCTGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610365.4
ENST00000628954.2
CDS GCA 72 bp GGGTCCGGGTGCCTGTCTACGCGGCCACGTTGCTGCTaGTTTGGGGAAAGAACAACTTGTAGCGGAGCAGTT +
Preference number: 6 (lower is better)
Translates to: GSGCLSTRPRCC*FGERTTCSGAV
Trigger: AACTGCTCCGCTACAAGTTGTTCTTTCCCCAAAGCAGCAGCAACGTGGCCGCGTAGACAGGCACCCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS CAA 72 bp CGCTCGTACTCTTCAGCGCTGTCGGGGCAGTCCTTGTaGGAGTACTTGTCGGTGGGGTGCACAAGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: RSYSSALSGQSL*EYLSVGCTSFQ
Trigger: CTGGAAGCTTGTGCACCCCACCGACAAGTACTCCAACAAGGACTGCCCCGACAGCGCTGAAGAGTACGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp GCACGCTCGTACTCTTCAGCGCTGTCGGGGCAGTCCTaGTTGGAGTACTTGTCGGTGGGGTGCACAAGCTTC +
Preference number: 6 (lower is better)
Translates to: ARSYSSALSGQS*LEYLSVGCTSF
Trigger: GAAGCTTGTGCACCCCACCGACAAGTACTCCAACAAGGACTGCCCCGACAGCGCTGAAGAGTACGAGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp GTCAGGTACCGGCTCAGCAGCTTGTGGGTCATGCGGTaGATTTCCAACAGGCCATCCAGCTCCTGTGGCACC +
Preference number: 6 (lower is better)
Translates to: VRYRLSSLWVMR*ISNRPSSSCGT
Trigger: GGTGCCACAGGAGCTGGATGGCCTGTTGGAAATCAACCGCATGACCCACAAGCTGCTGAGCCGGTACCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CAA 90 bp CGCGTGGCACGCTCGTACTCTTCAGCGCTGTCGGGGCAGTCCTTGTaGGAGTACTTGTCGGTGGGGTGCACAAGCTTCCAGGAATACACT +
Preference number: 6 (lower is better)
Translates to: RVARSYSSALSGQSL*EYLSVGCTSFQEYT
Trigger: AGTGTATTCCTGGAAGCTTGTGCACCCCACCGACAAGTACTCCAACAAGGACTGCCCCGACAGCGCTGAAGAGTACGAGCGTGCCACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS GCA 72 bp ACTCTAAGGATGAATACGCAGGGCCCTGCTCTGAAGTaGAGAGATGCTCACAGGGACACGCACTGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: TLRMNTQGPALK*RDAHRDTHCAR
Trigger: GCGGGCACAGTGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATCCTTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CAA 90 bp CATGACCACGGCGATACCCTGGTAGCCGAGAAGCCGGCAGATGACTaGAAAGTGTGGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAAT +
Preference number: 6 (lower is better)
Translates to: HDHGDTLVAEKPADD*KVWRSHEVPVAAVN
Trigger: ATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCGGCTACCAGGGTATCGCCGTGGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CCA 72 bp TCCCCCTCTTTCACATGGACTCGCGGCAAGATGTTCTaGAAAGGAGCCGCGTGCAGCAGGTCACACACTTCT +
Preference number: 6 (lower is better)
Translates to: SPSFTWTRGKMF*KGAACSRSHTS
Trigger: AGAAGTGTGTGACCTGCTGCACGCGGCTCCTTTCCAGAACATCTTGCCGCGAGTCCATGTGAAAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000557890.1
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CCA 72 bp TGGCGATCACCTCCACTAGGGCAAACTTCTCCTCGCTaGTGTAGTTGTAGCGCGTGGCACGCTCGTACTCTT +
Preference number: 6 (lower is better)
Translates to: WRSPPLGQTSPR*CSCSAWHARTL
Trigger: AAGAGTACGAGCGTGCCACGCGCTACAACTACACCAGCGAGGAGAAGTTTGCCCTAGTGGAGGTGATCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp GCACAGCAAAACGCCGCTGCTGCCCAAGAAGTACGATaGTCATACAGCCAGCCCAGTGTAGCCCATCACCAA +
Preference number: 6 (lower is better)
Translates to: AQQNAAAAQEVR*SYSQPSVAHHQ
Trigger: TTGGTGATGGGCTACACTGGGCTGGCTGTATGATCATCGTACTTCTTGGGCAGCAGCGGCGTTTTGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000561263.2
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp TCAGGTACCGGCTCAGCAGCTTGTGGGTCATGCGGTTaGTTTCCAACAGGCCATCCAGCTCAACTATGGAGG +
Preference number: 6 (lower is better)
Translates to: SGTGSAACGSCG*FPTGHPAQLWR
Trigger: CCTCCATAGTTGAGCTGGATGGCCTGTTGGAAATCAACCGCATGACCCACAAGCTGCTGAGCCGGTACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619290.4
ENST00000625276.2
ENST00000625601.2
ENST00000628954.2
ENST00000630629.2
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp CCCAGTGTCTGCCAGCCAAGGTCTGTTCTCCAGGAATaGACAATCCTCTGGAGCCCTGGCACGTTCATTACC +
Preference number: 6 (lower is better)
Translates to: PSVCQPRSVLQE*TILWSPGTFIT
Trigger: GGTAATGAACGTGCCAGGGCTCCAGAGGATTGTTCATTCCTGGAGAACAGACCTTGGCTGGCAGACACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp TCTGAGGACAATCGGATTTTCCTTCCCTGCCTGCCCTaGTCAGACAGCCCAAGGACTTCTTCCTCACCTGGA +
Preference number: 6 (lower is better)
Translates to: SEDNRIFLPCLP*SDSPRTSSSPG
Trigger: TCCAGGTGAGGAAGAAGTCCTTGGGCTGTCTGAGCAGGGCAGGCAGGGAAGGAAAATCCGATTGTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 72 bp CTGGTAGCCGAGAAGCCGGCAGATGACTTGAAAGTGTaGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAAT +
Preference number: 6 (lower is better)
Translates to: LVAEKPADDLKV*RSHEVPVAAVN
Trigger: ATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTCAAGTCATCTGCCGGCTTCTCGGCTACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp TACATGGCTGCTGAGACGCGCTGGGTGATCAGACGATaGAGGTCTATTGATCTGCCGAGGAGCTGCACATGC +
Preference number: 6 (lower is better)
Translates to: YMAAETRWVIRR*RSIDLPRSCTC
Trigger: GCATGTGCAGCTCCTCGGCAGATCAATAGACCTCAATCGTCTGATCACCCAGCGCGTCTCAGCAGCCATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619290.4
ENST00000621105.1
ENST00000625276.2
ENST00000625601.2
ENST00000628954.2
ENST00000628956.1
ENST00000630629.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp GTCAGGTACCGGCTCAGCAGCTTGTGGGTCATGCGGTaGATTTCCAACAGGCCATCCAGCTCAACTATGGAG +
Preference number: 6 (lower is better)
Translates to: VRYRLSSLWVMR*ISNRPSSSTME
Trigger: CTCCATAGTTGAGCTGGATGGCCTGTTGGAAATCAACCGCATGACCCACAAGCTGCTGAGCCGGTACCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619290.4
ENST00000625276.2
ENST00000625601.2
ENST00000628954.2
ENST00000630629.2
ENST00000671714.1
ENST00000672091.1
CDS GCA 72 bp GTGGAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAATaGTGGAGTAGGCCAAGTTCAAAGCCTTGGATCCAT +
Preference number: 6 (lower is better)
Translates to: VEVPRSSGSCRK*WSRPSSKPWIH
Trigger: ATGGATCCAAGGCTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS GCA 72 bp AGCCTGTTTGACTCTAAGGATGAATACGCAGGGCCCTaGTCTGAAGTGCAGAGATGCTCACAGGGACACGCA +
Preference number: 6 (lower is better)
Translates to: SLFDSKDEYAGP*SEVQRCSQGHA
Trigger: TGCGTGTCCCTGTGAGCATCTCTGCACTTCAGAGCAGGGCCCTGCGTATTCATCCTTAGAGTCAAACAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 72 bp GAGGTCCCACGAAGTTCCGGTAGCTGCCGTAAATGCTaGAGTAGGCCAAGTTCAAAGCCTTGGATCCATGCA +
Preference number: 6 (lower is better)
Translates to: EVPRSSGSCRKC*SRPSSKPWIHA
Trigger: TGCATGGATCCAAGGCTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp GATTCACAGTTCCTTTCCTTGGCTCTGGTGAAGGTCTaGGGACAATCGGATTTTCCTTCCCTGCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: DSQFLSLALVKV*GQSDFPSLPAL
Trigger: CAGGGCAGGCAGGGAAGGAAAATCCGATTGTCCTCAGACCTTCACCAGAGCCAAGGAAAGGAACTGTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp CTTGAAAGTGTGGAGGTCCCACGAAGTTCCGGTAGCTaGCGTAAATGCTGGAGTAGGCCAAGTTCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: LESVEVPRSSGS*RKCWSRPSSKP
Trigger: AGGCTTTGAACTTGGCCTACTCCAGCATTTACGGCAGCTACCGGAACTTCGTGGGACCTCCACACTTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CAA 90 bp CTAAAAATCTCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGCGTGCCCTCAGCTGCTGGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: LKISLNSLRRERHAM*SYGVQRVPSAAGEG
Trigger: TCCCTCGCCAGCAGCTGAGGGCACGCGCTGCACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGAGATTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
CDS TCA 72 bp CATGGTACATTAGTTATGCCAAACTCAAAAAGCCCATaGGAGAAGGACTGCTCCGCTACGCCCTGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: HGTLVMPNSKSP*EKDCSATPWSG
Trigger: TCCCGACCAGGGCGTAGCGGAGCAGTCCTTCTCTCATGGGCTTTTTGAGTTTGGCATAACTAATGTACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS CAA 72 bp TCACTAAATAGTTTACGGAGAGAAAGGCATGCCATGTaGAGTTACGGAGTGCAGCGCGTGCCCTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SLNSLRRERHAM*SYGVQRVPSAA
Trigger: AGCAGCTGAGGGCACGCGCTGCACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGTAAACTATTTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
CDS TCA 72 bp AAACCCTCGATTCACAGTTCCTTTCCTTGGCTCTGGTaGAGGTCTGAGGACAATCGGATTTTCCTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: KPSIHSSFPWLW*RSEDNRIFLPC
Trigger: GCAGGGAAGGAAAATCCGATTGTCCTCAGACCTTCACCAGAGCCAAGGAAAGGAACTGTGAATCGAGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp TGGGCGCTGGTCTTGATATATCTTGCCAGTTCTATTTaGATGTCCCCAAATAGCGGAACCACCTGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: WALVLIYLASSI*MSPNSGTTWSC
Trigger: GCAACTCCAGGTGGTTCCGCTATTTGGGGACATGCAAATAGAACTGGCAAGATATATCAAGACCAGCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp CTCCAGCATCTCGTTCATGCTAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGATGCCAGTAACAAATGC +
Preference number: 6 (lower is better)
Translates to: LQHLVHARVDGG*FNVSCDASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAAGCCACCGTCCACTCTAGCATGAACGAGATGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000610365.4
ENST00000611832.4
ENST00000613006.4
ENST00000617928.5
ENST00000625276.2
ENST00000628747.2
ENST00000628954.2
ENST00000630158.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp GCCAGTCGGCCCTGTTCCGTTGCTTTGGTTTTCTTCTaGAGGAAGCTGTATGACAGGTACACTGAATCTTCA +
Preference number: 6 (lower is better)
Translates to: ASRPCSVALVFF*RKLYDRYTESS
Trigger: TGAAGATTCAGTGTACCTGTCATACAGCTTCCTCAAGAAGAAAACCAAAGCAACGGAACAGGGCCGACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS TCA 72 bp CCAGTCGGCCCTGTTCCGTTGCTTTGGTTTTCTTCTTaGGGAAGCTGTATGACAGGTACACTGAATCTTCAT +
Preference number: 6 (lower is better)
Translates to: PVGPVPLLWFSS*GSCMTGTLNLH
Trigger: ATGAAGATTCAGTGTACCTGTCATACAGCTTCCTCAAGAAGAAAACCAAAGCAACGGAACAGGGCCGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CAA 90 bp GAAATAGATGCCAGTCGGCCCTGTTCCGTTGCTTTGGTTTTCTTCTaGAGGAAGCTGTATGACAGGTACACTGAATCTTCATCATCCATG +
Preference number: 6 (lower is better)
Translates to: EIDASRPCSVALVFF*RKLYDRYTESSSSM
Trigger: CATGGATGATGAAGATTCAGTGTACCTGTCATACAGCTTCCTCAAGAAGAAAACCAAAGCAACGGAACAGGGCCGACTGGCATCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CCA 72 bp CATCTGTCTGCAGCCTTTATTCTCAGAAGATCAATTTaGCTGGCGACCAAACCCTCGATTCACAGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: HLSAAFILRRSI*LATKPSIHSSF
Trigger: AAAGGAACTGTGAATCGAGGGTTTGGTCGCCAGCCAAATTGATCTTCTGAGAATAAAGGCTGCAGACAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS GCA 72 bp GTTCAAAGCCTTGGATCCATGCAGATACTGAGGCTGTaGATTAGGCTGCTTATCTCTTTGAAATTCCTGAGA +
Preference number: 6 (lower is better)
Translates to: VQSLGSMQILRL*IRLLISLKFLR
Trigger: TCTCAGGAATTTCAAAGAGATAAGCAGCCTAATGCACAGCCTCAGTATCTGCATGGATCCAAGGCTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CAA 90 bp TCGCCTGACTTCAGGTACTTATCCAGGATGGTGATGATCTCATCATaGAGAATCTGGAACTTGCGAATTCTCTCCACCATCTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SPDFRYLSRMVMISS*RIWNLRILSTIFFK
Trigger: TTTGAAGAAGATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGAGATCATCACCATCCTGGATAAGTACCTGAAGTCAGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp ATCGAGATTTATTTTCCTCGTAGTGGGCGCTGGTCTTaGTATATCTTGCCAGTTCTATTTGCATGTCCCCAA +
Preference number: 6 (lower is better)
Translates to: IEIYFPRSGRWS*YILPVLFACPQ
Trigger: TTGGGGACATGCAAATAGAACTGGCAAGATATATCAAGACCAGCGCCCACTACGAGGAAAATAAATCTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp TTCAGGTACTTATCCAGGATGGTGATGATCTCATCATaGAGAATCTGGAACTTGCGAATTCTCTCCACCATC +
Preference number: 6 (lower is better)
Translates to: FRYLSRMVMISS*RIWNLRILSTI
Trigger: GATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGAGATCATCACCATCCTGGATAAGTACCTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS TCA 72 bp TTGGACAGTAATGGCCTCGATCAAAGCCTCGACCAATaGTTTTACTCAAAATCATATTTGGCCAATGCCAAC +
Preference number: 6 (lower is better)
Translates to: LDSNGLDQSLDQ*FYSKSYLANAN
Trigger: GTTGGCATTGGCCAAATATGATTTTGAGTAAAATCATTGGTCGAGGCTTTGATCGAGGCCATTACTGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619348.4
ENST00000626496.1
CDS CAA 72 bp TGTATTGTTTTTACACATGCTAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGATGCCAGTAACAAATGC +
Preference number: 6 (lower is better)
Translates to: CIVFTHARVDGG*FNVSCDASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAAGCCACCGTCCACTCTAGCATGTGTAAAAACAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619037.1
CDS CCA 72 bp CTCTGTAAGTTTATTTTATCTCTGTCAAGAGATTTCTaGGATGATGGAAATGCTTCCGTCTGTCCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: LCKFILSLSRDF*DDGNASVCPVH
Trigger: ATGGACAGGACAGACGGAAGCATTTCCATCATCCCAGAAATCTCTTGACAGAGATAAAATAAACTTACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557890.1
CDS CCA 72 bp TTATCCAGGATGGTGATGATCTCATCATTGAGAATCTaGAACTTGCGAATTCTCTCCACCATCTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: LSRMVMISSLRI*NLRILSTIFFK
Trigger: TTTGAAGAAGATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGAGATCATCACCATCCTGGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1
CDS CAA 72 bp TGTATTGTTTTTATACATGCTAGAGTGGACGGTGGCTaGTTCAATGTATCTTGCGATGCCAGTAACAAATGC +
Preference number: 6 (lower is better)
Translates to: CIVFIHARVDGG*FNVSCDASNKC
Trigger: GCATTTGTTACTGGCATCGCAAGATACATTGAACAAGCCACCGTCCACTCTAGCATGTATAAAAACAATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627816.1
CDS CCA 72 bp CACCATGTAAAGCTGGATTATCCAAGGAAACATTTGTaGGGGAGAAAATATACATGGTACATTAGTTATGCC +
Preference number: 6 (lower is better)
Translates to: HHVKLDYPRKHL*GRKYTWYISYA
Trigger: GGCATAACTAATGTACCATGTATATTTTCTCCCCCACAAATGTTTCCTTGGATAATCCAGCTTTACATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617556.4
ENST00000625601.2
CDS CAA 72 bp GGAACCACCTGGAGTTGCTTGAAGTACTTGTCGATTTaGGATAAGTTTATTCTTTTCTTGGCATCCAACTTA +
Preference number: 6 (lower is better)
Translates to: GTTWSCLKYLSI*DKFILFLASNL
Trigger: TAAGTTGGATGCCAAGAAAAGAATAAACTTATCCAAAATCGACAAGTACTTCAAGCAACTCCAGGTGGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617928.5
ENST00000625276.2
ENST00000628954.2
ENST00000671714.1
ENST00000672091.1
CDS CAA 90 bp TACTTATCCAGGATGGTGATGATCTCATCATTGAGAATCTGGAACTaGCGAATTCTCTCCACCATCTTCTTCAAAGGCACATTTTTAATA +
Preference number: 6 (lower is better)
Translates to: YLSRMVMISSLRIWN*RILSTIFFKGTFLI
Trigger: TATTAAAAATGTGCCTTTGAAGAAGATGGTGGAGAGAATTCGCAAGTTCCAGATTCTCAATGATGAGATCATCACCATCCTGGATAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000610365.4
ENST00000617556.4
ENST00000617928.5
ENST00000619348.4
ENST00000671714.1
ENST00000672091.1