RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYBC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178927

Ensembl transcript IDs: ENST00000306645.10, ENST00000342572.12, ENST00000434650.6, ENST00000437807.6, ENST00000536759.2, ENST00000577436.5, ENST00000577471.5, ENST00000577696.5, ENST00000577707.5, ENST00000577732.5, ENST00000577834.5, ENST00000577888.5, ENST00000578064.1, ENST00000578895.5, ENST00000578913.5, ENST00000578919.5, ENST00000578941.5, ENST00000579444.5, ENST00000579751.5, ENST00000580560.5, ENST00000581196.5, ENST00000582395.5, ENST00000582438.1, ENST00000582456.1, ENST00000582545.2, ENST00000582608.5, ENST00000582725.5, ENST00000583242.1, ENST00000583359.1, ENST00000583617.5, ENST00000583778.1, ENST00000584024.5, ENST00000584408.5, ENST00000584503.5, ENST00000584791.1, ENST00000584891.5, ENST00000585044.5, ENST00000585064.5, ENST00000585080.5, ENST00000585115.1

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAG +
Preference number: 1 (lower is better)
Translates to: ESPAHRPGHQARRAR*TPHLGGPGYTQETK
Trigger: CTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 90 bp GTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGCCCGAGGTCTTGCTGTGGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: VSGTTCSISTHKGPA*PRLSTRPRSCCGPK
Trigger: CTTTGGGCCACAGCAAGACCTCGGGCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
3UTR CCA 90 bp ACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTaGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGT +
Preference number: 1 (lower is better)
Translates to: TGQGIRPGALGAHRT*EDLGTLRRPRALAG
Trigger: ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR GCA 90 bp GGGCGGTGCACGGGCTCAGGCACAGTGGGGCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACTGTCGCTGCTCTGAGACAGCTCTGT +
Preference number: 1 (lower is better)
Translates to: GRCTGSGTVGLSALA*RVTGLTVAALRQLC
Trigger: ACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCACTGTGCCTGAGCCCGTGCACCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
3UTR GCA 90 bp TTGGCGATGGCTTCCACATCACTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACC +
Preference number: 1 (lower is better)
Translates to: LAMASTSLRWPMTAL*VRGWEKPVASRSTT
Trigger: GGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATCGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
3UTR CCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTT +
Preference number: 1 (lower is better)
Translates to: ASGQARSVHTAPGRT*VHSGDQEHWRVRMV
Trigger: AACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 90 bp ACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: TAPGRTWVHSGDQEH*RVRMVGVQLLRGGE
Trigger: CTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 90 bp GCAGTGTGCAAGCAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGTGGGCGGTG +
Preference number: 1 (lower is better)
Translates to: AVCKQQHEQAIGQLG*RHQLKPRPRVLWAV
Trigger: CACCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCACACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
3UTR CCA 90 bp TGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTCC +
Preference number: 1 (lower is better)
Translates to: CEEQRDLSVTTAGAE*SMRRDPGISKGGGS
Trigger: GGACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 90 bp CTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCCGAGAG +
Preference number: 1 (lower is better)
Translates to: LGTLRRPRALAGQDG*RSAPTGWGEVCSRE
Trigger: CTCTCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 90 bp TCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGTCCTACCCAGCCATTCCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: SHLSPVGFHRGHSQT*GKGVPCPTQPFLGL
Trigger: CAGGCCCAGGAATGGCTGGGTAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR TCA 90 bp GGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGT +
Preference number: 1 (lower is better)
Translates to: GYDDPVLQRGTGSHY*GGGSHLSPVGFHRG
Trigger: ACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 90 bp TCCGGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAG +
Preference number: 1 (lower is better)
Translates to: SGCRKAGPGLTMEKV*MSWSGLLFHAVCKQ
Trigger: CTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR TCA 90 bp CAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCA +
Preference number: 1 (lower is better)
Translates to: QLMLKLSVRNRETFL*RPLGQSGLCAEILA
Trigger: TGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR GCA 90 bp GAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTaGAAGCAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: EKVWMSWSGLLFHAV*KQQHEQAIGQLGWR
Trigger: CCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR CCA 90 bp AGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAG +
Preference number: 1 (lower is better)
Translates to: RKAGPGLTMEKVWMS*SGLLFHAVCKQQHE
Trigger: CTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR GCA 90 bp CAGGTGACACGTGAAGGGTTATTTATGGTTATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCCACTACTGAGGAGGAGGGTCCCATC +
Preference number: 1 (lower is better)
Translates to: QVTREGLFMVMMTLS*NEGLAATTEEEGPI
Trigger: GATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAACCCTTCACGTGTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
3UTR-3UTR TCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGACCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 2 (lower is better)
Translates to: AHRPGHQARRARCTPHLGPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp GTCCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 2 (lower is better)
Translates to: VLPSHSWACRLGAHRAQEAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...CTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGAGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: PGHQARRARCTPHLGGPGTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp TGGCCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: WPMTALCVRGWEKPVASRAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGACCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: AHRPGHQARRARCTPHLGPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 2 (lower is better)
Translates to: GPGYTQETKSTGGSGWLAHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...CGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GTCCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 2 (lower is better)
Translates to: VLPSHSWACRLGAHRAQEAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...CTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCCCAGCTCACACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: HSWACRLGAHRAQESPAHTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...GTGAGCTGGGGACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PGHQARRARCTPHLGGPGIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: PGHQARRARCTPHLGGPGAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACAACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 2 (lower is better)
Translates to: QESPAHRPGHQARRARCTTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GTCCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 2 (lower is better)
Translates to: VLPSHSWACRLGAHRAQEGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...CTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACAGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 2 (lower is better)
Translates to: QESPAHRPGHQARRARCTGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 2 (lower is better)
Translates to: LGQSGLCAEILASAREAGAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 2 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 2 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 2 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR GCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACATGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: QESPAHRPGHQARRARCTCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: QARRARCTPHLGGPGYTQTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: LGQSGLCAEILASAREAGTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR TCA 90 bp CACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTAGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 2 (lower is better)
Translates to: HSGDQEHWRVRMVGVQLLAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...TAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PGHQARRARCTPHLGGPGPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: GPGYTQETKSTGGSGWLAAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...CGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGATTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 2 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: PGHQARRARCTPHLGGPGRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 2 (lower is better)
Translates to: LGQSGLCAEILASAREAGVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGCTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR GCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 2 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584024.5
3UTR-3UTR CCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp ACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: TRERTLCRGQHAASAPTRPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 2 (lower is better)
Translates to: GPGYTQETKSTGGSGWLAFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...CGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp CTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: LSAFTEVTARRGAKVFPVTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...GACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: AHRPGHQARRARCTPHLGRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 2 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 2 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 2 (lower is better)
Translates to: PGYTQETKSTGGSGWLAFGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...GAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCCTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 2 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RRPRALAGQDGWRSAPTGIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GTTATTTATGGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 2 (lower is better)
Translates to: VIYGYDDPVLQRGTGSHYHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...GTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 2 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 2 (lower is better)
Translates to: LGQSGLCAEILASAREAGGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: PTQPFLGLPPRGSQGPGVRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...GACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: PGYTQETKSTGGSGWLAFTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...GAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 2 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp ACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 2 (lower is better)
Translates to: TRERTLCRGQHAASAPTRVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...CCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR TCA 90 bp TCCTCCTCCACGCTCACATCACGGACATCATGGAGCAGGACCACCACCTGGTCGCAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SSSTLTSRTSWSRTTTWSQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...CGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
3UTR-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp ACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: TRERTLCRGQHAASAPTRIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...CCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAACTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 2 (lower is better)
Translates to: RALAGQDGWRSAPTGWGELDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp GCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: ARRKPEHHHVAFPEVPDLCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...AAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
3UTR-3UTR GCA 90 bp CTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LSAFTEVTARRGAKVFPVWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...GACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp GTTATTTATGGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VIYGYDDPVLQRGTGSHYGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...GTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp TCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: SGDQEHWRVRMVGVQLLRTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: LGQSGLCAEILASAREAGPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 2 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PARSSQVRERLELNFCRKTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp CCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: PPARSSQVRERLELNFCRAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...TCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR GCA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 2 (lower is better)
Translates to: VFPGSREAGTQFLQKISQTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: VFPGSREAGTQFLQKISQAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CCA 90 bp GGAAATAAAGAGTGGAAGCTGCAGGTGACACGTGAAGGGTTATTTATGGTTATGCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: GNKEWKLQVTREGLFMVMQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...CATAACCATAAATAACCCTTCACGTGTCACCTGCAGCTTCCACTCTTTATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
3UTR-3UTR GCA 90 bp GGAAATAAAGAGTGGAAGCTGCAGGTGACACGTGAAGGGTTATTTATGGTTATGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 2 (lower is better)
Translates to: GNKEWKLQVTREGLFMVMVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CATAACCATAAATAACCCTTCACGTGTCACCTGCAGCTTCCACTCTTTATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
3UTR GCA 72 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGACCTGGGTACACTCAG +
Preference number: 3 (lower is better)
Translates to: AHRPGHQARRAR*TPHLGGPGYTQ
Trigger: CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 72 bp GACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGGGTCCTCGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: DRWGRVVYAPRS*HQQGRRVLGEG
Trigger: CCCCTCCCCGAGGACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CAA 90 bp CCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: PTQPFLGLPPRGSQGPGVHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...GACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR GCA 72 bp GTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATaGAGCATCAGCACCCACAAGGGCCCGGCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: VHQGEDAVSGTT*SISTHKGPAWP
Trigger: GGGCCAGGCCGGGCCCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
3UTR CCA 72 bp CAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAAGAGCACTGGCGGGTC +
Preference number: 3 (lower is better)
Translates to: QARSVHTAPGRT*VHSGDQEHWRV
Trigger: GACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 72 bp CTGCGGTGGCCCATGACTGCACTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATG +
Preference number: 3 (lower is better)
Translates to: LRWPMTALCVRG*EKPVASRSTTM
Trigger: CATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
3UTR GCA 72 bp GGCGATGGCTTCCACATCACTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGC +
Preference number: 3 (lower is better)
Translates to: GDGFHITAVAHD*TLREGVGEARR
Trigger: GCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
3UTR CCA 72 bp TCACCCCTCACTGCCCTTGGGGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGG +
Preference number: 3 (lower is better)
Translates to: SPLTALGEAPDR*GCPPGRGRCVG
Trigger: CCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 72 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGAGAGCCCAGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: AGQDGWRSAPTG*GEVCSREPSPL
Trigger: GAGGGGGCTGGGCTCTCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 72 bp GGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTaGGAGGACCTGGGTACACTCAGGAGACCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: GIRPGALGAHRT*EDLGTLRRPRA
Trigger: TGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 3 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR-3UTR CAA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
3UTR TCA 72 bp TGGCTTGCAGGGTCACCGGCCTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTCTCAAGGCAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: WLAGSPASLSLL*DSSVGLSRQCS
Trigger: GCTGCACTGCCTTGAGAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CAA 90 bp CACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: HWRVRMVGVQLLRGGEKSHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...AGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACCACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 3 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 3 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 3 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR-3UTR CAA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 3 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 72 bp GGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGG +
Preference number: 3 (lower is better)
Translates to: GRTWVHSGDQEH*RVRMVGVQLLR
Trigger: CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CCA 72 bp AAGCAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: KQQHEQAIGQLG*RHQLKPRPRVL
Trigger: CAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
3UTR CCA 72 bp CTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: LRRPRALAGQDG*RSAPTGWGEVC
Trigger: ACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 72 bp ACCTTCTCCTCCTCCACGCTCACATCACGGACATCATaGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: TFSSSTLTSRTS*SRTTTWSWPAL
Trigger: CAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
3UTR CCA 72 bp CAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: QRDLSVTTAGAE*SMRRDPGISKG
Trigger: TCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 72 bp TACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: YTQETKSTGGSG*LAFSSYGVGRS
Trigger: ACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
3UTR CCA 72 bp GGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAG +
Preference number: 3 (lower is better)
Translates to: GPGLTMEKVWMS*SGLLFHAVCKQ
Trigger: CTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR-3UTR CAA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 3 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
3UTR CCA 72 bp AGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTG +
Preference number: 3 (lower is better)
Translates to: RKAGPGLTMEKV*MSWSGLLFHAV
Trigger: CACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR CCA 72 bp AGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: RPHDGESLDVLV*PAVSCSVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATCGTGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
3UTR GCA 72 bp CGTGAAGGGTTATTTATGGTTATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCCACTACTGAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: REGLFMVMMTLS*NEGLAATTEEE
Trigger: CTCCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAACCCTTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGHQARRARCTPHLGGPGAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...CCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: AHRPGHQARRARCTPHLGGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QARRARCTPHLGGPGYTQAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGAGCCATTCCTGGGCCTaGCGCCTAGGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: QARRARCTPHLGGPGYTQSHSWA*RLGAHR
Trigger: CCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCT...CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: QARRARCTPHLGGPGYTQWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGGTGCGGGTCTCCACCTaGAGGTACATCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRVRVST*RYIPRG
Trigger: CCCTCTCGGGATGTACCTGCAGGTGGAGACCCGCAC...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DCTLREGVGEARRKPEHHAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...GTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp ACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLREGVGEARRKPEHHHVARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...TACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGDGGGS*CGSPPA
Trigger: TGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATC...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGCAGCATCAGCACCCACAAGGGCCCGGCCTGGCCCCGCCTCTCCACTCGCCCGAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: CSISTHKGPAWPRLSTRPSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...CGGGCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTGGGTGCTGATGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSAGVQG*RDLRLR
Trigger: CCGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582438.1
CDS-3UTR TCA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACCCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCCCAGCTCACGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HSWACRLGAHRAQESPAHGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...GTGAGCTGGGGACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACAACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QESPAHRPGHQARRARCTTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: TRERTLCRGQHAASAPTRHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...CCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAACACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCCCAGCTCACTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HSWACRLGAHRAQESPAHYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...GTGAGCTGGGGACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PTQPFLGLPPRGSQGPGVYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...GACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: TALCVRGWEKPVASRSTTAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...GGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACGGTGCACACCGCACCTaGGAGGACCTGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: DCTLREGVGEARRKPEHHGAHRT*EDLGTL
Trigger: GAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACC...GTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584024.5
3UTR CAA 72 bp CACGGGCTCAGGCACAGTGGGGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCACTGTCGCTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HGLRHSGAVSSG*QGHRPHCRCSE
Trigger: CTCAGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCACTGTGCCTGAGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp CCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PMTALCVRGWEKPVASRSSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...GCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTCCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: LGQSGLCAEILASAREAGPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp GCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGACCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: ALGAHRTWEDLGTLRRPRPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...TCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp TGTGGCTGCAGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCCCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: CGCSVHSQVGPGCSPLTAPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...GGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCTGCAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGTGGGCGGTGGTGCGGGTCTCCACCTaGAGGTACATCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QLGWRHQLKPRPRVLWAVVRVST*RYIPRG
Trigger: CCCTCTCGGGATGTACCTGCAGGTGGAGACCCGCAC...CACCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp ACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TAGDVHQGEDAVSGTTCSAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...GCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: DCTLREGVGEARRKPEHHRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...GTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: PMTALCVRGWEKPVASRSLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...GCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHMMTLS*NEGLAA
Trigger: GGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCAT...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACCCGCCGGGGCCAACCTaGAGCGGAACAGGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYPPGPT*SGTGAR
Trigger: CCTCGCGCCTGTTCCGCTGCAGGTTGGCCCCGGCGG...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTCACAGCGACACCGACTaGGCGGGGGCTGTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPHSDTD*AGAVSR
Trigger: GCGGGAAACAGCCCCCGCGCAGTCGGTGTCGCTGTG...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577436.5
CDS-3UTR CCA 90 bp TGTGGCTGCAGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: CGCSVHSQVGPGCSPLTADGGGS*CGSPPA
Trigger: TGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATC...GGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCTGCAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: TKSTGGSGWLAFSSYGVGWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...CCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GEAPDRWGCPPGRGRCVGPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCACACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: QQHEQAIGQLGWRHQLKPHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGGCCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: WPMTALCVRGWEKPVASRQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACATTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: QESPAHRPGHQARRARCTFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCCCAGCTCACGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: HSWACRLGAHRAQESPAHAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...GTGAGCTGGGGACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCTACCCAGCCATTCCTaGGCCTGCCGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGLPSHS*ACRLGA
Trigger: AGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAG...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGCTACCCAGCCATTCCTaGGCCTGCCGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSLPSHS*ACRLGA
Trigger: AGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAG...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: AGDVHQGEDAVSGTTCSIAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...GATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp GTCCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: VLPSHSWACRLGAHRAQEVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...CTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTGTGCGGGTCTCCACCTaGAGGTACATCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGVRVST*RYIPRG
Trigger: CCCTCTCGGGATGTACCTGCAGGTGGAGACCCGCAC...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR GCA 90 bp CCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PEHHHVAFPEVPDLLLLHGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...GTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTAGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSGDQEHWRVRMVGVQLLARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...TAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGATGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AHRPGHQARRARCTPHLGCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
CDS-3UTR CCA 90 bp GCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: ARRKPEHHHVAFPEVPDLLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...AAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTALCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: LREGVGEARRKPEHHHVAFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...GGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCAGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAAAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTCTACCCAGCCATTCCTaGGCCTGCCGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HWRVRMVGVQLLRGGEKSLPSHS*ACRLGA
Trigger: AGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAG...AGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp TCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: STRERTLCRGQHAASAPTAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...TGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGCCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCACCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: LGMSTRERTLCRGQHAASPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...TGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCCCTTGGGGAAGCACCTaGCCGCTGGGGATGTCCACC +
Preference number: 4 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSPWGST*PLGMST
Trigger: GGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGG...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGTGSHY*GGGSHL
Trigger: GAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGT...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GTCCTACCCAGCCATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLPSHSWACRLGAHRAQEQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...CTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
CDS-3UTR GCA 90 bp CAGGAGTCCCCAGCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QESPAHRPGHQARRARCTQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...TGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGCTGGGGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
CDS-3UTR GCA 90 bp CACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HQGEDAVSGTTCSISTHKAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp TGTGGCTGCAGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCCGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGCSVHSQVGPGCSPLTARPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...GGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCTGCAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QARRARCTPHLGGPGYTQCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...CTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAERQAQASRWRKSGCPGGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...ACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LGQSGLCAEILASAREAGTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp AGTGGGGCTGTCAGCTCTGGCTTGCAGGGTCACCGGCCTCACTGTCGCTGCTCTACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SGAVSSGLQGHRPHCRCSTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...AGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSDGGGS*CGSPPA
Trigger: TGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATC...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PEHHHVAFPEVPDLLLLHDGGGS*CGSPPA
Trigger: TGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATC...GTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp CTCACATCACGGACATCATGGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTGGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LTSRTSWSRTTTWSWPALGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...CAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGDQEHWRVRMVGVQLLRLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CTCACATCACGGACATCATGGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTGCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: LTSRTSWSRTTTWSWPALLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...CAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR CCA 90 bp CTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: LSAFTEVTARRGAKVFPVLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...GACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: GAPPCSLSRSTGPSPPPRWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...GCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGCGGTGGCCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LRWPMTALCVRGWEKPVAAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...TGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp ACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TAGDVHQGEDAVSGTTCSQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...GCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCAACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAATAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: ASGQARSVHTAPGRTWVHGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...GTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGGTGCACACCGCACCTaGGAGGACCTGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPGAHRT*EDLGTL
Trigger: GAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACC...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCCTACCCAGCCATTCCTaGGCCTGCCGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GYTQETKSTGGSGWLAFSLPSHS*ACRLGA
Trigger: AGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAG...GCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGQSGLCAEILASAREAGPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAACAGGAGGAGGGGTCTaGTCTCTGTGGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: TLREGVGEARRKPEHHHVTGGGV*SLWLGT
Trigger: CGTGCCCAACCACAGAGACCAGACCCCTCCTCCTGT...TACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS-3UTR CCA 90 bp GGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCACGGGTCCTGCGGTaGCCCATGACTGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: GMSTRERTLCRGQHAASAPRVLR*PMTALC
Trigger: GCAGAGTGCAGTCATGGGCCACCGCAGGACCCGTGG...TGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583617.5
CDS-3UTR TCA 90 bp GTGCAGCTCCAGGAAGCTGGTGATGAGCTTGGCGATGGCTTCCACATCACTGCGGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: VQLQEAGDELGDGFHITAAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...CGCAGTGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTTCCTGGAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp ACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TKSTGGSGWLAFSSYGVGRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...CCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QETKSTGGSGWLAFSSYGGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KPEHHHVAFPEVPDLLLLAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...GAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAACGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGERPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCCGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: AGNRPTRLEAPTEAKATGLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...ACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGATGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGATGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCACTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAALPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGAAGCCATTCCTGGGCCTaGCGCCTAGGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRSHSWA*RLGAHR
Trigger: CCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCT...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPDGGGS*CGSPPA
Trigger: TGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATC...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VAFPEVPDLLLLHAHITDGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...GTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp CCTTCTCCTCCTCCACGCTCACATCACGGACATCATGGAGCAGGACCACCACCTGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PSPPPRSHHGHHGAGPPPGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...AGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp GCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: AGDVHQGEDAVSGTTCSIPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...GATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DCTLREGVGEARRKPEHHCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...GTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: AAERQAQASRWRKSGCPGWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...ACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGAACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECEEQRDLSVTTAGAEWSAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...AGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGCAGGACCACCACCTGGTCGTGGCCAGCTCTGAAAAGAGTCAGCAGCTTCTTGCAGGAGTCCAGGGCTaGCGAGACCTCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQDHHLVVASSEKSQQLLAGVQG*RDLRLQ
Trigger: CTGCAGCCGGAGGTCTCGCCAGCCCTGGACTCCTGC...AAGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR CCA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGEAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCCTTGGGGAAACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SVHSQVGPGCSPLTALGETTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...TTCCCCAAGGGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: GYTQETKSTGGSGWLAFSAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...GCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QETKSTGGSGWLAFSSYGGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: TAGDVHQGEDAVSGTTCSAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...GCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGTGCACACCGCACCTaGGAGGACCTGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVGAHRT*EDLGTL
Trigger: GAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACC...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGCACACCGCACCTaGGAGGACCTGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: SGDQEHWRVRMVGVQLLRGAHRT*EDLGTL
Trigger: GAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACC...CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGACTACCCAGCCATTCCTaGGCCTGCCGCCTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRLPSHS*ACRLGA
Trigger: AGCCCCTAGGCGGCAGGCCCAGGAATGGCTGGGTAG...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAGCGCACTTCCGGGATTaGAGCGGAGCCGAGCCGACT +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPAHFRD*SGAEPT
Trigger: AGTCGGCTCGGCTCCGCTCCAATCCCGGAAGTGCGC...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434650.6
CDS-3UTR CCA 90 bp GCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCAGGTTGGGCACGTCACTaGATCCCCCAGAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: AGAPPCSLSRSTGPSPPPGWARH*IPQRPR
Trigger: ACGGGGTCTCTGGGGGATCCAGTGACGTGCCCAACC...TGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS-3UTR CCA 90 bp ACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGGGGGTCTGGTCTCTGTaGTTGGGCACGTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TKSTGGSGWLAFSSYGVGGVWSL*LGTSLD
Trigger: ATCCAGTGACGTGCCCAACCACAGAGACCAGACCCC...CCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGT
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS-3UTR CCA 90 bp ACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGGGGTCTGGTCTCTGTaGTTGGGCACGTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TLREGVGEARRKPEHHHVGVWSL*LGTSLD
Trigger: ATCCAGTGACGTGCCCAACCACAGAGACCAGACCCC...TACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCCAGCCTTACCTGCGGTaGCCCATGACTGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAQPYLR*PMTALC
Trigger: GCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTG...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp CACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTAGACCTCCGGCTGCGGTaGCCCATGACTGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: HSGDQEHWRVRMVGVQLLDLRLR*PMTALC
Trigger: GCAGAGTGCAGTCATGGGCCACCGCAGCCGGAGGTC...TAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582438.1
CDS-3UTR TCA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVGEARRKPEHHHVAFPEGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...TTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR TCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RPLGQSGLCAEILASAREVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: GVGEARRKPEHHHVAFPEVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...TTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSTGSHY*GGGSHL
Trigger: GAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGT...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGAGTGCGGGTCTCCACCTaGAGGTACATCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRVRVST*RYIPRG
Trigger: CCCTCTCGGGATGTACCTGCAGGTGGAGACCCGCAC...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GTGCAGCTCCAGGAAGCTGGTGATGAGCTTGGCGATGGCTTCCACATCACTGCGGTGCGGGTCTCCACCTaGAGGTACATCCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQLQEAGDELGDGFHITAVRVST*RYIPRG
Trigger: CCCTCTCGGGATGTACCTGCAGGTGGAGACCCGCAC...CGCAGTGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTTCCTGGAGCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VGEARRKPEHHHVAFPEVGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...TACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR GCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISAAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSAFTEVTARRGAKVFPVRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...GACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp ACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: TRERTLCRGQHAASAPTRLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...CCTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAACTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGTGGGCGGTGTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLGWRHQLKPRPRVLWAVWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...CACCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGTGGGCGGTGTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QLGWRHQLKPRPRVLWAVCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...CACCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGGCGAGACCTCCGGCTaGAGAAAGGCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSGETSG*RKAGPG
Trigger: GCCTGGGCCTGCCTTTCTGCAGCCGGAGGTCTCGCC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp ACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: TKSTGGSGWLAFSSYGVGVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: RPLGQSGLCAEILASAREVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTCTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGCTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RRPRALAGQDGWRSAPTGLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp GGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GPGYTQETKSTGGSGWLAGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...CGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGACCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AHRPGHQARRARCTPHLGPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAGCCATTCCTGGGCCTaGCGCCTAGGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: PSCQVFPGSREAGTQFLQSHSWA*RLGAHR
Trigger: CCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCT...CTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGEMMTLS*NEGLAA
Trigger: GGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCAT...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTTAGAEWSMRRDPGISKMMTLS*NEGLAA
Trigger: GGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCAT...CTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTAGCTGCATCACCACCTaGCCCGTCCTGTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPSCITT*PVLSGN
Trigger: GTTTCCAGACAGGACGGGGCAGGTGGTGATGCAGCT...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577436.5
CDS-3UTR GCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCGTGACCTGCTACGGCTaGAGCTCCGGCCAGATCAAA +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAVTCYG*SSGQIK
Trigger: TTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCAC...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: VGEARRKPEHHHVAFPEVPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...TACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PSQAGAPPCSLSRSTGPSPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...AGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
CDS-3UTR CCA 90 bp TGTGGCTGCAGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: CGCSVHSQVGPGCSPLTATTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...GGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCTGCAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGCTGTCAGCTCTGGCTTGCAGGGTCACCGGCCTCACTGTCGCTGCTCTGAGAACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GLSALACRVTGLTVAALRTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...TCTCAGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: VTTAGAEWSMRRDPGISKSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...CTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTASRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp AGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SPSQAGAPPCSLSRSTGPSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...AGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCACTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISALCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGTGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAATGGGGCTGTCAGCTCTaGCTTGCAGGGTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQWGCQL*LAGSPA
Trigger: GGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCA...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp ACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TAGDVHQGEDAVSGTTCSIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...GCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCAATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAAIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RPLGQSGLCAEILASAREIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGCGGGTATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGQSGLCAEILASAREAGIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...ACCCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: EGVGEARRKPEHHHVAFPLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...GGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCAGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAAAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HQGEDAVSGTTCSISTHKPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GAPPCSLSRSTGPSPPPRPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...GCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGMSTRERTLCRGQHAASEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...TGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACCAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAACAGCCAGGTAGGCCCTaGATGTTCACCCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQQPGRP*MFTPHC
Trigger: GCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTG...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LSAFTEVTARRGAKVFPVAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...GACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: PGYTQETKSTGGSGWLAFTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...GAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: HWRVRMVGVQLLRGGEKSFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...AGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: VTTAGAEWSMRRDPGISKFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...CTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: QETKSTGGSGWLAFSSYGSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGAGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGETGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: RRPRALAGQDGWRSAPTGTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCGGAGACCAAGAGCACTaGCGGGTCAGGATGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ERPFCDDRWGRVVYAPRSGDQEH*RVRMVG
Trigger: GCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCC...GGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTGGTGCACACCGCACCTaGGAGGACCTGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: AAERQAQASRWRKSGCPGGAHRT*EDLGTL
Trigger: GAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACC...ACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGDVHQGEDAVSGTTCSIGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...GATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGTGCTCTTGTCGAAGATaGCTTCCGAGAGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: RPLGQSGLCAEILASARECSCRR*LPRAQR
Trigger: CCGCTGTGCTCTCGGAAGCCATCTTCGACAAGAGCA...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342572.12
CDS-3UTR CCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTGGTTGGGCACGTCACTaGATCCCCCAGAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPGWARH*IPQRPR
Trigger: ACGGGGTCTCTGGGGGATCCAGTGACGTGCCCAACC...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS-3UTR CCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTTCTGGTCTCTGTGGTTaGGCACGTCACTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPSGLCG*ARHWIP
Trigger: GGGGATCCAGTGACGTGCCCAACCACAGAGACCAGA...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS-3UTR CCA 90 bp GCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTTCTGGTCTCTGTGGTTaGGCACGTCACTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: ARRKPEHHHVAFPEVPDLSGLCG*ARHWIP
Trigger: GGGGATCCAGTGACGTGCCCAACCACAGAGACCAGA...AAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS-3UTR CCA 90 bp TCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAACAGGAGGAGGGGTCTaGTCTCTGTGGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: STRERTLCRGQHAASAPTTGGGV*SLWLGT
Trigger: CGTGCCCAACCACAGAGACCAGACCCCTCCTCCTGT...TGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437807.6
3UTR CAA 72 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGW*AFSSYGVGRSL
Trigger: CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp GCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCCAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGDVHQGEDAVSGTTCSIQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...GATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
CDS-3UTR TCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGEQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
CDS-3UTR TCA 90 bp GAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EARRKPEHHHVAFPEVPDQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...GTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584408.5
CDS-3UTR TCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR TCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GTGATGAGCTTGGCGATGGCTTCCACATCACTGCGGTGGCCCATGACTGCACTCTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VMSLAMASTSLRWPMTALSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...GAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATCGCCAAGCTCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp GGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GYTQETKSTGGSGWLAFSRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...GCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp TCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SQAGAPPCSLSRSTGPSPTGSHY*GGGSHL
Trigger: GAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGT...AGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR GCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPARSSQVRERLELNFCRAVAHD*TLREGV
Trigger: CACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGC...TCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCACGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QQHEQAIGQLGWRHQLKPRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACATCCGGCCTCACTGTCGCTaGTCTGAGACAGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFPEVPDLLLLHAHITDIRPHCR*SETALW
Trigger: CCACAGAGCTGTCTCAGAGCAGCGACAGTGAGGCCG...GATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR GCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPLSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GTGCAGCTCCAGGAAGCTGGTGATGAGCTTGGCGATGGCTTCCACATCACTGCGCTGTCAGCTCTGGCTTaGAGGGTCACCGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: VQLQEAGDELGDGFHITALSALA*RVTGLT
Trigger: AGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAG...CGCAGTGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTTCCTGGAGCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AGTGGGGCTGTCAGCTCTGGCTTGCAGGGTCACCGGCCTCACTGTCGCTGCTCTTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGAVSSGLQGHRPHCRCSWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...AGAGCAGCGACAGTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: GPGYTQETKSTGGSGWLAVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCAGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GMSTRERTLCRGQHAASAGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...TGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RPGALGAHRTWEDLGTLRPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...CCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSGALFR*RRELVR
Trigger: CCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGNRPTRLEAPTEAKATGTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...ACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTATTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RRRVPSLSCRLSPRSQPDSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...GTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AGCGTGCACAGCCAGGTAGGCCCTGGATGTTCACCCCTCACTGCCCTTGGGGAAATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVHSQVGPGCSPLTALGEIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...TTCCCCAAGGGCAGTGAGGGGTGAACATCCAGGGCCTACCTGGCTGTGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGNRPTRLEAPTEAKATGIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...ACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: RPLGQSGLCAEILASARELDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCAACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLGMSTRERTLCRGQHAATMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: HWRVRMVGVQLLRGGEKSAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...AGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGCACAAGGGCCCGGCCTaGCCCCGCCTCTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: VFPGSREAGTQFLQKISQHKGPA*PRLSTR
Trigger: GCGAGTGGAGAGGCGGGGCCAGGCCGGGCCCTTGTG...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCAGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: APPCSLSRSTGPSPPPRSEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...TGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCATCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: GMSTRERTLCRGQHAASASAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...TGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCACTGGCGGGTCAGGATaGTTGGCGTTCAGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GAPPCSLSRSTGPSPPPRTGGSG*LAFSSY
Trigger: GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT...GCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGGCACCTGGGAGGACCTaGGTACACTCAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWAPGRT*VHSGDQ
Trigger: TTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGC...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAGGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HQGEDAVSGTTCSISTHKGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TGGCAGCCACTACTGAGGAGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: WQPLLRRRVPSLSCRLSPGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...CGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGATGAGCTTGGCGATGGCTTCCACATCACTGCGGTGGCCCATGACTGCACTCCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VMSLAMASTSLRWPMTALPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...GAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATCGCCAAGCTCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAACAGGAGGAGGGGTCTaGTCTCTGTGGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPTGGGV*SLWLGT
Trigger: CGTGCCCAACCACAGAGACCAGACCCCTCCTCCTGT...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS-3UTR TCA 90 bp AGGAGGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRVPSLSCRLSPRSQPDVGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...CACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGMSTRERTLCRGQHAASGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...TGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp ACGCTCACATCACGGACATCATGGAGCAGGACCACCACCTGGTCGTGGCCAGCTGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TLTSRTSWSRTTTWSWPAGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...AGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR TCA 90 bp CTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: LGMSTRERTLCRGQHAASVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...TGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp TCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: STRERTLCRGQHAASAPTVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...TGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR TCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQTGSHY*GGGSHL
Trigger: GAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGT...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGGCTGCAGGTGACACGTaGAGGGTTATTTATGGTTAT +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGAAGDT*RVIYGY
Trigger: ATAACCATAAATAACCCTTCACGTGTCACCTGCAGC...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
CDS-3UTR GCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
CDS-3UTR GCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR GCA 90 bp GGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GKHLTAGDVHQGEDAVSGKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...CCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGNRPTRLEAPTEAKATGWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...ACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTAGCTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGQDGWRSAPTGWGEVCSWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...GCTACAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACACTCGCCCGAGGTCTTaGTGTGGCCCAAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PCSLSRSTGPSPPPRSHHTRPRS*CGPKQE
Trigger: CTCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGT...GTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGACTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTACTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GGCATGAACCACTGCGCCCGGCTGGAGCTCCCGGTTTTTAAGCACTGCACGATAGGGCAGAGTGGTCTATaGGCCGAGATCCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GMNHCARLELPVFKHCTIGQSGL*AEILAS
Trigger: TGATGCCAGGATCTCGGCGCATAGACCACTCTGCCC...TATCGTGCAGTGCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGTTCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCGCCAGGCGCGCTCGGTaGACACCGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVFPGSREAGTQFLQKISARRAR*TPHLGG
Trigger: TCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGC...GGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp TCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCAAAGGTGTTCCCTGTCCTAATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAFTEVTARRGAKVFPVLMMTLS*NEGLAA
Trigger: GGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCAT...TAGGACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAACTCACGAGCTACAGCTaGATCACCACCTGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQLTSYS*ITTCPV
Trigger: GACGGGGCAGGTGGTGATGCAGCTGTAGCTCGTGAG...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577436.5
CDS-3UTR CCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISAPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAATGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RALAGQDGWRSAPTGWGECSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
CDS-3UTR CCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTACSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SQAGAPPCSLSRSTGPSPSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...AGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR CCA 90 bp GGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCAATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GMSTRERTLCRGQHAASAIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...TGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: QETKSTGGSGWLAFSSYGLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISAEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ECEEQRDLSVTTAGAEWSEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...AGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISAAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGTATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PSCQVFPGSREAGTQFLQYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...CTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCATTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: QQHEQAIGQLGWRHQLKPFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGGTTGGGCACGTCACTaGATCCCCCAGAGACCCCGT +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSGWARH*IPQRPR
Trigger: ACGGGGTCTCTGGGGGATCCAGTGACGTGCCCAACC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS-3UTR TCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
CDS-3UTR TCA 90 bp CACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTAGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSGDQEHWRVRMVGVQLLGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...TAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QQHEQAIGQLGWRHQLKPGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp TCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTGGTCGTGGCCAGCTCTaGAAAGAGTCAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQAGAPPCSLSRSTGPSPGRGQL*KESAAS
Trigger: AGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACC...AGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582725.5
ENST00000584024.5
ENST00000584408.5
CDS-3UTR TCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR TCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: PARSSQVRERLELNFCRKAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTGTGGGCGGTGGCTGCAGGTGACACGTaGAGGGTTATTTATGGTTAT +
Preference number: 4 (lower is better)
Translates to: QLGWRHQLKPRPRVLWAVAAGDT*RVIYGY
Trigger: ATAACCATAAATAACCCTTCACGTGTCACCTGCAGC...CACCGCCCACAGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
CDS-3UTR TCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTAGTGGAAGCTGCAGGTaGCACGTGAAGGGTTATTTA +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGSGSCR*HVKGYL
Trigger: TAAATAACCCTTCACGTGTCACCTGCAGCTTCCACT...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
CDS-3UTR GCA 90 bp CAGGACCACCACCTGGTCGTGGCCAGCTCTGAAAAGAGTCAGCAGCTTCTTGTAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QDHHLVVASSEKSQQLLVGTRTG*LEPSSD
Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCC...TACAAGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR GCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
CDS-3UTR GCA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSVTTAGAEWSMRRDPGIWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...GATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTGTGTCGGGGACAACATaGAGCATCAGCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: AAERQAQASRWRKSGCPGVSGTT*SISTHK
Trigger: CTTGTGGGTGCTGATGCTGCATGTTGTCCCCGACAC...ACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR GCA 90 bp TCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGGAGCGGGAAGGAAGTaGGGAGCCCACCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGLTAYAEAECEEQRDLSGAGRK*GAHPAQ
Trigger: CTGGGCTGGGTGGGCTCCGCACTTCCTTCCCGCTCC...AGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS-3UTR CCA 90 bp CACCACCTGGTCGTGGCCAGCTCTGAAAAGAGTCAGCAGCTTCTTGTAGAGGCTCCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: HHLVVASSEKSQQLLVEAPGPDA*SPLQME
Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGG...AGCCTCTACAAGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp TCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACATGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: STRERTLCRGQHAASAPTCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...TGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
CDS-3UTR CCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGAACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGCAGCTCCAGGAAGCTGGTGATGAGCTTGGCGATGGCTTCCACATCACTGCGACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VQLQEAGDELGDGFHITATTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...CGCAGTGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTTCCTGGAGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACATAGGCCAACTCGGCTaGAGGCACCAACTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VAFPEVPDLLLLHAHITDIGQLG*RHQLKP
Trigger: TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTAT...GTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGTGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: AAERQAQASRWRKSGCPGAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...ACCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGATATGCGCCGAGATCCTaGCATCAGCAAGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPARSSQVRERLELNFCRYAPRS*HQQGRR
Trigger: CCGCCTCCCTTGCTGATGCCAGGATCTCGGCGCATA...TCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: PPARSSQVRERLELNFCRTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...TCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: GYTQETKSTGGSGWLAFSGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...GCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGTCTGGTCTCTGTGGTTaGGCACGTCACTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRSGLCG*ARHWIP
Trigger: GGGGATCCAGTGACGTGCCCAACCACAGAGACCAGA...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS-3UTR TCA 90 bp TCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGCTGGAGGCACCAACTaGAGCCAAGGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGLTAYAEAECEEQRDLSAGGTN*SQGHGS
Trigger: GGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGC...AGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: PGLACCFMQCASSSMSRQVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp GAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTTGGCCTGCTGTTTCATaGAGTGTGCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EHHHVAFPEVPDLLLLHAWPAVS*SVQAAA
Trigger: TGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCA...AGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp AGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RDLSVTTAGAEWSMRRDPCPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTTGTCCTGGTCTGGCCTaGTGTTTCATGCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EHHHVAFPEVPDLLLLHACPGLA*CFMQCA
Trigger: TGCACACTGCATGAAACAGCAGGCCAGACCAGGACA...AGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CACCGCACCTGGGAGGACCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HRTWEDLGTLRRPRALAGPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...ACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp GTTATTTATGGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACAGCCATTCCTGGGCCTaGCGCCTAGGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: VIYGYDDPVLQRGTGSHYSHSWA*RLGAHR
Trigger: CCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCT...GTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQAGAPPCSLSRSTGPSPCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...AGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp AGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACATCATGGAGCAGGAACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: STGPSPPPRSHHGHHGAGTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...TCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGCTCTGCGTGAGGGGGTaGGAGAAGCCCGTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: VFPGSREAGTQFLQKISQLCVRG*EKPVAS
Trigger: GCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAG...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: TQETKSTGGSGWLAFSSYLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...GTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGCAGCATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCACTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: QQHEQAIGQLGWRHQLKPLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...TGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCATGAACCACTGCGCCCGGCTGGAGCTCCCGGTTTTTAAGCACTGCACGATAACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GMNHCARLELPVFKHCTITMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...TATCGTGCAGTGCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGTTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTGCAGCTCCAGGAAGCTGGTGATGAGCTTGGCGATGGCTTCCACATCACTGCGACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VQLQEAGDELGDGFHITATMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...CGCAGTGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTTCCTGGAGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTGCCCAGGCCTCACGATaGAGAAAGTCTGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: ECEEQRDLSVTTAGAEWSAQASR*RKSGCP
Trigger: AGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGC...AGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PRALAGQDGWRSAPTGWGRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...TCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGGGGTCTGGTCTCTGTaGTTGGGCACGTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSGVWSL*LGTSLD
Trigger: ATCCAGTGACGTGCCCAACCACAGAGACCAGACCCC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS-3UTR TCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCCAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSQTGSL*RRRASS
Trigger: GCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTG...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
CDS-3UTR TCA 90 bp CCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: PPARSSQVRERLELNFCRVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...TCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCGTGCAAGCAGCAGCATaGGCAGGCAATAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSVQAAA*AGNRPT
Trigger: AGTTGGCCTATTGCCTGCTCATGCTGCTGCTTGCAC...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PCSLSRSTGPSPPPRSHHQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...GTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584408.5
CDS-3UTR GCA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTAKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR GCA 90 bp TTTCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTAGCCATTCCTGGGCCTaGCGCCTAGGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: FLASQLMLKLSVRNRETFSHSWA*RLGAHR
Trigger: CCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATGGCT...AAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGTGCTCTTGTCGAAGATaGCTTCCTCCCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRCSCRR*LPPSPP
Trigger: TGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCA...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
CDS-3UTR CCA 90 bp TCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCCACAAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: STRERTLCRGQHAASAPTKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...TGTGGGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp GGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCTGGAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GCRKAGPGLTMEKVWMSWKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...CCAGGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGACGATGGAGAAAGTCTaGATGTCCTGGTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSCQVFPGSREAGTQFLQTMEKV*MSWSGL
Trigger: CAGGCCAGACCAGGACATCCAGACTTTCTCCATCGT...CTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAGCAGCTTCCACAGTGTaGCTGCAGCGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PARSSQVRERLELNFCRKAASTV*LQRAQP
Trigger: TGGCTGTGCACGCTGCAGCCACACTGTGGAAGCTGC...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAACCACTGCGCCCGGCTaGAGCTCCCGGTTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: PARSSQVRERLELNFCRKTTAPG*SSRFLS
Trigger: GCTTAAAAACCGGGAGCTCCAGCCGGGCGCAGTGGT...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp ACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCGGGTCAGGATGGTTaGCGTTCAGCTCCTACGGGG +
Preference number: 4 (lower is better)
Translates to: TAYAEAECEEQRDLSVTTAGQDG*RSAPTG
Trigger: CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGC...GGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGTCACTGTCGCTGCTCTaGGACAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VFPGSREAGTQFLQKISQSLSLL*DSSVGL
Trigger: GAGCCCCACAGAGCTGTCTCAGAGCAGCGACAGTGA...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR TCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAAGAGAGACCTTTCTGTaGCGACCGCTGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PARSSQVRERLELNFCRKRETFL*RPLGQS
Trigger: ACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCT...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp GACCACCACCTGGTCGTGGCCAGCTCTGAAAAGAGTCAGCAGCTTCTTGTAGAGCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: DHHLVVASSEKSQQLLVEQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...CTCTACAAGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR GCA 90 bp GGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GYTQETKSTGGSGWLAFSKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...GCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp TCCACGCTCACATCACGGACATCATGGAGCAGGACCACCACCTGGTCGTGGCCAAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: STLTSRTSWSRTTTWSWPKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...TGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584408.5
CDS-3UTR CCA 90 bp ACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGAAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TERPFCDDRWGRVVYAPRKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...TCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGCCCGAGGTCTTGCTGTaGCCCAAAGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VFPGSREAGTQFLQKISQPEVLL*PKAGVQ
Trigger: CTGGACTCCTGCTTTGGGCCACAGCAAGACCTCGGG...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCGAAGCACCTGACCGCTaGGGATGTCCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QVFPGSREAGTQFLQKISEAPDR*GCPPGR
Trigger: TCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC...GGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGMSTRERTLCRGQHAASRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...TGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGDQEHWRVRMVGVQLLRRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...CCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR TCA 90 bp CCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAGTGGAAGCTGCAGGTaGCACGTGAAGGGTTATTTA +
Preference number: 4 (lower is better)
Translates to: PSCQVFPGSREAGTQFLQSGSCR*HVKGYL
Trigger: TAAATAACCCTTCACGTGTCACCTGCAGCTTCCACT...CTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
CDS-3UTR GCA 90 bp CATGAGCAGGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCAAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: HEQAIGQLGWRHQLKPRPKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...TGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCCTGCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR GCA 90 bp CAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCTTCCACAGTGTGGCTaGAGCGTGCACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QVFPGSREAGTQFLQKISLPQCG*SVHSQV
Trigger: TACCTGGCTGTGCACGCTGCAGCCACACTGTGGAAG...GGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp ACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLRRPRALAGQDGWRSAPPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...AGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: CPGLACCFMQCASSSMSRKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...CCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATCAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HHVAFPEVPDLLLLHAHIKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...GATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp TTTCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTACCGCTGGGGCAGAGTaGTCTATGCGCCGAGATCCT +
Preference number: 4 (lower is better)
Translates to: FLASQLMLKLSVRNRETFTAGAE*SMRRDP
Trigger: AGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGT...AAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCTCAGCTCCTACGGGGTaGGGAGAAGTCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: QVFPGSREAGTQFLQKISSAPTG*GEVCSR
Trigger: TCGGCTACAGACTTCTCCCCACCCCGTAGGAGCTGA...GGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCGGTCACAGCCAGACGTaGGGCAAAGGTGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QVFPGSREAGTQFLQKISGHSQT*GKGVPC
Trigger: ACAGGGAACACCTTTGCCCCACGTCTGGCTGTGACC...GGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp TTTCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCCTGCAACGAGGGACTaGCAGCCACTACTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLASQLMLKLSVRNRETFPATRD*QPLLRR
Trigger: CCTCCTCAGTAGTGGCTGCCAGTCCCTCGTTGCAGG...AAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp CTTCAAAACAACCTTCCCTGTGCTCTTGTCGAAGATGGCTTCCTCCCAGTCCTCCAGTCCTCCAAGTTCTaGACAGCCACAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQNNLPCALVEDGFLPVLQSSKF*TATNRQ
Trigger: CTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTG...GAGGACTGGGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR GCA 90 bp TTTCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTATGATGACCCTGTCCTaGAACGAGGGACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FLASQLMLKLSVRNRETFMMTLS*NEGLAA
Trigger: GGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCAT...AAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp ACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCACCACCACCTGGTCGTaGCCAGCTCTGAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TAYAEAECEEQRDLSVTTTTTWS*PALKRV
Trigger: GACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGT...GGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp CTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGTTAGCAGGACCACCACCTaGTCGTGGCCAGCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LPRFERGWNSISAENLPVSRTTT*SWPALK
Trigger: TTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCT...AACTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KSGCPGLACCFMQCASSSKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGTTTTCTGTGACGACCGCTaGGGCAGAGTGGTCTATGCG +
Preference number: 4 (lower is better)
Translates to: LPRFERGWNSISAENLPVFCDDR*GRVVYA
Trigger: CGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAA...AACTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAGGCCTCCGAAAGTGCTaGGATTACTGGCATGAACCA +
Preference number: 4 (lower is better)
Translates to: PARSSQVRERLELNFCRKGLRKC*DYWHEP
Trigger: TGGTTCATGCCAGTAATCCCAGCACTTTCGGAGGCC...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CCCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PLLPGLPRFERGWNSISARFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...TGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp TCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: SGLTAYAEAECEEQRDLSLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...AGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTTATTTATGGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACCTGGATGTCCTGGTCTaGCCTGCTGTTTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: VIYGYDDPVLQRGTGSHYLDVLV*PAVSCS
Trigger: ACTGCATGAAACAGCAGGCCAGACCAGGACATCCAG...GTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
3UTR CAA 72 bp AGGCTGAACGTCTTCAAAACAACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCCCAGTCCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RLNVFKTTFPVL*SKMASSQSSKF
Trigger: GAACTTGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR TCA 90 bp GGAAATAAAGAGTGGAAGCTGCAGGTGACACGTGAAGGGTTATTTATGGTTATGACTGGCAGCCACTACTaGGGAGGAGGGTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GNKEWKLQVTREGLFMVMTGSHY*GGGSHL
Trigger: GAGATGGGACCCTCCTCCTCAGTAGTGGCTGCCAGT...CATAACCATAAATAACCCTTCACGTGTCACCTGCAGCTTCCACTCTTTATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306645.10
ENST00000342572.12
CDS-3UTR GCA 90 bp GATGGAGAAAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DGESLDVLVWPAVSCSVQKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...TTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTTTCTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CCA 90 bp CTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGTTAAAGTCTGGATGTCCTaGTCTGGCCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPRFERGWNSISAENLPVKVWMS*SGLLFH
Trigger: ATGAAACAGCAGGCCAGACCAGGACATCCAGACTTT...AACTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CCA 90 bp GTTATTTATGGTTATGATGACCCTGTCCTGCAACGAGGGACTGGCAGCCACTACAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VIYGYDDPVLQRGTGSHYRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...GTAGTGGCTGCCAGTCCCTCGTTGCAGGACAGGGTCATCATAACCATAAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR GCA 90 bp TTTCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCCGGTTTTTAAGCACTaGACGATACTAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLASQLMLKLSVRNRETFPVFKH*TILEEL
Trigger: CAGCTCTTCTAGTATCGTGCAGTGCTTAAAAACCGG...AAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CCA 90 bp CTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGTTAGGTTCGAGAGAGGCTaGAACTCAATTTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LPRFERGWNSISAENLPVRFERG*NSISAE
Trigger: TTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCT...AACTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR GCA 90 bp AAGAGTCAGCAGCTTCTTGTAGAGGCTGAACGTCTTCAAAACAACCTTCCCTGTAAACAACCTTCCCTGTaGTCTTGTCGAAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: KSQQLLVEAERLQNNLPCKQPSL*SCRRWL
Trigger: AAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTT...ACAGGGAAGGTTGTTTTGAAGACGTTCAGCCTCTACAAGAAGCTGCTGACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS GCA 90 bp GTTTCTTTGTCCGGATCGGGGGCGCTCCCGCCGCCGGGGCCAACCTaGAGCGGAACAGGCGCGAGGCCGCCCGCGACGGGCACGGCGGGA +
Preference number: 5 (lower is better)
Translates to: VSLSGSGALPPPGPT*SGTGARPPATGTAG
Trigger: TCCCGCCGTGCCCGTCGCGGGCGGCCTCGCGCCTGTTCCGCTGCAGGTTGGCCCCGGCGGCGGGAGCGCCCCCGATCCGGACAAAGAAAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000437807.6
ENST00000582456.1
ENST00000585064.5
CDS CCA 90 bp GGACGTGCCCGCGGTGCAGGCTGGCGGGTCACATGCACAGCCCGCTaGTTCTCCTGGGAGTGCCGACTGCGGGGACCCGCTCAGCGCGAG +
Preference number: 5 (lower is better)
Translates to: GRARGAGWRVTCTAR*FSWECRLRGPAQRE
Trigger: CTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp TCTGGGTGGGAAGGACGTGCCCGCGGTGCAGGCTGGCGGGTCACATaGACAGCCCGCTGGTTCTCCTGGGAGTGCCGACTGCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: SGWEGRARGAGWRVT*TARWFSWECRLRGP
Trigger: GGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCCTTCCCACCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp CGCGGTGCAGGCTGGCGGGTCACATGCACAGCCCGCTGGTTCTCCTaGGAGTGCCGACTGCGGGGACCCGCTCAGCGCGAGGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: RGAGWRVTCTARWFS*ECRLRGPAQREAIF
Trigger: AAAGATGGCCTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS-3UTR CAA 90 bp GCTCACAGGCCAGGGCATCAGGCCAGGCGCGCTCGGTGCACACCGCACCTGGGACACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: AHRPGHQARRARCTPHLGHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...TCCCAGGTGCGGTGTGCACCGAGCGCGCCTGGCCTGATGCCCTGGCCTGTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS GCA 90 bp CACTGCGGGGAGACGGTCAGTGGCCGAGCCATCCCCGCCCACACATaGTGCCCGGCAGTCGCACCAGCGCCACTGGCATCATCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: HCGETVSGRAIPAHT*CPAVAPAPLASSKA
Trigger: CGCTTTCGATGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGGCGGGGATGGCTCGGCCACTGACCGTCTCCCCGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp AGTGCAGGGTCCTCTGGGTGGGAAGGACGTGCCCGCGGTGCAGGCTaGCGGGTCACATGCACAGCCCGCTGGTTCTCCTGGGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: SAGSSGWEGRARGAG*RVTCTARWFSWECR
Trigger: TCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCCTTCCCACCCAGAGGACCCTGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp GCAGGCTGGCGGGTCACATGCACAGCCCGCTGGTTCTCCTGGGAGTaGCGACTGCGGGGACCCGCTCAGCGCGAGGCCATCTTTACACTG +
Preference number: 5 (lower is better)
Translates to: AGWRVTCTARWFSWE*RLRGPAQREAIFTL
Trigger: CAGTGTAAAGATGGCCTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp TGCGGGGAGACGGTCAGTGGCCGAGCCATCCCCGCCCACACATGCTaGCCGGCAGTCGCACCAGCGCCACTGGCATCATCGAAAGCGACA +
Preference number: 5 (lower is better)
Translates to: CGETVSGRAIPAHTC*PAVAPAPLASSKAT
Trigger: TGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGGCGGGGATGGCTCGGCCACTGACCGTCTCCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp ATGTCCACCAGGGAGAGGACGCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACC +
Preference number: 5 (lower is better)
Translates to: MSTRERTLRWPMTAL*VRGWEKPVASRSTT
Trigger: GGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGCGTCCTCTCCCTGGTGGACAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579751.5
CDS-3UTR CAA 90 bp CATTCCTGGGCCTGCCGCCTAGGGGCTCACAGGGCCCAGGAGTCCCCAGCTCACCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HSWACRLGAHRAQESPAHHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...GTGAGCTGGGGACTCCTGGGCCCTGTGAGCCCCTAGGCGGCAGGCCCAGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTAGCCGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: LREGVGEARRKPEHHHVAGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...GGCTACATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS-3UTR CAA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCCGCGCACTTCCGGGATaGGAGCGGAGCCGAGCCGAC +
Preference number: 5 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGRALPG*ERSRAD
Trigger: GTCGGCTCGGCTCCGCTCCAATCCCGGAAGTGCGCG...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434650.6
CDS TCA 90 bp GGCAGGTGGGGCGCACAGGGCCTCTGCCCGTCTGGGCAGGCCCAGTaGTTGTGGCAGGGTGGGAAGTACACCTCATCCCACAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GRWGAQGLCPSGQAQ*LWQGGKYTSSHSWI
Trigger: GATCCAGCTGTGGGATGAGGTGTACTTCCCACCCTGCCACAATCACTGGGCCTGCCCAGACGGGCAGAGGCCCTGTGCGCCCCACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS CCA 90 bp CCAACCAGCAGGGACCAGGACCGGATGCCTGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGGGTCTCCACCTGCAGGTACATCCCG +
Preference number: 5 (lower is better)
Translates to: PTSRDQDRMPGALFR*RRELVRVSTCRYIP
Trigger: CGGGATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000582725.5
ENST00000583617.5
ENST00000583778.1
ENST00000584024.5
ENST00000585044.5
ENST00000585064.5
ENST00000585080.5
CDS CCA 90 bp CTTGGGCCTGCACACAGGCAGGCGCCCACGCCATCAGGCCCAGTCTaGAGGCCAAGAGCAGGTCCCCCAACTAAGTCACCTGCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LGPAHRQAPTPSGPV*RPRAGPPTKSPAAP
Trigger: TGGGGCTGCAGGTGACTTAGTTGGGGGACCTGCTCTTGGCCTCCAGACTGGGCCTGATGGCGTGGGCGCCTGCCTGTGTGCAGGCCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS CCA 90 bp CTACAGGAGGAGGGGTCTGGGAACAGACAGAGGCAGCTGAGCCCTTaGGCCTGCACACAGGCAGGCGCCCACGCCATCAGGCCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LQEEGSGNRQRQLSP*ACTQAGAHAIRPSL
Trigger: CAGACTGGGCCTGATGGCGTGGGCGCCTGCCTGTGTGCAGGCCCAAGGGCTCAGCTGCCTCTGTCTGTTCCCAGACCCCTCCTCCTGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS-3UTR CAA 90 bp GGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GEAPDRWGCPPGRGRCVGHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...CCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000583617.5
ENST00000584024.5
CDS-3UTR CAA 90 bp GCCCTTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTCACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: ALGEAPDRWGCPPGRGRCHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...ACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp GCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: APDRWGCPPGRGRCVGDNGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...GTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS GCA 90 bp GGCGGGTCACATGCACAGCCCGCTGGTTCTCCTGGGAGTGCCGACTaGGGGGACCCGCTCAGCGCGAGGCCATCTTTACACTGCACTGTT +
Preference number: 5 (lower is better)
Translates to: GGSHAQPAGSPGSAD*GDPLSARPSLHCTV
Trigger: AACAGTGCAGTGTAAAGATGGCCTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp CTCCTCCACGCTCACATCACGGACATCATGGAGCAGGACCACCACTaGGGGGAGACGGTCAGTGGCCGAGCCATCCCCGCCCACACATGC +
Preference number: 5 (lower is better)
Translates to: LLHAHITDIMEQDHH*GETVSGRAIPAHTC
Trigger: GCATGTGTGGGCGGGGATGGCTCGGCCACTGACCGTCTCCCCGCAGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp CGGCCAGATCAAAGTCCCACAGCCTTACCTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RPDQSPTALPAVAHD*TLREGVGEARRKPE
Trigger: CTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGGGACTTTGATCTGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS CCA 90 bp TCAACCAGCAGGGACCAGGACCGGATGCCTGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGGGTCTCCACCTGCAGGTACATCCCG +
Preference number: 5 (lower is better)
Translates to: STSRDQDRMPGALFR*RRELVRVSTCRYIP
Trigger: CGGGATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS CCA 90 bp CTTCCAGCCCAGGCTATCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCGGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LPAQAINQQGPGPDA*SPLQMEAGAGAGLH
Trigger: GTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGATAGCCTGGGCTGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS CCA 90 bp GGCAACTCAGGGCAGCCACCTCTTCGGGTACTGGGGCGGTCCCAATaGCTGTCAGAAAACGGCACAGCTGCCTCCCACAGCCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GNSGQPPLRVLGRSQ*LSENGTAASHSPGQ
Trigger: CTGGCCTGGGCTGTGGGAGGCAGCTGTGCCGTTTTCTGACAGCCATTGGGACCGCCCCAGTACCCGAAGAGGTGGCTGCCCTGAGTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp GGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCTTACCTGCGGTaGCCCATGACTGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: GCSSGQIKVPQPYLR*PMTALCVRGWEKPV
Trigger: GACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS CCA 90 bp GACGTGGAGAGCCTTACCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCGGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: DVESLTNQQGPGPDA*SPLQMEAGAGAGLH
Trigger: GTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGTAAGGCTCTCCACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583778.1
ENST00000585044.5
CDS CCA 90 bp GCACGGGCGCAGCAGCCCTGCCACTTCACCGTACGCTCCCAACACTaGCCCCAGGGACCCCGTTCTGGTAGTTTCTCAGGGCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: ARAQQPCHFTVRSQH*PQGPRSGSFSGLSL
Trigger: CAGGGAAAGCCCTGAGAAACTACCAGAACGGGGTCCCTGGGGCCAGTGTTGGGAGCGTACGGTGAAGTGGCAGGGCTGCTGCGCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS CCA 90 bp GATTCCAGCAGGGACCAGGACCGGATGCCTGGAGCCCTCTTCAGATaGAGGCGGGAGCTGGTGCGGGTCTCCACCTGCAGGTACATCCCG +
Preference number: 5 (lower is better)
Translates to: DSSRDQDRMPGALFR*RRELVRVSTCRYIP
Trigger: CGGGATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583359.1
ENST00000584408.5
CDS CCA 90 bp GCACGGGCGCAGCAGCCCTGCCACTTCACCGTACGCTCCCAACACTaGCCCCAGGGACCCCGTTCTGGTAGTTTCTCAGGGCTTTCCCGA +
Preference number: 5 (lower is better)
Translates to: ARAQQPCHFTVRSQH*PQGPRSGSFSGLSR
Trigger: TCGGGAAAGCCCTGAGAAACTACCAGAACGGGGTCCCTGGGGCCAGTGTTGGGAGCGTACGGTGAAGTGGCAGGGCTGCTGCGCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000583242.1
ENST00000583359.1
CDS-3UTR CAA 90 bp GGGTCCCATCTCTCTCCTGTCGGCTTTCACCGAGGTCACAGCCAGACGTGGGGCGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: GSHLSPVGFHRGHSQTWGAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...GCCCCACGTCTGGCTGTGACCTCGGTGAAAGCCGACAGGAGAGAGATGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCACACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: PLGMSTRERTLCRGQHAAHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...TGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGCACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp CGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAAGGGAGGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: RPLGQSGLCAEILASAREGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...CTCCCTTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp CCAGGCGCGCTCGGTGCACACCGCACCTGGGAGGACCTGGGTACACTCAGGAGAGTCTGGTCTCTGTGGTaGGGCACGTCACTGGATCCC +
Preference number: 5 (lower is better)
Translates to: PGALGAHRTWEDLGTLRRVWSLW*GTSLDP
Trigger: GGGATCCAGTGACGTGCCCAACCACAGAGACCAGAC...TCTCCTGAGTGTACCCAGGTCCTCCCAGGTGCGGTGTGCACCGAGCGCGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS GCA 90 bp CCCAAAGCCACAGGTGACCTGGGGCCAATGCCCTGGCCAGGTCCCTaGAGGGATCCAGGAAGCAGCCTGTCAGAAGTGCAGCATTGCGGC +
Preference number: 5 (lower is better)
Translates to: PKATGDLGPMPWPGP*RDPGSSLSEVQHCG
Trigger: GCCGCAATGCTGCACTTCTGACAGGCTGCTTCCTGGATCCCTGCAGGGACCTGGCCAGGGCATTGGCCCCAGGTCACCTGTGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 90 bp ATCAAAGTCCCACAGCCTTACCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACC +
Preference number: 5 (lower is better)
Translates to: IKVPQPYLRWPMTAL*VRGWEKPVASRSTT
Trigger: GGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGGGACTTTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS CCA 90 bp CCAGGCCAATCGACAAGATTCCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCGGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: PGQSTRFQQGPGPDA*SPLQMEAGAGAGLH
Trigger: GTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGAATCTTGTCGATTGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583359.1
ENST00000584408.5
CDS-3UTR CAA 90 bp GCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: ARRKPEHHHVAFPEVPDLAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...AAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp TGCACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGGAGCACCACCATGTCTGGTCTCTGTGGTaGGGCACGTCACTGGATCCC +
Preference number: 5 (lower is better)
Translates to: CTLREGVGEARRKPEHHHVWSLW*GTSLDP
Trigger: GGGATCCAGTGACGTGCCCAACCACAGAGACCAGAC...ATGGTGGTGCTCCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS TCA 90 bp TCCTCTCCCAGCTGCCCCATAGCTCTGGGCAGTCAGGAACGGGAGTaGCCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: SSPSCPIALGSQERE*PATAAAPARSKSHS
Trigger: GCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGAGCTATGGGGCAGCTGGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS GCA 90 bp CCCCATAGCTCTGGGCAGTCAGGAACGGGAGTGACCTGCTACGGCTaGAGCTCCGGCCAGATCAAAGTCCCACAGCCTTACCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: PHSSGQSGTGVTCYG*SSGQIKVPQPYLRW
Trigger: CCACCGCAGGTAAGGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGAGCTATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS CCA 90 bp GCCAATCGACAAGATTCCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCGGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ANRQDSNQQGPGPDA*SPLQMEAGAGAGLH
Trigger: GTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGAATCTTGTCGATTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000583617.5
ENST00000584024.5
ENST00000585064.5
ENST00000585080.5
CDS CCA 90 bp CTGCAGTTTCCCGTGGCAACTCAGGGCAGCCACCTCTTCGGGTACTaGGGCGGTCCCAATGGCTGTCAGAAAACGGCACAGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LQFPVATQGSHLFGY*GGPNGCQKTAQLPP
Trigger: GGGAGGCAGCTGTGCCGTTTTCTGACAGCCATTGGGACCGCCCCAGTACCCGAAGAGGTGGCTGCCCTGAGTTGCCACGGGAAACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp CCATCCCCGCCCACACATGCTGCCCGGCAGTCGCACCAGCGCCACTaGCATCATCGAAAGCGACAGCCACACTTGGTTGGCAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: PSPPTHAARQSHQRH*HHRKRQPHLVGSKS
Trigger: GCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGGCGGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS-3UTR CAA 90 bp CTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: LSVTTAGAEWSMRRDPGIAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...GATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp AGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAACACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RALAGQDGWRSAPTGWGEHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...TTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp AGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RRPRALAGQDGWRSAPTGHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...CCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp ACTGGCGGGTCAGGATGGTTGGCGTTCAGCTCCTACGGGGTGGGGAGAAGTCTGCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TGGSGWLAFSSYGVGRSLHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...CAGACTTCTCCCCACCCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp GGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: GMSTRERTLCRGQHAASAHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...TGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp TGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCAGCAACACCCCTCACTGCCCTaGGGGAAGCACCTGACCGCT +
Preference number: 5 (lower is better)
Translates to: CDDRWGRVVYAPRSWHQQHPSLP*GKHLTA
Trigger: AGCGGTCAGGTGCTTCCCCAAGGGCAGTGAGGGGTG...TTGCTGATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp CCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: PGYTQETKSTGGSGWLAFGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...GAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS TCA 90 bp CCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCGAGAGCACAGCGGTCCCC +
Preference number: 5 (lower is better)
Translates to: PPSPPSSAQPQTGSL*RRRASSPGESTAVP
Trigger: GGGGACCGCTGTGCTCTCGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580560.5
CDS GCA 90 bp TCCCAGCTGCCCCATAGCTCTGGGCAGTCAGGAACGGGAGTGACCTaGTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: SQLPHSSGQSGTGVT*YGCSSGQIKVPQPY
Trigger: GTAAGGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGAGCTATGGGGCAGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS CCA 90 bp AAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACATCATaGAGCAGGACCACCACTGCGGGGAGACGGTCAGTGGCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: KYRTFSSSTLTSRTS*SRTTTAGRRSVAEP
Trigger: TGGCTCGGCCACTGACCGTCTCCCCGCAGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS-3UTR CAA 90 bp TCCGGCTGCAGAAAGGCAGGCCCAGGCCTCACGATGGAGAAAGTCTGGATGTCCCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SGCRKAGPGLTMEKVWMSHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...GGACATCCAGACTTTCTCCATCGTGAGGCCTGGGCCTGCCTTTCTGCAGCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582725.5
ENST00000583617.5
ENST00000584024.5
CDS TCA 90 bp AAACCTCTAAAGAACCCAGGAGGCTCTAGGACCCTGCTGAGCAGGTaGGCAGGTGGGGCGTATCCGTGGGATCCTGCTTCCAGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: KPLKNPGGSRTLLSR*AGGAYPWDPASSGQ
Trigger: CTGCCCGCTGGAAGCAGGATCCCACGGATACGCCCCACCTGCTCACCTGCTCAGCAGGGTCCTAGAGCCTCCTGGGTTCTTTAGAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578064.1
ENST00000578941.5
ENST00000582395.5
ENST00000582608.5
CDS CCA 90 bp AAGTACCGGACCTTCTCCTCCTCCACGCTCACATCACGGACATCATaGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTCCCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: KYRTFSSSTLTSRTS*SRTTTWSWPALPVL
Trigger: GAGGACTGGGAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS-3UTR CAA 90 bp GAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: EAPDRWGCPPGRGRCVGDKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...GTCCCCGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CCCTCCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: PSCQVFPGSREAGTQFLQAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...CTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: PGLACCFMQCASSSMSRQAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp ATCATGGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTGAAAAGAGTCAGCAGGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: IMEQDHHLVVASSEKSQQAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...CTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR CAA 90 bp GAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTCGAGCGCTCGTTTCTTaGTCCGGATCGGGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ECEEQRDLSVTTAGAEWSRALVS*SGSGAL
Trigger: GAGCGCCCCCGATCCGGACAAAGAAACGAGCGCTCG...AGACCACTCTGCCCCAGCGGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437807.6
CDS GCA 90 bp GGTACAGCCAGCACCACTCCTCACACGGTGTCCCGTCAACACAAGTaGAGCTGTCCCCAAGGGTACAGGACCCTACTGGTGGGTAGCGAT +
Preference number: 5 (lower is better)
Translates to: GTASTTPHTVSRQHK*SCPQGYRTLLVGSD
Trigger: ATCGCTACCCACCAGTAGGGTCCTGTACCCTTGGGGACAGCTGCACTTGTGTTGACGGGACACCGTGTGAGGAGTGGTGCTGGCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS-3UTR CAA 90 bp AACGGGAGTGACCTGCTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCACAGCCACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NGSDLLRLQLRPDQSPTATFPVL*SKMASS
Trigger: GGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...GGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578913.5
CDS-3UTR CAA 90 bp TTGGGGAAGCACCTGACCGCTGGGGATGTCCACCAGGGAGAGGACGCTGTGTCGAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: LGKHLTAGDVHQGEDAVSKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...CGACACAGCGTCCTCTCCCTGGTGGACATCCCCAGCGGTCAGGTGCTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS TCA 90 bp CCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCAACCAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: PPSPPSSAQPQTGSL*RRRASSPGYQPAGT
Trigger: GGTCCCTGCTGGTTGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS TCA 90 bp CCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCGAGAGCACAGCGGT +
Preference number: 5 (lower is better)
Translates to: PPSPPSSAQPQTGSL*RRRASSPGYREHSG
Trigger: ACCGCTGTGCTCTCGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581196.5
ENST00000582395.5
CDS GCA 90 bp CATCATCGAAAGCGACAGCCACACTTGGTTGGCAGCAAAAGCATTTaGTGTTTCCTGCCTGAGGCTGGGCCCCGGAGGACTGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HHRKRQPHLVGSKSI*CFLPEAGPRRTAVA
Trigger: GGCCACAGCAGTCCTCCGGGGCCCAGCCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp ACAGGGCCTCTGCCCGTCTGGGCAGGCCCAGTGATTGTGGCAGGGTaGGAAGTACACCTCATCCCACAGCTGGATCTTAGATCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: TGPLPVWAGPVIVAG*EVHLIPQLDLRSSR
Trigger: TCTTGAGGATCTAAGATCCAGCTGTGGGATGAGGTGTACTTCCCACCCTGCCACAATCACTGGGCCTGCCCAGACGGGCAGAGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS CCA 90 bp CCCCTGTGCTGGCCTCCACCAAGAAAGGAACTGAAAGTCCCATCATaGCTTCCGGCCGTACTGGCTCTCGCACTGGCATGGACCAACGAT +
Preference number: 5 (lower is better)
Translates to: PLCWPPPRKELKVPS*LPAVLALALAWTND
Trigger: ATCGTTGGTCCATGCCAGTGCGAGAGCCAGTACGGCCGGAAGCCATGATGGGACTTTCAGTTCCTTTCTTGGTGGAGGCCAGCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000585044.5
CDS-3UTR CAA 90 bp CTTTCTGTGACGACCGCTGGGGCAGAGTGGTCTATGCGCCGAGATCCTGGCATCACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSVTTAGAEWSMRRDPGITFPVL*SKMASS
Trigger: GGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...GATGCCAGGATCTCGGCGCATAGACCACTCTGCCCCAGCGGTCGTCACAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CCTGGGTACACTCAGGAGACCAAGAGCACTGGCGGGTCAGGATGGTTGGCGTTCACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGYTQETKSTGGSGWLAFTFPVL*SKMASS
Trigger: GGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...GAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp GGCAATAGGCCAACTCGGCTGGAGGCACCAACTGAAGCCAAGGCCACGGGTCCTAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: GNRPTRLEAPTEAKATGPKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...AGGACCCGTGGCCTTGGCTTCAGTTGGTGCCTCCAGCCGAGTTGGCCTATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp GCCCGTCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: ARRKPEHHHVAFPEVPDLKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...AAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp CCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTGACGTAGAAGAGCACTCGCCCGAGGTCTaGCTGTGGCCCAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PVLQVLHSHKQAACDVEEHSPEV*LWPKAG
Trigger: TCCTGCTTTGGGCCACAGCAAGACCTCGGGCGAGTG...CTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS-3UTR CAA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAGTCTGGTCTCTGTGGTaGGGCACGTCACTGGATCCC +
Preference number: 5 (lower is better)
Translates to: PGLACCFMQCASSSMSRQVWSLW*GTSLDP
Trigger: GGGATCCAGTGACGTGCCCAACCACAGAGACCAGAC...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437807.6
ENST00000577436.5
CDS TCA 90 bp CCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTCCGCTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PPSPPSSAQPQTGSL*RRRASSPGYLRCSR
Trigger: CCTACTACAGCGGAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000579444.5
ENST00000582725.5
ENST00000583359.1
ENST00000583617.5
ENST00000584408.5
ENST00000584503.5
ENST00000584891.5
ENST00000585044.5
ENST00000585064.5
ENST00000585080.5
CDS TCA 90 bp CTCCGCTGTAGTAGGCAGCAGCCAGGCCAATCGACAAGATTCCTATaGAGAGAAAGTGACTGCCTGCCAACCAGCAGGGACCAGGACCGG +
Preference number: 5 (lower is better)
Translates to: LRCSRQQPGQSTRFL*RESDCLPTSRDQDR
Trigger: CCGGTCCTGGTCCCTGCTGGTTGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCTGCTGCCTACTACAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS TCA 90 bp GCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTCCGCTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: APSPPSSAQPQTGSL*RRRASSPGYLRCSR
Trigger: CCTACTACAGCGGAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582608.5
CDS CCA 90 bp AGTCGCACCAGCGCCACTGGCATCATCGAAAGCGACAGCCACACTTaGTTGGCAGCAAAAGCATTTGCTGTTTCCTGCCTGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SRTSATGIIESDSHT*LAAKAFAVSCLRLG
Trigger: GCCCAGCCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 90 bp CACCATCAGCCAGTCTCACCTGGTCTCTGTGGTTGGGCACGTCACTaGATCCCCCAGAGACCCCGTTTCCTGTGTAAGGAAGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: HHQPVSPGLCGWARH*IPQRPRFLCKEGPF
Trigger: AAAAGGGCCTTCCTTACACAGGAAACGGGGTCTCTGGGGGATCCAGTGACGTGCCCAACCACAGAGACCAGGTGAGACTGGCTGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS-3UTR CAA 90 bp GATGTCCACCAGGGAGAGGACGCTGTGTCGGGGACAACATGCAGCATCAGCACCAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: DVHQGEDAVSGTTCSISTKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...GGTGCTGATGCTGCATGTTGTCCCCGACACAGCGTCCTCTCCCTGGTGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp CCTGCCAGGTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAAGCTGTCAGCTCTGGCTaGCAGGGTCACCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: PARSSQVRERLELNFCRKAVSSG*QGHRPH
Trigger: GTGAGGCCGGTGACCCTGCAAGCCAGAGCTGACAGC...TTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGACCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS TCA 90 bp TCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTCCGCTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SPSPPSSAQPQTGSL*RRRASSPGYLRCSR
Trigger: CCTACTACAGCGGAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS TCA 90 bp CCTCCCAGTCCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTGGAGATGGGCATA +
Preference number: 5 (lower is better)
Translates to: PPSPPSSAQPQTGSL*RRRASSPGYLEMGI
Trigger: TATGCCCATCTCCAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGGACTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS-3UTR CAA 90 bp CCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCATGAGCAGGCAAACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGLACCFMQCASSSMSRQTFPVL*SKMASS
Trigger: GGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...TTGCCTGCTCATGCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp TCGCAAGCCGGAGCACCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: SQAGAPPCSLSRSTGPSPKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...AGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp GTCTTCCCAGGTTCGAGAGAGGCTGGAACTCAATTTCTGCAGAAAATCTCCCAGGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: VFPGSREAGTQFLQKISQGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...CTGGGAGATTTTCTGCAGAAATTGAGTTCCAGCCTCTCTCGAACCTGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS-3UTR CAA 90 bp ACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCGGCGGGTCAGGATGGTaGGCGTTCAGCTCCTACGGG +
Preference number: 5 (lower is better)
Translates to: TAYAEAECEEQRDLSVTTGGSGW*AFSSYG
Trigger: CCCGTAGGAGCTGAACGCCAACCATCCTGACCCGCC...GGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000582438.1
ENST00000584024.5
CDS GCA 90 bp AGCCAGGCCAATCGACAAGATTCCTATGAAGAGAAAGTGACTGCCTaGCTATTGATCCCGGTAAGACCCCACCTCCCTGGTGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SQANRQDSYEEKVTA*LLIPVRPHLPGAAG
Trigger: TCCCGCTGCACCAGGGAGGTGGGGTCTTACCGGGATCAATAGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578895.5
ENST00000585044.5
CDS-3UTR CAA 90 bp CCACCATGTAGCCTTTCCCGAAGTACCGGACCTTCTCCTCCTCCACGCTCACATAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: PPCSLSRSTGPSPPPRSHKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...ATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577888.5
ENST00000582725.5
ENST00000584024.5
CDS-3UTR CAA 90 bp AAGTCTGGATGTCCTGGTCTGGCCTGCTGTTTCATGCAGTGTGCAAGCAGCAGCAAGCTGGTGATGAGCTaGGCGATGGCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: KSGCPGLACCFMQCASSSKLVMS*AMASTS
Trigger: TGATGTGGAAGCCATCGCCAAGCTCATCACCAGCTT...GCTGCTGCTTGCACACTGCATGAAACAGCAGGCCAGACCAGGACATCCAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306645.10
ENST00000342572.12
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000582725.5
ENST00000584024.5
CDS TCA 90 bp CTCCGCTGTAGTAGGCAGCAGCCAGGCCAATCGACAAGATTCCTATaGAGAGAAAGTGACTGCCTGCCTATTGATCCCGGTAAGACCCCA +
Preference number: 5 (lower is better)
Translates to: LRCSRQQPGQSTRFL*RESDCLPIDPGKTP
Trigger: TGGGGTCTTACCGGGATCAATAGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCTGCTGCCTACTACAGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578895.5
ENST00000579444.5
ENST00000585044.5
CDS-3UTR CAA 90 bp ACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTGTGACGACCACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TAYAEAECEEQRDLSVTTTFPVL*SKMASS
Trigger: GGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...GGTCGTCACAGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000584024.5
CDS-3UTR CAA 90 bp TCTGGCCTCACAGCTTATGCTGAAGCTGAGTGTGAGGAACAGAGAGACCTTTCTACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: SGLTAYAEAECEEQRDLSTFPVL*SKMASE
Trigger: CTCGGAAGCCATCTTCGACAAGAGCACAGGGAAGGT...AGAAAGGTCTCTCTGTTCCTCACACTCAGCTTCAGCATAAGCTGTGAGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342572.12
CDS TCA 90 bp TCCATAACTGACACGGGTGTTACTCCAGTAGCACGTGGTGAGGCCTaGAGACTGTGCACAAAGAAATTACAACACAGCGTGTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: SITDTGVTPVARGEA*RLCTKKLQHSVSCK
Trigger: TTTGCATGACACGCTGTGTTGTAATTTCTTTGTGCACAGTCTTCAGGCCTCACCACGTGCTACTGGAGTAACACCCGTGTCAGTTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS TCA 90 bp CACAGTATACGCTATTCACAGTATTTACTAGACACATCTGCTGTGTaGGGCTCCATAACTGACACGGGTGTTACTCCAGTAGCACGTGGT +
Preference number: 5 (lower is better)
Translates to: HSIRYSQYLLDTSAV*GSITDTGVTPVARG
Trigger: ACCACGTGCTACTGGAGTAACACCCGTGTCAGTTATGGAGCCTCACACAGCAGATGTGTCTAGTAAATACTGTGAATAGCGTATACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578895.5
ENST00000585044.5
CDS GCA 72 bp GGGCTGGCGAGACCTCCGGCTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: GLARPPAAVAHD*TLREGVGEARR
Trigger: GCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGCCGGAGGTCTCGCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582438.1
CDS CCA 72 bp GGCTGGCGGGTCACATGCACAGCCCGCTGGTTCTCCTaGGAGTGCCGACTGCGGGGACCCGCTCAGCGCGAG +
Preference number: 6 (lower is better)
Translates to: GWRVTCTARWFS*ECRLRGPAQRE
Trigger: CTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 72 bp CGCGGTGCAGGCTGGCGGGTCACATGCACAGCCCGCTaGTTCTCCTGGGAGTGCCGACTGCGGGGACCCGCT +
Preference number: 6 (lower is better)
Translates to: RGAGWRVTCTAR*FSWECRLRGPA
Trigger: AGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp CGGGTCACATGCACAGCCCGCTGGTTCTCCTGGGAGTaGCGACTGCGGGGACCCGCTCAGCGCGAGGCCATC +
Preference number: 6 (lower is better)
Translates to: RVTCTARWFSWE*RLRGPAQREAI
Trigger: GATGGCCTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp CGAGACCTCCGGCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: RDLRLRWPMTAL*VRGWEKPVASR
Trigger: CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGCCGGAGGTCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582438.1
CDS GCA 72 bp GTGCCACGGGTCCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: VPRVLRWPMTAL*VRGWEKPVASR
Trigger: CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGACCCGTGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583617.5
CDS CAA 72 bp ATCGTGCCACTGGACTCCAGCCGAGCGCTCGTTTCTTaGTCCGGATCGGGGGCGCTCCCGCCGCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: IVPLDSSRALVS*SGSGALPPPGP
Trigger: TGGCCCCGGCGGCGGGAGCGCCCCCGATCCGGACAAAGAAACGAGCGCTCGGCTGGAGTCCAGTGGCACGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582456.1
CDS GCA 72 bp GAAGGACGTGCCCGCGGTGCAGGCTGGCGGGTCACATaGACAGCCCGCTGGTTCTCCTGGGAGTGCCGACTG +
Preference number: 6 (lower is better)
Translates to: EGRARGAGWRVT*TARWFSWECRL
Trigger: CAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp TGCAGGGTCCTCTGGGTGGGAAGGACGTGCCCGCGGTaGAGGCTGGCGGGTCACATGCACAGCCCGCTGGTT +
Preference number: 6 (lower is better)
Translates to: CRVLWVGRTCPR*RLAGHMHSPLV
Trigger: AACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCCTTCCCACCCAGAGGACCCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp ACGGTCAGTGGCCGAGCCATCCCCGCCCACACATGCTaGCCGGCAGTCGCACCAGCGCCACTGGCATCATCG +
Preference number: 6 (lower is better)
Translates to: TVSGRAIPAHTC*PAVAPAPLASS
Trigger: CGATGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGGCGGGGATGGCTCGGCCACTGACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp GAGACGGTCAGTGGCCGAGCCATCCCCGCCCACACATaGTGCCCGGCAGTCGCACCAGCGCCACTGGCATCA +
Preference number: 6 (lower is better)
Translates to: ETVSGRAIPAHT*CPAVAPAPLAS
Trigger: TGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGGCGGGGATGGCTCGGCCACTGACCGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp GGCGTGCGGAAGAACAGCAGCGCATGGAGGGCGCGGTaGCCGCCAGCAATCAAGGGGCAGAGGTGCCGATCC +
Preference number: 6 (lower is better)
Translates to: GVRKNSSAWRAR*PPAIKGQRCRS
Trigger: GGATCGGCACCTCTGCCCCTTGATTGCTGGCGGGCACCGCGCCCTCCATGCGCTGCTGTTCTTCCGCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS GCA 72 bp AGGGAGAGGACGCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: RERTLRWPMTAL*VRGWEKPVASR
Trigger: CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGCGTCCTCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579751.5
CDS GCA 72 bp GTCCACCAGGGAGAGGACGCTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: VHQGEDAAVAHD*TLREGVGEARR
Trigger: GCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGCGTCCTCTCCCTGGTGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579751.5
CDS GCA 72 bp CGGGAATGTGCCACGGGTCCTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: RECATGPAVAHD*TLREGVGEARR
Trigger: GCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGACCCGTGGCACATTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583617.5
CDS CCA 72 bp TCCTCTGGGTGGGAAGGACGTGCCCGCGGTGCAGGCTaGCGGGTCACATGCACAGCCCGCTGGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSGWEGRARGAG*RVTCTARWFSW
Trigger: CCAGGAGAACCAGCGGGCTGTGCATGTGACCCGCCAGCCTGCACCGCGGGCACGTCCTTCCCACCCAGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp CCACAGCCTTACCTGCGGTGGCCCATGACTGCACTCTaGGTGAGGGGGTGGGAGAAGCCCGTCGCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: PQPYLRWPMTAL*VRGWEKPVASR
Trigger: CCGGCTTGCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS GCA 72 bp CTTCCACAGCGGAGTTCCGCACGGGCGCAGCAGCCCTaGCACTTCACCGTACGCTCCCAACACTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LPQRSSARAQQP*HFTVRSQHWPQ
Trigger: CTGGGGCCAGTGTTGGGAGCGTACGGTGAAGTGGCAGGGCTGCTGCGCCCGTGCGGAACTCCGCTGTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS CCA 72 bp GAGAGGCAGGTGGGGCGCACAGGGCCTCTGCCCGTCTaGGCAGGCCCAGTGATTGTGGCAGGGTGGGAAGTA +
Preference number: 6 (lower is better)
Translates to: ERQVGRTGPLPV*AGPVIVAGWEV
Trigger: TACTTCCCACCCTGCCACAATCACTGGGCCTGCCCAGACGGGCAGAGGCCCTGTGCGCCCCACCTGCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS CCA 72 bp CTGCCTGCCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: LPANQQGPGPDA*SPLQMEAGAGA
Trigger: CGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGCAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS TCA 72 bp GGCGCACAGGGCCTCTGCCCGTCTGGGCAGGCCCAGTaGTTGTGGCAGGGTGGGAAGTACACCTCATCCCAC +
Preference number: 6 (lower is better)
Translates to: GAQGLCPSGQAQ*LWQGGKYTSSH
Trigger: GTGGGATGAGGTGTACTTCCCACCCTGCCACAATCACTGGGCCTGCCCAGACGGGCAGAGGCCCTGTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS GCA 72 bp CATGCACAGCCCGCTGGTTCTCCTGGGAGTGCCGACTaGGGGGACCCGCTCAGCGCGAGGCCATCTTTACAC +
Preference number: 6 (lower is better)
Translates to: HAQPAGSPGSAD*GDPLSARPSLH
Trigger: GTGTAAAGATGGCCTCGCGCTGAGCGGGTCCCCGCAGTCGGCACTCCCAGGAGAACCAGCGGGCTGTGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp GCTCACATCACGGACATCATGGAGCAGGACCACCACTaGGGGGAGACGGTCAGTGGCCGAGCCATCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AHITDIMEQDHH*GETVSGRAIPA
Trigger: GGCGGGGATGGCTCGGCCACTGACCGTCTCCCCGCAGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp GTGACTGCCTGCCAACCAGCAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VTACQPAGTRTG*LEPSSDGGGSW
Trigger: CCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGCAGGCAGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS GCA 72 bp AGCCCAGGCTATCAACCAGCAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPGYQPAGTRTG*LEPSSDGGGSW
Trigger: CCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGATAGCCTGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS GCA 72 bp CAAAGTCCCACAGCCTTACCTGCGGTGGCCCATGACTaGACTCTGCGTGAGGGGGTGGGAGAAGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: QSPTALPAVAHD*TLREGVGEARR
Trigger: GCGACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGGGACTTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS GCA 72 bp GGAGAGCCTTACCAACCAGCAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GEPYQPAGTRTG*LEPSSDGGGSW
Trigger: CCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGTAAGGCTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583778.1
ENST00000585044.5
CDS CCA 72 bp GGATGCCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTaGTGCGGGTCTCCACCTGCAGGTACATCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: GCLEPSSDGGGS*CGSPPAGTSRE
Trigger: CTCTCGGGATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000306645.10
ENST00000434650.6
ENST00000437807.6
ENST00000577436.5
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000582545.2
ENST00000582725.5
ENST00000583359.1
ENST00000583617.5
ENST00000583778.1
ENST00000584024.5
ENST00000584408.5
ENST00000585044.5
ENST00000585064.5
ENST00000585080.5
CDS CCA 72 bp CAGGCTATCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: QAINQQGPGPDA*SPLQMEAGAGA
Trigger: CGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGATAGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS CCA 72 bp GGGCAGCCACCTCTTCGGGTACTGGGGCGGTCCCAATaGCTGTCAGAAAACGGCACAGCTGCCTCCCACAGC +
Preference number: 6 (lower is better)
Translates to: GQPPLRVLGRSQ*LSENGTAASHS
Trigger: GCTGTGGGAGGCAGCTGTGCCGTTTTCTGACAGCCATTGGGACCGCCCCAGTACCCGAAGAGGTGGCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 72 bp AGCCTTACCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: SLTNQQGPGPDA*SPLQMEAGAGA
Trigger: CGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGTAAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583778.1
ENST00000585044.5
CDS CCA 72 bp GTCAGGCTTCCGGTTCTGGGGTTCTGGGGAGGGACGTaGAGAGCCTTACCAACCAGCAGGGACCAGGACCGG +
Preference number: 6 (lower is better)
Translates to: VRLPVLGFWGGT*RALPTSRDQDR
Trigger: CCGGTCCTGGTCCCTGCTGGTTGGTAAGGCTCTCCACGTCCCTCCCCAGAACCCCAGAACCGGAAGCCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000583778.1
ENST00000585044.5
CDS GCA 72 bp TGCGGGGACCCGCTCAGCGCGAGGCCATCTTTACACTaGACTGTTCCTCCAGGTCTCCCCAAGGTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: CGDPLSARPSLH*TVPPGLPKVGC
Trigger: GCAGCCAACCTTGGGGAGACCTGGAGGAACAGTGCAGTGTAAAGATGGCCTCGCGCTGAGCGGGTCCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp GAGCAGGTGAGCAGGTGGGGCGTATCCGTGGGATCCTaGTTCCAGCGGGCAGGACACAACCCTGGTCACCAA +
Preference number: 6 (lower is better)
Translates to: EQVSRWGVSVGS*FQRAGHNPGHQ
Trigger: TTGGTGACCAGGGTTGTGTCCTGCCCGCTGGAAGCAGGATCCCACGGATACGCCCCACCTGCTCACCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578064.1
ENST00000578941.5
ENST00000582395.5
ENST00000582608.5
CDS CCA 72 bp CAAGATTCCAACCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: QDSNQQGPGPDA*SPLQMEAGAGA
Trigger: CGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGAATCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000583617.5
ENST00000584024.5
ENST00000585064.5
ENST00000585080.5
CDS CCA 72 bp CCCGTGGCAACTCAGGGCAGCCACCTCTTCGGGTACTaGGGCGGTCCCAATGGCTGTCAGAAAACGGCACAG +
Preference number: 6 (lower is better)
Translates to: PVATQGSHLFGY*GGPNGCQKTAQ
Trigger: CTGTGCCGTTTTCTGACAGCCATTGGGACCGCCCCAGTACCCGAAGAGGTGGCTGCCCTGAGTTGCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 72 bp CCCACACATGCTGCCCGGCAGTCGCACCAGCGCCACTaGCATCATCGAAAGCGACAGCCACACTTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: PTHAARQSHQRH*HHRKRQPHLVG
Trigger: GCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCGACTGCCGGGCAGCATGTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 72 bp TCCGGCCAGATCAAAGTCCCACAGCCTTACCTGCGGTaGCCCATGACTGCACTCTGCGTGAGGGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: SGQIKVPQPYLR*PMTALCVRGWE
Trigger: CTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGGTAAGGCTGTGGGACTTTGATCTGGCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577707.5
ENST00000578913.5
CDS CCA 72 bp CAGCAGCCCTGCCACTTCACCGTACGCTCCCAACACTaGCCCCAGGGACCCCGTTCTGGTAGTTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: QQPCHFTVRSQH*PQGPRSGSFSG
Trigger: CCCTGAGAAACTACCAGAACGGGGTCCCTGGGGCCAGTGTTGGGAGCGTACGGTGAAGTGGCAGGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS CCA 72 bp TCGACAAGATTCCAGCAGGGACCAGGACCGGATGCCTaGAGCCCTCTTCAGATGGAGGCGGGAGCTGGTGCG +
Preference number: 6 (lower is better)
Translates to: STRFQQGPGPDA*SPLQMEAGAGA
Trigger: CGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGAATCTTGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583359.1
ENST00000584408.5
CDS TCA 72 bp AGCTGCCCCATAGCTCTGGGCAGTCAGGAACGGGAGTaGCCTGCTACGGCTGCAGCTCCGGCCAGATCAAAG +
Preference number: 6 (lower is better)
Translates to: SCPIALGSQERE*PATAAAPARSK
Trigger: CTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGAGCTATGGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS GCA 72 bp TCGACAAGATTCCAACCAGCAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: STRFQPAGTRTG*LEPSSDGGGSW
Trigger: CCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGTTGGAATCTTGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000583617.5
ENST00000584024.5
ENST00000585064.5
ENST00000585080.5
CDS GCA 72 bp CCCCATAGCTCTGGGCAGTCAGGAACGGGAGTGACCTaGTACGGCTGCAGCTCCGGCCAGATCAAAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PHSSGQSGTGVT*YGCSSGQIKVP
Trigger: TGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGAGCTATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS GCA 72 bp CCAATCGACAAGATTCCAGCAGGGACCAGGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PIDKIPAGTRTG*LEPSSDGGGSW
Trigger: CCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCTGGTCCCTGCTGGAATCTTGTCGATTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583359.1
ENST00000584408.5
CDS CCA 72 bp GAGCTACAGCTGCATCACCACCTGCCCCGTCCTGTCTaGAAACCTTATGTCCTGAGGCCGCTAGCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: ELQLHHHLPRPV*KPYVLRPLAPS
Trigger: GCTGGGGGCTAGCGGCCTCAGGACATAAGGTTTCCAGACAGGACGGGGCAGGTGGTGATGCAGCTGTAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000577732.5
ENST00000583242.1
ENST00000583359.1
ENST00000585044.5
CDS CCA 72 bp CACCTGCAGCCCCAGACACCATCAGCCAGTCTCACCTaGTCTCTGTGGTTGGGCACGTCACTGGATCCCCCA +
Preference number: 6 (lower is better)
Translates to: HLQPQTPSASLT*SLWLGTSLDPP
Trigger: TGGGGGATCCAGTGACGTGCCCAACCACAGAGACCAGGTGAGACTGGCTGATGGTGTCTGGGGCTGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS GCA 72 bp GGGGGCTGTTTCCCGCTCAGACTCACGAGCTACAGCTaGATCACCACCTGCCCCGTCCTGTCTGGAAACCTT +
Preference number: 6 (lower is better)
Translates to: GGCFPLRLTSYS*ITTCPVLSGNL
Trigger: AAGGTTTCCAGACAGGACGGGGCAGGTGGTGATGCAGCTGTAGCTCGTGAGTCTGAGCGGGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577436.5
ENST00000577732.5
ENST00000583242.1
ENST00000583359.1
ENST00000585044.5
CDS GCA 72 bp TCTGGGCAGTCAGGAACGGGAGTGACCTGCTACGGCTaGAGCTCCGGCCAGATCAAAGTCCCACAGCCTTAC +
Preference number: 6 (lower is better)
Translates to: SGQSGTGVTCYG*SSGQIKVPQPY
Trigger: GTAAGGCTGTGGGACTTTGATCTGGCCGGAGCTGCAGCCGTAGCAGGTCACTCCCGTTCCTGACTGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577707.5
CDS CCA 72 bp ACCTTCTCCTCCTCCACGCTCACATCACGGACATCATaGAGCAGGACCACCACTGCGGGGAGACGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: TFSSSTLTSRTS*SRTTTAGRRSV
Trigger: CACTGACCGTCTCCCCGCAGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CCA 72 bp ACCTTCTCCTCCTCCACGCTCACATCACGGACATCATaGAGCAGGACCACCACCTGGTCGTGGCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: TFSSSTLTSRTS*SRTTTWSWPAL
Trigger: GAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCCGTGATGTGAGCGTGGAGGAGGAGAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577888.5
CDS CCA 72 bp TCCCATCATGGCTTCCGGCCGTACTGGCTCTCGCACTaGCATGGACCAACGATCTCAGCTCTCTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SHHGFRPYWLSH*HGPTISALSLP
Trigger: GGGCAGAGAGAGAGCTGAGATCGTTGGTCCATGCCAGTGCGAGAGCCAGTACGGCCGGAAGCCATGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000585044.5
CDS CCA 72 bp AGTGCAGCTGTCCCCAAGGGTACAGGACCCTACTGGTaGGTAGCGATGGAGGACGGGAGGCTAAGTGGACTG +
Preference number: 6 (lower is better)
Translates to: SAAVPKGTGPYW*VAMEDGRLSGL
Trigger: CAGTCCACTTAGCCTCCCGTCCTCCATCGCTACCCACCAGTAGGGTCCTGTACCCTTGGGGACAGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS CAA 90 bp CGCACCAGCGCCACTGGCATCATCGAAAGCGACAGCCACACTTGGTaGGCAGCAAAAGCATTTGCTGTTTCCTGCCTGAGGCTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: RTSATGIIESDSHTW*AAKAFAVSCLRLGP
Trigger: GGGGCCCAGCCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp AGCACCACTCCTCACACGGTGTCCCGTCAACACAAGTaGAGCTGTCCCCAAGGGTACAGGACCCTACTGGTG +
Preference number: 6 (lower is better)
Translates to: STTPHTVSRQHK*SCPQGYRTLLV
Trigger: CACCAGTAGGGTCCTGTACCCTTGGGGACAGCTGCACTTGTGTTGACGGGACACCGTGTGAGGAGTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS CCA 72 bp CTGCCCGTCTGGGCAGGCCCAGTGATTGTGGCAGGGTaGGAAGTACACCTCATCCCACAGCTGGATCTTAGA +
Preference number: 6 (lower is better)
Translates to: LPVWAGPVIVAG*EVHLIPQLDLR
Trigger: TCTAAGATCCAGCTGTGGGATGAGGTGTACTTCCCACCCTGCCACAATCACTGGGCCTGCCCAGACGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS CAA 72 bp CAGACACCATCAGCCAGTCTCACCTGGTCTCTGTGGTaGGGCACGTCACTGGATCCCCCAGAGACCCCGTTT +
Preference number: 6 (lower is better)
Translates to: QTPSASLTWSLW*GTSLDPPETPF
Trigger: AAACGGGGTCTCTGGGGGATCCAGTGACGTGCCCAACCACAGAGACCAGGTGAGACTGGCTGATGGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS CAA 90 bp CAGTCGCACCAGCGCCACTGGCATCATCGAAAGCGACAGCCACACTaGGTTGGCAGCAAAAGCATTTGCTGTTTCCTGCCTGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: QSHQRHWHHRKRQPH*VGSKSICCFLPEAG
Trigger: CCCAGCCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTGGTGCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS TCA 72 bp CCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTCCGC +
Preference number: 6 (lower is better)
Translates to: PPSSAQPQTGSL*RRRASSPGYLR
Trigger: GCGGAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000306645.10
ENST00000437807.6
ENST00000577471.5
ENST00000577696.5
ENST00000577732.5
ENST00000577834.5
ENST00000577888.5
ENST00000578913.5
ENST00000578919.5
ENST00000578941.5
ENST00000579444.5
ENST00000582608.5
ENST00000582725.5
ENST00000583359.1
ENST00000583617.5
ENST00000584408.5
ENST00000584503.5
ENST00000584891.5
ENST00000585044.5
ENST00000585064.5
ENST00000585080.5
CDS TCA 72 bp CCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCGAGAGCACA +
Preference number: 6 (lower is better)
Translates to: PPSSAQPQTGSL*RRRASSPGEST
Trigger: TGTGCTCTCGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580560.5
CDS GCA 72 bp AAGCGACAGCCACACTTGGTTGGCAGCAAAAGCATTTaGTGTTTCCTGCCTGAGGCTGGGCCCCGGAGGACT +
Preference number: 6 (lower is better)
Translates to: KRQPHLVGSKSI*CFLPEAGPRRT
Trigger: AGTCCTCCGGGGCCCAGCCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS GCA 72 bp TCTCTCTGCCCTCCTCCACCTGCTGAAAGTTCAGACTaGACAGTAGAGGGTCCCAAAGCGGCCAGAACCGAC +
Preference number: 6 (lower is better)
Translates to: SLCPPPPAESSD*TVEGPKAARTD
Trigger: GTCGGTTCTGGCCGCTTTGGGACCCTCTACTGTGCAGTCTGAACTTTCAGCAGGTGGAGGAGGGCAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS CCA 72 bp TGGCCTCCACCAAGAAAGGAACTGAAAGTCCCATCATaGCTTCCGGCCGTACTGGCTCTCGCACTGGCATGG +
Preference number: 6 (lower is better)
Translates to: WPPPRKELKVPS*LPAVLALALAW
Trigger: CCATGCCAGTGCGAGAGCCAGTACGGCCGGAAGCCATGATGGGACTTTCAGTTCCTTTCTTGGTGGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583242.1
ENST00000583359.1
ENST00000585044.5
CDS TCA 72 bp CCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCTGGAG +
Preference number: 6 (lower is better)
Translates to: PPSSAQPQTGSL*RRRASSPGYLE
Trigger: CTCCAGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578895.5
CDS TCA 72 bp CCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCGAGAG +
Preference number: 6 (lower is better)
Translates to: PPSSAQPQTGSL*RRRASSPGYRE
Trigger: CTCTCGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581196.5
ENST00000582395.5
CDS CCA 72 bp TCCTTTTTGAAAGTCAGGCTTCCGGTTCTGGGGTTCTaGGGAGGGACGTGGAGAGCCTTACCAACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SFLKVRLPVLGF*GGTWRALPTSR
Trigger: CCTGCTGGTTGGTAAGGCTCTCCACGTCCCTCCCCAGAACCCCAGAACCGGAAGCCTGACTTTCAAAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583778.1
ENST00000585044.5
CDS CAA 72 bp TCTCAGCACTTTGGGAGGACGAGGCGTGCGGATTGTTaGAGTCACGGAGTTCAAGACCAGCCAGGGCAACGT +
Preference number: 6 (lower is better)
Translates to: SQHFGRTRRADC*SHGVQDQPGQR
Trigger: ACGTTGCCCTGGCTGGTCTTGAACTCCGTGACTCAAACAATCCGCACGCCTCGTCCTCCCAAAGTGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582456.1
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS CAA 90 bp GCCAATCGACAAGATTCCTATGAAGAGAAAGTGACTGCCTGCCTATaGATCCCGGTAAGACCCCACCTCCCTGGTGCAGCGGGACCAGGA +
Preference number: 6 (lower is better)
Translates to: ANRQDSYEEKVTACL*IPVRPHLPGAAGPG
Trigger: TCCTGGTCCCGCTGCACCAGGGAGGTGGGGTCTTACCGGGATCAATAGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578895.5
ENST00000585044.5
CDS TCA 72 bp CCTCCAAGTTCTGCACAGCCACAAACAGGCAGCCTGTaGCGTAGAAGAGCTTCCAGCCCAGGCTATCAACCA +
Preference number: 6 (lower is better)
Translates to: PPSSAQPQTGSL*RRRASSPGYQP
Trigger: TGGTTGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCAGAACTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434650.6
ENST00000577436.5
ENST00000582545.2
CDS CAA 72 bp AGGCTGAACGTCTTCAAAACAACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCGAGAGCACAGCGGTCCCC +
Preference number: 6 (lower is better)
Translates to: RLNVFKTTFPVL*SKMASESTAVP
Trigger: GGGGACCGCTGTGCTCTCGGAAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342572.12
ENST00000577707.5
ENST00000578064.1
CDS TCA 72 bp AGTAGGCAGCAGCCAGGCCAATCGACAAGATTCCTATaGAGAGAAAGTGACTGCCTGCCAACCAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SRQQPGQSTRFL*RESDCLPTSRD
Trigger: GTCCCTGCTGGTTGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCTGCTGCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582725.5
CDS CCA 72 bp AGCGCCACTGGCATCATCGAAAGCGACAGCCACACTTaGTTGGCAGCAAAAGCATTTGCTGTTTCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SATGIIESDSHT*LAAKAFAVSCL
Trigger: CAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CAA 72 bp GCCACTGGCATCATCGAAAGCGACAGCCACACTTGGTaGGCAGCAAAAGCATTTGCTGTTTCCTGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: ATGIIESDSHTW*AAKAFAVSCLR
Trigger: CCTCAGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CAA 72 bp CAGCGCCACTGGCATCATCGAAAGCGACAGCCACACTaGGTTGGCAGCAAAAGCATTTGCTGTTTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: QRHWHHRKRQPH*VGSKSICCFLP
Trigger: AGGCAGGAAACAGCAAATGCTTTTGCTGCCAACCAAGTGTGGCTGTCGCTTTCGATGATGCCAGTGGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536759.2
CDS CAA 72 bp AGGCTGAACGTCTTCAAAACAACCTTCCCTGTGCTCTaGTCGAAGATGGCTTCCTCCGCTGTAGTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: RLNVFKTTFPVL*SKMASSAVVGS
Trigger: GCTGCCTACTACAGCGGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584024.5
CDS TCA 72 bp AGTAGGCAGCAGCCAGGCCAATCGACAAGATTCCTATaGAGAGAAAGTGACTGCCTGCCTATTGATCCCGGT +
Preference number: 6 (lower is better)
Translates to: SRQQPGQSTRFL*RESDCLPIDPG
Trigger: ACCGGGATCAATAGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATTGGCCTGGCTGCTGCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578895.5
ENST00000579444.5
ENST00000585044.5
CDS TCA 72 bp GACACGGGTGTTACTCCAGTAGCACGTGGTGAGGCCTaGAGACTGTGCACAAAGAAATTACAACACAGCGTG +
Preference number: 6 (lower is better)
Translates to: DTGVTPVARGEA*RLCTKKLQHSV
Trigger: CACGCTGTGTTGTAATTTCTTTGTGCACAGTCTTCAGGCCTCACCACGTGCTACTGGAGTAACACCCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585044.5
CDS CAA 72 bp AGGCTGAACGTCTTCAAAACAACCTTCCCTGTGCTCTaGTCGAAGATGGCTCCCAGTCCTCCAAGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RLNVFKTTFPVL*SKMAPSPPSSA
Trigger: TGCAGAACTTGGAGGACTGGGAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582608.5
CDS GCA 72 bp AATCGACAAGATTCCTATGAAGAGAAAGTGACTGCCTaGCTATTGATCCCGGTAAGACCCCACCTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: NRQDSYEEKVTA*LLIPVRPHLPG
Trigger: ACCAGGGAGGTGGGGTCTTACCGGGATCAATAGGCAGGCAGTCACTTTCTCTTCATAGGAATCTTGTCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578895.5
ENST00000579444.5
ENST00000585044.5
CDS TCA 72 bp GGACCCCGTTCTGGTAGTTTCTCAGGGCTTTCCCTGTaGAGTCAAATCAAATTTCTGACATTAAGTAGGGGG +
Preference number: 6 (lower is better)
Translates to: GPRSGSFSGLSL*SQIKFLTLSRG
Trigger: CCCCCTACTTAATGTCAGAAATTTGATTTGACTTCACAGGGAAAGCCCTGAGAAACTACCAGAACGGGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582456.1
ENST00000584791.1
ENST00000585044.5
ENST00000585115.1
CDS TCA 72 bp CGCTATTCACAGTATTTACTAGACACATCTGCTGTGTaGGGCTCCATAACTGACACGGGTGTTACTCCAGTA +
Preference number: 6 (lower is better)
Translates to: RYSQYLLDTSAV*GSITDTGVTPV
Trigger: TACTGGAGTAACACCCGTGTCAGTTATGGAGCCTCACACAGCAGATGTGTCTAGTAAATACTGTGAATAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578895.5
ENST00000585044.5
CDS GCA 72 bp AGACTGTGCACAAAGAAATTACAACACAGCGTGTCATaGAAAACACACAGGAGGCTGTGGCGTGTCACAAAA +
Preference number: 6 (lower is better)
Translates to: RLCTKKLQHSVS*KTHRRLWRVTK
Trigger: TTTTGTGACACGCCACAGCCTCCTGTGTGTTTTGCATGACACGCTGTGTTGTAATTTCTTTGTGCACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585044.5