RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CXXC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154832

Ensembl transcript IDs: ENST00000285106.11, ENST00000412036.6, ENST00000586144.1, ENST00000586365.5, ENST00000586502.1, ENST00000586568.1, ENST00000586837.1, ENST00000587170.1, ENST00000587342.1, ENST00000587396.1, ENST00000589548.6, ENST00000589940.5, ENST00000590234.5, ENST00000590901.5, ENST00000591190.5, ENST00000591474.5, ENST00000592078.1, ENST00000673786.1

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATaGGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCT +
Preference number: 1 (lower is better)
Translates to: GGQPVDGHRENRRNR*VEERTHGHRAAPPS
Trigger: AGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR CCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGAC +
Preference number: 1 (lower is better)
Translates to: GTVPLIKADGRSTGG*AQGEPEKQMSGGTD
Trigger: GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR CCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: DGDSPSDKGRWAVNR*MGTGRTGETDEWRN
Trigger: GTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR CCA 90 bp GGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACA +
Preference number: 1 (lower is better)
Translates to: GTEHVDGDSPSDKGR*AVNRWMGTGRTGET
Trigger: TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp TCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: SGPGGSAVGTGAQVGSEGGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...CCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
3UTR-3UTR CCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 2 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGTGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR TCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGAGCCCCACCAGGCACTaGACATGTCGACGGGGACAG +
Preference number: 2 (lower is better)
Translates to: QALNMSTGTVPLIKADGRSPTRH*TCRRGQ
Trigger: CTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCT...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR TCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 2 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR TCA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 2 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPINRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp CCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGGAGGCAAGGATGAGTaGACTCCGCAGCCCCACCAG +
Preference number: 2 (lower is better)
Translates to: PPGTEHVDGDSPSDKGRWGGKDE*TPQPHQ
Trigger: CTGGTGGGGCTGCGGAGTCCACTCATCCTTGCCTCC...CCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
3UTR-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: STGTVPLIKADGRSTGGWVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
3UTR-3UTR TCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 2 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 2 (lower is better)
Translates to: STGTVPLIKADGRSTGGWGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR TCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 2 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR-3UTR CCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 2 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGSDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR TCA 72 bp CCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATaGGTGGAGGAACGGACACACGGGCACCGGGCGGCT +
Preference number: 3 (lower is better)
Translates to: PVDGHRENRRNR*VEERTHGHRAA
Trigger: AGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR CCA 72 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATGGGCACAGGGAGAACC +
Preference number: 3 (lower is better)
Translates to: HVDGDSPSDKGR*AVNRWMGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
3UTR CCA 72 bp CCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAGAAACAGATGAGTGGA +
Preference number: 3 (lower is better)
Translates to: PLIKADGRSTGG*AQGEPEKQMSG
Trigger: TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGACCGGGCCCCAGGCACTaGGGCAGTGACGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGPGPRH*GSDAGS
Trigger: GGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGG...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTCTGTTGGGTGGGCAGTaGCCGGCGGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGLLGGQ*PAGPWQ
Trigger: CTGCCAAGGCCCCGCCGGCCACTGCCCACCCAACAG...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp GGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGGGCTGTGGCTGCTGTTaGGTGGGCAGTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GQEAQRSALERRSVVRGSGCGCC*VGSGRR
Trigger: CCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCC...CGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp CGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTTACTTGGAGCTGGGCTaGGCGGGGCGCACACAGCCG +
Preference number: 4 (lower is better)
Translates to: RAAPPSGMQGVRGPGQEAYLELG*AGRTQP
Trigger: CGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTA...AGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGATACTTGGAGCTGGGCTaGGCGGGGCGCACACAGCCG +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGYLELG*AGRTQP
Trigger: CGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTA...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGACGGCGTTCCATTTCCTaGAGGCGAGTGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PGQEAQRSALERRSVVRGRRSIS*RRVRAL
Trigger: GAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCG...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGACGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGRSRHF*RILLGP
Trigger: GGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCG...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGCTCTGCTGCCACTGCTaGATGCGCTGGGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: GVRGPGQEAQRSALERRSLCCHC*MRWGRI
Trigger: GATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAG...CGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGAGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGQEAQRSALERRSVVRGGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGTGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SGPGGSAVGTGAQVGSEGWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...CCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGACGAGTGCGGGCACTCTaGTGCTCTCGGCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGRVRAL*CSRRMR
Trigger: ACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCG...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCGTCCCAGGCGGTTaGAAAGGCGCCCACAACTAC +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGGVPGG*KGAHNY
Trigger: GTAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCC...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGATTGCGCAGGCCCCATaGGTCGTCTCCGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: RGPGQEAQRSALERRSVVIAQAP*VVSAAN
Trigger: GTTTGCAGCGGAGACGACGCATGGGGCCTGCGCAAT...CACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589548.6
CDS-3UTR CCA 90 bp GGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGAGCAATACTTGGAGCTaGGCTGGGCGGGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: GQEAQRSALERRSVVRGSSNTWS*AGRGAH
Trigger: GTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCT...CGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp TCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGCATCTGAGCAATACTTaGAGCTGGGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGPGGSAVGTGAQVGSEGHLSNT*SWAGRG
Trigger: GCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATG...CCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp CGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTTGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: RAAPPSGMQGVRGPGQEACCPAH*HPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCA...AGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTCATCCCGGGGCTCACTaGTGTCCCGCTCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGHPGAH*CPAHCH
Trigger: ATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATG...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGAATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PGQEAQRSALERRSVVRGMLHFH*PLPQRG
Trigger: CCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTGTTGGGTGGGCAGTaGCCGGCGGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLLLGGQ*PAGPWQ
Trigger: CTGCCAAGGCCCCGCCGGCCACTGCCCACCCAACAG...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGCCGGGCCCCAGGCACTaGGGCAGTGACGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMPGPRH*GSDAGS
Trigger: GGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGG...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCGGGCCCCAGGCACTaGGGCAGTGACGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGPGPRH*GSDAGS
Trigger: GGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGG...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCCCGGGCCCCAGGCACTaGGGCAGTGACGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTPGPRH*GSDAGS
Trigger: GGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGG...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGCTCAGTGCGCCGACATaGCTCACACTCACCACACAT +
Preference number: 4 (lower is better)
Translates to: GVRGPGQEAQRSALERRSLSAPT*LTLTTH
Trigger: ATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAG...CGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGMLHFH*PLPQRG
Trigger: CCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCTGCCGGATCTTGTTaGGGCCCCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGQEAQRSALERRSVVRGSAGSC*GPRTSS
Trigger: TGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGA...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGGGCTGTGGCTGCTGTTaGGTGGGCAGTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWGCGCC*VGSGRR
Trigger: CCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCC...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGCTGTGGCTGCTGTTaGGTGGGCAGTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTGCGCC*VGSGRR
Trigger: CCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCC...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCTGTGGCTGCTGTTaGGTGGGCAGTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMGCGCC*VGSGRR
Trigger: CCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGACCGGGCCCCAGGCACTaGGGCAGTGACGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGPGPRH*GSDAGS
Trigger: GGACCCTGCGTCACTGCCCCAGTGCCTGGGGCCCGG...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCGCGCAAGGCAACACGTaGGTTGATGGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: PIWNAGCKGSGPGGSAVGAQGNT*VDGVPT
Trigger: TGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC...GCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR TCA 90 bp AGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGCCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: RGPGQEAQRSALERRSVVPAQKS*YRSGSR
Trigger: TCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGG...CACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGCGACCCGCGAACCTaGACAGACCACTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGSDPRT*TDHSAA
Trigger: CGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGCT...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCAGGGACAGGCCTCTTaGGCCCTCCACCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGQGQAS*ALHPHP
Trigger: GGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTG...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGRSRHF*RILLGP
Trigger: GGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCG...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCGAGTGCGGGCACTCTaGTGCTCTCGGCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSRVRAL*CSRRMR
Trigger: ACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCG...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGTTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAPPSGMQGVRGPGQEAQFPEGE*GHSAAL
Trigger: GAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAA...CTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp AATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGAGCAGTAATGGCGATTaGACTGGCGCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NAGCKGSGPGGSAVGTGASSNGD*TGAWAG
Trigger: GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCT...CGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGTTTGTCATGGCTGTaGGCACATTGCGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGGLSWL*AHCAPA
Trigger: AGCAGGAGCGCAATGTGCGCACAGCCATGACAAACC...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGGTAGTGAGGGGATCGTaGTGGATCGTCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NAGCKGSGPGGSAVGTGAVVRGS*WIVWCS
Trigger: GCTGCACCAGACGATCCAGCACGATCCCCTCACTAC...CGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp AGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGGGCAGATGCAGTAGATaGGCGCATTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: RGPGQEAQRSALERRSVVGRCSR*AHSPHS
Trigger: AGAATGGGGAGAATGCGCCCATCTACTGCATCTGCC...CACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTACCACTCCCGGATaGCCTTGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGSTTPG*PWPSSQ
Trigger: CTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGDAGWV*PPRAAE
Trigger: CTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATC...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGGCTGGTGATGCTGGCTaGGTGTGGCCACCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLAGDAG*VWPPRA
Trigger: AGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGC...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATGCTGGTGATGCTGGCTaGGTGTGGCCACCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHAGDAG*VWPPRA
Trigger: AGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGC...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGCTGTTGGGTGGGCAGTaGCCGGCGGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRLLGGQ*PAGPWQ
Trigger: CTGCCAAGGCCCCGCCGGCCACTGCCCACCCAACAG...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGCTGTTGGGTGGGCAGTaGCCGGCGGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWALLGGQ*PAGPWQ
Trigger: CTGCCAAGGCCCCGCCGGCCACTGCCCACCCAACAG...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGACTGTTGGGTGGGCAGTaGCCGGCGGGGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGLLGGQ*PAGPWQ
Trigger: CTGCCAAGGCCCCGCCGGCCACTGCCCACCCAACAG...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGTACTTGGAGCTGGGCTaGGCGGGGCGCACACAGCCG +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQYLELG*AGRTQP
Trigger: CGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTA...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGTACTTGGAGCTGGGCTaGGCGGGGCGCACACAGCCG +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWYLELG*AGRTQP
Trigger: CGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTA...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGAGCAATACTTGGAGCTaGGCTGGGCGGGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRSNTWS*AGRGAH
Trigger: GTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCT...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCCGTCAGCTGGCACTTTaGGGTCCCGTGAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPIRQLAL*GPVSAR
Trigger: CCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACG...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGCGTCAGCTGGCACTTTaGGGTCCCGTGAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLRQLAL*GPVSAR
Trigger: CCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACG...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 4 (lower is better)
Translates to: RAAPPSGMQGVRGPGQEAGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...AGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGCTCCTTCAATGCGTGTaGGGTACATGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGPGQEAQRSALERRSVVLLQCV*GTWTQR
Trigger: CCTTTGGGTCCATGTACCCCACACGCATTGAAGGAG...CACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR TCA 90 bp CCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PIWNAGCKGSGPGGSAVGWPSSQ*SGCSPH
Trigger: ATGGGGACTGCATCCGGATCACTGAGAAGATGGCCA...GCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR TCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCGCCATCCCGCTCCCGTaGCTTCTTGTGCCGATAGCG +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGAIPLP*LLVPIA
Trigger: CGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGC...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGCCATCCCGCTCCCGTaGCTTCTTGTGCCGATAGCG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLAIPLP*LLVPIA
Trigger: CGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTCCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGPAQKS*YRSGSR
Trigger: TCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGG...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR TCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAAGCGACCCGCGAACCTaGACAGACCACTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGSDPRT*TDHSAA
Trigger: CGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGCT...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAAGCGACCCGCGAACCTaGACAGACCACTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGSDPRT*TDHSAA
Trigger: CGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGCT...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp CCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCCCGGTTTGCGGCAGATaGAGTAGATGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: PIWNAGCKGSGPGGSAVGPVCGR*SRWAHS
Trigger: AGAATGCGCCCATCTACTGCATCTGCCGCAAACCGG...GCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGTGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRCCPAH*HPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCA...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGCAGGGACAGGCCTCTTaGGCCCTCCACCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQQGQAS*ALHPHP
Trigger: GGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTG...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMDPARR*RSGSGT
Trigger: TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGDPARR*RSGSGT
Trigger: TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTC...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGRSRHF*RILLGP
Trigger: GGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGCGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRRSRHF*RILLGP
Trigger: GGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCG...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWARSRHF*RILLGP
Trigger: GGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCG...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGSRRFT*FTFTAL
Trigger: GAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGA...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGTGCTGGCGTGCTCTTCAGCAATaGAAGGGCTCTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: EAQRSALERRSVVRGSCWRALQQ*KGSAAT
Trigger: AGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACG...CCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGTGCGGGCACTCTGCTaGTCTCGGCGAATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGVRALC*SRRMRS
Trigger: CGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCAC...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATATGCGTCGTCTCCGCTaGAAACCAGTAGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHMRRLR*KPVGGR
Trigger: CCGGCCACCTACTGGTTTGCAGCGGAGACGACGCAT...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSCGEDL*GEAEPR
Trigger: TCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCA...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGDAGWV*PPRAAE
Trigger: CTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGAGGCTGTGGCTGCTGTTaGGTGGGCAGTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGGCGCC*VGSGRR
Trigger: CCGCCGGCCACTGCCCACCCAACAGCAGCCACAGCC...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGCGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLRGVQE*GLFCVA
Trigger: AGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCG...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGGTGACGCAGGGTCCTTaGCATCAGCCCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRVTQGP*HQPSLG
Trigger: ACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCAC...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGATACTTGGAGCTGGGCTaGGCGGGGCGCACACAGCCG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRYLELG*AGRTQP
Trigger: CGGCTGTGTGCGCCCCGCCCAGCCCAGCTCCAAGTA...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCAGCAATACTTGGAGCTaGGCTGGGCGGGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVSNTWS*AGRGAH
Trigger: GTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCT...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCCATCTGAGCAATACTTaGAGCTGGGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPIHLSNT*SWAGRG
Trigger: GCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATG...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTCTGCTGCCACTGCTaGATGCGCTGGGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLLCCHC*MRWGRI
Trigger: GATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAG...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCCTCTGCTGCCACTGCTaGATGCGCTGGGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGLCCHC*MRWGRI
Trigger: GATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAG...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGGCGCAAGGCAACACGTaGGTTGATGGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLAQGNT*VDGVPT
Trigger: TGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATGCGCAAGGCAACACGTaGGTTGATGGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHAQGNT*VDGVPT
Trigger: TGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGCCATCCCGCTCCCGTaGCTTCTTGTGCCGATAGCG +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGAIPLP*LLVPIA
Trigger: CGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGC...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSTTHAG*PFDLLL
Trigger: CAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGT...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGCGGCGTTCCATTTCCTaGAGGCGAGTGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWRRSIS*RRVRAL
Trigger: GAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCG...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACGGCGTTCCATTTCCTaGAGGCGAGTGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWARRSIS*RRVRAL
Trigger: GAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCG...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGAGCCCCACCAGGCACTaGACATGTCGACGGGGACAG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMSPTRH*TCRRGQ
Trigger: CTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCT...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCATCCCGGGGCTCACTaGTGTCCCGCTCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGHPGAH*CPAHCH
Trigger: ATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATG...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCATCCCGGGGCTCACTaGTGTCCCGCTCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLHPGAH*CPAHCH
Trigger: ATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATG...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGCAGGGACAGGCCTCTTaGGCCCTCCACCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRQGQAS*ALHPHP
Trigger: GGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTG...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACA +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETDPARR*RSGSGT
Trigger: TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTC...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRDPARR*RSGSGT
Trigger: TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTC...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKADPARR*RSGSGT
Trigger: TGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTC...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGGACCACAGTCCTCAGTaGGCCGACATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRDHSPQ*ADMPHT
Trigger: AGTGTGAGGCATGTCGGCGCACTGAGGACTGTGGTC...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGTCATCAAAGGCCCCTaGACAGAAGTCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGVIKGP*TEVLIQ
Trigger: CTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGAC...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCATGCAAGGGCTCTGCTaGCACTGCTGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLMQGLC*HCWMRW
Trigger: CCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGCAT...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCATGCAAGGGCTCTGCTaGCACTGCTGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVMQGLC*HCWMRW
Trigger: CCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGCAT...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGGTGCGGGCACTCTGCTaGTCTCGGCGAATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRVRALC*SRRMRS
Trigger: CGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCAC...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACGAGTGCGGGCACTCTaGTGCTCTCGGCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRRVRAL*CSRRMR
Trigger: ACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGCGAGTGCGGGCACTCTaGTGCTCTCGGCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWRVRAL*CSRRMR
Trigger: ACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCG...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGTTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLFPEGE*GHSAAL
Trigger: GAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAA...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGTTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLFPEGE*GHSAAL
Trigger: GAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAA...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCACTGTCACCCTCGTTaGTCTCCTCATCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLHCHPR*SPHPRA
Trigger: TGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCACTGTCACCCTCGTTaGTCTCCTCATCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHHCHPR*SPHPRA
Trigger: TGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTG...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGCGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLRTLRS*SNSSSS
Trigger: GCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCG...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCTGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVCGEDL*GEAEPR
Trigger: TCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCA...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKDAGWV*PPRAAE
Trigger: CTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATC...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRADAGWV*PPRAAE
Trigger: CTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATC...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGDAGWV*PPRAAE
Trigger: CTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATC...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGGCTGGTGATGCTGGCTaGGTGTGGCCACCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEAGDAG*VWPPRA
Trigger: AGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGC...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGGCTGGTGATGCTGGCTaGGTGTGGCCACCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRAGDAG*VWPPRA
Trigger: AGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGC...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGAGGCATCAGCCCTCTCTaGGTGTTTCCATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: PGQEAQRSALERRSVVRGGISPL*VFPFIL
Trigger: AAGGATAAATGGAAACACCCAGAGAGGGCTGATGCC...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGTGACGCAGGGTCCTTaGCATCAGCCCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGVTQGP*HQPSLG
Trigger: ACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCAC...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGAGCAATACTTGGAGCTaGGCTGGGCGGGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWSNTWS*AGRGAH
Trigger: GTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCT...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAGCAATACTTGGAGCTaGGCTGGGCGGGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWSNTWS*AGRGAH
Trigger: GTGTGCGCCCCGCCCAGCCCAGCTCCAAGTATTGCT...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACTCTGCTGCCACTGCTaGATGCGCTGGGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRLCCHC*MRWGRI
Trigger: GATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGCGCAAGGCAACACGTaGGTTGATGGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLAQGNT*VDGVPT
Trigger: TGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATTGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHCVWGT*TQRTSG
Trigger: GCCAGACGTCCTTTGGGTCCATGTACCCCACACGCA...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACGTCAGCTGGCACTTTaGGGTCCCGTGAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWARQLAL*GPVSAR
Trigger: CCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACG...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCCGTCAGCTGGCACTTTaGGGTCCCGTGAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTRQLAL*GPVSAR
Trigger: CCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACG...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGATTGCACTGGCGCTTaGGCAGGCGGCAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLDCTGA*AGGRSH
Trigger: GTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGGGCGGCTCCCCCATCTaGAATGCAGGGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEGGSPI*NAGCKG
Trigger: CCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCC...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGCGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGATGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGAGGCAAGGATGAGTaGACTCCGCAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMGGKDE*TPQPHQ
Trigger: CTGGTGGGGCTGCGGAGTCCACTCATCCTTGCCTCC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGAGGCAAGGATGAGTaGACTCCGCAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTGGKDE*TPQPHQ
Trigger: CTGGTGGGGCTGCGGAGTCCACTCATCCTTGCCTCC...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLWPSSQ*SGCSPH
Trigger: ATGGGGACTGCATCCGGATCACTGAGAAGATGGCCA...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAGCCATCCCGCTCCCGTaGCTTCTTGTGCCGATAGCG +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGAIPLP*LLVPIA
Trigger: CGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGC...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACGGCGTTCCATTTCCTaGAGGCGAGTGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRRRSIS*RRVRAL
Trigger: GAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGACGGCGTTCCATTTCCTaGAGGCGAGTGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGRRSIS*RRVRAL
Trigger: GAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCG...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCAGGCAACACGTGGGTTaGTGGGGTGCCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGRQHVG*WGAHRK
Trigger: TTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCT...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAAGCCCCACCAGGCACTaGACATGTCGACGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKSPTRH*TCRRGQ
Trigger: CTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACAGCCCCACCAGGCACTaGACATGTCGACGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDSPTRH*TCRRGQ
Trigger: CTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCT...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAAGCCCCACCAGGCACTaGACATGTCGACGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGSPTRH*TCRRGQ
Trigger: CTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCT...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACCCCATTCTCGGACTTaGTGTCCTCCCCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRPHSRT*CPPRHL
Trigger: CAGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCGGTTTGCGGCAGATaGAGTAGATGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSPVCGR*SRWAHS
Trigger: AGAATGCGCCCATCTACTGCATCTGCCGCAAACCGG...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGCATCCCGGGGCTCACTaGTGTCCCGCTCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGHPGAH*CPAHCH
Trigger: ATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATG...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCAGGGACAGGCCTCTTaGGCCCTCCACCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTQGQAS*ALHPHP
Trigger: GGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACAGGGACAGGCCTCTTaGGCCCTCCACCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGQGQAS*ALHPHP
Trigger: GGGATGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTG...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCTCAGTGCGCCGACATaGCTCACACTCACCACACAT +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLLSAPT*LTLTTH
Trigger: ATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGGTAGATGCGGTTGGCTaGCAGCTTCATGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRVDAVG*QLHATV
Trigger: GACTGTGGCATGAAGCTGGCAGCCAACCGCATCTAC...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCGTGCTCTTCAGCAATaGAAGGGCTCTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRRALQQ*KGSAAT
Trigger: AGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACG...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLAALGE*VRAASC
Trigger: GCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAGTGCGGGCACTCTGCTaGTCTCGGCGAATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRVRALC*SRRMRS
Trigger: CGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCAC...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGTGCGGGCACTCTGCTaGTCTCGGCGAATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKVRALC*SRRMRS
Trigger: CGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCAC...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCACTGTCACCCTCGTTaGTCTCCTCATCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVHCHPR*SPHPRA
Trigger: TGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTG...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGGGTTTGTCATGGCTGTaGGCACATTGCGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRGLSWL*AHCAPA
Trigger: AGCAGGAGCGCAATGTGCGCACAGCCATGACAAACC...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAGGCGTCCCAGGCGGTTaGAAAGGCGCCCACAACTAC +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRGVPGG*KGAHNY
Trigger: GTAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCC...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCAGTACCACTCCCGGATaGCCTTGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSSTTPG*PWPSSQ
Trigger: CTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAGCTGGTGATGCTGGCTaGGTGTGGCCACCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRAGDAG*VWPPRA
Trigger: AGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGC...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRRGVQE*GLFCVA
Trigger: AGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGCGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWRGVQE*GLFCVA
Trigger: AGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCG...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGTGACGCAGGGTCCTTaGCATCAGCCCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTVTQGP*HQPSLG
Trigger: ACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCAC...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGTGACGCAGGGTCCTTaGCATCAGCCCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGVTQGP*HQPSLG
Trigger: ACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCAC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGGTGACGCAGGGTCCTTaGCATCAGCCCTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWVTQGP*HQPSLG
Trigger: ACCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCAC...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGTCTCGTAGATGCGGTTaGCTGCCAGCTTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLSRRCG*LPASCH
Trigger: GTGGCATGAAGCTGGCAGCCAACCGCATCTACGAGA...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACTCTGCTGCCACTGCTaGATGCGCTGGGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRLCCHC*MRWGRI
Trigger: GATCCTCCCCCAGCGCATCCAGCAGTGGCAGCAGAG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGCGCAAGGCAACACGTaGGTTGATGGGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGAQGNT*VDGVPT
Trigger: TGTGGGCACCCCATCAACCCACGTGTTGCCTTGCGC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGACGTCAGCTGGCACTTTaGGGTCCCGTGAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGRQLAL*GPVSAR
Trigger: CCGAGCACTCACGGGACCCCAAAGTGCCAGCTGACG...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGATTGCACTGGCGCTTaGGCAGGCGGCAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMDCTGA*AGGRSH
Trigger: GTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCGCGCGGTTTGTCATaGCTGTGCGCACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGPRGLS*LCAHCA
Trigger: AGCGCAATGTGCGCACAGCCATGACAAACCGCGCGG...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACCGCGCGGTTTGTCATaGCTGTGCGCACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRPRGLS*LCAHCA
Trigger: AGCGCAATGTGCGCACAGCCATGACAAACCGCGCGG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACGGTCAACCGGTGGATaGGCACAGGGAGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRRSTGG*AQGEPE
Trigger: CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACTGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGTGGGCGGTCAACCGGTaGATGGGCACAGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAWAVNR*MGTGRT
Trigger: GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCA...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGGAGGCAAGGATGAGTaGACTCCGCAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETGGKDE*TPQPHQ
Trigger: CTGGTGGGGCTGCGGAGTCCACTCATCCTTGCCTCC...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGTTHAG*PFDLLL
Trigger: CAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGT...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCAACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWATTHAG*PFDLLL
Trigger: CAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGT...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCCTCAGGAGGCTCCTTaGCTGTTGATGACGCCACTG +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGPQEAP*LLMTPL
Trigger: CAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAGGCAACACGTGGGTTaGTGGGGTGCCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWRQHVG*WGAHRK
Trigger: TTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCT...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCAGGCAACACGTGGGTTaGTGGGGTGCCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTRQHVG*WGAHRK
Trigger: TTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCT...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCGGTTTGCGGCAGATaGAGTAGATGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVPVCGR*SRWAHS
Trigger: AGAATGCGCCCATCTACTGCATCTGCCGCAAACCGG...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGTGGGGTCTTTCTCTCTaGACTCCCGACAGTACCACT +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLWGLSL*TPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCA...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGCCPAH*HPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCA...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCATGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRACCPAH*HPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCA...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGATGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACT +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGCCPAH*HPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCA...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGGACCACAGTCCTCAGTaGGCCGACATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRDHSPQ*ADMPHT
Trigger: AGTGTGAGGCATGTCGGCGCACTGAGGACTGTGGTC...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWMLHFH*PLPQRG
Trigger: CCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQMLHFH*PLPQRG
Trigger: CCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHSRRFT*FTFTAL
Trigger: GAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGA...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGC +
Preference number: 4 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLLCFCF*RCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAA...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGATTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGC +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGFHLSL*FCFCRC
Trigger: GCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAA...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCGTAGATGCGGTTGGCTaGCAGCTTCATGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGVDAVG*QLHATV
Trigger: GACTGTGGCATGAAGCTGGCAGCCAACCGCATCTAC...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGTAGATGCGGTTGGCTaGCAGCTTCATGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGVDAVG*QLHATV
Trigger: GACTGTGGCATGAAGCTGGCAGCCAACCGCATCTAC...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAATGCAAGGGCTCTGCTaGCACTGCTGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKMQGLC*HCWMRW
Trigger: CCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGCAT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAATGCAAGGGCTCTGCTaGCACTGCTGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAMQGLC*HCWMRW
Trigger: CCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGCAT...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCGTGCTCTTCAGCAATaGAAGGGCTCTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGRALQQ*KGSAAT
Trigger: AGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACG...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPISSFLP*SSAMQG
Trigger: CCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCT...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRSSFLP*SSAMQG
Trigger: CCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCT...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWAALGE*VRAASC
Trigger: GCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGC...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTGCGGGCACTCTGCTaGTCTCGGCGAATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTVRALC*SRRMRS
Trigger: CGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCAC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCATCCTCGCGCACAGCCTaGTGCTTGGCACGTAGAATG +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWASSRTA*CLARRM
Trigger: CATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGA...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATCCTCGCGCACAGCCTaGTGCTTGGCACGTAGAATG +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRSSRTA*CLARRM
Trigger: CATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGA...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCTCCTCGCGCACAGCCTaGTGCTTGGCACGTAGAATG +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTSSRTA*CLARRM
Trigger: CATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGA...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGTCCTCGCGCACAGCCTaGTGCTTGGCACGTAGAATG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMSSRTA*CLARRM
Trigger: CATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGA...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCACTGTCACCCTCGTTaGTCTCCTCATCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGHCHPR*SPHPRA
Trigger: TGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGETQKI*RSVSSL
Trigger: CAGTGATGACACAGACCTGCAGATCTTCTGTGTTTC...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGETQKI*RSVSSL
Trigger: CAGTGATGACACAGACCTGCAGATCTTCTGTGTTTC...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCGTGGGTTGATGGGGTaGCCACAGGAAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVRGLMG*PQETQK
Trigger: CTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACG...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGTGTGGCCCCTTCAATaGGTGTGGGGTACATGGACC +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWVWPLQ*VWGTWT
Trigger: GGTCCATGTACCCCACACGCATTGAAGGGGCCACAC...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGGTGTGGCCCCTTCAATaGGTGTGGGGTACATGGACC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGVWPLQ*VWGTWT
Trigger: GGTCCATGTACCCCACACGCATTGAAGGGGCCACAC...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGTGTGGCCCCTTCAATaGGTGTGGGGTACATGGACC +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGVWPLQ*VWGTWT
Trigger: GGTCCATGTACCCCACACGCATTGAAGGGGCCACAC...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGCAGTAATGGCGATTaGACTGGCGCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGSSNGD*TGAWAG
Trigger: GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCT...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGCGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWRTLRS*SNSSSS
Trigger: GCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCG...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGRTLRS*SNSSSS
Trigger: GCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCGGTTTGTCATGGCTGTaGGCACATTGCGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVGLSWL*AHCAPA
Trigger: AGCAGGAGCGCAATGTGCGCACAGCCATGACAAACC...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGTAGTGAGGGGATCGTaGTGGATCGTCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGVVRGS*WIVWCS
Trigger: GCTGCACCAGACGATCCAGCACGATCCCCTCACTAC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGAGTAGTGAGGGGATCGTaGTGGATCGTCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRVVRGS*WIVWCS
Trigger: GCTGCACCAGACGATCCAGCACGATCCCCTCACTAC...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAATGCGTCGTCTCCGCTaGAAACCAGTAGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETMRRLR*KPVGGR
Trigger: CCGGCCACCTACTGGTTTGCAGCGGAGACGACGCAT...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAATTGCGCAGGCCCCATaGGTCGTCTCCGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGIAQAP*VVSAAN
Trigger: GTTTGCAGCGGAGACGACGCATGGGGCCTGCGCAAT...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGGCAGCGTACTCCTATTaGGCAGGCCCCATGCGTCGT +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRAAYSY*AGPMRR
Trigger: ACGACGCATGGGGCCTGCGCAATAGGAGTACGCTGC...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCGGATGCAGTCCCCATaGAACCACTCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSRMQSP*NHSLQL
Trigger: CAACTGCAATGAGTGGTTCCATGGGGACTGCATCCG...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRCGEDL*GEAEPR
Trigger: TCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCA...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGATGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRCGEDL*GEAEPR
Trigger: TCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCA...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAACGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKRGVQE*GLFCVA
Trigger: AGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCG...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGACATCTGAGCAATACTTaGAGCTGGGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGHLSNT*SWAGRG
Trigger: GCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATG...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCTCTCGTAGATGCGGTTaGCTGCCAGCTTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGSRRCG*LPASCH
Trigger: GTGGCATGAAGCTGGCAGCCAACCGCATCTACGAGA...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCTGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTCVWGT*TQRTSG
Trigger: GCCAGACGTCCTTTGGGTCCATGTACCCCACACGCA...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCCCCCTTCAATGCGTGTaGGGTACATGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DGDSPSDKGRWAVNRWMGPLQCV*GTWTQR
Trigger: CCTTTGGGTCCATGTACCCCACACGCATTGAAGGGG...GCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATTGCACTGGCGCTTaGGCAGGCGGCAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETDCTGA*AGGRSH
Trigger: GTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATC...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGATTGCACTGGCGCTTaGGCAGGCGGCAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWADCTGA*AGGRSH
Trigger: GTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATC...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCACCGCGCGGTTTGTCATaGCTGTGCGCACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAPRGLS*LCAHCA
Trigger: AGCGCAATGTGCGCACAGCCATGACAAACCGCGCGG...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGAGGCAAGGATGAGTaGACTCCGCAGCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTGGKDE*TPQPHQ
Trigger: CTGGTGGGGCTGCGGAGTCCACTCATCCTTGCCTCC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTWPSSQ*SGCSPH
Trigger: ATGGGGACTGCATCCGGATCACTGAGAAGATGGCCA...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTWPSSQ*SGCSPH
Trigger: ATGGGGACTGCATCCGGATCACTGAGAAGATGGCCA...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGCCATCCCGCTCCCGTaGCTTCTTGTGCCGATAGCG +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNAIPLP*LLVPIA
Trigger: CGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGTTHAG*PFDLLL
Trigger: CAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGT...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRTTHAG*PFDLLL
Trigger: CAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGT...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCACCTCAGGAGGCTCCTTaGCTGTTGATGACGCCACTG +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAPQEAP*LLMTPL
Trigger: CAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGG...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACCTCAGGAGGCTCCTTaGCTGTTGATGACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRPQEAP*LLMTPL
Trigger: CAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGACCTCAGGAGGCTCCTTaGCTGTTGATGACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGPQEAP*LLMTPL
Trigger: CAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGG...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGCTTGGCACGTAGAATaGTGGCCTCAAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLAWHVE*WPQAHG
Trigger: TCCATGAGCTTGAGGCCATCATTCTACGTGCCAAGC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAAGGCAACACGTGGGTTaGTGGGGTGCCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKRQHVG*WGAHRK
Trigger: TTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGCCGGTTTGCGGCAGATaGAGTAGATGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRPVCGR*SRWAHS
Trigger: AGAATGCGCCCATCTACTGCATCTGCCGCAAACCGG...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACTCAGTGCGCCGACATaGCTCACACTCACCACACAT +
Preference number: 4 (lower is better)
Translates to: TGTVPLIKADGRSTGGWALSAPT*LTLTTH
Trigger: ATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAG...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGGACCACAGTCCTCAGTaGGCCGACATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRDHSPQ*ADMPHT
Trigger: AGTGTGAGGCATGTCGGCGCACTGAGGACTGTGGTC...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAGACCACAGTCCTCAGTaGGCCGACATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGDHSPQ*ADMPHT
Trigger: AGTGTGAGGCATGTCGGCGCACTGAGGACTGTGGTC...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCCTCATCTTCACGGATaGGCCCTAACTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRPHLHG*ALTSVM
Trigger: CATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGG...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCCTCATCTTCACGGATaGGCCCTAACTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLPHLHG*ALTSVM
Trigger: CATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCGTCATCAAAGGCCCCTaGACAGAAGTCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSVIKGP*TEVLIQ
Trigger: CTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGAC...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRAMLHFH*PLPQRG
Trigger: CCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGC +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGLCFCF*RCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAA...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGATGCAAGGGCTCTGCTaGCACTGCTGGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PPGTEHVDGDSPSDKGRWMQGLC*HCWMRW
Trigger: CCAGCGCATCCAGCAGTGGCAGCAGAGCCCTTGCAT...CCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCGTGCTCTTCAGCAATaGAAGGGCTCTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPERALQQ*KGSAAT
Trigger: AGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGCGTGCTCTTCAGCAATaGAAGGGCTCTGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWRALQQ*KGSAAT
Trigger: AGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACG...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAAALGE*VRAASC
Trigger: GCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGC...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETAALGE*VRAASC
Trigger: GCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGC...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAAALGE*VRAASC
Trigger: GCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGC...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGAGTGCGGGCACTCTaGTGCTCTCGGCGAATGCGT +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNRVRAL*CSRRMR
Trigger: ACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCG...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGATTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGFPEGE*GHSAAL
Trigger: GAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAA...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGATTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRFPEGE*GHSAAL
Trigger: GAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAA...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCCTCGCGCACAGCCTaGTGCTTGGCACGTAGAATG +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRSSRTA*CLARRM
Trigger: CATTCTACGTGCCAAGCAGCAGGCTGTGCGCGAGGA...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCACACTGTCACCCTCGTTaGTCTCCTCATCCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAHCHPR*SPHPRA
Trigger: TGCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTG...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCGTGGGTTGATGGGGTaGCCACAGGAAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPERGLMG*PQETQK
Trigger: CTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAAGCAGTAATGGCGATTaGACTGGCGCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRSSNGD*TGAWAG
Trigger: GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCT...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGAGCAGTAATGGCGATTaGACTGGCGCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRSSNGD*TGAWAG
Trigger: GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCT...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAAGCAGTAATGGCGATTaGACTGGCGCTTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKSSNGD*TGAWAG
Trigger: GCCTGCCCAAGCGCCAGTGCAATCGCCATTACTGCT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGACGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGRTLRS*SNSSSS
Trigger: GCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCG...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAACGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKRTLRS*SNSSSS
Trigger: GCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCG...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGCAGCGTACTCCTATTaGGCAGGCCCCATGCGTCGT +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTAAYSY*AGPMRR
Trigger: ACGACGCATGGGGCCTGCGCAATAGGAGTACGCTGC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCGTTTTGCTCCTTCAATaGGTGTGGGGTACATGGACC +
Preference number: 4 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSVLLLQ*VWGTWT
Trigger: GGTCCATGTACCCCACACGCATTGAAGGAGCAAAAC...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCAGATGCAGTAGATaGGCGCATTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGGRCSR*AHSPHS
Trigger: AGAATGGGGAGAATGCGCCCATCTACTGCATCTGCC...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCGGATGCAGTCCCCATaGAACCACTCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLRMQSP*NHSLQL
Trigger: CAACTGCAATGAGTGGTTCCATGGGGACTGCATCCG...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGTACCACTCCCGGATaGCCTTGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGSTTPG*PWPSSQ
Trigger: CTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCAGTACCACTCCCGGATaGCCTTGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTSTTPG*PWPSSQ
Trigger: CTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGAGTACCACTCCCGGATaGCCTTGGCCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMSTTPG*PWPSSQ
Trigger: CTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCTCTGCCGGATCTTGTTaGGGCCCCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTSAGSC*GPRTSS
Trigger: TGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGA...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTRGVQE*GLFCVA
Trigger: AGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCATCTGAGCAATACTTaGAGCTGGGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTHLSNT*SWAGRG
Trigger: GCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACATCTGAGCAATACTTaGAGCTGGGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGHLSNT*SWAGRG
Trigger: GCCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATG...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGTCTCGTAGATGCGGTTaGCTGCCAGCTTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRSRRCG*LPASCH
Trigger: GTGGCATGAAGCTGGCAGCCAACCGCATCTACGAGA...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRCVWGT*TQRTSG
Trigger: GCCAGACGTCCTTTGGGTCCATGTACCCCACACGCA...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGATGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGCVWGT*TQRTSG
Trigger: GCCAGACGTCCTTTGGGTCCATGTACCCCACACGCA...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCCCCTTCAATGCGTGTaGGGTACATGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEPLQCV*GTWTQR
Trigger: CCTTTGGGTCCATGTACCCCACACGCATTGAAGGGG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGCCCCTTCAATGCGTGTaGGGTACATGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWPLQCV*GTWTQR
Trigger: CCTTTGGGTCCATGTACCCCACACGCATTGAAGGGG...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCCACAGAAGAGTCGTGTaGCCCCTTCAATGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTHRRVV*PLQCVW
Trigger: CCACACGCATTGAAGGGGCCACACGACTCTTCTGTG...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGCACAGAAGAGTCGTGTaGCCCCTTCAATGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGHRRVV*PLQCVW
Trigger: CCACACGCATTGAAGGGGCCACACGACTCTTCTGTG...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCCGCGCGGTTTGTCATaGCTGTGCGCACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTPRGLS*LCAHCA
Trigger: AGCGCAATGTGCGCACAGCCATGACAAACCGCGCGG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGAGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGTGAGGGGATCGTGCTaGATCGTCTGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGVRGSC*IVWCSI
Trigger: GATGCTGCACCAGACGATCCAGCACGATCCCCTCAC...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGAGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAWPSSQ*SGCSPH
Trigger: ATGGGGACTGCATCCGGATCACTGAGAAGATGGCCA...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACCTCAGGAGGCTCCTTaGCTGTTGATGACGCCACTG +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGPQEAP*LLMTPL
Trigger: CAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGG...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRPAQKS*YRSGSR
Trigger: TCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCTTGGCACGTAGAATaGTGGCCTCAAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWAWHVE*WPQAHG
Trigger: TCCATGAGCTTGAGGCCATCATTCTACGTGCCAAGC...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGAGGCAACACGTGGGTTaGTGGGGTGCCCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTRQHVG*WGAHRK
Trigger: TTTCCTGTGGGCACCCCATCAACCCACGTGTTGCCT...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGGCAGAAGTCACCCGTaGGCTCAAAGACATCACGTA +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWGRSHP*AQRHHV
Trigger: TACGTGATGTCTTTGAGCTCACGGGTGACTTCTGCC...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPENRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCCCCATTCTCGGACTTaGTGTCCTCCCCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNPHSRT*CPPRHL
Trigger: CAGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGG...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCATGGAACCACTCATTaGAGTTGTCACACCCGATCA +
Preference number: 4 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLHGTTH*SCHTRS
Trigger: TGATCGGGTGTGACAACTGCAATGAGTGGTTCCATG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCCATGGAACCACTCATTaGAGTTGTCACACCCGATCA +
Preference number: 4 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPIHGTTH*SCHTRS
Trigger: TGATCGGGTGTGACAACTGCAATGAGTGGTTCCATG...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGTGGGGTCTTTCTCTCTaGACTCCCGACAGTACCACT +
Preference number: 4 (lower is better)
Translates to: STGTVPLIKADGRSTGGWWGLSL*TPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCA...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGTGGGGTCTTTCTCTCTaGACTCCCGACAGTACCACT +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEWGLSL*TPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCA...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGTGGGGTCTTTCTCTCTaGACTCCCGACAGTACCACT +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWWGLSL*TPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCA...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGGGGTCTTTCTCTCTaGACTCCCGACAGTACCACT +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRWGLSL*TPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCA...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGCTCAGTGCGCCGACATaGCTCACACTCACCACACAT +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWALSAPT*LTLTTH
Trigger: ATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAG...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGAGACCACAGTCCTCAGTaGGCCGACATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGDHSPQ*ADMPHT
Trigger: AGTGTGAGGCATGTCGGCGCACTGAGGACTGTGGTC...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGTCATCAAAGGCCCCTaGACAGAAGTCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGVIKGP*TEVLIQ
Trigger: CTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGAC...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGLCFCF*RCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAA...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGTAGATGCGGTTGGCTaGCAGCTTCATGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETVDAVG*QLHATV
Trigger: GACTGTGGCATGAAGCTGGCAGCCAACCGCATCTAC...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMVRAAS*RALQQC
Trigger: GCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAAC...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWVRAAS*RALQQC
Trigger: GCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAAC...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGVRAAS*RALQQC
Trigger: GCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAAC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGVRAAS*RALQQC
Trigger: GCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAAC...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAACGTGGGTTGATGGGGTaGCCACAGGAAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKRGLMG*PQETQK
Trigger: CTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACG...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACACGTGGGTTGATGGGGTaGCCACAGGAAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETRGLMG*PQETQK
Trigger: CTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACG...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGGTTTGTCATGGCTGTaGGCACATTGCGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRGLSWL*AHCAPA
Trigger: AGCAGGAGCGCAATGTGCGCACAGCCATGACAAACC...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGTAGTGAGGGGATCGTaGTGGATCGTCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGTEHVDGDSPSDKGRWVVRGS*WIVWCS
Trigger: GCTGCACCAGACGATCCAGCACGATCCCCTCACTAC...CCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCAGGCGCCGCCATCTTaGTTATCGTATCCGTATGGT +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEQAPPS*LSYPYG
Trigger: ACCATACGGATACGATAAGCAAGATGGCGGCGCCTG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGCAGATGCAGTAGATaGGCGCATTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTGRCSR*AHSPHS
Trigger: AGAATGGGGAGAATGCGCCCATCTACTGCATCTGCC...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCCGGATGCAGTCCCCATaGAACCACTCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTRMQSP*NHSLQL
Trigger: CAACTGCAATGAGTGGTTCCATGGGGACTGCATCCG...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGACGGATGCAGTCCCCATaGAACCACTCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGRMQSP*NHSLQL
Trigger: CAACTGCAATGAGTGGTTCCATGGGGACTGCATCCG...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACTGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNCGEDL*GEAEPR
Trigger: TCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCA...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGATCTGCCGGATCTTGTTaGGGCCCCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRSAGSC*GPRTSS
Trigger: TGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGA...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCATCTGCCGGATCTTGTTaGGGCCCCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKASAGSC*GPRTSS
Trigger: TGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGA...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGATCTGCCGGATCTTGTTaGGGCCCCCGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGSAGSC*GPRTSS
Trigger: TGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGA...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCATCTCGTAGATGCGGTTaGCTGCCAGCTTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRASRRCG*LPASCH
Trigger: GTGGCATGAAGCTGGCAGCCAACCGCATCTACGAGA...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCATGGCCTCAAGCTCATaGAATCGGCGTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLMASSS*NRRSIS
Trigger: GGAAATGGAACGCCGATTCCATGAGCTTGAGGCCAT...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCATGGCCTCAAGCTCATaGAATCGGCGTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGMASSS*NRRSIS
Trigger: GGAAATGGAACGCCGATTCCATGAGCTTGAGGCCAT...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGACACAGAAGAGTCGTGTaGCCCCTTCAATGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGHRRVV*PLQCVW
Trigger: CCACACGCATTGAAGGGGCCACACGACTCTTCTGTG...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGATTGCACTGGCGCTTaGGCAGGCGGCAGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNDCTGA*AGGRSH
Trigger: GTGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGTCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWSDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGACCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGPAQKS*YRSGSR
Trigger: TCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGG...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCTTGGCACGTAGAATaGTGGCCTCAAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGAWHVE*WPQAHG
Trigger: TCCATGAGCTTGAGGCCATCATTCTACGTGCCAAGC...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGCTTGGCACGTAGAATaGTGGCCTCAAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGAWHVE*WPQAHG
Trigger: TCCATGAGCTTGAGGCCATCATTCTACGTGCCAAGC...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAGCTTGGCACGTAGAATaGTGGCCTCAAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGAWHVE*WPQAHG
Trigger: TCCATGAGCTTGAGGCCATCATTCTACGTGCCAAGC...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACGGCAGAAGTCACCCGTaGGCTCAAAGACATCACGTA +
Preference number: 4 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDGRSHP*AQRHHV
Trigger: TACGTGATGTCTTTGAGCTCACGGGTGACTTCTGCC...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAAACCGGAGAAACAGATaGGTGGAGGAACGGACACAC +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETNRRNR*VEERTH
Trigger: GTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTT...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACCGGTTTGCGGCAGATaGAGTAGATGGGCGCATTCT +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGPVCGR*SRWAHS
Trigger: AGAATGCGCCCATCTACTGCATCTGCCGCAAACCGG...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCATGGAACCACTCATTaGAGTTGTCACACCCGATCA +
Preference number: 4 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVHGTTH*SCHTRS
Trigger: TGATCGGGTGTGACAACTGCAATGAGTGGTTCCATG...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCCCTCATCTTCACGGATaGGCCCTAACTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTPHLHG*ALTSVM
Trigger: CATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGG...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCCCTCATCTTCACGGATaGGCCCTAACTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTPHLHG*ALTSVM
Trigger: CATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGG...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGGTCATCAAAGGCCCCTaGACAGAAGTCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEVIKGP*TEVLIQ
Trigger: CTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGAC...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGAGTCATCAAAGGCCCCTaGACAGAAGTCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRVIKGP*TEVLIQ
Trigger: CTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGAC...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDSRRFT*FTFTAL
Trigger: GAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGA...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACATCCCGACGCTTCACATaGTTCACTTTCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETSRRFT*FTFTAL
Trigger: GAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGA...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QALNMSTGTVPLIKADGRSRRFT*FTFTAL
Trigger: GAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGA...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCATTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGC +
Preference number: 4 (lower is better)
Translates to: QPHQALNMSTGTVPLIKALCFCF*RCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAA...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGATTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGC +
Preference number: 4 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGLCFCF*RCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAA...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGATTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGLSLCF*FCRCRL
Trigger: CAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAA...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCTTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTLSLCF*FCRCRL
Trigger: CAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAA...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGTTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: HVDGDSPSDKGRWAVNRWLSLCF*FCRCRL
Trigger: CAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAA...CCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATTTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHFHLSL*FCFCRC
Trigger: GCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAA...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRSSFLP*SSAMQG
Trigger: CCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCT...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETSSFLP*SSAMQG
Trigger: CCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCT...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRASSFLP*SSAMQG
Trigger: CCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCT...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGTAGTGAGGGGATCGTaGTGGATCGTCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNVVRGS*WIVWCS
Trigger: GCTGCACCAGACGATCCAGCACGATCCCCTCACTAC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACAGGCGCCGCCATCTTaGTTATCGTATCCGTATGGT +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRQAPPS*LSYPYG
Trigger: ACCATACGGATACGATAAGCAAGATGGCGGCGCCTG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGGTTTTGCTCCTTCAATaGGTGTGGGGTACATGGACC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGVLLLQ*VWGTWT
Trigger: GGTCCATGTACCCCACACGCATTGAAGGAGCAAAAC...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGCAGTAGATaGGCGCATTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKGRCSR*AHSPHS
Trigger: AGAATGGGGAGAATGCGCCCATCTACTGCATCTGCC...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGATGGCCTCAAGCTCATaGAATCGGCGTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEMASSS*NRRSIS
Trigger: GGAAATGGAACGCCGATTCCATGAGCTTGAGGCCAT...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGATCTGGCTCTCATACTTaGCGTAGCAGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGSGSHT*RSSAPC
Trigger: ACATGGAGCGCTGCTACGCCAAGTATGAGAGCCAGA...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTCTGGCTCTCATACTTaGCGTAGCAGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRSGSHT*RSSAPC
Trigger: ACATGGAGCGCTGCTACGCCAAGTATGAGAGCCAGA...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGAGAAACAGATGAGTaGAGGAACGGACACACGGGC +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTGETDE*RNGHTG
Trigger: GCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCATCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRASDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRSDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACACTCCTTCAATGCGTGTaGGGTACATGGACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETLLQCV*GTWTQR
Trigger: CCTTTGGGTCCATGTACCCCACACGCATTGAAGGAG...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR TCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGAAGTCACCCGTaGGCTCAAAGACATCACGTA +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTGRSHP*AQRHHV
Trigger: TACGTGATGTCTTTGAGCTCACGGGTGACTTCTGCC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCATGGAACCACTCATTaGAGTTGTCACACCCGATCA +
Preference number: 4 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGHGTTH*SCHTRS
Trigger: TGATCGGGTGTGACAACTGCAATGAGTGGTTCCATG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCATGGAACCACTCATTaGAGTTGTCACACCCGATCA +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEHGTTH*SCHTRS
Trigger: TGATCGGGTGTGACAACTGCAATGAGTGGTTCCATG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGACCTCATCTTCACGGATaGGCCCTAACTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRPHLHG*ALTSVM
Trigger: CATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGG...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAATTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKLSLCF*FCRCRL
Trigger: CAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAA...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGATTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRLSLCF*FCRCRL
Trigger: CAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAA...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGAGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGVRAAS*RALQQC
Trigger: GCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAAC...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLETQKI*RSVSSL
Trigger: CAGTGATGACACAGACCTGCAGATCTTCTGTGTTTC...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGTGGGTTGATGGGGTaGCCACAGGAAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNRGLMG*PQETQK
Trigger: CTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACG...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGCTTACAGTATGTTTTaGTCTGAGGATTATACACAT +
Preference number: 4 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGAYSMF*SEDYTH
Trigger: ATGTGTATAATCCTCAGAGCAAAACATACTGTAAGC...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR CCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGAGGCAGATGCAGTAGATaGGCGCATTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGGRCSR*AHSPHS
Trigger: AGAATGGGGAGAATGCGCCCATCTACTGCATCTGCC...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCGGATGCAGTCCCCATaGAACCACTCATTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTRMQSP*NHSLQL
Trigger: CAACTGCAATGAGTGGTTCCATGGGGACTGCATCCG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRSESLA*GLSLCT
Trigger: AGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCT...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGSESLA*GLSLCT
Trigger: AGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCT...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMSESLA*GLSLCT
Trigger: AGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCT...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGGGCATCAGCCCTCTCTaGGTGTTTCCATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEGISPL*VFPFIL
Trigger: AAGGATAAATGGAAACACCCAGAGAGGGCTGATGCC...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGCATCAGCCCTCTCTaGGTGTTTCCATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQGISPL*VFPFIL
Trigger: AAGGATAAATGGAAACACCCAGAGAGGGCTGATGCC...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGATGGCCTCAAGCTCATaGAATCGGCGTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAMASSS*NRRSIS
Trigger: GGAAATGGAACGCCGATTCCATGAGCTTGAGGCCAT...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGTCTGGCTCTCATACTTaGCGTAGCAGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTSGSHT*RSSAPC
Trigger: ACATGGAGCGCTGCTACGCCAAGTATGAGAGCCAGA...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGTCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PPGTEHVDGDSPSDKGRWSDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...CCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGATCTGATAAAGGCAGATaGGCGGTCAACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGSDKGR*AVNRWM
Trigger: CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNPAQKS*YRSGSR
Trigger: TCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGG...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGTTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGC +
Preference number: 4 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEFHLSL*FCFCRC
Trigger: GCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAA...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGTTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGC +
Preference number: 4 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGFHLSL*FCFCRC
Trigger: GCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAA...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQETQKI*RSVSSL
Trigger: CAGTGATGACACAGACCTGCAGATCTTCTGTGTTTC...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKSESLA*GLSLCT
Trigger: AGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWASESLA*GLSLCT
Trigger: AGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCT...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGGCATCAGCCCTCTCTaGGTGTTTCCATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRAGISPL*VFPFIL
Trigger: AAGGATAAATGGAAACACCCAGAGAGGGCTGATGCC...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CCA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGGCATCAGCCCTCTCTaGGTGTTTCCATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAGISPL*VFPFIL
Trigger: AAGGATAAATGGAAACACCCAGAGAGGGCTGATGCC...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCAGTATGTTTTGCTCTaGGGATTATACACATCACAG +
Preference number: 4 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLQYVLL*GLYTSQ
Trigger: CTGTGATGTGTATAATCCTCAGAGCAAAACATACTG...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGC +
Preference number: 4 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGFHLSL*FCFCRC
Trigger: GCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAA...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTG +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRAETQKI*RSVSSL
Trigger: CAGTGATGACACAGACCTGCAGATCTTCTGTGTTTC...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR TCA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAACAGTATGTTTTGCTCTaGGGATTATACACATCACAG +
Preference number: 4 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKQYVLL*GLYTSQ
Trigger: CTGTGATGTGTATAATCCTCAGAGCAAAACATACTG...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR TCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCAGTATGTTTTGCTCTaGGGATTATACACATCACAG +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNQYVLL*GLYTSQ
Trigger: CTGTGATGTGTATAATCCTCAGAGCAAAACATACTG...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGCTTACAGTATGTTTTaGTCTGAGGATTATACACAT +
Preference number: 4 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRAAYSMF*SEDYTH
Trigger: ATGTGTATAATCCTCAGAGCAAAACATACTGTAAGC...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS-3UTR GCA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGCTTACAGTATGTTTTaGTCTGAGGATTATACACAT +
Preference number: 4 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNAYSMF*SEDYTH
Trigger: ATGTGTATAATCCTCAGAGCAAAACATACTGTAAGC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000673786.1
CDS GCA 90 bp CTCCCGGCGCACTCCCTCACGACCCCCGCCAGCGACCCGCGAACCTaGACAGACCACTCGGCGGCGTCCCAGGCGGTTGCAAAGGCGCCC +
Preference number: 5 (lower is better)
Translates to: LPAHSLTTPASDPRT*TDHSAASQAVAKAP
Trigger: GGGCGCCTTTGCAACCGCCTGGGACGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGCTGGCGGGGGTCGTGAGGGAGTGCGCCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000285106.11
ENST00000586365.5
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CAA 90 bp TGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTGTGGCCGGCGGGGCCTaGGCAGGGACTCTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: CKGSGPGGSAVGTGAQVGVAGGA*AGTLRA
Trigger: CGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCAC...ACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp TCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGGGCTGCGGAGAGGATTaGTGGGGCGAAGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: SGPGGSAVGTGAQVGSEGGCGED*WGEAEP
Trigger: GGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCC...CCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp TCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGGGCAGCGTACTCCTATaGCGCAGGCCCCATGCGTCG +
Preference number: 5 (lower is better)
Translates to: SGPGGSAVGTGAQVGSEGGSVLL*RRPHAS
Trigger: CGACGCATGGGGCCTGCGCAATAGGAGTACGCTGCC...CCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589548.6
CDS GCA 90 bp CGAGCAAGCATGGCCCCAACCCCTGTCCCTGACCCTGCCCGGCGCTaGAGGTCTGGATCAGGGACAGGCCTCTTGCGCCCTCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: RASMAPTPVPDPARR*RSGSGTGLLRPPPS
Trigger: TGAGGGTGGAGGGCGCAAGAGGCCTGTCCCTGATCCAGACCTGCAGCGCCGGGCAGGGTCAGGGACAGGGGTTGGGGCCATGCTTGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGCTGCTGTCCCGCTCATaGCCATCCCGCTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: GQEAQRSALERRSVVRGSLLSRS*PSRSRD
Trigger: GTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAG...CGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp CCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCCTGCTGTCCCGCTCATaGCCATCCCGCTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: PIWNAGCKGSGPGGSAVGLLSRS*PSRSRD
Trigger: GTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAG...GCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGAATGCGGGCTGACCGTTaGATCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGQEAQRSALERRSVVRGMRADR*ICCCCC
Trigger: GCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCAT...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGGTGGCCGGCGGGGCCTaGGCAGGGACTCTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGVAGGA*AGTLRA
Trigger: CGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCAC...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGTGGCCGGCGGGGCCTaGGCAGGGACTCTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTVAGGA*AGTLRA
Trigger: CGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCAC...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGAAACAGCTCGTCCAGCTaGTACCACACACGCACGCGC +
Preference number: 5 (lower is better)
Translates to: PGQEAQRSALERRSVVRGNSSSS*YHTRTR
Trigger: GCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTT...TCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGTGGCCGGCGGGGCCTaGGCAGGGACTCTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAVAGGA*AGTLRA
Trigger: CGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCAC...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGTCGTCAGCTGGCACTTaGGGGTCCCGTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: AAPPSGMQGVRGPGQEAQSSAGT*GSRECS
Trigger: CGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGA...CTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAAACAGCTCGTCCAGCTaGTACCACACACGCACGCGC +
Preference number: 5 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGNSSSS*YHTRTR
Trigger: GCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTT...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGTGCTGGTCCCCATTCTCGGACTaGCTGTCCTCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: EAQRSALERRSVVRGSCWSPFSD*LSSPAS
Trigger: AGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGA...CCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTGGCCGGCGGGGCCTaGGCAGGGACTCTGAGGGCG +
Preference number: 5 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTVAGGA*AGTLRA
Trigger: CGCCCTCAGAGTCCCTGCCAAGGCCCCGCCGGCCAC...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGTGCTGGGCAATCCCGCGCGGTTaGTCATGGCTGTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: EAQRSALERRSVVRGSCWAIPRG*SWLCAH
Trigger: ATGTGCGCACAGCCATGACAAACCGCGCGGGATTGC...CCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCGGCGTCCCAGGCGGTaGCAAAGGCGCCCACAACTA +
Preference number: 5 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHRRPRR*QRRPQL
Trigger: TAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCCG...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS GCA 90 bp GGGGGCTGGACTCACCGAGGAAGGGAAGTACTTGTACGATTCCTGTaGCGGCAGGAGGAAGGCCCAGGTCAGCCCCAGGTGGATGGAGGG +
Preference number: 5 (lower is better)
Translates to: GGWTHRGREVLVRFL*RQEEGPGQPQVDGG
Trigger: CCCTCCATCCACCTGGGGCTGACCTGGGCCTTCCTCCTGCCGGCACAGGAATCGTACAAGTACTTCCCTTCCTCGGTGAGTCCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592078.1
CDS-3UTR CAA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCGGCTGCGGAGAGGATTaGTGGGGCGAAGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVGCGED*WGEAEP
Trigger: GGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCC...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACT +
Preference number: 5 (lower is better)
Translates to: AAPPSGMQGVRGPGQEAQASGGS*TVDDAT
Trigger: AGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC...CTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGAGTGACGCAGGGTCCTaGGCATCAGCCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLSDAGS*ASALSG
Trigger: CCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGAGTGACGCAGGGTCCTaGGCATCAGCCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRSDAGS*ASALSG
Trigger: CCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCACCGGGCGGCTCCCCCATCTGGAATGCAGGGTGTAAGGGGTCCGGGCCAGGACGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: APGGSPIWNAGCKGSGPGRSSSF*PCSSAM
Trigger: CATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG...TCCTGGCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGCGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GQEAQRSALERRSVVRGSRSSSF*PCSSAM
Trigger: CATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG...CGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTCGTCAGCTGGCACTTaGGGGTCCCGTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPISSAGT*GSRECS
Trigger: CGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGA...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCGATTGCACTGGCGCTaGGGCAGGCGGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSRLHWR*GRRQKS
Trigger: TGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCG...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS TCA 90 bp CGCCGTTCAGTCCACAGACTCCGGTTATGGCTCACCACAGACCCCTaGGTCGGCCGACAGACCCCACTGTTGCCAACCGACCGACCTCCA +
Preference number: 5 (lower is better)
Translates to: RRSVHRLRLWLTTDP*VGRQTPLLPTDRPP
Trigger: TGGAGGTCGGTCGGTTGGCAACAGTGGGGTCTGTCGGCCGACTCAGGGGTCTGTGGTGAGCCATAACCGGAGTCTGTGGACTGAACGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586837.1
CDS GCA 90 bp GGGAGGGAAGGGAGGTCCATCTGTCCTGGCTGGTTGCCCGTATCCTaGCCCAGCTCCACACACATCCCACTTCTGACCCCCGCCTTAACC +
Preference number: 5 (lower is better)
Translates to: GREGRSICPGWLPVS*PSSTHIPLLTPALT
Trigger: GGTTAAGGCGGGGGTCAGAAGTGGGATGTGTGTGGAGCTGGGGCAGGATACGGGCAACCAGCCAGGACAGATGGACCTCCCTTCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586568.1
CDS GCA 90 bp GCTGGGAAGGACAAAGTACAGGCCCTGCTCTGCTGCGCCCCTGCTTaGTCACCTCCTCATCCTCGCGCACAGCCTGCTGCTTGGCACGTA +
Preference number: 5 (lower is better)
Translates to: AGKDKVQALLCCAPA*SPPHPRAQPAAWHV
Trigger: TACGTGCCAAGCAGCAGGCTGTGCGCGAGGATGAGGAGGTGAGCAAGCAGGGGCGCAGCAGAGCAGGGCCTGTACTTTGTCCTTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS-3UTR CAA 90 bp GGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGTCCCCATTCTCGGACTaGCTGTCCTCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: GRTGETDEWRNGHTGTGRSPFSD*LSSPAS
Trigger: AGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGA...CCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTCCCCATTCTCGGACTaGCTGTCCTCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSSPFSD*LSSPAS
Trigger: AGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGA...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGTGCTGGCCGATCATGAAGCAGTaGATGTCCGGTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: EAQRSALERRSVVRGSCWPIMKQ*MSGLRQ
Trigger: CTGCCGCAAACCGGACATCAACTGCTTCATGATCGG...CCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGACTGCTGTCCCGCTCATaGCCATCCCGCTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRLLSRS*PSRSRD
Trigger: GTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAG...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGCTGCTGTCCCGCTCATaGCCATCCCGCTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQLLSRS*PSRSRD
Trigger: GTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAG...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGGCTGCGGAGAGGATTaGTGGGGCGAAGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGGCGED*WGEAEP
Trigger: GGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCATGCGGGCTGACCGTTaGATCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EKQMSGGTDTRAPGGSPIMRADR*ICCCCC
Trigger: GCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCAT...GATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCACTTCTGCCGGATCTaGTTGGGGCCCCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHHFCRI*LGPPNF
Trigger: GAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTG...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCGAGGAAGGGAAGTACTaGTACGATTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSEEGKY*YDSRAR
Trigger: GCGGGCCCGGGAATCGTACAAGTACTTCCCTTCCTC...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGCGGCGTCCCAGGCGGTaGCAAAGGCGCCCACAACTA +
Preference number: 5 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQRRPRR*QRRPQL
Trigger: TAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCCG...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CAA 90 bp GAGGCTCAGCGGTCGGCACTGGAGCGCAGGTCGGTAGTGAGGGGATCGTGCTGGTCAGGCGCCGCCATCTaGCTTATCGTATCCGTATGG +
Preference number: 5 (lower is better)
Translates to: EAQRSALERRSVVRGSCWSGAAI*LIVSVW
Trigger: CCATACGGATACGATAAGCAAGATGGCGGCGCCTGA...CCAGCACGATCCCCTCACTACCGACCTGCGCTCCAGTGCCGACCGCTGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589548.6
CDS-3UTR CAA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGAGGCAGCGTACTCCTATaGCGCAGGCCCCATGCGTCG +
Preference number: 5 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRGSVLL*RRPHAS
Trigger: CGACGCATGGGGCCTGCGCAATAGGAGTACGCTGCC...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS TCA 90 bp GTCCTCAGTGCGCCGACATGCCTCACACTCACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTGCTGCTGCTGGTGATGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VLSAPTCLTLTTHAG*PFDLLLLLLVMLAG
Trigger: CCCAGCCAGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000591190.5
ENST00000673786.1
CDS GCA 90 bp TGCGCCCTCCACCCTCATCCCGGGGCTCACTGCTGTCCCGCTCATTaGCATCCCGCTCCCGTGACTTCTTGTGCCGATAGCGAATCTCTA +
Preference number: 5 (lower is better)
Translates to: CALHPHPGAHCCPAH*HPAPVTSCADSESL
Trigger: TAGAGATTCGCTATCGGCACAAGAAGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATGAGGGTGGAGGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACCTGCTGTCCCGCTCATaGCCATCCCGCTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: TGGWAQGEPEKQMSGGTDLLSRS*PSRSRD
Trigger: GTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAG...GTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGGCTGCGGAGAGGATTaGTGGGGCGAAGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAGCGED*WGEAEP
Trigger: GGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCC...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCCACTTCTGCCGGATCTaGTTGGGGCCCCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGHFCRI*LGPPNF
Trigger: GAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTG...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACT +
Preference number: 5 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLASGGS*TVDDAT
Trigger: AGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAGTGACGCAGGGTCCTaGGCATCAGCCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRSDAGS*ASALSG
Trigger: CCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCTGAAGGCAACACGTGGGTaGATGGGGTGCCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: ETDEWRNGHTGTGRLPHLKATRG*MGCPQE
Trigger: TTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTT...CAGATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGTCGTCAGCTGGCACTTaGGGGTCCCGTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LIKADGRSTGGWAQGEPESSAGT*GSRECS
Trigger: CGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGA...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCCGATTGCACTGGCGCTaGGGCAGGCGGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGRLHWR*GRRQKS
Trigger: TGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCG...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACGATTGCACTGGCGCTaGGGCAGGCGGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: TGTVPLIKADGRSTGGWARLHWR*GRRQKS
Trigger: TGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCG...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCAACAGCTCGTCCAGCTaGTACCACACACGCACGCGC +
Preference number: 5 (lower is better)
Translates to: QGEPEKQMSGGTDTRAPGNSSSS*YHTRTR
Trigger: GCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTT...GCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS TCA 90 bp CCACACATGCGGGCTGACCGTTTGATCTGCTGCTGCTGCTGCTGGTaGTGCTGCAGGAGGGGGCCCAGAACAGAAATCATGGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PHMRADRLICCCCCW*CCRRGPRTEIMDPG
Trigger: GCCTGGGTCCATGATTTCTGTTCTGGGCCCCCTCCTGCAGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586365.5
ENST00000590901.5
CDS TCA 90 bp GTCCTCAGTGCGCCGACATGCCTCACACTCACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTGCTGCTGCTGGTGATGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VLSAPTCLTLTTHAG*PFDLLLLLLVMLQE
Trigger: CTCCTGCAGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586365.5
ENST00000590901.5
CDS GCA 90 bp AGCAATCCCGCGCGGTTTGTCATGGCTGTGCGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGCTTGTACCACACACGCACGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SNPARFVMAVRTLRS*SNSSSSLYHTRTRS
Trigger: GGAGCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCGCACAGCCATGACAAACCGCGCGGGATTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000587170.1
ENST00000587342.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 90 bp ACTACTTCCGCTTCTAGTCACGCCTCCCAGGCAGCGTACTCCTATTaGGCAGGCCCCATGCGTCGTCTCCGCTGCAAACCAGTAGGTGGC +
Preference number: 5 (lower is better)
Translates to: TTSASSHASQAAYSY*AGPMRRLRCKPVGG
Trigger: GCCACCTACTGGTTTGCAGCGGAGACGACGCATGGGGCCTGCGCAATAGGAGTACGCTGCCTGGGAGGCGTGACTAGAAGCGGAAGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS-3UTR CAA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATCCCCATTCTCGGACTaGCTGTCCTCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRSPFSD*LSSPAS
Trigger: AGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGA...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGCCGATCATGAAGCAGTaGATGTCCGGTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLPIMKQ*MSGLRQ
Trigger: CTGCCGCAAACCGGACATCAACTGCTTCATGATCGG...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCTTCTGCCGGATCTTGTaGGGGCCCCCGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RTGETDEWRNGHTGTGRLFCRIL*GPPNFF
Trigger: GAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAA...GAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCTTCTGCCGGATCTTGTaGGGGCCCCCGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVFCRIL*GPPNFF
Trigger: GAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAA...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGACACTTCTGCCGGATCTaGTTGGGGCCCCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: GRSTGGWAQGEPEKQMSGHFCRI*LGPPNF
Trigger: GAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTG...TCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGAGTGACGCAGGGTCCTaGGCATCAGCCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRSDAGS*ASALSG
Trigger: CCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGAGTGACGCAGGGTCCTaGGCATCAGCCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWASDAGS*ASALSG
Trigger: CCCAGAGAGGGCTGATGCCAAGGACCCTGCGTCACT...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCTCATCTGAGCAATACTaGGAGCTGGGCTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTSSEQY*ELGWAG
Trigger: CCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGA...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCCCCATCGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GETDEWRNGHTGTGRLPHRSSSF*PCSSAM
Trigger: CATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG...ATGGGGGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGTCACTGTCACCCTCGTaGCTCTCCTCATCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: STGTVPLIKADGRSTGGWSLSPS*LSSSSR
Trigger: GCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGA...CCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGTCACTGTCACCCTCGTaGCTCTCCTCATCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGSLSPS*LSSSSR
Trigger: GCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGA...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGTCACTGTCACCCTCGTaGCTCTCCTCATCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: TGRTGETDEWRNGHTGTGSLSPS*LSSSSR
Trigger: GCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGA...CCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGTCGTCAGCTGGCACTTaGGGGTCCCGTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRSSAGT*GSRECS
Trigger: CGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGA...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGCGATTGCACTGGCGCTaGGGCAGGCGGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QALNMSTGTVPLIKADGRRLHWR*GRRQKS
Trigger: TGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCG...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAACAGCTCGTCCAGCTaGTACCACACACGCACGCGC +
Preference number: 5 (lower is better)
Translates to: DSPSDKGRWAVNRWMGTGNSSSS*YHTRTR
Trigger: GCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTT...CCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCGCAATCCCGCGCGGTTaGTCATGGCTGTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: AAPPGTEHVDGDSPSDKGAIPRG*SWLCAH
Trigger: ATGTGCGCACAGCCATGACAAACCGCGCGGGATTGC...GCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGCAATCCCGCGCGGTTaGTCATGGCTGTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: GTVPLIKADGRSTGGWAQAIPRG*SWLCAH
Trigger: ATGTGCGCACAGCCATGACAAACCGCGCGGGATTGC...CTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGTCAGGCGCCGCCATCTaGCTTATCGTATCCGTATGG +
Preference number: 5 (lower is better)
Translates to: WTPQPHQALNMSTGTVPLSGAAI*LIVSVW
Trigger: CCATACGGATACGATAAGCAAGATGGCGGCGCCTGA...CAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS GCA 90 bp CCATTTCCTGAAGGCGAGTGCGGGCACTCTGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGCCGTGCTCTTCAGCAATGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: PFPEGECGHSAALGE*VRAASCRALQQCKG
Trigger: GCCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 90 bp AGGAACAATAAGGCTGGGAAGGACAAAGTACAGGCCCTGCTCTGCTaGGCCCCTGCTTGCTCACCTCCTCATCCTCGCGCACAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RNNKAGKDKVQALLC*APACSPPHPRAQPA
Trigger: AGCAGGCTGTGCGCGAGGATGAGGAGGTGAGCAAGCAGGGGCGCAGCAGAGCAGGGCCTGTACTTTGTCCTTCCCAGCCTTATTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS GCA 90 bp GGAAGGAACAATAAGGCTGGGAAGGACAAAGTACAGGCCCTGCTCTaGTGCGCCCCTGCTTGCTCACCTCCTCATCCTCGCGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: GRNNKAGKDKVQALL*CAPACSPPHPRAQP
Trigger: AGGCTGTGCGCGAGGATGAGGAGGTGAGCAAGCAGGGGCGCAGCAGAGCAGGGCCTGTACTTTGTCCTTCCCAGCCTTATTGTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS CCA 90 bp ATGCTTCACTTTCACTGCCCTCTTCCGCAGCGCGGGGTCCAGGAATaGGGACTCTTCTGTGTCGCTCATCCAGGGCAGGCCATGGTCATC +
Preference number: 5 (lower is better)
Translates to: MLHFHCPLPQRGVQE*GLFCVAHPGQAMVI
Trigger: GATGACCATGGCCTGCCCTGGATGAGCGACACAGAAGAGTCCCCATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS-3UTR CAA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAATGCGGGCTGACCGTTaGATCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGMRADR*ICCCCC
Trigger: GCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCAT...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAATGCGGGCTGACCGTTaGATCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKMRADR*ICCCCC
Trigger: GCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCAT...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATTCTGCCGGATCTTGTaGGGGCCCCCGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RQMGGQPVDGHRENRRNRFCRIL*GPPNFF
Trigger: GAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAA...TCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGTTCTGCCGGATCTTGTaGGGGCCCCCGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: AVNRWMGTGRTGETDEWRFCRIL*GPPNFF
Trigger: GAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAA...CCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGCACTTCTGCCGGATCTaGTTGGGGCCCCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAHFCRI*LGPPNF
Trigger: GAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTG...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGACACTTCTGCCGGATCTaGTTGGGGCCCCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGHFCRI*LGPPNF
Trigger: GAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTG...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGAGGAAGGGAAGTACTaGTACGATTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: QPHQALNMSTGTVPLIKAEEGKY*YDSRAR
Trigger: GCGGGCCCGGGAATCGTACAAGTACTTCCCTTCCTC...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589940.5
CDS-3UTR CAA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGAGGAAGGGAAGTACTaGTACGATTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTREEGKY*YDSRAR
Trigger: GCGGGCCCGGGAATCGTACAAGTACTTCCCTTCCTC...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589940.5
CDS-3UTR CAA 90 bp TCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGATCATCTGAGCAATACTaGGAGCTGGGCTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SDKGRWAVNRWMGTGRTGSSEQY*ELGWAG
Trigger: CCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGA...TCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCATCATCTGAGCAATACTaGGAGCTGGGCTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QPHQALNMSTGTVPLIKASSEQY*ELGWAG
Trigger: CCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGA...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATCATCTGAGCAATACTaGGAGCTGGGCTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGSSEQY*ELGWAG
Trigger: CCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGA...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGATCACTGTCACCCTCGTaGCTCTCCTCATCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: RSTGGWAQGEPEKQMSGGSLSPS*LSSSSR
Trigger: GCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGA...TCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAATCACTGTCACCCTCGTaGCTCTCCTCATCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKSLSPS*LSSSSR
Trigger: GCGCGAGGATGAGGAGAGCAACGAGGGTGACAGTGA...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCAAAGGCAACACGTGGGTaGATGGGGTGCCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: TGTVPLIKADGRSTGGWAKATRG*MGCPQE
Trigger: TTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTT...TGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCAAGGCAACACGTGGGTaGATGGGGTGCCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTKATRG*MGCPQE
Trigger: TTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTT...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGTCGTCAGCTGGCACTTaGGGGTCCCGTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTSSAGT*GSRECS
Trigger: CGAGCACTCACGGGACCCCAAAGTGCCAGCTGACGA...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGCGATTGCACTGGCGCTaGGGCAGGCGGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTRLHWR*GRRQKS
Trigger: TGACTTCTGCCGCCTGCCCAAGCGCCAGTGCAATCG...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAAACAGCTCGTCCAGCTaGTACCACACACGCACGCGC +
Preference number: 5 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRANSSSS*YHTRTR
Trigger: GCGCGTGCGTGTGTGGTACAAGCTGGACGAGCTGTT...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCAGCAATCCCGCGCGGTTaGTCATGGCTGTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: WAQGEPEKQMSGGTDTRAAIPRG*SWLCAH
Trigger: ATGTGCGCACAGCCATGACAAACCGCGCGGGATTGC...TGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AATGCAGGGTGTAAGGGGTCCGGGCCAGGAGGCTCAGCGGTCGGCACTGGAGCGCGCTTACAGTATGTTTaGCTCCTTCAATGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: NAGCKGSGPGGSAVGTGARLQYV*LLQCVW
Trigger: CCACACGCATTGAAGGAGCAAAACATACTGTAAGCG...CGCTCCAGTGCCGACCGCTGAGCCTCCTGGCCCGGACCCCTTACACCCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS TCA 90 bp GTCCTCAGTGCGCCGACATGCCTCACACTCACCACACATGCGGGCTaGCCGTTTGATCTGCTGCTGCTGCTGCTGGTGATGCATATCTCC +
Preference number: 5 (lower is better)
Translates to: VLSAPTCLTLTTHAG*PFDLLLLLLVMHIS
Trigger: GGAGATATGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCATGTGTGGTGAGTGTGAGGCATGTCGGCGCACTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591474.5
CDS GCA 90 bp TGGCCTCAAGCTCATGGAATCGGCGTTCCATTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTCGGCGAATGCGTTCGAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: WPQAHGIGVPFPEGE*GHSAALGECVRAAS
Trigger: AGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCGATTCCATGAGCTTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 90 bp GGAATGGAAGGAACAATAAGGCTGGGAAGGACAAAGTACAGGCCCTaGTCTGCTGCGCCCCTGCTTGCTCACCTCCTCATCCTCGCGCAC +
Preference number: 5 (lower is better)
Translates to: GMEGTIRLGRTKYRP*SAAPLLAHLLILAH
Trigger: GTGCGCGAGGATGAGGAGGTGAGCAAGCAGGGGCGCAGCAGAGCAGGGCCTGTACTTTGTCCTTCCCAGCCTTATTGTTCCTTCCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS-3UTR CAA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGTCCCCATTCTCGGACTaGCTGTCCTCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTSPFSD*LSSPAS
Trigger: AGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGA...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGCCGATCATGAAGCAGTaGATGTCCGGTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: LIKADGRSTGGWAQGEPEPIMKQ*MSGLRQ
Trigger: CTGCCGCAAACCGGACATCAACTGCTTCATGATCGG...CTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCATGGAACCACTCATaGCAGTTGTCACACCCGATC +
Preference number: 5 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVPWNHS*QLSHPI
Trigger: GATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGATGCGGGCTGACCGTTaGATCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPGTEHVDGDSPSDKGRWMRADR*ICCCCC
Trigger: GCAGCAGCAGCAGCAGATCAAACGGTCAGCCCGCAT...CCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAATTCTGCCGGATCTTGTaGGGGCCCCCGAACTTCTTC +
Preference number: 5 (lower is better)
Translates to: SAAPPGTEHVDGDSPSDKFCRIL*GPPNFF
Trigger: GAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAA...TTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACT +
Preference number: 5 (lower is better)
Translates to: GWAQGEPEKQMSGGTDTRASGGS*TVDDAT
Trigger: AGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC...CCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACT +
Preference number: 5 (lower is better)
Translates to: SPSDKGRWAVNRWMGTGRASGGS*TVDDAT
Trigger: AGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC...TCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACT +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAASGGS*TVDDAT
Trigger: AGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGC...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAAAGGCAACACGTGGGTaGATGGGGTGCCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: TVPLIKADGRSTGGWAQGKATRG*MGCPQE
Trigger: TTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTT...TCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGCCGATCATGAAGCAGTaGATGTCCGGTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWAPIMKQ*MSGLRQ
Trigger: CTGCCGCAAACCGGACATCAACTGCTTCATGATCGG...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACACCGATCATGAAGCAGTaGATGTCCGGTTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETPIMKQ*MSGLRQ
Trigger: CTGCCGCAAACCGGACATCAACTGCTTCATGATCGG...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGCCATGGAACCACTCATaGCAGTTGTCACACCCGATC +
Preference number: 5 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMPWNHS*QLSHPI
Trigger: GATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCCCATGGAACCACTCATaGCAGTTGTCACACCCGATC +
Preference number: 5 (lower is better)
Translates to: PSDKGRWAVNRWMGTGRTPWNHS*QLSHPI
Trigger: GATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG...GGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCCCATGGAACCACTCATaGCAGTTGTCACACCCGATC +
Preference number: 5 (lower is better)
Translates to: GTGRTGETDEWRNGHTGTPWNHS*QLSHPI
Trigger: GATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG...GGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACTCATCTGAGCAATACTaGGAGCTGGGCTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNSSEQY*ELGWAG
Trigger: CCCCGCCCAGCCCAGCTCCAAGTATTGCTCAGATGA...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AAAGGCAGATGGGCGGTCAACCGGTGGATGGGCACAGGGAGAACCGGAGAAACACGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: KGRWAVNRWMGTGRTGETRSSSF*PCSSAM
Trigger: CATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG...TGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTTGACCGCCCATCTGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp TGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGAAGGCAACACGTGGGTaGATGGGGTGCCCACAGGAA +
Preference number: 5 (lower is better)
Translates to: WMGTGRTGETDEWRNGHTKATRG*MGCPQE
Trigger: TTCCTGTGGGCACCCCATCAACCCACGTGTTGCCTT...CGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACGCAATCCCGCGCGGTTaGTCATGGCTGTGCGCACAT +
Preference number: 5 (lower is better)
Translates to: TEHVDGDSPSDKGRWAVNAIPRG*SWLCAH
Trigger: ATGTGCGCACAGCCATGACAAACCGCGCGGGATTGC...GTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS TCA 90 bp ACTCCCGACAGTACCACTCCCGGATGGCCTTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCATGGAACCACTCATTGCAGTTGTCAC +
Preference number: 5 (lower is better)
Translates to: TPDSTTPGWPWPSSQ*SGCSPHGTTHCSCH
Trigger: GTGACAACTGCAATGAGTGGTTCCATGGGGACTGCATCCGGATCACTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACTGTCGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000587396.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS TCA 90 bp ATCCAGGGCAGGCCATGGTCATCAAAGGCCCCTGCACAGAAGTCCTaGTACAGGTCAGGATCCAGAGGTAGGTCCTCATCTGAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: IQGRPWSSKAPAQKS*YRSGSRGRSSSESG
Trigger: GCCACTCTCAGATGAGGACCTACCTCTGGATCCTGACCTGTATCAGGACTTCTGTGCAGGGGCCTTTGATGACCATGGCCTGCCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 90 bp CTTCTCAGACTTCTTCTCCCGACGCTTCACATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGGGTCCAGGAATGGGGACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LLRLLLPTLHMLHFH*PLPQRGVQEWGLFC
Trigger: ACAGAAGAGTCCCCATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 90 bp CGCTCCTCCTTCTTCTTCTCAGACTTCTTCTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTCTTCCGCAGCGCGGGGTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSSFFFSDFFSRRFT*FTFTALFRSAGSRN
Trigger: ATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGAAGGAGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS CCA 90 bp CATCACAGAAGAGTCGTGTGGCCCCTTCAATGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGCTCTCATACTTGGCGTAGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: HHRRVVWPLQCVWGT*TQRTSGSHTWRSSA
Trigger: AGCGCTGCTACGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGGCCACACGACTCTTCTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000590901.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGCCATGGAACCACTCATaGCAGTTGTCACACCCGATC +
Preference number: 5 (lower is better)
Translates to: QALNMSTGTVPLIKADGRPWNHS*QLSHPI
Trigger: GATCGGGTGTGACAACTGCAATGAGTGGTTCCATGG...CCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GAACCGGAGAAACAGATGAGTGGAGGAACGGACACACGGGCACCGGGCGGCTCCTGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: EPEKQMSGGTDTRAPGGSCFHLS*CFCFCR
Trigger: TCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA...GGAGCCGCCCGGTGCCCGTGTGTCCGTTCCTCCACTCATCTGTTTCTCCGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp AACCGGTGGATGGGCACAGGGAGAACCGGAGAAACAGATGAGTGGAGGAACGGACGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: NRWMGTGRTGETDEWRNGRSSSF*PCSSAM
Trigger: CATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACG...TCCGTTCCTCCACTCATCTGTTTCTCCGGTTCTCCCTGTGCCCATCCACCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS GCA 90 bp GCAACACGTGGGTTGATGGGGTGCCCACAGGAAACACAGAAGATCTaGAGGTCTGTGTCATCACTGTCACCCTCGTTGCTCTCCTCATCC +
Preference number: 5 (lower is better)
Translates to: ATRGLMGCPQETQKI*RSVSSLSPSLLSSS
Trigger: GGATGAGGAGAGCAACGAGGGTGACAGTGATGACACAGACCTGCAGATCTTCTGTGTTTCCTGTGGGCACCCCATCAACCCACGTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586568.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 90 bp CTCTCCATCACCTTCTTCTCAGACTTCTTCTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTCTTCCGCAGCGCGGGGTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LSITFFSDFFSRRFT*FTFTALFRSAGSRN
Trigger: ATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGGTGATGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS CCA 90 bp AACCACTTTACACATCCATTCACTTTATGCAGCCACTCACCTGGCTaGGTGTGGCCACCAAGGGCTGCGGAGAGGATTTGTGGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: NHFTHPFTLCSHSPG*VWPPRAAERICGAK
Trigger: CTTCGCCCCACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAGCCAGGTGAGTGGCTGCATAAAGTGAATGGATGTGTAAAGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586365.5
ENST00000590901.5
CDS-3UTR CAA 90 bp GATGAGTGGACTCCGCAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCTGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: DEWTPQPHQALNMSTGTVCFHLS*CFCFCR
Trigger: TCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA...GACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTGCGGAGTCCACTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp GTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGTGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: VDGDSPSDKGRWAVNRWMCFHLS*CFCFCR
Trigger: TCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA...CATCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp CAGCCCCACCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCACGCTTACAGTATGTTTaGCTCCTTCAATGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: QPHQALNMSTGTVPLIKARLQYV*LLQCVW
Trigger: CCACACGCATTGAAGGAGCAAAACATACTGTAAGCG...TGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGGTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS GCA 90 bp TCAGCCCTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGCTCCTCCTTCCTCTCCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: SALSGCFHLSLCFCF*RCRLYRSSFLSITF
Trigger: GAAGGTGATGGAGAGGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS GCA 90 bp TTGGCATCAGCCCTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTGTATCGCTCCTCCTTCCTCTCCATC +
Preference number: 5 (lower is better)
Translates to: LASALSGCFHLSLCF*FCRCRLYRSSFLSI
Trigger: GATGGAGAGGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS CCA 90 bp AGCCGCTTACAGTATGTTTTGCTCCTTCAATGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGCTCTCATACTTGGCGTAGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: SRLQYVLLLQCVWGT*TQRTSGSHTWRSSA
Trigger: AGCGCTGCTACGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGAGCAAAACATACTGTAAGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS-3UTR CAA 90 bp CCAGGCACTGAACATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGTGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: PGTEHVDGDSPSDKGRWACFHLS*CFCFCR
Trigger: TCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA...CGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACATGTTCAGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS-3UTR CAA 90 bp ATGTCGACGGGGACAGTCCCTCTGATAAAGGCAGATGGGCGGTCAACCGGTGGATGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: MSTGTVPLIKADGRSTGGCFHLS*CFCFCR
Trigger: TCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA...TCCACCGGTTGACCGCCCATCTGCCTTTATCAGAGGGACTGTCCCCGTCGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000673786.1
CDS GCA 90 bp TCAGCCCTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGCTCCTCCTTCTTCTTCTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: SALSGCFHLSLCFCF*RCRLYRSSFFFSDF
Trigger: GAAGTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 90 bp TTGGCATCAGCCCTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTGTATCGCTCCTCCTTCTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LASALSGCFHLSLCF*FCRCRLYRSSFFFS
Trigger: TGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 90 bp CTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTGCCGATaGCGCTTGTATCGCTCCTCCTTCCTCTCCATCACCTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LSGCFHLSLCFCFCR*RLYRSSFLSITFFS
Trigger: TGAGAAGAAGGTGATGGAGAGGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS GCA 90 bp CTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTGCCGATaGCGCTTGTATCGCTCCTCCTTCTTCTTCTCAGACTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSGCFHLSLCFCFCR*RLYRSSFFFSDFFS
Trigger: GGAGAAGAAGTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 90 bp AAACACAGAAGATCTGCAGGTCTGTGTCATCACTGTCACCCTCGTTaGTCTGCATGGAATGGAAGGAACAATAAGGCTGGGAAGGACAAA +
Preference number: 5 (lower is better)
Translates to: KHRRSAGLCHHCHPR*SAWNGRNNKAGKDK
Trigger: TTTGTCCTTCCCAGCCTTATTGTTCCTTCCATTCCATGCAGAGCAACGAGGGTGACAGTGATGACACAGACCTGCAGATCTTCTGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS GCA 72 bp CACTCCCTCACGACCCCCGCCAGCGACCCGCGAACCTaGACAGACCACTCGGCGGCGTCCCAGGCGGTTGCA +
Preference number: 6 (lower is better)
Translates to: HSLTTPASDPRT*TDHSAASQAVA
Trigger: TGCAACCGCCTGGGACGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGCTGGCGGGGGTCGTGAGGGAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000285106.11
ENST00000586365.5
ENST00000587396.1
ENST00000589548.6
ENST00000591474.5
ENST00000673786.1
CDS CCA 72 bp TCTGAGGGCGTCACTGGTGAGAGCCGGGCCCGCAGCTaGCACTGGCGCAGCCGGCACTTCTGCCGGATCTTG +
Preference number: 6 (lower is better)
Translates to: SEGVTGESRARS*HWRSRHFCRIL
Trigger: CAAGATCCGGCAGAAGTGCCGGCTGCGCCAGTGCCAGCTGCGGGCCCGGCTCTCACCAGTGACGCCCTCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000589548.6
ENST00000591190.5
ENST00000673786.1
CDS GCA 72 bp GCCTCTTGCGCCCTCCACCCTCATCCCGGGGCTCACTaGTGTCCCGCTCATTGCCATCCCGCTCCCGTGACT +
Preference number: 6 (lower is better)
Translates to: ASCALHPHPGAH*CPAHCHPAPVT
Trigger: AGTCACGGGAGCGGGATGGCAATGAGCGGGACAGCAGTGAGCCCCGGGATGAGGGTGGAGGGCGCAAGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000673786.1
CDS GCA 72 bp CGGGCCCGCAGCTGGCACTGGCGCAGCCGGCACTTCTaGCGGATCTTGTTGGGGCCCCCGAACTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: RARSWHWRSRHF*RILLGPPNFFM
Trigger: CATGAAGAAGTTCGGGGGCCCCAACAAGATCCGGCAGAAGTGCCGGCTGCGCCAGTGCCAGCTGCGGGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000673786.1
CDS CAA 90 bp GCGACCCGCGAACCTGCACAGACCACTCGGCGGCGTCCCAGGCGGTaGCAAAGGCGCCCACAACTACTTCCGCTTCTAGTCACGCCTCCC +
Preference number: 6 (lower is better)
Translates to: ATREPAQTTRRRPRR*QRRPQLLPLLVTPP
Trigger: GGGAGGCGTGACTAGAAGCGGAAGTAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCCGCCGAGTGGTCTGTGCAGGTTCGCGGGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS CCA 72 bp CTGGGTGTGGCCACCAAGGGCTGCGGAGAGGATTTGTaGGGCGAAGCAGAGCCCCGAGCAAGCATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LGVATKGCGEDL*GEAEPRASMAP
Trigger: TGGGGCCATGCTTGCTCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000673786.1
CDS CAA 72 bp TGGCTGGGTGTGGCCACCAAGGGCTGCGGAGAGGATTaGTGGGGCGAAGCAGAGCCCCGAGCAAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: WLGVATKGCGED*WGEAEPRASMA
Trigger: GGCCATGCTTGCTCGGGGCTCTGCTTCGCCCCACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000673786.1
CDS TCA 72 bp CGGGCTGACCGTTTGATCTGCTGCTGCTGCTGCTGGTaGTGCTGGCTGGGTGTGGCCACCAAGGGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: RADRLICCCCCW*CWLGVATKGCG
Trigger: TCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000591190.5
ENST00000673786.1
CDS CCA 72 bp TCTGCTGCTGCTGCTGCTGGTGATGCTGGCTGGGTGTaGCCACCAAGGGCTGCGGAGAGGATTTGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: SAAAAAGDAGWV*PPRAAERICGA
Trigger: CGCCCCACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAGCCAGCATCACCAGCAGCAGCAGCAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586837.1
ENST00000589548.6
ENST00000589940.5
ENST00000591190.5
ENST00000673786.1
CDS TCA 72 bp CGGGCTGACCGTTTGATCTGCTGCTGCTGCTGCTGGTaGTGCATATCTCCGCTCCCGGCGCACTCCCTCACG +
Preference number: 6 (lower is better)
Translates to: RADRLICCCCCW*CISPLPAHSLT
Trigger: CGTGAGGGAGTGCGCCGGGAGCGGAGATATGCATCACCAGCAGCAGCAGCAGCAGATCAAACGGTCAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591474.5
CDS GCA 72 bp GACAAAGTACAGGCCCTGCTCTGCTGCGCCCCTGCTTaGTCACCTCCTCATCCTCGCGCACAGCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: DKVQALLCCAPA*SPPHPRAQPAA
Trigger: AGCAGCAGGCTGTGCGCGAGGATGAGGAGGTGAGCAAGCAGGGGCGCAGCAGAGCAGGGCCTGTACTTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS TCA 72 bp GTCCACAGACTCCGGTTATGGCTCACCACAGACCCCTaGGTCGGCCGACAGACCCCACTGTTGCCAACCGAC +
Preference number: 6 (lower is better)
Translates to: VHRLRLWLTTDP*VGRQTPLLPTD
Trigger: GTCGGTTGGCAACAGTGGGGTCTGTCGGCCGACTCAGGGGTCTGTGGTGAGCCATAACCGGAGTCTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586837.1
CDS GCA 72 bp GCTTCTAGTCACGCCTCCCAGGCAGCGTACTCCTATTaGGCAGGCCCCATGCGTCGTCTCCGCTGCAAACCA +
Preference number: 6 (lower is better)
Translates to: ASSHASQAAYSY*AGPMRRLRCKP
Trigger: TGGTTTGCAGCGGAGACGACGCATGGGGCCTGCGCAATAGGAGTACGCTGCCTGGGAGGCGTGACTAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS CAA 72 bp GAACCTGCACAGACCACTCGGCGGCGTCCCAGGCGGTaGCAAAGGCGCCCACAACTACTTCCGCTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: EPAQTTRRRPRR*QRRPQLLPLLV
Trigger: GACTAGAAGCGGAAGTAGTTGTGGGCGCCTTTGCAACCGCCTGGGACGCCGCCGAGTGGTCTGTGCAGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000673786.1
CDS GCA 72 bp TGCAGTAGATGGGCGCATTCTCCCCATTCTCGGACTTaGTGTCCTCCCCGGCATCTGGAGGCTCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: CSRWAHSPHSRT*CPPRHLEALGL
Trigger: CAGACCCAGAGCCTCCAGATGCCGGGGAGGACAGCAAGTCCGAGAATGGGGAGAATGCGCCCATCTACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000587396.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp GAAGGCGAGTGCGGGCACTCTGCTGCTCTCGGCGAATaGGTTCGAGCAGCTTCTTGCCGTGCTCTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: EGECGHSAALGE*VRAASCRALQQ
Trigger: TTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS CCA 72 bp AGTAGAGGGAGGGAAGGGAGGTCCATCTGTCCTGGCTaGTTGCCCGTATCCTGCCCCAGCTCCACACACATC +
Preference number: 6 (lower is better)
Translates to: SRGREGRSICPG*LPVSCPSSTHI
Trigger: GATGTGTGTGGAGCTGGGGCAGGATACGGGCAACCAGCCAGGACAGATGGACCTCCCTTCCCTCCCTCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586568.1
CDS TCA 72 bp CCACCCAGACAACAAATCTGTCCCCCACTGGCCCACTaGTGTTCCCACATGGTCCGCCCCCTCAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: PPRQQICPPLAH*CSHMVRPLSLT
Trigger: TGTCAGACTGAGGGGGCGGACCATGTGGGAACATCAGTGGGCCAGTGGGGGACAGATTTGTTGTCTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000586144.1
ENST00000586502.1
ENST00000586568.1
CDS GCA 72 bp CTTCTTCTCCCGACGCTTCACATGCTTCACTTTCACTaGCCTCTTCCGCAGCGCGGGGTCCAGGAATGGGGA +
Preference number: 6 (lower is better)
Translates to: LLLPTLHMLHFH*PLPQRGVQEWG
Trigger: TCCCCATTCCTGGACCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 72 bp TGCTCTCGGCGAATGCGTTCGAGCAGCTTCTTGCCGTaGTCTTCAGCAATGCAAGGGCTCTGCTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: CSRRMRSSSFLP*SSAMQGLCCHC
Trigger: GCAGTGGCAGCAGAGCCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp TCTGCTGCTCTCGGCGAATGCGTTCGAGCAGCTTCTTaGCGTGCTCTTCAGCAATGCAAGGGCTCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SAALGECVRAAS*RALQQCKGSAA
Trigger: GGCAGCAGAGCCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp GCTCATGGAATCGGCGTTCCATTTCCTGAAGGCGAGTaGGGGCACTCTGCTGCTCTCGGCGAATGCGTTCGA +
Preference number: 6 (lower is better)
Translates to: AHGIGVPFPEGE*GHSAALGECVR
Trigger: TCGAACGCATTCGCCGAGAGCAGCAGAGTGCCCGCACTCGCCTTCAGGAAATGGAACGCCGATTCCATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586568.1
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp GCGCGGTTTGTCATGGCTGTGCGCACATTGCGCTCCTaGTCAAACAGCTCGTCCAGCTTGTACCACACACGC +
Preference number: 6 (lower is better)
Translates to: ARFVMAVRTLRS*SNSSSSLYHTR
Trigger: GCGTGTGTGGTACAAGCTGGACGAGCTGTTTGAGCAGGAGCGCAATGTGCGCACAGCCATGACAAACCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000587170.1
ENST00000587342.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp GCATCTGGAGGCTCTGGGTCTGAACCATCTCCCTCCTaGAGGACACCCCCATTACGGATCCTTAAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: ASGGSGSEPSPS*RTPPLRILKQP
Trigger: GGGCTGCTTAAGGATCCGTAATGGGGGTGTCCTGCAGGAGGGAGATGGTTCAGACCCAGAGCCTCCAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590901.5
CDS CCA 72 bp CCAAGACACCACCCAGACAACAAATCTGTCCCCCACTaGCCCACTGATGTTCCCACATGGTCCGCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: PRHHPDNKSVPH*PTDVPTWSAPS
Trigger: TGAGGGGGCGGACCATGTGGGAACATCAGTGGGCCAGTGGGGGACAGATTTGTTGTCTGGGTGGTGTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000586144.1
ENST00000586502.1
ENST00000586568.1
CDS CAA 72 bp CTCTGCTGCTCTCGGCGAATGCGTTCGAGCAGCTTCTaGCCGTGCTCTTCAGCAATGCAAGGGCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LCCSRRMRSSSF*PCSSAMQGLCC
Trigger: GCAGCAGAGCCCTTGCATTGCTGAAGAGCACGGCAAGAAGCTGCTCGAACGCATTCGCCGAGAGCAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp ACCTCTCACTGCGTGGCACCCTCACTTACCCTTCAATaGGTGTGGGGTACATGGACCCAAAGGACGTCTGGC +
Preference number: 6 (lower is better)
Translates to: TSHCVAPSLTLQ*VWGTWTQRTSG
Trigger: GCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGTAAGTGAGGGTGCCACGCAGTGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586568.1
CDS CAA 72 bp AGTGGCTCAGGTGTGGCTGTAGCCTCAGGAGGCTCCTaGACTGTTGATGACGCCACTGCCCCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: SGSGVAVASGGS*TVDDATAPSSS
Trigger: TGAAGATGAGGGGGCAGTGGCGTCATCAACAGTCAAGGAGCCTCCTGAGGCTACAGCCACACCTGAGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS TCA 72 bp AGTACCACTCCCGGATGGCCTTGGCCATCTTCTCAGTaGTCCGGATGCAGTCCCCATGGAACCACTCATTGC +
Preference number: 6 (lower is better)
Translates to: STTPGWPWPSSQ*SGCSPHGTTHC
Trigger: GCAATGAGTGGTTCCATGGGGACTGCATCCGGATCACTGAGAAGATGGCCAAGGCCATCCGGGAGTGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000587396.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp CTGTTGATGACGCCACTGCCCCCTCATCTTCACGGATaGGCCCTAACTTCTGTGATGGCTGTGGCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LLMTPLPPHLHG*ALTSVMAVAAV
Trigger: AACAGCAGCCACAGCCATCACAGAAGTTAGGGCGCATCCGTGAAGATGAGGGGGCAGTGGCGTCATCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 72 bp ACCTTCTTCTCAGACTTCTTCTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTCTTCCGCAGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: TFFSDFFSRRFT*FTFTALFRSAG
Trigger: CCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS CCA 72 bp AGAGTCGTGTGGCCCCTTCAATGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGCTCTCATACTTGGCGT +
Preference number: 6 (lower is better)
Translates to: RVVWPLQCVWGT*TQRTSGSHTWR
Trigger: ACGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGGCCACACGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000590901.5
ENST00000673786.1
CDS CCA 72 bp CACTGCGTGGCACCCTCACTTACCCTTCAATGCGTGTaGGGTACATGGACCCAAAGGACGTCTGGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: HCVAPSLTLQCV*GTWTQRTSGSH
Trigger: ATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGGTAAGTGAGGGTGCCACGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586568.1
CDS GCA 72 bp TTCTTCTTCTCAGACTTCTTCTCCCGACGCTTCACATaGTTCACTTTCACTGCCCTCTTCCGCAGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: FFFSDFFSRRFT*FTFTALFRSAG
Trigger: CCCCGCGCTGCGGAAGAGGGCAGTGAAAGTGAAGCATGTGAAGCGTCGGGAGAAGAAGTCTGAGAAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS CCA 72 bp ACACATCCATTCACTTTATGCAGCCACTCACCTGGCTaGGTGTGGCCACCAAGGGCTGCGGAGAGGATTTGT +
Preference number: 6 (lower is better)
Translates to: THPFTLCSHSPG*VWPPRAAERIC
Trigger: ACAAATCCTCTCCGCAGCCCTTGGTGGCCACACCCAGCCAGGTGAGTGGCTGCATAAAGTGAATGGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586365.5
ENST00000590901.5
CDS GCA 72 bp GCCCTCTCTGGGTGTTTCCATTTATCCTTGTGCTTCTaGTTCTGCCGATGCCGCTTGTATCGCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ALSGCFHLSLCF*FCRCRLYRSSF
Trigger: GAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 72 bp GCATCAGCCCTCTCTGGGTGTTTCCATTTATCCTTGTaGTTCTGCTTCTGCCGATGCCGCTTGTATCGCTCC +
Preference number: 6 (lower is better)
Translates to: ASALSGCFHLSL*FCFCRCRLYRS
Trigger: GGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS CCA 72 bp CCCGTGACTTCTTGTGCCGATAGCGAATCTCTAGCTTaGGGTCTTTCTCTCTGCACTCCCGACAGTACCACT +
Preference number: 6 (lower is better)
Translates to: PVTSCADSESLA*GLSLCTPDSTT
Trigger: AGTGGTACTGTCGGGAGTGCAGAGAGAAAGACCCCAAGCTAGAGATTCGCTATCGGCACAAGAAGTCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000586365.5
ENST00000586837.1
ENST00000587396.1
ENST00000589548.6
ENST00000589940.5
ENST00000590901.5
ENST00000673786.1
CDS GCA 72 bp TCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGCTCCTCCTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SGCFHLSLCFCF*RCRLYRSSFLS
Trigger: GGAGAGGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS CAA 72 bp TTGGCATCAGCCCTCTCTGGGTGTTTCCATTTATCCTaGTGCTTCTGCTTCTGCCGATGCCGCTTGTATCGC +
Preference number: 6 (lower is better)
Translates to: LASALSGCFHLS*CFCFCRCRLYR
Trigger: GCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGAGAGGGCTGATGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000285106.11
ENST00000412036.6
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000591474.5
ENST00000592078.1
ENST00000673786.1
CDS CAA 90 bp GGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTGCCGATGCCGCTaGTATCGCTCCTCCTTCTTCTTCTCAGACTTCTTCTCCCGACGC +
Preference number: 6 (lower is better)
Translates to: GCFHLSLCFCFCRCR*YRSSFFFSDFFSRR
Trigger: GCGTCGGGAGAAGAAGTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS GCA 72 bp TGTTTCCATTTATCCTTGTGCTTCTGCTTCTGCCGATaGCGCTTGTATCGCTCCTCCTTCCTCTCCATCACC +
Preference number: 6 (lower is better)
Translates to: CFHLSLCFCFCR*RLYRSSFLSIT
Trigger: GGTGATGGAGAGGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412036.6
ENST00000591474.5
CDS GCA 72 bp AGATCTGCAGGTCTGTGTCATCACTGTCACCCTCGTTaGTCTGCATGGAATGGAAGGAACAATAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RSAGLCHHCHPR*SAWNGRNNKAG
Trigger: CCCAGCCTTATTGTTCCTTCCATTCCATGCAGAGCAACGAGGGTGACAGTGATGACACAGACCTGCAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS CCA 72 bp CAGTATGTTTTGCTCCTTCAATGCGTGTGGGGTACATaGACCCAAAGGACGTCTGGCTCTCATACTTGGCGT +
Preference number: 6 (lower is better)
Translates to: QYVLLLQCVWGT*TQRTSGSHTWR
Trigger: ACGCCAAGTATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGAGCAAAACATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS CCA 72 bp AGCCGCTTACAGTATGTTTTGCTCCTTCAATGCGTGTaGGGTACATGGACCCAAAGGACGTCTGGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: SRLQYVLLLQCV*GTWTQRTSGSH
Trigger: ATGAGAGCCAGACGTCCTTTGGGTCCATGTACCCCACACGCATTGAAGGAGCAAAACATACTGTAAGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589548.6
ENST00000589940.5
CDS GCA 72 bp TCTGGGTGTTTCCATTTATCCTTGTGCTTCTGCTTCTaGCGATGCCGCTTGTATCGCTCCTCCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGCFHLSLCFCF*RCRLYRSSFFF
Trigger: GAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS CCA 72 bp GGTCTGTGTCATCACTGTCACCCTCGTTGCTCTGCATaGAATGGAAGGAACAATAAGGCTGGGAAGGACAAA +
Preference number: 6 (lower is better)
Translates to: GLCHHCHPRCSA*NGRNNKAGKDK
Trigger: TTTGTCCTTCCCAGCCTTATTGTTCCTTCCATTCCATGCAGAGCAACGAGGGTGACAGTGATGACACAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590234.5
CDS GCA 72 bp TGTTTCCATTTATCCTTGTGCTTCTGCTTCTGCCGATaGCGCTTGTATCGCTCCTCCTTCTTCTTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: CFHLSLCFCFCR*RLYRSSFFFSD
Trigger: GTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1
CDS CAA 72 bp CATTTATCCTTGTGCTTCTGCTTCTGCCGATGCCGCTaGTATCGCTCCTCCTTCTTCTTCTCAGACTTCTTC +
Preference number: 6 (lower is better)
Translates to: HLSLCFCFCRCR*YRSSFFFSDFF
Trigger: GAAGAAGTCTGAGAAGAAGAAGGAGGAGCGATACAAGCGGCATCGGCAGAAGCAGAAGCACAAGGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000285106.11
ENST00000589548.6
ENST00000589940.5
ENST00000590234.5
ENST00000590901.5
ENST00000591190.5
ENST00000592078.1
ENST00000673786.1