Pregenerated sensors for CYC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179091Ensembl transcript IDs: ENST00000318911.5, ENST00000525122.1, ENST00000528618.1, ENST00000533444.1
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATGATGGCTCTTGGGCTTaGGGGCCTGTTCTGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GGPRARAWSPAPLPLLPDDGSWA*GPVLAG Trigger: TCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATC...ATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCCTGTTCTGGCAGGATaGCAAGCAGACACTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: GAEGGPRARAWSPAPLPLPVLAG*QADTGQ Trigger: CTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGG...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTGGATGGCTCTTGGGCTaGAGGGCCTGTTCTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GAEGGPRARAWSPAPLPLGWLLG*RACSGR Trigger: CCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCC...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| 3UTR TCA 72 bp | CTGAGGCCTGAACAGGCCTGGGATGGCTCTTGGGCTTaGGGGCCTGTTCTGGCAGGATGGCAAGCAGACACT | + |
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Preference number: 3 (lower is better) Translates to: LRPEQAWDGSWA*GPVLAGWQADT Trigger: AGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCTGTTCAGGCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| 3UTR TCA 72 bp | CTCTTCTTCCAGATGAAGAGAGGCTTAGCTGAGGCCTaGACAGGCCTGGGATGGCTCTTGGGCTTGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LFFQMKRGLAEA*TGLGWLLGLRA Trigger: GGCCCTCAAGCCCAAGAGCCATCCCAGGCCTGTTCAGGCCTCAGCTAAGCCTCTCTTCATCTGGAAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTGAGACCTTCCCGCAGTaGCACCCCGGTGGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GAEGGPRARAWSPAPLPLETFPQ*HPGGWL Trigger: GAGCCACCCACCGGGGTGTCACTGCGGGAAGGTCTC...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCGTCCGTAGCGGGAGCTaGCCGGGACGCGCGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFVRSGS*PGRALH Trigger: GTGCAGCGCGCGTCCCGGGCAGCTCCCGCTACGGAC...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | ATGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCCCCTGCCGCCAGCATaGCCAGCGCTGACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: MGAEGGPRARAWSPAPLPPLPPA*PALTAS Trigger: TGATGCTGTCAGCGCTGGGCATGCTGGCGGCAGGGG...AGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCGCACTCACAGCCGAATaGAGAGCCATGGCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GLKEGPELEPGLLPPCLFALTAE*RAMASP Trigger: GGGGCTGGCCATGGCTCTGCATTCGGCTGTGAGTGC...GAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCGTGCTCTGGCTCAGATaGCCAGCGCAGGAAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLVLWLR*PAQEGA Trigger: TGCACCTTCCTGCGCTGGGCATCTGAGCCAGAGCAC...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTCGATGGTCGTGCTCTaGCTCAGATGCCCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLSMVVL*LRCPAQ Trigger: CTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGA...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCGCTCGCAGTAGCCCGTaGGCAGGGAGAAGACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKEGPELEPGLLPPCLFARSSP*AGRRRS Trigger: ACTACGTCTTCTCCCTGCTCACGGGCTACTGCGAGC...GAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCCTTGGGCGGCCGATATaGCAGCTTCCGACTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLLGRPI*QLPTLQ Trigger: CTGAAGAGTCGGAAGCTGGCATATCGGCCGCCCAAG...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCGCAGCTCCAGGTCACTaGCACTCACAGCCGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLAAPGH*HSQPNA Trigger: TGCATTCGGCTGTGAGTGCCAGTGACCTGGAGCTGC...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGCAGTGACACCCCGGTaGGTGGCTCGCAGTAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLAVTPR*VARSSP Trigger: CGGGCTACTGCGAGCCACCCACCGGGGTGTCACTGC...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTGGACAGGGTCACTTaGGCGGCCGATATGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GAEGGPRARAWSPAPLPLLDRVT*AADMPA Trigger: AGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAG...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGCATGCCCAGCGCTaGCAGCATCACTTTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFQHAQR*QHHFPA Trigger: GGCCGGAAAGTGATGCTGTCAGCGCTGGGCATGCTG...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATTCATTGGGGCCGTCTTaGACCTCCACCTCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPRARAWSPAPLPLLPDSLGPS*TSTSAA Trigger: GGCTGCGGAGGTGGAGGTTCAAGACGGCCCCAATGA...ATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACACCGAATGCAGAGCCATaGCCAGCCCCGCACCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: WLLGLRACSGRMASRHWTPNAEP*PAPHPL Trigger: CAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGG...TGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGCCCAGAGCTAGAGCCTaGTCTCCTGCCCCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RPGMALGLEGLFWQDGKQPRARA*SPAPLP Trigger: AGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGG...CTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCGTTTTCGATGGTCGTaGTCTGGCTCAGATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAEGGPRARAWSPAPLPLRFRWS*SGSDAQ Trigger: CTGGGCATCTGAGCCAGAGCACGACCATCGAAAACG...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATACGAAGTCCATGCTGTaGCAGGAGGCGCACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPRARAWSPAPLPLLPDTKSML*QEAHTC Trigger: GCAGGTGTGCGCCTCCTGCCACAGCATGGACTTCGT...ATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTGGGACATGGTAGCTaGGGTGCCATCGTCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: GAEGGPRARAWSPAPLPLLGHGS*GAIVKL Trigger: GAGTTTGACGATGGCACCCCAGCTACCATGTCCCAG...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCCCCATGCGTTTTCGATaGTCGTGCTCTGGCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLPMRFR*SCSGSD Trigger: ATCTGAGCCAGAGCACGACCATCGAAAACGCATGGG...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | ATGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCCTGTTCTGGCAGGATaGCAAGCAGACACTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: MGAEGGPRARAWSPAPLPPVLAG*QADTGQ Trigger: CTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGG...AGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGCTCGCACGATGTAGCTaGGGTCAGGGGGCAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLLARCS*GQGAML Trigger: GAGCATTGCCCCCTGACCTCAGCTACATCGTGCGAG...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGGGATGGCTCTTGGGCTTaGGGGCCTGTTCTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALGLEGLFWQDGKQTLDRDGSWA*GPVLAG Trigger: TCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATC...CCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGGAGGCCACGAAGTCCATaGTGTGGCAGGAGGCGCACA | + |
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Preference number: 4 (lower is better) Translates to: ALGLEGLFWQDGKQTLDRRPRSP*CGRRRT Trigger: TGTGCGCCTCCTGCCACAGCATGGACTTCGTGGCCT...CCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGAGGTCAGGGGGCAATaGTCCGTTGTTGGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLEVRGQ*SVVGSS Trigger: CGAGCTGCCAACAACGGAGCATTGCCCCCTGACCTC...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCTCCGGATGCTGGTGTaGTCCAAGGAAGAGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFLRMLV*SKEERR Trigger: CCTCCTCTCTTCCTTGGACCACACCAGCATCCGGAG...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTTCTCCCCATCTTCATTaGGGCCGTCTTGAACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GAEGGPRARAWSPAPLPLSPHLH*GRLEPP Trigger: TGGAGGTTCAAGACGGCCCCAATGAAGATGGGGAGA...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCGCAATGCTCCGTTGTTaGCAGCTCGAGCAGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFAMLRC*QLEQPH Trigger: GTGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGC...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | AGGCCTGGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGGCTTCCCTGGCCGCATaGACATCTCCCCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RPGMALGLEGLFWQDGKQASLAA*TSPHLH Trigger: ATGAAGATGGGGAGATGTTCATGCGGCCAGGGAAGC...CTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | AGGCCTGGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGGGTCTCCTGCCCCCTTaGCTCTTCTTCCAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: RPGMALGLEGLFWQDGKQGLLPP*LFFQMK Trigger: CTTCATCTGGAAGAAGAGGCAAGGGGGCAGGAGACC...CTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCAACCCCTCCGGATGCTaGTGTGGTCCAAGGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFNPSGC*CGPRKR Trigger: TCTCTTCCTTGGACCACACCAGCATCCGGAGGGGTT...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCACCTGCTTATATACCTaGAAACCCCTCCGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLKEGPELEPGLLPPCLFTCLYT*KPLRML Trigger: CAGCATCCGGAGGGGTTTCCAGGTATATAAGCAGGT...GAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGTCGAACAGCTTCCCTaGCCGCATGAACATCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLVEQLP*PHEHLP Trigger: GGGGAGATGTTCATGCGGCCAGGGAAGCTGTTCGAC...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGAGGGGCCATGGCAATaGCCTGGCCAGGAAAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: WLLGLRACSGRMASRHWTEGPWQ*PGQESR Trigger: CCTACTTTCCTGGCCAGGCCATTGCCATGGCCCCTC...TGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | ATGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTATTAATTTATTCCCATaGTGGGGGCTGAAGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: MGAEGGPRARAWSPAPLPINLFP*WGLKEG Trigger: GCCCTCCTTCAGCCCCCATCATGGGAATAAATTAAT...AGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATGAACCCAGCGCAGGAAGGTaGACACATCCTTGGCTATCT | + |
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Preference number: 4 (lower is better) Translates to: GPRARAWSPAPLPLLPDEPSAGR*THPWLS Trigger: AGATAGCCAAGGATGTGTGCACCTTCCTGCGCTGGG...TTCATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCAGACATCTGTGTAGATaGGAGGGGCCATGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFRHLCR*EGPWQW Trigger: CCATTGCCATGGCCCCTCCCATCTACACAGATGTCT...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACTTGTGCCGCTTTATaGTGTAGACCAGGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: RPGMALGLEGLFWQDGKQTCAAL*CRPGAP Trigger: TGGTGCCCCTGGTCTACACCATAAAGCGGCACAAGT...CTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | GGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATGAACAGGAAAGTAGGGGTTaGAGTAGAGACCTTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GPRARAWSPAPLPLLPDEQESRG*SRDLPA Trigger: TGCGGGAAGGTCTCTACTTCAACCCCTACTTTCCTG...TTCATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGGCAGGAGGCGCACACCTaGTTATATACCTGGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: ALGLEGLFWQDGKQTLDRQEAHT*LYTWKP Trigger: GGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTG...CCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCGTTGGGGTATGGTTTTaGGAAATAGTCGAACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: WGLKEGPELEPGLLPPCLVGVWF*EIVEQL Trigger: AAGCTGTTCGACTATTTCCCAAAACCATACCCCAAC...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGACATCCTTGGCTATCTaGGACATGGTAGCTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLTSLAI*DMVAGV Trigger: CACCCCAGCTACCATGTCCCAGATAGCCAAGGATGT...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR TCA 90 bp | TGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACACCGACTCTTCAGGACTaGCCACTTGTGCCGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: WLLGLRACSGRMASRHWTPTLQD*PLVPLY Trigger: ATAAAGCGGCACAAGTGGTCAGTCCTGAAGAGTCGG...TGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCGAGCAGCCTCACTGTTaGGGTATGGTTTTGGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKEGPELEPGLLPPCLFFEQPHC*GMVLGN Trigger: ATTTCCCAAAACCATACCCCAACAGTGAGGCTGCTC...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CCA 90 bp | GGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGCTCACTGTTGGGGTATaGTTTTGGGAAATAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMALGLEGLFWQDGKQTLLTVGV*FWEIVE Trigger: TTCGACTATTTCCCAAAACCATACCCCAACAGTGAG...CAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS TCA 90 bp | AGATGCGGGGCCGCGCGGAGGCCGGGGCCCGGCCCAGCGCTCACCTaGGGTGTCCGTAGCGGGAGCTGCCCGGGACGCGCGCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCGAARRPGPGPALT*GVRSGSCPGRALHS Trigger: GCTGTGCAGCGCGCGTCCCGGGCAGCTCCCGCTACGGACACCTCAGGTGAGCGCTGGGCCGGGCCCCGGCCTCCGCGCGGCCCCGCATCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 90 bp | CCCAGCCCCGCCACGGCAGCTAGCCCGTCCCGCCAACCCCCACGCTaGGGACGGGCTCTCTGCCGTTCGGAGAGGTGGGCGCCCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPATAASPSRQPPR*GRALCRSERWAPSP Trigger: AGGGCTGGGCGCCCACCTCTCCGAACGGCAGAGAGCCCGTCCCCAGCGTGGGGGTTGGCGGGACGGGCTAGCTGCCGTGGCGGGGCTGGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 90 bp | TGGGCGCCCAGCCCTGATCCCACACGCTCAAGGTCGGCAGGCAGCTaGGACCGGGGACGCTGGGTGGCCGGTACCGCTTCCGCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WAPSPDPTRSRSAGS*DRGRWVAGTASALP Trigger: GGGCAGCGCGGAAGCGGTACCGGCCACCCAGCGTCCCCGGTCCCAGCTGCCTGCCGACCTTGAGCGTGTGGGATCAGGGCTGGGCGCCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS TCA 90 bp | CTGGGGACGGGCTCTCTGCCGTTCGGAGAGGTGGGCGCCCAGCCCTaGTCCCACACGCTCAAGGTCGGCAGGCAGCTGGGACCGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LGTGSLPFGEVGAQP*SHTLKVGRQLGPGT Trigger: CGTCCCCGGTCCCAGCTGCCTGCCGACCTTGAGCGTGTGGGATCAGGGCTGGGCGCCCACCTCTCCGAACGGCAGAGAGCCCGTCCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS GCA 90 bp | GCAGCTAGCCCGTCCCGCCAACCCCCACGCTGGGGACGGGCTCTCTaGCGTTCGGAGAGGTGGGCGCCCAGCCCTGATCCCACACGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AASPSRQPPRWGRAL*RSERWAPSPDPTRS Trigger: TGAGCGTGTGGGATCAGGGCTGGGCGCCCACCTCTCCGAACGGCAGAGAGCCCGTCCCCAGCGTGGGGGTTGGCGGGACGGGCTAGCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 90 bp | CTGGCCGAGATCAGGCTGGGGTCACTTCAGGACGCGGGCCCAGTTTaGACAGCCAGCCGCAAGAGCCGTCCTGGGCGCGCCATTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LAEIRLGSLQDAGPV*TASRKSRPGRAIRE Trigger: TTCCCGAATGGCGCGCCCAGGACGGCTCTTGCGGCTGGCTGTCCAAACTGGGCCCGCGTCCTGAAGTGACCCCAGCCTGATCTCGGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS-3UTR CAA 90 bp | TGGGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCGGGGGCAATGCTCCGTaGTTGGCAGCTCGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WGLKEGPELEPGLLPPCLGGNAP*LAARAA Trigger: GGCTGCTCGAGCTGCCAACAACGGAGCATTGCCCCC...GAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS GCA 90 bp | TCTGACTCTCAGCGCCCACCTCTCCACCCAGCAATGGCCTCCTCCTaGAGGGCACCAGACGCACACCCTGTCCCACTACCCACCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SDSQRPPLHPAMASS*RAPDAHPVPLPTPS Trigger: GGATGGGGTGGGTAGTGGGACAGGGTGTGCGTCTGGTGCCCTGCAGGAGGAGGCCATTGCTGGGTGGAGAGGTGGGCGCTGAGAGTCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS CCA 90 bp | GTGCTGGGACAGGCCAAGGTCACAAGCAGCTGGCCGAGATCAGGCTaGGGTCACTTCAGGACGCGGGCCCAGTTTGGACAGCCAGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLGQAKVTSSWPRSG*GHFRTRAQFGQPAA Trigger: TGCGGCTGGCTGTCCAAACTGGGCCCGCGTCCTGAAGTGACCCCAGCCTGATCTCGGCCAGCTGCTTGTGACCTTGGCCTGTCCCAGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTACTGGACAGGGTCACTaGGGCGGCCGATATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAEGGPRARAWSPAPLPLTGQGH*GGRYAS Trigger: GCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGT...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCGGATGGCTCTTGGGCTaGAGGGCCTGTTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLKEGPELEPGLLPPCLFGWLLG*RACSGR Trigger: CCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCC...GAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS GCA 90 bp | TTCCGGCCTCGGGAAAGGCCAGACTTCGACGACAAGGCCACTGCCTaGAAGATCTCCGCTCAGCGCCTGCCAGGACACCACCCAGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: FRPRERPDFDDKATA*KISAQRLPGHHPAL Trigger: TAGGGCTGGGTGGTGTCCTGGCAGGCGCTGAGCGGAGATCTTGCAGGCAGTGGCCTTGTCGTCGAAGTCTGGCCTTTCCCGAGGCCGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS GCA 90 bp | CACTTTCCGGCCTCGGGAAAGGCCAGACTTCGACGACAAGGCCACTaGCTGCAAGATCTCCGCTCAGCGCCTGCCAGGACACCACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HFPASGKARLRRQGH*LQDLRSAPARTPPS Trigger: GCTGGGTGGTGTCCTGGCAGGCGCTGAGCGGAGATCTTGCAGGCAGTGGCCTTGTCGTCGAAGTCTGGCCTTTCCCGAGGCCGGAAAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS TCA 90 bp | GGCCTGGCCAGGAAAGTAGGGGTTGAAGTAGAGACCTTCCCGCAGTaGCACCCCGGTGGGTGGCTCGCAGTAGCCCGTGAGCAGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLARKVGVEVETFPQ*HPGGWLAVAREQGE Trigger: TTCTCCCTGCTCACGGGCTACTGCGAGCCACCCACCGGGGTGTCACTGCGGGAAGGTCTCTACTTCAACCCCTACTTTCCTGGCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS-3UTR CAA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCGGCCTGGGATGGCTCTaGGGCTTGAGGGCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKEGPELEPGLLPPCLFFGLGWL*GLRACS Trigger: AGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCC...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS GCA 90 bp | CCGTGTAGCACACGCCCACCAGGTGGCGGTAGGCCACGAAGTCCATaGTGTGGCAGGAGGCGCACACCTGCTTATATACCTGGAAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCSTRPPGGGRPRSP*CGRRRTPAYIPGNP Trigger: GGGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTGCCACAGCATGGACTTCGTGGCCTACCGCCACCTGGTGGGCGTGTGCTACACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 90 bp | CCGTGTAGCACACGCCCACCAGGTGGCGGTAGGCCACGAAGTCCATaGTGTGGCAGGAGGCGCACACCTGCTTATATACCTGGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCSTRPPGGGRPRSP*CGRRRTPAYIPGVV Trigger: GACCACACCAGGTATATAAGCAGGTGTGCGCCTCCTGCCACAGCATGGACTTCGTGGCCTACCGCCACCTGGTGGGCGTGTGCTACACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528618.1 |
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| CDS-3UTR CAA 90 bp | AGGCCTGGGATGGCTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGTTCATTGGGGCCGTCTaGAACCTCCACCTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGMALGLEGLFWQDGKQFIGAV*NLHLRS Trigger: GCTGCGGAGGTGGAGGTTCAAGACGGCCCCAATGAA...CTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATCCCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CAA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCGGCAATGCTCCGTTGTaGGCAGCTCGAGCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKEGPELEPGLLPPCLFFGNAPL*AARAAS Trigger: TGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGCC...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS GCA 90 bp | GCCCGTGTACCTAGCTCGCACGATGTAGCTGAGGTCAGGGGGCAATaGTCCGTTGTTGGCAGCTCGAGCAGCCTCACTGTTGGGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: ARVPSSHDVAEVRGQ*SVVGSSSSLTVGVW Trigger: CCATACCCCAACAGTGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGCCCCCTGACCTCAGCTACATCGTGCGAGCTAGGTACACGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000525122.1 ENST00000528618.1 |
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| CDS-3UTR CAA 90 bp | GGGGCTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCGAGCAGCCTCACTGTaGGGGTATGGTTTTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEGGPRARAWSPAPLPLRAASL*GYGFGK Trigger: TTTCCCAAAACCATACCCCAACAGTGAGGCTGCTCG...AAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS TCA 90 bp | GGGTCACTTGGGCGGCCGATATGCCAGCTTCCGACTCTTCAGGACTaGCCACTTGTGCCGCTTTATGGTGTAGACCAGGGGCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGRPICQLPTLQD*PLVPLYGVDQGHQQ Trigger: CTGCTGGTGCCCCTGGTCTACACCATAAAGCGGCACAAGTGGTCAGTCCTGAAGAGTCGGAAGCTGGCATATCGGCCGCCCAAGTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 90 bp | ACCACCATGCCTAGCTCGCACGATGTAGCTGAGGTCAGGGGGCAATaGTCCGTTGTTGGCAGCTCGAGCAGCCTCACTGTTGGGGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TTMPSSHDVAEVRGQ*SVVGSSSSLTVGVW Trigger: CCATACCCCAACAGTGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGCCCCCTGACCTCAGCTACATCGTGCGAGCTAGGCATGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 90 bp | GGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGGGTCACTTaGGCGGCCGATATGCCAGCTTCCGACTCTTCAGGACTGACCACT | + |
|
Preference number: 5 (lower is better) Translates to: GLFWQDGKQTLDRVT*AADMPASDSSGLTT Trigger: AGTGGTCAGTCCTGAAGAGTCGGAAGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 90 bp | CTCTTGGGCTTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTaGACAGGGTCACTTGGGCGGCCGATATGCCAGCTTCCGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLGLRACSGRMASRH*TGSLGRPICQLPTL Trigger: AAGAGTCGGAAGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 90 bp | CAGGGGGCAATGCTCCGTTGTTGGCAGCTCGAGCAGCCTCACTGTTaGGGTATGGTTTTGGGAAATAGTCGAACAGCTTCCCTGGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGAMLRCWQLEQPHC*GMVLGNSRTASLAA Trigger: TGCGGCCAGGGAAGCTGTTCGACTATTTCCCAAAACCATACCCCAACAGTGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000528618.1 ENST00000533444.1 |
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| CDS GCA 90 bp | CATCTTGAGCCCCATGCGTTTTCGATGGTCGTGCTCTGGCTCAGATaGCCAGCGCAGGAAGGTGCACACATCCTTGGCTATCTGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: HLEPHAFSMVVLWLR*PAQEGAHILGYLGH Trigger: ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGAAAACGCATGGGGCTCAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 90 bp | TACCTTGAGCCCCATGCGTTTTCGATGGTCGTGCTCTGGCTCAGATaGCCAGCGCAGGAAGGTGCACACATCCTTGGCTATCTGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: YLEPHAFSMVVLWLR*PAQEGAHILGYLGH Trigger: ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGAAAACGCATGGGGCTCAAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525122.1 |
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| CDS-3UTR CAA 90 bp | CTGAAGGAGGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCTGTTGGGGTATGGTTTaGGGAAATAGTCGAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKEGPELEPGLLPPCLFFCWGMV*GNSRTA Trigger: AGCTGTTCGACTATTTCCCAAAACCATACCCCAACA...GAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCCTCCTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS-3UTR CAA 90 bp | GGGCCCAGAGCTAGAGCCTGGTCTCCTGCCCCCTTGCCTCTTCTTCCAGATGAAATCATCATCAACATCTaGAGCCCCATGCGTTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GPRARAWSPAPLPLLPDEIIINI*SPMRFR Trigger: TCGAAAACGCATGGGGCTCAAGATGTTGATGATGAT...TTCATCTGGAAGAAGAGGCAAGGGGGCAGGAGACCAGGCTCTAGCTCTGGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318911.5 |
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| CDS CCA 90 bp | ATGCCAGCTTCCGACTCTTCAGGACTGACCACTTGTGCCGCTTTATaGTGTAGACCAGGGGCACCAGCAGAGCCATCATCATCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: MPASDSSGLTTCAAL*CRPGAPAEPSSSTS Trigger: AGATGTTGATGATGATGGCTCTGCTGGTGCCCCTGGTCTACACCATAAAGCGGCACAAGTGGTCAGTCCTGAAGAGTCGGAAGCTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 72 bp | GAGGTGTCCGTAGCGGGAGCTGCCCGGGACGCGCGCTaGACAGCAGACCCCGGGCACGCGCGCCCGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EVSVAGAARDAR*TADPGHARPGA Trigger: GGCTCCCGGGCGCGCGTGCCCGGGGTCTGCTGTGCAGCGCGCGTCCCGGGCAGCTCCCGCTACGGACACCTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 72 bp | CAAGGTCGGCAGGCAGCTGGGACCGGGGACGCTGGGTaGCCGGTACCGCTTCCGCGCTGCCCAGGCCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QGRQAAGTGDAG*PVPLPRCPGPR Trigger: GCGCGGGCCTGGGCAGCGCGGAAGCGGTACCGGCCACCCAGCGTCCCCGGTCCCAGCTGCCTGCCGACCTTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 72 bp | CGCTCAAGGTCGGCAGGCAGCTGGGACCGGGGACGCTaGGTGGCCGGTACCGCTTCCGCGCTGCCCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRSAGSWDRGR*VAGTASALPRP Trigger: GGGCCTGGGCAGCGCGGAAGCGGTACCGGCCACCCAGCGTCCCCGGTCCCAGCTGCCTGCCGACCTTGAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS GCA 72 bp | CCGTCCCGCCAACCCCCACGCTGGGGACGGGCTCTCTaGCGTTCGGAGAGGTGGGCGCCCAGCCCTGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSRQPPRWGRAL*RSERWAPSPDP Trigger: GGGATCAGGGCTGGGCGCCCACCTCTCCGAACGGCAGAGAGCCCGTCCCCAGCGTGGGGGTTGGCGGGACGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 72 bp | GCCACGGCAGCTAGCCCGTCCCGCCAACCCCCACGCTaGGGACGGGCTCTCTGCCGTTCGGAGAGGTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ATAASPSRQPPR*GRALCRSERWA Trigger: CGCCCACCTCTCCGAACGGCAGAGAGCCCGTCCCCAGCGTGGGGGTTGGCGGGACGGGCTAGCTGCCGTGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 72 bp | GGGCCCAGTTTGGACAGCCAGCCGCAAGAGCCGTCCTaGGCGCGCCATTCGGGAAAGCCCCAGCCCCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPSLDSQPQEPS*ARHSGKPQPRH Trigger: GTGGCGGGGCTGGGGCTTTCCCGAATGGCGCGCCCAGGACGGCTCTTGCGGCTGGCTGTCCAAACTGGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CCA 72 bp | AGCCCTGATCCCACACGCTCAAGGTCGGCAGGCAGCTaGGACCGGGGACGCTGGGTGGCCGGTACCGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPDPTRSRSAGS*DRGRWVAGTAS Trigger: GGAAGCGGTACCGGCCACCCAGCGTCCCCGGTCCCAGCTGCCTGCCGACCTTGAGCGTGTGGGATCAGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CAA 90 bp | GCTGGCCGAGATCAGGCTGGGGTCACTTCAGGACGCGGGCCCAGTTaGGACAGCCAGCCGCAAGAGCCGTCCTGGGCGCGCCATTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGRDQAGVTSGRGPS*DSQPQEPSWARHSG Trigger: TCCCGAATGGCGCGCCCAGGACGGCTCTTGCGGCTGGCTGTCCAAACTGGGCCCGCGTCCTGAAGTGACCCCAGCCTGATCTCGGCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS TCA 72 bp | GGCTCTCTGCCGTTCGGAGAGGTGGGCGCCCAGCCCTaGTCCCACACGCTCAAGGTCGGCAGGCAGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLPFGEVGAQP*SHTLKVGRQLG Trigger: TCCCAGCTGCCTGCCGACCTTGAGCGTGTGGGATCAGGGCTGGGCGCCCACCTCTCCGAACGGCAGAGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533444.1 |
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| CDS CAA 72 bp | GATCAGGCTGGGGTCACTTCAGGACGCGGGCCCAGTTaGGACAGCCAGCCGCAAGAGCCGTCCTGGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DQAGVTSGRGPS*DSQPQEPSWAR Trigger: GCGCGCCCAGGACGGCTCTTGCGGCTGGCTGTCCAAACTGGGCCCGCGTCCTGAAGTGACCCCAGCCTGATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS TCA 72 bp | GCAGTGACACCCCGGTGGGTGGCTCGCAGTAGCCCGTaGGCAGGGAGAAGACGTAGTCCTCACCACCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVTPRWVARSSP*AGRRRSPHHHA Trigger: GGCATGGTGGTGAGGACTACGTCTTCTCCCTGCTCACGGGCTACTGCGAGCCACCCACCGGGGTGTCACTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS TCA 72 bp | CCACCCCATCCCTCTCCGCCGCTGACCCCTAGACCGTaGTTCGCTCTCAGGAGAGGGTGTTCCTGGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPHPSPPLTPRP*FALRRGCSWIL Trigger: CAGGATCCAGGAACACCCTCTCCTGAGAGCGAATCACGGTCTAGGGGTCAGCGGCGGAGAGGGATGGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS GCA 72 bp | CGGGAAAGGCCAGACTTCGACGACAAGGCCACTGCCTaGAAGATCTCCGCTCAGCGCCTGCCAGGACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RERPDFDDKATA*KISAQRLPGHH Trigger: GTGGTGTCCTGGCAGGCGCTGAGCGGAGATCTTGCAGGCAGTGGCCTTGTCGTCGAAGTCTGGCCTTTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS GCA 72 bp | GCCTCGGGAAAGGCCAGACTTCGACGACAAGGCCACTaGCTGCAAGATCTCCGCTCAGCGCCTGCCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ASGKARLRRQGH*LQDLRSAPART Trigger: TGTCCTGGCAGGCGCTGAGCGGAGATCTTGCAGGCAGTGGCCTTGTCGTCGAAGTCTGGCCTTTCCCGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS CCA 72 bp | CAGGCCAAGGTCACAAGCAGCTGGCCGAGATCAGGCTaGGGTCACTTCAGGACGCGGGCCCAGTTTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QAKVTSSWPRSG*GHFRTRAQFGQ Trigger: CTGTCCAAACTGGGCCCGCGTCCTGAAGTGACCCCAGCCTGATCTCGGCCAGCTGCTTGTGACCTTGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000528618.1 ENST00000533444.1 |
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| CDS TCA 72 bp | GGGCCATGGCAATGGCCTGGCCAGGAAAGTAGGGGTTaGAGTAGAGACCTTCCCGCAGTGACACCCCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPWQWPGQESRG*SRDLPAVTPRW Trigger: CCACCGGGGTGTCACTGCGGGAAGGTCTCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGCCATGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS CAA 90 bp | GGGCCTGTTCTGGCAGGATGGCAAGCAGACACTGGACAGGGTCACTaGGGCGGCCGATATGCCAGCTTCCGACTCTTCAGGACTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: GPVLAGWQADTGQGH*GGRYASFRLFRTDH Trigger: GTGGTCAGTCCTGAAGAGTCGGAAGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS TCA 72 bp | AGGAAAGTAGGGGTTGAAGTAGAGACCTTCCCGCAGTaGCACCCCGGTGGGTGGCTCGCAGTAGCCCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RKVGVEVETFPQ*HPGGWLAVARE Trigger: CTCACGGGCTACTGCGAGCCACCCACCGGGGTGTCACTGCGGGAAGGTCTCTACTTCAACCCCTACTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS GCA 72 bp | ACACGCCCACCAGGTGGCGGTAGGCCACGAAGTCCATaGTGTGGCAGGAGGCGCACACCTGCTTATATACCT | + |
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Preference number: 6 (lower is better) Translates to: TRPPGGGRPRSP*CGRRRTPAYIP Trigger: AGGTATATAAGCAGGTGTGCGCCTCCTGCCACAGCATGGACTTCGTGGCCTACCGCCACCTGGTGGGCGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000528618.1 ENST00000533444.1 |
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| CDS CAA 72 bp | CTGGCAGGATGGCAAGCAGACACTGGACAGGGTCACTaGGGCGGCCGATATGCCAGCTTCCGACTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LAGWQADTGQGH*GGRYASFRLFR Trigger: CCTGAAGAGTCGGAAGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGTGTCTGCTTGCCATCCTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS TCA 72 bp | GGGCGGCCGATATGCCAGCTTCCGACTCTTCAGGACTaGCCACTTGTGCCGCTTTATGGTGTAGACCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRPICQLPTLQD*PLVPLYGVDQG Trigger: CCCCTGGTCTACACCATAAAGCGGCACAAGTGGTCAGTCCTGAAGAGTCGGAAGCTGGCATATCGGCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 72 bp | GCCACGAAGTCCATGCTGTGGCAGGAGGCGCACACCTaGTTATATACCTGGAAACCCCTCCGGATGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ATKSMLWQEAHT*LYTWKPLRMLV Trigger: CACCAGCATCCGGAGGGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTGCCACAGCATGGACTTCGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 72 bp | CCTAGCTCGCACGATGTAGCTGAGGTCAGGGGGCAATaGTCCGTTGTTGGCAGCTCGAGCAGCCTCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSHDVAEVRGQ*SVVGSSSSLTV Trigger: AACAGTGAGGCTGCTCGAGCTGCCAACAACGGAGCATTGCCCCCTGACCTCAGCTACATCGTGCGAGCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000528618.1 ENST00000533444.1 |
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| CDS CCA 72 bp | TTGAGGGCCTGTTCTGGCAGGATGGCAAGCAGACACTaGACAGGGTCACTTGGGCGGCCGATATGCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRACSGRMASRH*TGSLGRPICQL Trigger: AAGCTGGCATATCGGCCGCCCAAGTGACCCTGTCCAGTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS GCA 72 bp | CCCCATGCGTTTTCGATGGTCGTGCTCTGGCTCAGATaGCCAGCGCAGGAAGGTGCACACATCCTTGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: PHAFSMVVLWLR*PAQEGAHILGY Trigger: ATAGCCAAGGATGTGTGCACCTTCCTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGAAAACGCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS CCA 72 bp | GCCCAGCGCAGGAAGGTGCACACATCCTTGGCTATCTaGGACATGGTAGCTGGGGTGCCATCGTCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: AQRRKVHTSLAI*DMVAGVPSSNS Trigger: AGAGTTTGACGATGGCACCCCAGCTACCATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS GCA 72 bp | ATCAACATCTTGAGCCCCATGCGTTTTCGATGGTCGTaGTCTGGCTCAGATGCCCAGCGCAGGAAGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: INILSPMRFRWS*SGSDAQRRKVH Trigger: GTGCACCTTCCTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGAAAACGCATGGGGCTCAAGATGTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 72 bp | ATGCTGTGGCAGGAGGCGCACACCTGCTTATATACCTaGAAACCCCTCCGGATGCTGGTGTGGTCCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: MLWQEAHTCLYT*KPLRMLVWSKE Trigger: TTCCTTGGACCACACCAGCATCCGGAGGGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTGCCACAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 72 bp | GGGTGCCATCGTCAAACTCTAAGACATCTGTGTAGATaGGAGGGGCCATGGCAATGGCCTGGCCAGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GCHRQTLRHLCR*EGPWQWPGQES Trigger: ACTTTCCTGGCCAGGCCATTGCCATGGCCCCTCCCATCTACACAGATGTCTTAGAGTTTGACGATGGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000533444.1 |
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| CDS CCA 72 bp | TCCGACTCTTCAGGACTGACCACTTGTGCCGCTTTATaGTGTAGACCAGGGGCACCAGCAGAGCCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: SDSSGLTTCAAL*CRPGAPAEPSS Trigger: TGATGATGGCTCTGCTGGTGCCCCTGGTCTACACCATAAAGCGGCACAAGTGGTCAGTCCTGAAGAGTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 72 bp | ATCATCATCAACATCTTGAGCCCCATGCGTTTTCGATaGTCGTGCTCTGGCTCAGATGCCCAGCGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IIINILSPMRFR*SCSGSDAQRRK Trigger: CTTCCTGCGCTGGGCATCTGAGCCAGAGCACGACCATCGAAAACGCATGGGGCTCAAGATGTTGATGATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318911.5 ENST00000533444.1 |
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| CDS CCA 72 bp | ATGCTCCGTTGTTGGCAGCTCGAGCAGCCTCACTGTTaGGGTATGGTTTTGGGAAATAGTCGAACAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: MLRCWQLEQPHC*GMVLGNSRTAS Trigger: GGAAGCTGTTCGACTATTTCCCAAAACCATACCCCAACAGTGAGGCTGCTCGAGCTGCCAACAACGGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000318911.5 ENST00000525122.1 ENST00000528618.1 ENST00000533444.1 |
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