RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CXXC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000171604

Ensembl transcript IDs: ENST00000302517.8, ENST00000502295.1, ENST00000502336.5, ENST00000502716.1, ENST00000503511.1, ENST00000504844.1, ENST00000504944.1, ENST00000507139.5, ENST00000509238.1, ENST00000511048.1, ENST00000511457.1, ENST00000511591.1, ENST00000512816.1, ENST00000515038.1, ENST00000520967.1

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTaGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: AASTRRHQHSLYERE*ILQANYALFHGRKE
Trigger: TTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR GCA 90 bp AAGGTTACAGAAAATTTACATTCTCTACACAAAAACTGCATCTCCTaGACAGACAACATCGACATCGACACAGGAAGGAAACTGATTGTC +
Preference number: 1 (lower is better)
Translates to: KVTENLHSLHKNCIS*TDNIDIDTGRKLIV
Trigger: GACAATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGAATGTAAATTTTCTGTAACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CAA 90 bp TTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LVLKTGASVCLRPNP*LETTRAVTLHGEGS
Trigger: GCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CCA 90 bp GCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCCAGAACTCTGCACGCGTGGATaGATACAGAGCGGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: AGDHAKKPFLLLPLARPELCTRG*IQSGFY
Trigger: GTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAG...TTCTGGCCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
3UTR-3UTR TCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIRPHEQ*HCTERA
Trigger: TGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCT...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR TCA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPRPHEQ*HCTERA
Trigger: TGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCT...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTTTCGCCCGAATCCCTTaGTGGAGACCACACGAGCAG +
Preference number: 2 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIFARIP*WRPHEQ
Trigger: CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAA...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR GCA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGTCTCCAGGCAAACTATaGACTATTTCATGGTCGGAA +
Preference number: 2 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARSPGKL*TISWSE
Trigger: TTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGA...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
3UTR-3UTR GCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATCTCTACACAAAAACTaGATCTCCTGCACAGACAAC +
Preference number: 2 (lower is better)
Translates to: TERLLHGAINILFMNVSGSLHKN*ISCTDN
Trigger: GTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGA...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR GCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATCTCCAGGCAAACTATaGACTATTTCATGGTCGGAA +
Preference number: 2 (lower is better)
Translates to: TERLLHGAINILFMNVSGSPGKL*TISWSE
Trigger: TTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGA...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR TCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGACACAGGAAGGAAACTaGTTGTCCATTCTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKTQEGN*LSILCP
Trigger: TGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGT...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR GCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCGGTTCTAAAGACGGGTaGATCCGTTTGTCTTCGCCC +
Preference number: 2 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFGSKDG*IRLSSP
Trigger: GGGCGAAGACAAACGGATGCACCCGTCTTTAGAACC...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CAA 90 bp GACAACATCGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTT +
Preference number: 2 (lower is better)
Translates to: DNIDIDTGRKLIVHS*PRKSRYFIDSSLPL
Trigger: AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR TCA 72 bp TTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCAGCTTTGGGTTCCGCC +
Preference number: 3 (lower is better)
Translates to: FARIPCWRPHEQ*HCTERAALGSA
Trigger: GGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp GCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCCAGAAGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTT +
Preference number: 3 (lower is better)
Translates to: AGDHAKKPFLLLPLARPEDGCIR*SSPESL
Trigger: AAGGGATTCGGGCGAAGACAAACGGATGCACCCGTC...TTCTGGCCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
3UTR-3UTR CAA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGACTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCA +
Preference number: 3 (lower is better)
Translates to: TERLLHGAINILFMNVSGLRPNP*LETTRA
Trigger: TGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAG...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTTGTGAGAGAATATTTTaGGTTCTAAAGACGGGTGCA +
Preference number: 3 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSACERIF*VLKTGA
Trigger: TGCACCCGTCTTTAGAACCAAAAATATTCTCTCACA...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGCTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCA +
Preference number: 3 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKLRPNP*LETTRA
Trigger: TGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAG...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGCTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTAC +
Preference number: 3 (lower is better)
Translates to: MDTERLLHGAINILFMNVLIVHS*PRKSRY
Trigger: GTACCGAGACTTCCTGGGCAAAGAATGGACAATCAG...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR TCA 72 bp GCACAGACAACATCGACATCGACACAGGAAGGAAACTaGTTGTCCATTCTTTGCCCAGGAAGTCTCGGTACT +
Preference number: 3 (lower is better)
Translates to: AQTTSTSTQEGN*LSILCPGSLGT
Trigger: AGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCACACGAGCAGTGACATaGCACGGAGAGGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVTRAVT*HGEGSF
Trigger: AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTACACGAGCAGTGACATaGCACGGAGAGGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: SLYEREWILQANYALFHGTRAVT*HGEGSF
Trigger: AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGT...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CCA 72 bp ACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTaGATTCTCCAGGCAAACTATGCACTATTTCATGGT +
Preference number: 3 (lower is better)
Translates to: TRRHQHSLYERE*ILQANYALFHG
Trigger: ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR-3UTR CAA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTAC +
Preference number: 3 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFLIVHS*PRKSRY
Trigger: GTACCGAGACTTCCTGGGCAAAGAATGGACAATCAG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR GCA 72 bp GAAAATTTACATTCTCTACACAAAAACTGCATCTCCTaGACAGACAACATCGACATCGACACAGGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: ENLHSLHKNCIS*TDNIDIDTGRK
Trigger: TTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGAATGTAAATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR GCA 72 bp AAGGTTACAGAAAATTTACATTCTCTACACAAAAACTaGATCTCCTGCACAGACAACATCGACATCGACACA +
Preference number: 3 (lower is better)
Translates to: KVTENLHSLHKN*ISCTDNIDIDT
Trigger: TGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGAATGTAAATTTTCTGTAACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTTGCTCTTGCCGCCAGTaGCGCCTCTGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSACSCRQ*RLCCRR
Trigger: GCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCA...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTCAGTGCCGCCTCTGCTaGCGCCGCCTCTACATCCCC +
Preference number: 4 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSAQCRLC*RRLYIP
Trigger: GGGGATGTAGAGGCGGCGGCAGCAGAGGCGGCACTG...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp AGCTCTGCACGCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATGCGGAGGGCTCAGCGTaGGGCGCCCGGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSARVDGYRAASTRRHQHAEGSA*GARTQQ
Trigger: CTGCTGAGTCCGGGCGCCGCACGCTGAGCCCTCCGC...ATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp CGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCGGCCACTGCTGCCACTaGCACCGCTGCCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPNPLLETTRAVTLHGEGGHCCH*HRCHWC
Trigger: GCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCC...GCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGGGAGGCAGCGGCTaGAGCCGCAGTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGQGGSG*SRSGLV
Trigger: GACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGTCCAGCCGCCAGCAGTaGCCGGGTCCGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARSSRQQ*PGPEPE
Trigger: CTCGGGCTCCGGACCCGGGCACTGCTGGCGGCTGGA...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp CGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCCTCCGCCCATCATGCTaGCACCGCCACTACCACCAC +
Preference number: 4 (lower is better)
Translates to: RPNPLLETTRAVTLHGEGLRPSC*HRHYHH
Trigger: GTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAG...GCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTGCCGCCGCCAGGTCATaGCCATTGGCCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSAAAARS*PLANRE
Trigger: CTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGC...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGGCCCGCTCTGCCTTaGTCAGCAGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQWPALP*SAGWPQ
Trigger: CTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCA...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTCTGCCGCCGGCATCCTaGGAGCCACCGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFLPPAS*EPPPRL
Trigger: GAGCCTCGGCGGTGGCTCCCAGGATGCCGGCGGCAG...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTAGTCGGACTGGCCATTaGGGGCTTCGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSASRTGH*GLRHLP
Trigger: TGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACT...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGACTGCAGAGGGAGCCTaGCAACTGCCGAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQTAEGA*QLPRVH
Trigger: GTGGACCCTCGGCAGTTGGCAGGCTCCCTCTGCAGT...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCGGCTGCAGCCGCAGTaGCCTTGTCAGCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGRLQPQ*PCQQTL
Trigger: GAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGTCTTCTTGCCGGAGCTaGTGGCAGAGGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGSSCRS*WQRPAL
Trigger: GAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGA...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCCCTGCTGGCAGCTCTaGACGCGTGGATGGATACAG +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGPCWQL*TRGWIQ
Trigger: CTGTATCCATCCACGCGTGCAGAGCTGCCAGCAGGG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTTGCCACCGCTGCCATTaGTGCTGCTGCTGCTACTGC +
Preference number: 4 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSACHRCH*CCCCYC
Trigger: GCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCA...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTGCCGCCGCCAGGTCATaGCCATTGGCCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFAAARS*PLANRE
Trigger: CTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGC...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGTGGCCCGCTCTGCCTTaGTCAGCAGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARWPALP*SAGWPQ
Trigger: CTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCA...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGTTCGCCCGAATCCCTTaGTGGAGACCACACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGFARIP*WRPHEQ
Trigger: CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAA...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCTCAGGGCAGGCACATaGTCAGGTGTCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGLRAGT*SGVQVE
Trigger: TTCCACCTGGACACCTGACCATGTGCCTGCCCTGAG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCCTGCCGCCGGCATCCTaGGAGCCACCGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSLPPAS*EPPPRL
Trigger: GAGCCTCGGCGGTGGCTCCCAGGATGCCGGCGGCAG...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AGCTCTGCACGCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATCGGCTGCAGCCGCAGTaGCCTTGTCAGCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: SSARVDGYRAASTRRHQHRLQPQ*PCQQTL
Trigger: GAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCG...ATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCTGCACTGCTCGCAGTTaGTGCGCCGCCGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSCTARS*CAAGRA
Trigger: CGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCA...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AGCTCTGCACGCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTGCCCACAACAGAGATaGCTGGTGGGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSARVDGYRAASTRRHQHCPQQR*LVGLAA
Trigger: AGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCA...ATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCCAGAACGCTGCCATTGGTGCTaGTGCTGCTACTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AGDHAKKPFLLLPLARPERCHWC*CCYCRR
Trigger: CCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCG...TTCTGGCCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTGCTCAGCTGGCCTGGTaGTCCCTCCCCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFAQLAW*SLPFCE
Trigger: CTCACAGAAGGGGAGGGAGCACCAGGCCAGCTGAGC...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCCGAGGCTCGACATGGTaGGGCCGAGGCCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSRGSTW*GRGPDP
Trigger: GGGGTCTGGGCCTCGGCCCCACCATGTCGAGCCTCG...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTCCAGGTCATGCCCATTaGCCAACAGGGAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFPGHAH*PTGRQR
Trigger: CCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGG...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCCTTGCTCAGCAGGCTaGCCACAGCACCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGPCSAG*PQHHFC
Trigger: ACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAATGCACTGCTCGCAGTTaGTGCGCCGCCGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYECTARS*CAAGRA
Trigger: CGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCA...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATTGGAAATATCGAGATGGGGCTCCCCAGATCGCAATGGATAAACGAACAGAACGGCGGGGCAGGGAGCTaGGCTCCGCTCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: IGNIEMGLPRSQWINEQNGGAGS*APLWAP
Trigger: TGGTGCCCAGAGCGGAGCGCAGCTCCCTGCCCCGCC...GTTCTGTTCGTTTATCCATTGCGATCTGGGGAGCCCCATCTCGATATTTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGCTGCCTTTGGGCCACTaGTGCCACTGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: AWMDTERLLHGAINILFMLPLGH*CHCHRC
Trigger: GCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAG...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGCAGCTGTCCCTCGGCTaGCAGCTCCGTGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVQLSLG*QLRGPL
Trigger: GAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTG...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AGCTCTGCACGCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTTCGCCCGAATCCCTTaGTGGAGACCACACGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSARVDGYRAASTRRHQHFARIP*WRPHEQ
Trigger: CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAA...ATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGGGTTCTAAAGACGGGTaGATCCGTTTGTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGGSKDG*IRLSSP
Trigger: GGGCGAAGACAAACGGATGCACCCGTCTTTAGAACC...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCCGCCGCCGTCACTaGAACCACCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TERLLHGAINILFMNVSGFRRRH*NHRKAA
Trigger: AGCCGCCTTCCGGTGGTTTCAGTGACGGCGGCGGAA...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCGCCACTACCACCACTaGTGCCAAAAGAAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGRHYHH*CQKKSS
Trigger: ACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGGCTGCCAGCTCCGTaGCCCGCTCTGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYERLPAP*PALPCS
Trigger: TGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCG...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CAA 72 bp AAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCAGTGACATTGCACGGA +
Preference number: 4 (lower is better)
Translates to: KTGASVCLRPNP*LETTRAVTLHG
Trigger: TCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCCCTTTGGGCCACTGCTaGCACTGCCACCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSPLGHC*HCHRCH
Trigger: ATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGG...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGCTGCCTTTGGGCCACTaGTGCCACTGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVLPLGH*CHCHRC
Trigger: GCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAG...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGGCGGCAGCCACCACTaGACTCTTGTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSGGSHH*TLVCCS
Trigger: GGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCC...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGCTCCGCCCATCATGCTaGCACCGCCACTACCACCAC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSLRPSC*HRHYHH
Trigger: GTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAG...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTCAGGGAGGCAGCGGCTaGAGCCGCAGTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIQGGSG*SRSGLV
Trigger: GACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTG...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTCTCCGTGGCCCGCTCTaGCTTGCTCAGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLILRGPL*LAQQAG
Trigger: GCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAG...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AAATATCGAGATGGGGCTCCCCAGATCGCAATGGATAAACGAACAGAACTTTCACAGCTGTCCCTCGGCTaGCAGCTCCGTGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KYRDGAPQIAMDKRTELSQLSLG*QLRGPL
Trigger: GAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTG...TGAAAGTTCTGTTCGTTTATCCATTGCGATCTGGGGAGCCCCATCTCGATATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGGACTGCGCAAACTGCTaGAGCGTCAGCTGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: AWMDTERLLHGAINILFMDCANC*SVSCPS
Trigger: CGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTC...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGAGGGCTTCGGCACCTaGCACAGCCTCCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSEGFGT*HSLHVR
Trigger: CCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTC...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGAGAGGCCAGCTCTCCCTaGATGGGGTACTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TERLLHGAINILFMNVSGEASSP*MGYSAR
Trigger: CCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTC...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCGAGGCCAGCTCTCCCTaGATGGGGTACTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSEASSP*MGYSAR
Trigger: CCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTC...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGGGCAGGGCGCGCACATaGCGCAGCGTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVGRART*RSVSAS
Trigger: AGAAGCGGAAACGCTGCGGCATGTGCGCGCCCTGCC...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCAGCTGCGCTCCGCTCTaGGCACCACCGCCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ICERIFLVLKTGASVCLRSCAPL*APPPRC
Trigger: GCACCGCGGCGGTGGTGCCCAGAGCGGAGCGCAGCT...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACGCCGAGGCTCGACATaGTGGGGCCGAGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESRRGST*WGRGPD
Trigger: GTCTGGGCCTCGGCCCCACCATGTCGAGCCTCGGCG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGTTTTGTCCACCGCCATaGCCGCCGCCAGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSFCPPP*PPPGHA
Trigger: GGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAA...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCCTTGCTCAGCAGGCTaGCCACAGCACCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARPCSAG*PQHHFC
Trigger: ACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGG...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTCTCTGCACGCGTGGATaGATACAGAGCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFLCTRG*IQSGFY
Trigger: GTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAG...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGACCAGTCTCGGGACTGTaGGTGCAGCTCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TERLLHGAINILFMNVSGPVSGL*VQLSWP
Trigger: AGGCCAGCTGAGCTGCACCCACAGTCCCGAGACTGG...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTGTGTCATCTGCCACTaGGGCTGGTGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPCVICH*GWCGGS
Trigger: GCTGCCGCCGCACCAGCCTCAGTGGCAGATGACACA...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATCTTCTTGCCGGAGCTaGTGGCAGAGGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TERLLHGAINILFMNVSGSSCRS*WQRPAL
Trigger: GAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGA...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTTTCCGCCGCCGTCACTaGAACCACCGGAAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIFRRRH*NHRKAA
Trigger: AGCCGCCTTCCGGTGGTTTCAGTGACGGCGGCGGAA...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGCGCCAGTGCCGCCTCTaGTGCCGCCGCCTCTACATC +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKRQCRL*CRRLYI
Trigger: GATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCG...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGACCAGGACCTGGCCCTaGTGCCCACAACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSTRTWP*CPQQRC
Trigger: GCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGT...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGGGAGCCTGCCAACTaGCGAGGGTCCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVREPAN*RGSTDQ
Trigger: CTGGTCTGTGGACCCTCGGCAGTTGGCAGGCTCCCT...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTTGCTGCTGCTGCTACTaGCGCCGGCATCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLICCCCY*RRHPGS
Trigger: GCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCA...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTGGCCACTGCTGCCACTaGCACCGCTGCCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIGHCCH*HRCHWC
Trigger: GCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCC...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAAGGCGGCAGCCACCACTaGACTCTTGTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYEGGSHH*TLVCCS
Trigger: GGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCC...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGTAPLL*FEVGLL
Trigger: AAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGT...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCGACTGCGCAAACTGCTaGAGCGTCAGCTGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSDCANC*SVSCPS
Trigger: CGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTC...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTGGACTGCGCAAACTaGTGCAGCGTCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSVDCAN*CSVSCP
Trigger: GGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCAC...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCAGCGGGAGATGCTCCTaGACCACGCGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSSGRCS*TTRFSI
Trigger: GATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCT...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCTCTCTACACAAAAACTaGATCTCCTGCACAGACAAC +
Preference number: 4 (lower is better)
Translates to: RPNPLLETTRAVTLHGEGSLHKN*ISCTDN
Trigger: GTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGA...GCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTCGAGGCTCGACATGGTaGGGCCGAGGCCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLRGSTW*GRGPDP
Trigger: GGGGTCTGGGCCTCGGCCCCACCATGTCGAGCCTCG...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCCGGAGAGGGCAGCTTTaGGTTCCGCCGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPRRGQL*VPPPSL
Trigger: CAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCG...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGTGTGTCATCTGCCACTaGGGCTGGTGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKCVICH*GWCGGS
Trigger: GCTGCCGCCGCACCAGCCTCAGTGGCAGATGACACA...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGGACCTGGCCCTGCTaGCCACAACAGAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVRTWPC*PQQRCL
Trigger: CAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCT...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGTGCTGCTGCTGCTACTaGCGCCGGCATCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKCCCCY*RRHPGS
Trigger: GCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCA...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCGCCACTACCACCACTaGTGCCAAAAGAAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARRHYHH*CQKKSS
Trigger: ACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCG...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGGTGGACTGCGCAAACTaGTGCAGCGTCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVVDCAN*CSVSCP
Trigger: GGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCAC...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACTCATCAGCGGGAGATaGTCCTGCACCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYELISGR*SCTTRF
Trigger: GAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAG...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGGGCAGGGCGCGCACATaGCGCAGCGTTTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKGRART*RSVSAS
Trigger: AGAAGCGGAAACGCTGCGGCATGTGCGCGCCCTGCC...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGCCGAGGCTCGACATaGTGGGGCCGAGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLYEREWILQANYALFHGRRGST*WGRGPD
Trigger: GTCTGGGCCTCGGCCCCACCATGTCGAGCCTCGGCG...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATTGGAAATATCGAGATGGGGCTCCCCAGATCGCAATGGATAAACGAACAGAACCCAGGTCATGCCCATTaGCCAACAGGGAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IGNIEMGLPRSQWINEQNPGHAH*PTGRQR
Trigger: CCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGG...GTTCTGTTCGTTTATCCATTGCGATCTGGGGAGCCCCATCTCGATATTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp GCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGCCAGAACATAATGAAGAGGCCTaGGTTGATGGGGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: AGDHAKKPFLLLPLARPEHNEEA*VDGESA
Trigger: GGCGCTTTCCCCATCAACCCAGGCCTCTTCATTATG...TTCTGGCCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAAATCACTGTTGGGGTaGGGGATCCCAGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: AWMDTERLLHGAINILFMKSLLG*GIPVSG
Trigger: TCCCGAGACTGGGATCCCCCACCCCAACAGTGATTT...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCTCCCCAGATCGCAATaGATAAACGAACAGAACTTT +
Preference number: 4 (lower is better)
Translates to: SPESLAGDHTSSDIARRGLPRSQ*INEQNF
Trigger: AAAGTTCTGTTCGTTTATCCATTGCGATCTGGGGAG...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGAAAAGTAGCCAGGATTaGAAATATCGAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQKSSQD*KYRDGA
Trigger: AGCCCCATCTCGATATTTCCAATCCTGGCTACTTTT...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCTGCACTCTTGTCTGCTaGTCCTGCCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSCTLVC*SCLWAT
Trigger: AGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCA...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCACTCTCCGCCCATCATaGTGCCACCGCCACTACCAC +
Preference number: 4 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPTLRPS*CHRHYH
Trigger: GTGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGT...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGGAGGGCTTCGGCACCTaGCACAGCCTCCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKEGFGT*HSLHVR
Trigger: CCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTC...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCGGCCAGGAACACACCTaGCGGGGTCATAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSGQEHT*RGHNEE
Trigger: CTCTTCATTATGACCCCGGCAGGTGTGTTCCTGGCC...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCAACAGAGATGCCTGGTaGGCCTCGCTGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPNRDAW*ASLLRA
Trigger: TGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTT...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGGCTTCAGCATCTCTGTaGACTGCGCAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AWMDTERLLHGAINILFMASASL*TAQTAA
Trigger: TGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGC...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCCGGAGAGGGCAGCTTTaGGTTCCGCCGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVRRGQL*VPPPSL
Trigger: CAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCG...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGCTCTGCACGCGTGGATaGATACAGAGCGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSLCTRG*IQSGFY
Trigger: GTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAG...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACCAGTCTCGGGACTGTaGGTGCAGCTCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESPVSGL*VQLSWP
Trigger: AGGCCAGCTGAGCTGCACCCACAGTCCCGAGACTGG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTACCACTTTTGTGCTTTaGGGTAGGGTTGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFTTFVL*GRVAFV
Trigger: GACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGT...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCATGCCCACAACAGAGATaGCTGGTGGGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESCPQQR*LVGLAA
Trigger: AGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCA...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAGGACCTGGCCCTGCTaGCCACAACAGAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKRTWPC*PQQRCL
Trigger: CAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCT...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCAACCAGGACCTGGCCCTaGTGCCCACAACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESTRTWP*CPQQRC
Trigger: GCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGT...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCAGGGAGCCTGCCAACTaGCGAGGGTCCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVREPAN*RGSTDQ
Trigger: CTGGTCTGTGGACCCTCGGCAGTTGGCAGGCTCCCT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTACTGCAGAGGGAGCCTaGCAACTGCCGAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLTAEGA*QLPRVH
Trigger: GTGGACCCTCGGCAGTTGGCAGGCTCCCTCTGCAGT...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAATGCACTCTTGTCTGCTaGTCCTGCCTTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYECTLVC*SCLWAT
Trigger: AGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCA...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGACTCTCCGCCCATCATaGTGCCACCGCCACTACCAC +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKTLRPS*CHRHYH
Trigger: GTGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGT...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCTCCGTGGCCCGCTCTaGCTTGCTCAGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFLRGPL*LAQQAG
Trigger: GCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGCATCTCTGTGGACTaGGCAAACTGCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVSISVD*ANCCSV
Trigger: GACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCT...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AAATATCGAGATGGGGCTCCCCAGATCGCAATGGATAAACGAACAGAACTTTCAAGCGGGAGATGCTCCTaGACCACGCGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KYRDGAPQIAMDKRTELSSGRCS*TTRFSI
Trigger: GATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCT...TGAAAGTTCTGTTCGTTTATCCATTGCGATCTGGGGAGCCCCATCTCGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR GCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGGGCCAGGAACACACCTaGCGGGGTCATAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVGQEHT*RGHNEE
Trigger: CTCTTCATTATGACCCCGGCAGGTGTGTTCCTGGCC...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTCTACAACTGCTGCACTaGTCGCAGTTGATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: NCISCTDNIDIDTGRKLILQLLH*SQLMRR
Trigger: GCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAG...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCGGTTCTAAAGACGGGTaGATCCGTTTGTCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSGSKDG*IRLSSP
Trigger: GGGCGAAGACAAACGGATGCACCCGTCTTTAGAACC...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACCCTGCTGGCAGCTCTaGACGCGTGGATGGATACAG +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESPCWQL*TRGWIQ
Trigger: CTGTATCCATCCACGCGTGCAGAGCTGCCAGCAGGG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCGCTCAGCTGGCCTGGTaGTCCCTCCCCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVAQLAW*SLPFCE
Trigger: CTCACAGAAGGGGAGGGAGCACCAGGCCAGCTGAGC...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCAACTTTCCGCCGACTTaGAGCGAACTCCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVNFPPT*SELRPR
Trigger: CCGGGGCCGGAGTTCGCTGCAAGTCGGCGGAAAGTT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511048.1
CDS-3UTR CCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCGGCTGCCAGCTCCGTaGCCCGCTCTGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFRLPAP*PALPCS
Trigger: TGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTCTGAATTTGCAAATCTaGTGGCCAGTCTTTCGATTC +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFLNLQI*WPVFRF
Trigger: GAATCGAAAGACTGGCCATCAGATTTGCAAATTCAG...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCGCTGCCATTGGTGCTaGTGCTGCTACTGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFRCHWC*CCYCRR
Trigger: CCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCCTCATCAGCGGGAGATaGTCCTGCACCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVLISGR*SCTTRF
Trigger: GAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAG...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTTCTCTACACAAAAACTaGATCTCCTGCACAGACAAC +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFSLHKN*ISCTDN
Trigger: GTTGTCTGTGCAGGAGATGCAGTTTTTGTGTAGAGA...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTTCTCCAGGCAAACTATaGACTATTTCATGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: NPLLETTRAVTLHGEGSFSPGKL*TISWSE
Trigger: TTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGA...AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVGQVSR*KCLHSA
Trigger: AGCCGAGTGAAGACATTTCCACCTGGACACCTGACC...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CCA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTCACAACAGAGATGCCTaGTGGGCCTCGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLHNRDA*WASLLR
Trigger: CCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTG...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCCACAACAGAGATGCCTaGTGGGCCTCGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVHNRDA*WASLLR
Trigger: CCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTG...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTGCCACCGCTGCCATTaGTGCTGCTGCTGCTACTGC +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVCHRCH*CCCCYC
Trigger: GCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCA...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTTTTGTCCACCGCCATaGCCGCCGCCAGGTCATGCC +
Preference number: 4 (lower is better)
Translates to: SLYEREWILQANYALFHGFCPPP*PPPGHA
Trigger: GGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAA...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGGCAGCTCTGCACGCGTaGATGGATACAGAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKAALHA*MDTERL
Trigger: AAGCCGCTCTGTATCCATCCACGCGTGCAGAGCTGC...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCCAAAATCACTGTTaGGGTGGGGGATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TERLLHGAINILFMNVSGFQNHC*GGGSQS
Trigger: AGACTGGGATCCCCCACCCCAACAGTGATTTTGGAA...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CAA 72 bp GAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTTGCTGGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: ENIFGSKDGCIR*SSPESLAGDHT
Trigger: CGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ICERIFLVLKTGASVCLRRPHEQ*HCTERA
Trigger: TGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCT...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVRPHEQ*HCTERA
Trigger: TGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCCTTTGGGCCACTGCTaGCACTGCCACCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFPLGHC*HCHRCH
Trigger: ATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACACTACCACCACTGCTaGCAAAAGAAGAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYEHYHHC*QKKSSG
Trigger: CCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTG...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCTACAACTGCTGCACTaGTCGCAGTTGATGCGCCGC +
Preference number: 4 (lower is better)
Translates to: ICERIFLVLKTGASVCLRLQLLH*SQLMRR
Trigger: GCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAG...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTCTCAGGGCAGGCACATaGTCAGGTGTCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLLRAGT*SGVQVE
Trigger: TTCCACCTGGACACCTGACCATGTGCCTGCCCTGAG...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAAATCACTGTTGGGGTaGGGGATCCCAGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKKSLLG*GIPVSG
Trigger: TCCCGAGACTGGGATCCCCCACCCCAACAGTGATTT...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp CGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGATTCTCCACACAGGAAGGAAACTaGTTGTCCATTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLHGAINILFMNVSGFSTQEGN*LSILCP
Trigger: TGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGT...GGAGAATCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCAGCATCTCTGTGGACTaGGCAAACTGCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVSISVD*ANCCSV
Trigger: GACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGTTGGAAATATCGAGATaGGGCTCCCCAGATCGCAAT +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVLEISR*GSPDRN
Trigger: ATTGCGATCTGGGGAGCCCCATCTCGATATTTCCAA...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR TCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAAACCACTTTTGTGCTTTaGGGTAGGGTTGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYETTFVL*GRVAFV
Trigger: GACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGT...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACACTACCACCACTGCTaGCAAAAGAAGAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESHYHHC*QKKSSG
Trigger: CCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTCATAATGAAGAGGCCTaGGTTGATGGGGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLHNEEA*VDGESA
Trigger: GGCGCTTTCCCCATCAACCCAGGCCTCTTCATTATG...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCGCAGCTCTGCACGCGTaGATGGATACAGAGCGGCTT +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFAALHA*MDTERL
Trigger: AAGCCGCTCTGTATCCATCCACGCGTGCAGAGCTGC...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACTGAATTTGCAAATCTaGTGGCCAGTCTTTCGATTC +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYELNLQI*WPVFRF
Trigger: GAATCGAAAGACTGGCCATCAGATTTGCAAATTCAG...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR TCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCAACACAGGAAGGAAACTaGTTGTCCATTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESTQEGN*LSILCP
Trigger: TGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGT...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCGCTTCAGCATCTCTGTaGACTGCGCAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFASASL*TAQTAA
Trigger: TGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGC...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACTTTATGAACGTGAGTaGATTCTCCAGGCAAACTAT +
Preference number: 4 (lower is better)
Translates to: VDGYRAASTRRHQHSLYELYERE*ILQANY
Trigger: ATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAG...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp ATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGCTTTATGAACGTGAGTaGATTCTCCAGGCAAACTAT +
Preference number: 4 (lower is better)
Translates to: MDTERLLHGAINILFMNVLYERE*ILQANY
Trigger: ATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAG...CACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTTCCAAAATCACTGTTaGGGTGGGGGATCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLYEREWILQANYALFHGFQNHC*GGGSQS
Trigger: AGACTGGGATCCCCCACCCCAACAGTGATTTTGGAA...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
3UTR CAA 72 bp GACATCGACACAGGAAGGAAACTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCT +
Preference number: 4 (lower is better)
Translates to: DIDTGRKLIVHS*PRKSRYFIDSS
Trigger: AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLYEREWILQANYALFHGTAPLL*FEVGLL
Trigger: AAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGT...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR GCA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTCTCCAGGCAAACTATaGACTATTTCATGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVSPGKL*TISWSE
Trigger: TTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGA...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFGQVSR*KCLHSE
Trigger: TTCAGAGTGAAGACATTTCCACCTGGACACCTGACC...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511048.1
CDS-3UTR CCA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACTATGCACTATTTCATaGTCGGAAAGAATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: REWILQANYALFHGRKESLCTIS*SERIKG
Trigger: TCCTTTGATTCTTTCCGACCATGAAATAGTGCATAG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CCA 90 bp AACATTCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCCTATGCACTATTTCATaGTCGGAAAGAATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NILFMNVSGFSRQTMHYFLCTIS*SERIKG
Trigger: TCCTTTGATTCTTTCCGACCATGAAATAGTGCATAG...GAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGAATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS GCA 90 bp TCGCTCGGCTCGGGCGTCTGCTCTTGCCGCCAGTGCCGCCTCTGCTaGCGCCGCCTCTACATCCCCGCTCAGGCTCAGCCGCCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: SLGSGVCSCRQCRLC*RRLYIPAQAQPPLP
Trigger: CGGCAGAGGCGGCTGAGCCTGAGCGGGGATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 90 bp CTGCCGCTCTTCTCGCTCGGCTCGGGCGTCTGCTCTTGCCGCCAGTaGCGCCTCTGCTGCCGCCGCCTCTACATCCCCGCTCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LPLFSLGSGVCSCRQ*RLCCRRLYIPAQAQ
Trigger: CTGAGCCTGAGCGGGGATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 90 bp TGGGCAGGGCTGGGACGCGGGGCCCGGCTTCAGGGGATAAGGCTCTaGCGCTCTTCTCGCTCGGCTCGGGCGTCTGCTCTTGCCGCCAGT +
Preference number: 5 (lower is better)
Translates to: WAGLGRGARLQGIRL*RSSRSARASALAAS
Trigger: ACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAGAGCCTTATCCCCTGAAGCCGGGCCCCGCGTCCCAGCCCTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS CCA 90 bp CCGGGGTCCCTCTGCCCAGCTTGCCCGGAAGCTGCACGTCTCCAGTaGGTCAGCACTGACGTCAGCAAGACTGGCCGGGCGTGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PGSLCPACPEAARLQ*VSTDVSKTGRAWSP
Trigger: CGGGCTCCACGCCCGGCCAGTCTTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAAGCTGGGCAGAGGGACCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520967.1
CDS TCA 90 bp CTGCCCAGCTTGCCCGGAAGCTGCACGTCTCCAGTGGGTCAGCACTaGCGTCAGCAAGACTGGCCGGGCGTGGAGCCCGCCACCTCCGGA +
Preference number: 5 (lower is better)
Translates to: LPSLPGSCTSPVGQH*RQQDWPGVEPATSG
Trigger: TCCGGAGGTGGCGGGCTCCACGCCCGGCCAGTCTTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAAGCTGGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520967.1
CDS GCA 90 bp GATAAGGCTCTGCCGCTCTTCTCGCTCGGCTCGGGCGTCTGCTCTTaGCGCCAGTGCCGCCTCTGCTGCCGCCGCCTCTACATCCCCGCT +
Preference number: 5 (lower is better)
Translates to: DKALPLFSLGSGVCS*RQCRLCCRRLYIPA
Trigger: AGCGGGGATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAGAGCCTTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 90 bp GGGAGCCTGCCAACTGCCGAGGGTCCACAGACCAGGACCTGGCCCTaGTGCCCACAACAGAGATGCCTGGTGGGCCTCGCTGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSLPTAEGPQTRTWP*CPQQRCLVGLAAQG
Trigger: GCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGACCCTCGGCAGTTGGCAGGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS CCA 90 bp CTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCCACCGCTGCCATTaGTGCTGCTGCTGCTACTGCCGCCGGCATCCTGGGAGCCACCGC +
Preference number: 5 (lower is better)
Translates to: LLLPLGHCCHCHRCH*CCCCYCRRHPGSHR
Trigger: GCGGTGGCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 90 bp TCAGGGGATAAGGCTCTGCCGCTCTTCTCGCTCGGCTCGGGCGTCTaGTCTTGCCGCCAGTGCCGCCTCTGCTGCCGCCGCCTCTACATC +
Preference number: 5 (lower is better)
Translates to: SGDKALPLFSLGSGV*SCRQCRLCCRRLYI
Trigger: GATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAGAGCCTTATCCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 90 bp GAGGTAGGGTTGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATaGCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: EVGLLLSTAMAAARS*PLANREAAAAAAVA
Trigger: GGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS GCA 90 bp CTCTGTGGACTGCGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTaGCAGCTCCGTGGCCCGCTCTGCCTTGCTCAGCAGGCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LCGLRKLLQRQLSLG*QLRGPLCLAQQAGH
Trigger: GTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
CDS GCA 90 bp TGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCCACCGCTaGCATTGGTGCTGCTGCTGCTACTGCCGCCGGCATCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CLLLLPLGHCCHCHR*HWCCCCYCRRHPGS
Trigger: GCTCCCAGGATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 90 bp TGCTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTaGTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: CSCTTRFSISVDCAN*CSVSCPSAASSVAR
Trigger: GCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS GCA 90 bp GCCCAGGTAGGGGAAGTCGGACTGGCCATTGAGGGCTTCGGCACCTaGCACAGCCTCCATGTCAGGCAGGCCAGCACCCGCCTCGCTCAT +
Preference number: 5 (lower is better)
Translates to: AQVGEVGLAIEGFGT*HSLHVRQASTRLAH
Trigger: ATGAGCGAGGCGGGTGCTGGCCTGCCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTTCCCCTACCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS CCA 90 bp GGTCATGCCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTaGCCTTGTCAGCAGACTCTCCGCCCATCATGCTGCCACCGCCAC +
Preference number: 5 (lower is better)
Translates to: GHAHWPTGRQRLQPQ*PCQQTLRPSCCHRH
Trigger: GTGGCGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS CCA 90 bp GGTTGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTaGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: GCFCPPPWPPPGHAH*PTGRQRLQPQWPCQ
Trigger: CTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS CCA 90 bp GCGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTaGCCCGCTCTGCCTTGCTCAGCAGGCTGGCCACAGCACCACTTT +
Preference number: 5 (lower is better)
Translates to: AQTAAASAVPRLPAP*PALPCSAGWPQHHF
Trigger: AAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
CDS GCA 90 bp GAGGGTCCACAGACCAGGACCTGGCCCTGCTGCCCACAACAGAGATaGCTGGTGGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: EGPQTRTWPCCPQQR*LVGLAAQGRHMVRC
Trigger: ACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGACCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 90 bp TCCTGCACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTGCTaGAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SCTTRFSISVDCANC*SVSCPSAASSVARS
Trigger: AGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS GCA 90 bp TTCCGCTTCTTCTTGCCGGAGCTGATGGCAGAGGCCAGCTCTCCCTaGATGGGGTACTCAGCCAGGCCCGCCATGTGCAGCGCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: FRFFLPELMAEASSP*MGYSARPAMCSALS
Trigger: CGAGAGCGCGCTGCACATGGCGGGCCTGGCTGAGTACCCCATGCAGGGAGAGCTGGCCTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS CCA 90 bp CACAGACCAGGACCTGGCCCTGCTGCCCACAACAGAGATGCCTGGTaGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HRPGPGPAAHNRDAW*ASLLRAGTWSGVQV
Trigger: CACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS CCA 90 bp GTCCACAGACCAGGACCTGGCCCTGCTGCCCACAACAGAGATGCCTaGTGGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VHRPGPGPAAHNRDA*WASLLRAGTWSGVQ
Trigger: CTGGACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS-3UTR CAA 90 bp CGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCGCAGCCGCAGTGGCCTaGTCAGCAGACTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: RPNPLLETTRAVTLHGEGAAAVA*SADSPP
Trigger: GGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGC...GCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS GCA 90 bp CTGCACTCTTGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCACTaGCACCGCTGCCATTGGTGCTGCTGCTGCTACTGCCGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: LHSCLLLLPLGHCCH*HRCHWCCCCYCRRH
Trigger: ATGCCGGCGGCAGTAGCAGCAGCAGCACCAATGGCAGCGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 90 bp CAGCAGACTCTCCGCCCATCATGCTGCCACCGCCACTACCACCACTaGTGCCAAAAGAAGAGTAGTGGGAGAGCGGGCGGGAGCGGCGCA +
Preference number: 5 (lower is better)
Translates to: QQTLRPSCCHRHYHH*CQKKSSGRAGGSGA
Trigger: TGCGCCGCTCCCGCCCGCTCTCCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000504944.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS GCA 90 bp AGCGGGAGATGCTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTaGGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SGRCSCTTRFSISVD*ANCCSVSCPSAASS
Trigger: GGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS GCA 90 bp TCAGGCAGGCCAGCACCCGCCTCGCTCATCAGCGGGAGATGCTCCTaGACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: SGRPAPASLISGRCS*TTRFSISVDCANCC
Trigger: GCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAGCGAGGCGGGTGCTGGCCTGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS CCA 90 bp GGTGGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCGGCTCTCCGAGTCGTCCAAGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: GGPRCSGQAHGQVSR*KCLHSALRVVQAAT
Trigger: GGTGGCGGCTTGGACGACTCGGAGAGCCGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000504844.1
CDS CCA 90 bp GCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTaGGTTCCGCCGCCGTCACTGAAACCACCGGAAGGCGGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: AGDHTSSDIARRGQL*VPPPSLKPPEGGSR
Trigger: ACGGGAGCCGCCTTCCGGTGGTTTCAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS-3UTR CAA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGGCAGCCGCAGTGGCCTaGTCAGCAGACTCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: SPESLAGDHTSSDIARRGAAAVA*SADSPP
Trigger: GGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGC...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTGTGGCCCGCTCTGCCTaGCTCAGCAGGCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSAVARSA*LSRLAT
Trigger: TGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCAC...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS TCA 90 bp GTGACATTGCACGGAGAGGGCAGCTTTGGGTTCCGCCGCCGTCACTaGAACCACCGGAAGGCGGCTCCCGTCGGAAGCATCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VTLHGEGSFGFRRRH*NHRKAAPVGSITFS
Trigger: GGAGAAGGTGATGCTTCCGACGGGAGCCGCCTTCCGGTGGTTTCAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS GCA 90 bp GCCCGCTCTGCCTTGCTCAGCAGGCTGGCCACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTTTTGTCCACCGCCATGGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ARSALLSRLATAPLL*FEVGLLLSTAMAAA
Trigger: GGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS GCA 90 bp TCCATGTCAGGCAGGCCAGCACCCGCCTCGCTCATCAGCGGGAGATaGTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAAC +
Preference number: 5 (lower is better)
Translates to: SMSGRPAPASLISGR*SCTTRFSISVDCAN
Trigger: GTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAGCGAGGCGGGTGCTGGCCTGCCTGACATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS-3UTR CAA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTGCCAGGTCATGCCCATaGGCCAACAGGGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSAARSCP*ANREAA
Trigger: CGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGC...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGACGGAGAGGGCAGCTTaGGGTTCCGCCGCCGTCACT +
Preference number: 5 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQTERAA*GSAAVT
Trigger: AGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGT...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS GCA 90 bp GACCTGGCCCTGCTGCCCACAACAGAGATGCCTGGTGGGCCTCGCTaGTCAGGGCAGGCACATGGTCAGGTGTCCAGGTGGAAATGTCTT +
Preference number: 5 (lower is better)
Translates to: DLALLPTTEMPGGPR*SGQAHGQVSRWKCL
Trigger: AAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS TCA 90 bp CCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTaGCATTGCACGGAGAGGGCAGCTTTGGGTTCCGCCGCCGTCACT +
Preference number: 5 (lower is better)
Translates to: PFVFARIPCWRPHEQ*HCTERAALGSAAVT
Trigger: AGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS-3UTR CAA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGATGAAGAGGCCTGGGTaGATGGGGAAAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQMKRPG*MGKAPR
Trigger: CCTGGGCGCTTTCCCCATCAACCCAGGCCTCTTCAT...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGCTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCA +
Preference number: 5 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQLRPNP*LETTRA
Trigger: TGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAG...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTGCCACCACTGCACTCTaGTCTGCTGCTCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSAATTAL*SAAPAF
Trigger: AAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGC...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AATCACTGTTGGGGTGGGGGATCCCAGTCTCGGGACTGTGGGTGCAGCTCAGCTCGTTTCCGCTTCTTCTaGCCGGAGCTGATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: NHCWGGGSQSRDCGCSSARFRFF*PELMAE
Trigger: CTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAAACG...AGCTGAGCTGCACCCACAGTCCCGAGACTGGGATCCCCCACCCCAACAGTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp ACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAACGTGAGTGGACTGCACTGCTCGCAGTaGATGCGCCGCCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TERLLHGAINILFMNVSGLHCSQ*MRRRQG
Trigger: GCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAG...TCCACTCACGTTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp TCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATTGCACGGAGAGGGACACGAGCAGTGACATaGCACGGAGAGGGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SPESLAGDHTSSDIARRGTRAVT*HGEGSF
Trigger: AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGT...CCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AGCTCTGCACGCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATCTTCGCCCGAATCCCTaGCTGGAGACCACACGAGCA +
Preference number: 5 (lower is better)
Translates to: SSARVDGYRAASTRRHQHLRPNP*LETTRA
Trigger: TGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAG...ATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGCGTGCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS TCA 90 bp GATCGCTTGAGCTCAGGAGTTTTGAGACCACCCTGGACAACATGGTaGAACTCTATCTCGGCTCTCCGAGTCGTCCAAGCCGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: DRLSSGVLRPPWTTW*NSISALRVVQAATA
Trigger: GGCGGTGGCGGCTTGGACGACTCGGAGAGCCGAGATAGAGTTTCACCATGTTGTCCAGGGTGGTCTCAAAACTCCTGAGCTCAAGCGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507139.5
CDS-3UTR CAA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTCTGCACTGCTCGCAGTaGATGCGCCGCCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: NCISCTDNIDIDTGRKLILHCSQ*MRRRQG
Trigger: GCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAG...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CCACCAGCAGGGGACCACGCAAAGAAGCCCTTTCTTCTGTTGCCATTAGCAAGGGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTT +
Preference number: 5 (lower is better)
Translates to: PPAGDHAKKPFLLLPLARDGCIR*SSPESL
Trigger: AAGGGATTCGGGCGAAGACAAACGGATGCACCCGTC...CCTTGCTAATGGCAACAGAAGAAAGGGCTTCTTTGCGTGGTCCCCTGCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CAA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAAACTTTCCGCCGACTaGCAGCGAACTCCGGCCCCG +
Preference number: 5 (lower is better)
Translates to: AWMDTERLLHGAINILFMKLSAD*QRTPAP
Trigger: CGGGGCCGGAGTTCGCTGCAAGTCGGCGGAAAGTTT...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511048.1
CDS-3UTR CAA 90 bp CGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCTGGAGACCACACGAGCAGAAGCCCTTTCTTCTGTaGCCATTAGCAAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RVHPFVFARIPCWRPHEQKPFLL*PLARPE
Trigger: TTCTGGCCTTGCTAATGGCAACAGAAGAAAGGGCTT...CTGCTCGTGTGGTCTCCAGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CAA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAAGAGCGGCGCAGGCTCTaGTTGAGGGGCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: VDGYRAASTRRHQHSLYEERRRL*LRGSLM
Trigger: CATCAGTGAGCCCCTCAACAAGAGCCTGCGCCGCTC...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCGCCAGGTCATGCCCATaGGCCAACAGGGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPARSCP*ANREAA
Trigger: CGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGC...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp ATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGCTGCTGCTCCTGCCTTaGGGCCACTGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: MNVSGFSRQTMHYFMVGKLLLLP*GHCCHC
Trigger: GCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAG...CTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCGTGGCCCGCTCTGCCTaGCTCAGCAGGCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVVARSA*LSRLAT
Trigger: TGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCAC...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTAAGTCGGACTGGCCATaGAGGGCTTCGGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: NCISCTDNIDIDTGRKLIKSDWP*RASAPA
Trigger: GGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AAATATCGAGATGGGGCTCCCCAGATCGCAATGGATAAACGAACAGAACTTTCAGAGCGGCGCAGGCTCTaGTTGAGGGGCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: KYRDGAPQIAMDKRTELSERRRL*LRGSLM
Trigger: CATCAGTGAGCCCCTCAACAAGAGCCTGCGCCGCTC...TGAAAGTTCTGTTCGTTTATCCATTGCGATCTGGGGAGCCCCATCTCGATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS-3UTR CAA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCAGAGGTAGGGTTGCTTTaGTCCACCGCCATGGCCGCC +
Preference number: 5 (lower is better)
Translates to: REWILQANYALFHGRKESEVGLL*STAMAA
Trigger: GGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTC...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp GCGTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGGCCACAGCACCACTTTaGTGCTTTGAGGTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: AWMDTERLLHGAINILFMATAPL*CFEVGL
Trigger: CAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGC...CATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCACGGAGAGGGCAGCTTaGGGTTCCGCCGCCGTCACT +
Preference number: 5 (lower is better)
Translates to: ICERIFLVLKTGASVCLRTERAA*GSAAVT
Trigger: AGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGT...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS CCA 90 bp CATATAATCCCAAAGTGGAAGTTTTCTCCAATTCTTTGGGATTCGTaGGGGCGGATTTGTGCAAGGCCGACCTTCCTCTGCGAGGCGAAG +
Preference number: 5 (lower is better)
Translates to: HIIPKWKFSPILWDS*GRICARPTFLCEAK
Trigger: CTTCGCCTCGCAGAGGAAGGTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAAAACTTCCACTTTGGGATTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS-3UTR CAA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCTGCTGCTCCTGCCTTaGGGCCACTGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: SLYEREWILQANYALFHGLLLLP*GHCCHC
Trigger: GCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAG...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp GTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTTGAGGTAGGGTTGCTTTaGTCCACCGCCATGGCCGCC +
Preference number: 5 (lower is better)
Translates to: VHSLPRKSRYFIDSSLPLEVGLL*STAMAA
Trigger: GGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTC...AAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGACATCGACACAGGAAGGAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGCCACAGCACCACTTTaGTGCTTTGAGGTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: RHRHRKETDCPFFAQEVSATAPL*CFEVGL
Trigger: CAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGC...CGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTCCTTCCTGTGTCGATGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp GAAACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCAAGTCGGACTGGCCATaGAGGGCTTCGGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: ETDCPFFAQEVSVLYRFVKSDWP*RASAPA
Trigger: GGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT...GACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCAATGAAGAGGCCTGGGTaGATGGGGAAAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: REWILQANYALFHGRKESMKRPG*MGKAPR
Trigger: CCTGGGCGCTTTCCCCATCAACCCAGGCCTCTTCAT...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTT +
Preference number: 5 (lower is better)
Translates to: RIFLVLKTGASVCLRPNPDGCIR*SSPESL
Trigger: AAGGGATTCGGGCGAAGACAAACGGATGCACCCGTC...GGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS CCA 90 bp TCCCAACTGCATATAATCCCAAAGTGGAAGTTTTCTCCAATTCTTTaGGATTCGTGGGGGCGGATTTGTGCAAGGCCGACCTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SQLHIIPKWKFSPIL*DSWGRICARPTFLC
Trigger: GCAGAGGAAGGTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAAAACTTCCACTTTGGGATTATATGCAGTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS-3UTR CAA 90 bp GTGGATGGATACAGAGCGGCTTCTACACGGCGCCATCAACATTCTCTTTATGAATGCTTTGAGGTAGGGTaGCTTTTGTCCACCGCCATG +
Preference number: 5 (lower is better)
Translates to: VDGYRAASTRRHQHSLYECFEVG*LLSTAM
Trigger: CATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCA...TTCATAAAGAGAATGTTGATGGCGCCGTGTAGAAGCCGCTCTGTATCCATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp AACTGCATCTCCTGCACAGACAACATCGACATCGACACAGGAAGGAAACTGATTACACGAGCAGTGACATaGCACGGAGAGGGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: NCISCTDNIDIDTGRKLITRAVT*HGEGSF
Trigger: AAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGT...AATCAGTTTCCTTCCTGTGTCGATGTCGATGTTGTCTGTGCAGGAGATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGTTTCCGCTTCTTCTaGCCGGAGCTGATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLYEREWILQANYALFHGRFRFF*PELMAE
Trigger: CTCTGCCATCAGCTCCGGCAAGAAGAAGCGGAAACG...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCTGCTTTGAGGTAGGGTaGCTTTTGTCCACCGCCATG +
Preference number: 5 (lower is better)
Translates to: ICERIFLVLKTGASVCLRCFEVG*LLSTAM
Trigger: CATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCA...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCACTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTAC +
Preference number: 5 (lower is better)
Translates to: REWILQANYALFHGRKESLIVHS*PRKSRY
Trigger: GTACCGAGACTTCCTGGGCAAAGAATGGACAATCAG...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp TCTCTTTATGAACGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTAC +
Preference number: 5 (lower is better)
Translates to: SLYEREWILQANYALFHGLIVHS*PRKSRY
Trigger: GTACCGAGACTTCCTGGGCAAAGAATGGACAATCAG...ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACGTTCATAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp CGTGAGTGGATTCTCCAGGCAAACTATGCACTATTTCATGGTCGGAAAGAATCATGTGAGAGAATATTTTaGGTTCTAAAGACGGGTGCA +
Preference number: 5 (lower is better)
Translates to: REWILQANYALFHGRKESCERIF*VLKTGA
Trigger: TGCACCCGTCTTTAGAACCAAAAATATTCTCTCACA...TGATTCTTTCCGACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCACTCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS-3UTR CAA 90 bp ATCTGTGAGAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCTGTGAGAGAATATTTTaGGTTCTAAAGACGGGTGCA +
Preference number: 5 (lower is better)
Translates to: ICERIFLVLKTGASVCLRCERIF*VLKTGA
Trigger: TGCACCCGTCTTTAGAACCAAAAATATTCTCTCACA...GCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTCTCACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000511048.1
CDS GCA 72 bp TCGGGCGTCTGCTCTTGCCGCCAGTGCCGCCTCTGCTaGCGCCGCCTCTACATCCCCGCTCAGGCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: SGVCSCRQCRLC*RRLYIPAQAQP
Trigger: CGGCTGAGCCTGAGCGGGGATGTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 72 bp CTGCCGCTCTTCTCGCTCGGCTCGGGCGTCTGCTCTTaGCGCCAGTGCCGCCTCTGCTGCCGCCGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: LPLFSLGSGVCS*RQCRLCCRRLY
Trigger: GTAGAGGCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 72 bp AAGGCTCTGCCGCTCTTCTCGCTCGGCTCGGGCGTCTaGTCTTGCCGCCAGTGCCGCCTCTGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: KALPLFSLGSGV*SCRQCRLCCRR
Trigger: GCGGCGGCAGCAGAGGCGGCACTGGCGGCAAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAGAGCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS GCA 72 bp TCGGGGGAACCCGCGCAGCCAAACTTTCCGCCGACTTaGAGCGAACTCCGGCCCCGGCCGCGCACCGAACCC +
Preference number: 6 (lower is better)
Translates to: SGEPAQPNFPPT*SELRPRPRTEP
Trigger: GGGTTCGGTGCGCGGCCGGGGCCGGAGTTCGCTGCAAGTCGGCGGAAAGTTTGGCTGCGCGGGTTCCCCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502336.5
ENST00000520967.1
CDS CCA 72 bp TGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTaGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: CPPPWPPPGHAH*PTGRQRLQPQW
Trigger: CCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS CAA 72 bp TTCGGGGGAACCCGCGCAGCCAAACTTTCCGCCGACTaGCAGCGAACTCCGGCCCCGGCCGCGCACCGAACC +
Preference number: 6 (lower is better)
Translates to: FGGTRAAKLSAD*QRTPAPAAHRT
Trigger: GGTTCGGTGCGCGGCCGGGGCCGGAGTTCGCTGCAAGTCGGCGGAAAGTTTGGCTGCGCGGGTTCCCCCGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502336.5
ENST00000520967.1
CDS GCA 72 bp CTGGGACGCGGGGCCCGGCTTCAGGGGATAAGGCTCTaGCGCTCTTCTCGCTCGGCTCGGGCGTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: LGRGARLQGIRL*RSSRSARASAL
Trigger: AAGAGCAGACGCCCGAGCCGAGCGAGAAGAGCGGCAGAGCCTTATCCCCTGAAGCCGGGCCCCGCGTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302517.8
CDS CAA 72 bp TTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATaGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: LSTAMAAARSCP*ANREAAAAAAV
Trigger: CACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS TCA 72 bp TTGCCCGGAAGCTGCACGTCTCCAGTGGGTCAGCACTaGCGTCAGCAAGACTGGCCGGGCGTGGAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LPGSCTSPVGQH*RQQDWPGVEPA
Trigger: GGCGGGCTCCACGCCCGGCCAGTCTTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520967.1
CDS GCA 72 bp GGCTGGTGCGGCGGCAGCCACCACTGCACTCTTGTCTaGTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: GWCGGSHHCTLV*CSCLWATAATA
Trigger: GGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 72 bp CTGCGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCTaGCAGCTCCGTGGCCCGCTCTGCCTTGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LRKLLQRQLSLG*QLRGPLCLAQQ
Trigger: CTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
CDS CAA 72 bp GCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTaGTCAGCAGACTCTCCGCCCATCATGCTGCCACCG +
Preference number: 6 (lower is better)
Translates to: ANREAAAAAAVA*SADSPPIMLPP
Trigger: CGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS CAA 90 bp GGGTTGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATaGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: GLLLSTAMAAARSCP*ANREAAAAAAVALS
Trigger: TGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS TCA 72 bp CACGGAGAGGGCAGCTTTGGGTTCCGCCGCCGTCACTaGAACCACCGGAAGGCGGCTCCCGTCGGAAGCATC +
Preference number: 6 (lower is better)
Translates to: HGEGSFGFRRRH*NHRKAAPVGSI
Trigger: GATGCTTCCGACGGGAGCCGCCTTCCGGTGGTTTCAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS GCA 72 bp CCAACTGCCGAGGGTCCACAGACCAGGACCTGGCCCTaGTGCCCACAACAGAGATGCCTGGTGGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: PTAEGPQTRTWP*CPQQRCLVGLA
Trigger: AGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCCTGGTCTGTGGACCCTCGGCAGTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS GCA 72 bp CAGCTGTCCCTCGGCTGCCAGCTCCGTGGCCCGCTCTaGCTTGCTCAGCAGGCTGGCCACAGCACCACTTTT +
Preference number: 6 (lower is better)
Translates to: QLSLGCQLRGPL*LAQQAGHSTTF
Trigger: AAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGCGGGCCACGGAGCTGGCAGCCGAGGGACAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS CCA 72 bp GGACCTGGCCCTGCTGCCCACAACAGAGATGCCTGGTaGGCCTCGCTGCTCAGGGCAGGCACATGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GPGPAAHNRDAW*ASLLRAGTWSG
Trigger: ACCTGACCATGTGCCTGCCCTGAGCAGCGAGGCCCACCAGGCATCTCTGTTGTGGGCAGCAGGGCCAGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000507139.5
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000511591.1
ENST00000512816.1
ENST00000520967.1
CDS CCA 72 bp CTCTGCCCAGCTTGCCCGGAAGCTGCACGTCTCCAGTaGGTCAGCACTGACGTCAGCAAGACTGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: LCPACPEAARLQ*VSTDVSKTGRA
Trigger: CGCCCGGCCAGTCTTGCTGACGTCAGTGCTGACCCACTGGAGACGTGCAGCTTCCGGGCAAGCTGGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520967.1
CDS CAA 90 bp TCATCTGCCACTGAGGCTGGTGCGGCGGCAGCCACCACTGCACTCTaGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCACTGCCACCG +
Preference number: 6 (lower is better)
Translates to: SSATEAGAAAATTAL*SAAPAFGPLLPLPP
Trigger: CGGTGGCAGTGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCCTCAGTGGCAGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS CAA 90 bp TGCCCATTGGCCAACAGGGAGGCAGCGGCTGCAGCCGCAGTGGCCTaGTCAGCAGACTCTCCGCCCATCATGCTGCCACCGCCACTACCA +
Preference number: 6 (lower is better)
Translates to: CPLANREAAAAAAVA*SADSPPIMLPPPLP
Trigger: TGGTAGTGGCGGTGGCAGCATGATGGGCGGAGAGTCTGCTGACAAGGCCACTGCGGCTGCAGCCGCTGCCTCCCTGTTGGCCAATGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS GCA 72 bp CCAGCACCCGCCTCGCTCATCAGCGGGAGATGCTCCTaGACCACGCGCTTCAGCATCTCTGTGGACTGCGCA +
Preference number: 6 (lower is better)
Translates to: PAPASLISGRCS*TTRFSISVDCA
Trigger: TGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCATCTCCCGCTGATGAGCGAGGCGGGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS CAA 72 bp ACTGAGGCTGGTGCGGCGGCAGCCACCACTGCACTCTaGTCTGCTGCTCCTGCCTTTGGGCCACTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: TEAGAAAATTAL*SAAPAFGPLLP
Trigger: TGGCAGCAGTGGCCCAAAGGCAGGAGCAGCAGACAAGAGTGCAGTGGTGGCTGCCGCCGCACCAGCCTCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000302517.8
ENST00000502295.1
ENST00000502336.5
ENST00000502716.1
ENST00000503511.1
ENST00000504844.1
ENST00000504944.1
ENST00000509238.1
ENST00000511048.1
ENST00000511457.1
ENST00000512816.1
ENST00000520967.1
CDS TCA 72 bp GGAAAGCGCCCAGGTAGGGGAAGTCGGACTGGCCATTaGGGGCTTCGGCACCTGCCACAGCCTCCATGTCAG +
Preference number: 6 (lower is better)
Translates to: GKRPGRGSRTGH*GLRHLPQPPCQ
Trigger: CTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTTCCCCTACCTGGGCGCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS TCA 72 bp TCTTTCGATTCCTACAACTGCTGCACTGCTCGCAGTTaGTGCGCCGCCGGCAGGGCGCGCACATGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SFDSYNCCTARS*CAAGRARTCRS
Trigger: GCTGCGGCATGTGCGCGCCCTGCCGGCGGCGCATCAACTGCGAGCAGTGCAGCAGTTGTAGGAATCGAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS GCA 72 bp CTCCGCCCATCATGCTGCCACCGCCACTACCACCACTaGTGCCAAAAGAAGAGTAGTGGGAGAGCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LRPSCCHRHYHH*CQKKSSGRAGG
Trigger: CCCGCCCGCTCTCCCACTACTCTTCTTTTGGCAGCAGTGGTGGTAGTGGCGGTGGCAGCATGATGGGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000504944.1
ENST00000511048.1
ENST00000511457.1
ENST00000520967.1
CDS GCA 72 bp ACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTGCTaGAGCGTCAGCTGTCCCTCGGCTGCCAGCTCCGTG +
Preference number: 6 (lower is better)
Translates to: TRFSISVDCANC*SVSCPSAASSV
Trigger: CACGGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS GCA 72 bp ACCACGCGCTTCAGCATCTCTGTGGACTGCGCAAACTaGTGCAGCGTCAGCTGTCCCTCGGCTGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TTRFSISVDCAN*CSVSCPSAASS
Trigger: GGAGCTGGCAGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS GCA 72 bp TGCTCCTGCACCACGCGCTTCAGCATCTCTGTGGACTaGGCAAACTGCTGCAGCGTCAGCTGTCCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: CSCTTRFSISVD*ANCCSVSCPSA
Trigger: AGCCGAGGGACAGCTGACGCTGCAGCAGTTTGCGCAGTCCACAGAGATGCTGAAGCGCGTGGTGCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000511048.1
ENST00000511457.1
ENST00000515038.1
CDS CCA 72 bp CACACGAGCAGTGACATTGCACGGAGAGGGCAGCTTTaGGTTCCGCCGCCGTCACTGAAACCACCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: HTSSDIARRGQL*VPPPSLKPPEG
Trigger: GCCTTCCGGTGGTTTCAGTGACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCCATGGTGCAAGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSMVQAPG
Trigger: GCCCGGGGCTTGCACCATGGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS CAA 72 bp CCGAATCCCTTGCTGGAGACCACACGAGCAGTGACATaGCACGGAGAGGGCAGCTTTGGGTTCCGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: PNPLLETTRAVT*HGEGSFGFRRR
Trigger: ACGGCGGCGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCTCGTGTGGTCTCCAGCAAGGGATTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302517.8
ENST00000511048.1
ENST00000515038.1
CDS CAA 90 bp AGGCTGGCCACAGCACCACTTTTGTGCTTTGAGGTAGGGTTGCTTTaGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTGGCCAAC +
Preference number: 6 (lower is better)
Translates to: RLATAPLLCFEVGLL*STAMAAARSCPLAN
Trigger: GTTGGCCAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS CAA 90 bp CTCAGCAGGCTGGCCACAGCACCACTTTTGTGCTTTGAGGTAGGGTaGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCATTG +
Preference number: 6 (lower is better)
Translates to: LSRLATAPLLCFEVG*LLSTAMAAARSCPL
Trigger: CAATGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCGGCTCTCCGAGTCGTCCAA +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSALRVVQ
Trigger: TTGGACGACTCGGAGAGCCGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302517.8
ENST00000504844.1
CDS CCA 72 bp AAATGTCTTCACTCGTGCCTGTCACCTCTCCGTGGTTaGGGGCAAGCTGTCACAGACCCCAGGAGAGTGCCC +
Preference number: 6 (lower is better)
Translates to: KCLHSCLSPLRG*GQAVTDPRRVP
Trigger: GGGCACTCTCCTGGGGTCTGTGACAGCTTGCCCCCAACCACGGAGAGGTGACAGGCACGAGTGAAGACATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503511.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCGTGCCTGTCACCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSCLSPLR
Trigger: ACGGAGAGGTGACAGGCACGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503511.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCTGAACTTCGGGGGAACCCG +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSELRGNP
Trigger: CGGGTTCCCCCGAAGTTCAGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511048.1
CDS CAA 72 bp CTGGCCACAGCACCACTTTTGTGCTTTGAGGTAGGGTaGCTTTTGTCCACCGCCATGGCCGCCGCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LATAPLLCFEVG*LLSTAMAAARS
Trigger: TGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS CAA 72 bp GAAATGTCTTCACTCGTGCCTGTCACCTCTCCGTGGTaGGGGGCAAGCTGTCACAGACCCCAGGAGAGTGCC +
Preference number: 6 (lower is better)
Translates to: EMSSLVPVTSPW*GASCHRPQESA
Trigger: GGCACTCTCCTGGGGTCTGTGACAGCTTGCCCCCAACCACGGAGAGGTGACAGGCACGAGTGAAGACATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503511.1
CDS CAA 72 bp GTGAAACTCTATCTCGTGCCTGTCACCTCTCCGTGGTaGGGGGCAAGCTGTCACAGACCCCAGGAGAGTGCC +
Preference number: 6 (lower is better)
Translates to: VKLYLVPVTSPW*GASCHRPQESA
Trigger: GGCACTCTCCTGGGGTCTGTGACAGCTTGCCCCCAACCACGGAGAGGTGACAGGCACGAGATAGAGTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502716.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCTGTCACCTCTCCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSVTSPWL
Trigger: CAACCACGGAGAGGTGACAGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511457.1
CDS CAA 72 bp ACAGCACCACTTTTGTGCTTTGAGGTAGGGTTGCTTTaGTCCACCGCCATGGCCGCCGCCAGGTCATGCCCA +
Preference number: 6 (lower is better)
Translates to: TAPLLCFEVGLL*STAMAAARSCP
Trigger: TGGGCATGACCTGGCGGCGGCCATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS GCA 72 bp GCCTTGCTCAGCAGGCTGGCCACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTTTTGTCCACCGCCATG +
Preference number: 6 (lower is better)
Translates to: ALLSRLATAPLL*FEVGLLLSTAM
Trigger: CATGGCGGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302517.8
ENST00000502716.1
ENST00000504844.1
ENST00000511048.1
ENST00000511457.1
CDS CCA 72 bp ATGGTGAAACTCTATCTCGTGCCTGTCACCTCTCCGTaGTTGGGGGCAAGCTGTCACAGACCCCAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: MVKLYLVPVTSP*LGASCHRPQES
Trigger: ACTCTCCTGGGGTCTGTGACAGCTTGCCCCCAACCACGGAGAGGTGACAGGCACGAGATAGAGTTTCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502716.1
CDS CCA 72 bp CGCTGCTCAGGGCAGGCACATGGTCAGGTGTCCAGGTaGAAATGTCTTCACTCTCGACCGATGAAACAGCAT +
Preference number: 6 (lower is better)
Translates to: RCSGQAHGQVSR*KCLHSRPMKQH
Trigger: ATGCTGTTTCATCGGTCGAGAGTGAAGACATTTCCACCTGGACACCTGACCATGTGCCTGCCCTGAGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509238.1
CDS TCA 72 bp AGCTCAGGAGTTTTGAGACCACCCTGGACAACATGGTaGAACTCTATCTCGGCTCTCCGAGTCGTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: SSGVLRPPWTTW*NSISALRVVQA
Trigger: GGCTTGGACGACTCGGAGAGCCGAGATAGAGTTTCACCATGTTGTCCAGGGTGGTCTCAAAACTCCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507139.5
CDS TCA 72 bp AGCTCAGGAGTTTTGAGACCACCCTGGACAACATGGTaGAACTCTATCTCTGAACTTCGGGGGAACCCGCGC +
Preference number: 6 (lower is better)
Translates to: SSGVLRPPWTTW*NSISELRGNPR
Trigger: GCGCGGGTTCCCCCGAAGTTCAGAGATAGAGTTTCACCATGTTGTCCAGGGTGGTCTCAAAACTCCTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502336.5
CDS GCA 72 bp TTCTCCAATTCTTTGGGATTCGTGGGGGCGGATTTGTaGAAGGCCGACCTTCCTCTGCGAGGCGAAGAAAAC +
Preference number: 6 (lower is better)
Translates to: FSNSLGFVGADL*KADLPLRGEEN
Trigger: GTTTTCTTCGCCTCGCAGAGGAAGGTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS CAA 72 bp GTTTTCTCCAATTCTTTGGGATTCGTGGGGGCGGATTaGTGCAAGGCCGACCTTCCTCTGCGAGGCGAAGAA +
Preference number: 6 (lower is better)
Translates to: VFSNSLGFVGAD*CKADLPLRGEE
Trigger: TTCTTCGCCTCGCAGAGGAAGGTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS CAA 90 bp ATCCCAACTGCATATAATCCCAAAGTGGAAGTTTTCTCCAATTCTTaGGGATTCGTGGGGGCGGATTTGTGCAAGGCCGACCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: IPTAYNPKVEVFSNS*GFVGADLCKADLPL
Trigger: CAGAGGAAGGTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAAAACTTCCACTTTGGGATTATATGCAGTTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502295.1
CDS CAA 72 bp GCATATAATCCCAAAGTGGAAGTTTTCTCCAATTCTTaGGGATTCGTGGGGGCGGATTTGTGCAAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: AYNPKVEVFSNS*GFVGADLCKAD
Trigger: GTCGGCCTTGCACAAATCCGCCCCCACGAATCCCAAAGAATTGGAGAAAACTTCCACTTTGGGATTATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502295.1