Pregenerated sensors for CXCL17 (Homo sapiens)
Ensembl gene IDs: ENSG00000189377Ensembl transcript IDs: ENST00000341918.4, ENST00000601181.6
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCCTTaGAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: AFCGAFGVLFSSHCP*NDHRGTASLAAQTL Trigger: CAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGAAAACAAGACACCAAAGGCACCACAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR TCA 90 bp | GGGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTaGGAATGTTTAATTGGAAGAGTGGGCGCTCAGAGCTCCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: GRRRVSGRCAHCLLG*ECLIGRVGAQSSYK Trigger: TTTGTAGGAGCTCTGAGCGCCCACTCTTCCAATTAAACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR CCA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTaGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: GDRVRVLVGISMCRI*IQSAVNRVKWVIWL Trigger: CAACCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| 3UTR TCA 90 bp | AGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCTGACATTGTTTaGGAAATTGCTGGCAGGCTCTGGAATGCTTGTTTGGCTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RAPTKAEQSFLADIV*EIAGRLWNACLAFC Trigger: ACAGAAAGCCAAACAAGCATTCCAGAGCCTGCCAGCAATTTCTCAAACAATGTCAGCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTTCTTCACATTGCCCTTaGAATGATCACAGGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: GEEECLVGVLTVFLAENVSSHCP*NDHRGT Trigger: AGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGA...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR-3UTR CCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCTGAGAATGTTTAATTaGAAGAGTGGGCGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVLRMFN*KSGRSE Trigger: CTCTGAGCGCCCACTCTTCCAATTAAACATTCTCAG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGTGCTCACTGTCTTCTTaGCTGAGAATGTTTAATTGG | + |
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Preference number: 2 (lower is better) Translates to: MCRIWIQSAVNRVKWVIWCSLSS*LRMFNW Trigger: CCAATTAAACATTCTCAGCCAAGAAGACAGTGAGCA...CCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCTGACGGTGCCTTTGGTGTCTaGTTTTCTTCACATTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: EEWALRAPTKAEQSFLADGAFGV*FSSHCP Trigger: AGGGCAATGTGAAGAAAACAAGACACCAAAGGCACC...GTCAGCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR TCA 72 bp | GGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCCTTaGAATGATCACAGGGGCACTGCTTCTTTGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GAFGVLFSSHCP*NDHRGTASLAA Trigger: GGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGAAAACAAGACACCAAAGGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR CCA 72 bp | GTGTGCTCACTGTCTTCTTGGCTGAGAATGTTTAATTaGAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VCSLSSWLRMFN*KSGRSELLQRQ Trigger: CTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTCCAATTAAACATTCTCAGCCAAGAAGACAGTGAGCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR-3UTR CAA 90 bp | ATTGGAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCCTTTCTGTGGTGCCTTaGGTGTCTTGTTTTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: IGRVGAQSSYKGRAKLLSLSVVP*VSCFLH Trigger: GTGAAGAAAACAAGACACCAAAGGCACCACAGAAAG...GCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTACATTGTTTGAGAAATaGCTGGCAGGCTCTGGAATG | + |
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Preference number: 3 (lower is better) Translates to: GEEECLVGVLTVFLAENVTLFEK*LAGSGM Trigger: CATTCCAGAGCCTGCCAGCAATTTCTCAAACAATGT...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| 3UTR TCA 72 bp | TCCCACCTCGCTCTTACCTCAGAAAGATTTGTCGAATaGGTGAAAGATGAACAAGTAGGCCAATGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: SHLALTSERFVE*VKDEQVGQWRQ Trigger: CTGTCTCCATTGGCCTACTTGTTCATCTTTCACTCATTCGACAAATCTTTCTGAGGTAAGAGCGAGGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| 3UTR CCA 72 bp | GTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTaGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VRVLVGISMCRI*IQSAVNRVKWV Trigger: GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| 3UTR TCA 72 bp | ACAAAGGCAGAGCAAAGCTTCTTAGCTGACATTGTTTaGGAAATTGCTGGCAGGCTCTGGAATGCTTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: TKAEQSFLADIV*EIAGRLWNACL Trigger: CAAACAAGCATTCCAGAGCCTGCCAGCAATTTCTCAAACAATGTCAGCTAAGAAGCTTTGCTCTGCCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTGTCATGGTCCCTGTGGCCTCTaGCGACCCCTGGATTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ALEMITGALLLWQPRHCHGPCGL*RPLDSG Trigger: GCCTGAATCCAGGGGTCGCCAGAGGCCACAGGGACC...ATGACAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCGCCTCTGGCGACCCCTaGATTCAGGCTGCTAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: IGRVGAQSSYKGRAKLLSASGDP*IQAARD Trigger: GTCTCTAGCAGCCTGAATCCAGGGGTCGCCAGAGGC...GCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTTGGCCTCGGTCCCTGTaGCCTCTGGCGACCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GSGMLVWLSVVPLVSCFLWPRSL*PLATPG Trigger: TCCAGGGGTCGCCAGAGGCCACAGGGACCGAGGCCA...AAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCTGACTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: EEWALRAPTKAEQSFLADSWPPS*SHLLEA Trigger: GGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGA...GTCAGCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR TCA 90 bp | GAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCTTAGCTGACGCCCAGACACTGTCATaGATTTTCTTCTCGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEWALRAPTKAEQSFLADAQTLS*IFFSGL Trigger: GAGCCCCGAGAAGAAAATTCATGACAGTGTCTGGGC...GTCAGCTAAGAAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTGGATTCAGTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GDRVRVLVGISMCRIWIQSWPPS*SHLLEA Trigger: GGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGA...CTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCCATCTCCTAGAAGCCTaGCCTCGGTCCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MLVWLSVVPLVSCFLHIAHLLEA*PRSLWP Trigger: AGGCCACAGGGACCGAGGCCAGGCTTCTAGGAGATG...GGCAATGTGAAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR TCA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTGGATTCAGGCCCAGACACTGTCATaGATTTTCTTCTCGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDRVRVLVGISMCRIWIQAQTLS*IFFSGL Trigger: GAGCCCCGAGAAGAAAATTCATGACAGTGTCTGGGC...CTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCGGTCCCTGTGGCCTCTaGCGACCCCTGGATTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVGPCGL*RPLDSG Trigger: GCCTGAATCCAGGGGTCGCCAGAGGCCACAGGGACC...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGCATCTCCTAGAAGCCTaGCCTCGGTCCCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MCRIWIQSAVNRVKWVIWHLLEA*PRSLWP Trigger: AGGCCACAGGGACCGAGGCCAGGCTTCTAGGAGATG...CCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | TTTCTTCACATTGCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCTCTTCACATTGCCCTTaGAATGATCACAGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: FLHIALEMITGALLLWQPSSHCP*NDHRGT Trigger: AGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGA...GGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTTCAGGAACCAATCTTTaGACTCACATTCTTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GEEECLVGVLTVFLAENVSGTNL*THILGR Trigger: GCGGCCAAGAATGTGAGTGCAAAGATTGGTTCCTGA...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCGCCTCTGGCGACCCCTaGATTCAGGCTGCTAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVASGDP*IQAARD Trigger: GTCTCTAGCAGCCTGAATCCAGGGGTCGCCAGAGGC...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | GCTGGCAGGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTGCTCACTGTCTTCTTaGCTGAGAATGTTTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: AGRLWNACLAFCGAFGVLCSLSS*LRMFNW Trigger: CCAATTAAACATTCTCAGCCAAGAAGACAGTGAGCA...CAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCCTGCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTGAACAAGTAGGCCAATaGAGACAGAGTGAGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GEEECLVGVLTVFLAENVEQVGQ*RQSEGL Trigger: AAGACCCTCACTCTGTCTCCATTGGCCTACTTGTTC...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | GAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTGTCATGAATTTTTAGCTGACATTGTTTaGGAAATTGCTGGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EMITGALLLWQPRHCHEFLADIV*EIAGRL Trigger: GAGCCTGCCAGCAATTTCTCAAACAATGTCAGCTAA...AAATTCATGACAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR TCA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTGGATTCAGCGAATGAGTGAAAGATaGACAAGTAGGCCAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: GDRVRVLVGISMCRIWIQRMSER*TSRPME Trigger: CTCCATTGGCCTACTTGTTCATCTTTCACTCATTCG...CTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR GCA 90 bp | TGTTTAATTGGAAGAGTGGGCGCTCAGAGCTCCTACAAAGGCAGAGCAAAGCTTCATTGTTTGAGAAATTaGTGGCAGGCTCTGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: CLIGRVGAQSSYKGRAKLHCLRN*WQALEC Trigger: GCATTCCAGAGCCTGCCAGCAATTTCTCAAACAATG...AAGCTTTGCTCTGCCTTTGTAGGAGCTCTGAGCGCCCACTCTTCCAATTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTCATTGTTTGAGAAATTaGTGGCAGGCTCTGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: GEEECLVGVLTVFLAENVHCLRN*WQALEC Trigger: GCATTCCAGAGCCTGCCAGCAATTTCTCAAACAATG...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | TTTGAGAAATTGCTGGCAGGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTGTTTGAGAAATTGCTaGCAGGCTCTGGAATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FEKLLAGSGMLVWLSVVPCLRNC*QALECL Trigger: CAAGCATTCCAGAGCCTGCCAGCAATTTCTCAAACA...AGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCCTGCCAGCAATTTCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTCTGAGAATGTTTAATTaGAAGAGTGGGCGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GEEECLVGVLTVFLAENVLRMFN*KSGRSE Trigger: CTCTGAGCGCCCACTCTTCCAATTAAACATTCTCAG...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCCTGATCCCTGGGGATaGCTCAGGTCAGGATACTCA | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVPDPWG*LRSGYS Trigger: TGAGTATCCTGACCTGAGTCATCCCCAGGGATCAGG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | ATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGTGGGTCATCTGGTTGTaGATTGGCAGACCCCATTTG | + |
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Preference number: 4 (lower is better) Translates to: MCRIWIQSAVNRVKWVIWWVIWL*IGRPHL Trigger: CAAATGGGGTCTGCCAATTCACAACCAGATGACCCA...CCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR GCA 90 bp | ATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCACAACAGCATTGCTTTaGACTCACATTCTTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: MLVWLSVVPLVSCFLHIATTALL*THILGR Trigger: GCGGCCAAGAATGTGAGTGCAAAGCAATGCTGTTGT...GGCAATGTGAAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCTGAGAATGTTTAATTaGAAGAGTGGGCGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSGMLVWLSVVPLVSCFLLRMFN*KSGRSE Trigger: CTCTGAGCGCCCACTCTTCCAATTAAACATTCTCAG...AAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTTGCTCACTGTCTTCTTaGCTGAGAATGTTTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: GEEECLVGVLTVFLAENVCSLSS*LRMFNW Trigger: CCAATTAAACATTCTCAGCCAAGAAGACAGTGAGCA...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | GGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTGCAAAGCTTCTTAGCTaGCATTGTTTGAGAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: GSGMLVWLSVVPLVSCFLAKLLS*HCLRNC Trigger: GCAATTTCTCAAACAATGTCAGCTAAGAAGCTTTGC...AAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CCA 90 bp | ATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGTGTTTGAGAAATTGCTaGCAGGCTCTGGAATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: MCRIWIQSAVNRVKWVIWCLRNC*QALECL Trigger: CAAGCATTCCAGAGCCTGCCAGCAATTTCTCAAACA...CCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR GCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCATCGCAACTGTCGGTaGAGCTGTAAGTTGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVHRNCR*SCKLLE Trigger: TTCAAGCAACTTACAGCTGCACCGACAGTTGCGATG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCATCTGGTTGTGAATTaGCAGACCCCATTTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVHLVVN*QTPFEG Trigger: TCCTTCAAATGGGGTCTGCCAATTCACAACCAGATG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CCA 90 bp | ATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCATCTGGAGTATGTGTAGAATCTaGATTCAGTCTGCAGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: MCRIWIQSAVNRVKWVIWSMCRI*IQSAVN Trigger: ATTCACTGCAGACTGAATCCAGATTCTACACATACT...CCAGATGACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR TCA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCGCAAAGCTTCTTAGCTaGCATTGTTTGAGAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVAKLLS*HCLRNC Trigger: GCAATTTCTCAAACAATGTCAGCTAAGAAGCTTTGC...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS CCA 90 bp | GCTCTCAGGAACCAATCTTTGCACTCACATTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCCTGGCCTCGGTCCCTGTGGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ALRNQSLHSHSWPPS*SHLLEAWPRSLWPL Trigger: CAGAGGCCACAGGGACCGAGGCCAGGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAAGATTGGTTCCTGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS CCA 90 bp | TGGAACAACAGCATTGCTTTGCACTCACATTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCCTGGCCTCGGTCCCTGTGGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: WNNSIALHSHSWPPS*SHLLEAWPRSLWPL Trigger: CAGAGGCCACAGGGACCGAGGCCAGGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAAGCAATGCTGTTGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | AATTGCTGGCAGGCTCTGGAATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTTTTGCACTCACATTCTaGGCCGCCTTCCTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: NCWQALECLFGFLWCLWCFALTF*AAFLEP Trigger: TGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAA...ACACCAAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAGCCTGCCAGCAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTTTTGCACTCACATTCTaGGCCGCCTTCCTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GEEECLVGVLTVFLAENVFALTF*AAFLEP Trigger: TGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAA...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | GCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTGTCATGGTGCCTTTGGTGTCTaGTTTTCTTCACATTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ALEMITGALLLWQPRHCHGAFGV*FSSHCP Trigger: AGGGCAATGTGAAGAAAACAAGACACCAAAGGCACC...ATGACAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | GCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTGTCATCTCTGGAATGCTTGTTaGGCTTTCTGTGGTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ALEMITGALLLWQPRHCHLWNAC*AFCGAF Trigger: AAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAG...ATGACAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | GCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAGACACTGTCATACATTGTTTGAGAAATaGCTGGCAGGCTCTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: ALEMITGALLLWQPRHCHTLFEK*LAGSGM Trigger: CATTCCAGAGCCTGCCAGCAATTTCTCAAACAATGT...ATGACAGTGTCTGGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | TTTCTTCACATTGCCCTTGAAATGATCACAGGGGCACTGCTTCTTTGGCAGCCCAACAACAGCATTGCTTaGCACTCACATTCTTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: FLHIALEMITGALLLWQPNNSIA*HSHSWP Trigger: CGGCCAAGAATGTGAGTGCAAAGCAATGCTGTTGTT...GGGCTGCCAAAGAAGCAGTGCCCCTGTGATCATTTCAAGGGCAATGTGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTGGATTCAGCTCAGGAACCAATCTTaGCACTCACATTCTTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: GDRVRVLVGISMCRIWIQLRNQS*HSHSWP Trigger: CGGCCAAGAATGTGAGTGCAAAGATTGGTTCCTGAG...CTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | GGAGACAGAGTGAGGGTCTTGGTGGGGATAAGTATGTGTAGAATCTGGATTCAGGACAGAGTGAGGGTCTaGGTGGGGATAAGTATGTGT | + |
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Preference number: 5 (lower is better) Translates to: GDRVRVLVGISMCRIWIQDRVRV*VGISMC Trigger: ACACATACTTATCCCCACCAAGACCCTCACTCTGTC...CTGAATCCAGATTCTACACATACTTATCCCCACCAAGACCCTCACTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTGGTGCCTTTGGTGTCTaGTTTTCTTCACATTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GEEECLVGVLTVFLAENVGAFGV*FSSHCP Trigger: AGGGCAATGTGAAGAAAACAAGACACCAAAGGCACC...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCCAGGCTCTGGAATGCTaGTTTGGCTTTCTGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: MLVWLSVVPLVSCFLHIAQALEC*FGFLWC Trigger: GCACCACAGAAAGCCAAACAAGCATTCCAGAGCCTG...GGCAATGTGAAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTCTTTCTGTGGTGCCTTaGGTGTCTTGTTTTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: GEEECLVGVLTVFLAENVLSVVP*VSCFLH Trigger: GTGAAGAAAACAAGACACCAAAGGCACCACAGAAAG...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTGTTTGGCTTTCTGTGGTGCCTTTGGTGTCTTGTTTTCTTCACATTGCCCTTTCTGTGGTGCCTTaGGTGTCTTGTTTTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: MLVWLSVVPLVSCFLHIALSVVP*VSCFLH Trigger: GTGAAGAAAACAAGACACCAAAGGCACCACAGAAAG...GGCAATGTGAAGAAAACAAGACACCAAAGGCACCACAGAAAGCCAAACAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS-3UTR CAA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCAGGCTCTGGAATGCTaGTTTGGCTTTCTGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVQALEC*FGFLWC Trigger: GCACCACAGAAAGCCAAACAAGCATTCCAGAGCCTG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | GGAGAAGAAGAGTGTCTGGTAGGTGTGCTCACTGTCTTCTTGGCTGAGAATGTTGCAGCTGTAAGTTGCTaGAAGAATATAATGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GEEECLVGVLTVFLAENVAAVSC*KNIMEG Trigger: ACCTTCCATTATATTCTTCAAGCAACTTACAGCTGC...AACATTCTCAGCCAAGAAGACAGTGAGCACACCTACCAGACACTCTTCTTCTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCCTCTGGAATGCTTGTTaGGCTTTCTGTGGTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVLWNAC*AFCGAF Trigger: AAAGGCACCACAGAAAGCCAAACAAGCATTCCAGAG...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS-3UTR CAA 90 bp | ATAAGTATGTGTAGAATCTGGATTCAGTCTGCAGTGAATAGGGTAAAATGGGTCACATTGTTTGAGAAATaGCTGGCAGGCTCTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: ISMCRIWIQSAVNRVKWVTLFEK*LAGSGM Trigger: CATTCCAGAGCCTGCCAGCAATTTCTCAAACAATGT...GACCCATTTTACCCTATTCACTGCAGACTGAATCCAGATTCTACACATACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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| CDS CCA 72 bp | TGGAGCCATCTCCTAGAAGCCTGGCCTCGGTCCCTGTaGCCTCTGGCGACCCCTGGATTCAGGCTGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: WSHLLEAWPRSL*PLATPGFRLLE Trigger: CTCTAGCAGCCTGAATCCAGGGGTCGCCAGAGGCCACAGGGACCGAGGCCAGGCTTCTAGGAGATGGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341918.4 ENST00000601181.6 |
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| CDS CCA 72 bp | AGCATTGCTTTGCACTCACATTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCCTGGCCTCGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SIALHSHSWPPS*SHLLEAWPRSL Trigger: CAGGGACCGAGGCCAGGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAAGCAATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341918.4 |
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| CDS CCA 72 bp | AACCAATCTTTGCACTCACATTCTTGGCCGCCTTCCTaGAGCCATCTCCTAGAAGCCTGGCCTCGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: NQSLHSHSWPPS*SHLLEAWPRSL Trigger: CAGGGACCGAGGCCAGGCTTCTAGGAGATGGCTCCAGGAAGGCGGCCAAGAATGTGAGTGCAAAGATTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601181.6 |
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