Pregenerated sensors for CUTC (Homo sapiens)
Ensembl gene IDs: ENSG00000119929Ensembl transcript IDs: ENST00000370472.4, ENST00000370476.10, ENST00000471520.5, ENST00000493385.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCGAAACTTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTaGAATTCTGTAGCACCTGAACCCTCAAGGATCCTTTGTAGATTT | + |
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Preference number: 1 (lower is better) Translates to: FRNFIPESLVDRAEQ*NSVAPEPSRILCRF Trigger: AAATCTACAAAGGATCCTTGAGGGTTCAGGTGCTACAGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| 3UTR CCA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATaGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGT | + |
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Preference number: 1 (lower is better) Translates to: SSSINSTENRLSFCL*KKHRPALTMMTITG Trigger: ACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGCTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATTCTACCTTCATCCTGTaGTATCCATGTCTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKLLSMEEAQTSFNHDDNSTFIL*YPCLSE Trigger: CTCTGAGAGACATGGATATCACAGGATGAAGGTAGA...ATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| 3UTR CCA 72 bp | TTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTaGAATTCTGTAGCACCTGAACCCTCAAGGATCCTT | + |
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Preference number: 3 (lower is better) Translates to: FIPESLVDRAEQ*NSVAPEPSRIL Trigger: AAGGATCCTTGAGGGTTCAGGTGCTACAGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| 3UTR CCA 72 bp | TTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATaGCAACAGATGAATTTCGAAACTTCATTCCCGAGT | + |
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Preference number: 3 (lower is better) Translates to: LGNILSKKVRLP*QQMNFETSFPS Trigger: ACTCGGGAATGAAGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| 3UTR CCA 72 bp | ATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATaGAAGAAGCACAGACCAGCTTTAACCATGATGACA | + |
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Preference number: 3 (lower is better) Translates to: INSTENRLSFCL*KKHRPALTMMT Trigger: TGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | ACTAAGCTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATAAGCGCGTCAACAGCTaGGCGCGCCCGTGCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: TKLLSMEEAQTSFNHDDNKRVNS*ARPCAR Trigger: ACGCGCGCACGGGCGCGCGCAGCTGTTGACGCGCTT...ATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | GATGAATTTCGAAACTTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGCGCGTTCCTCCCTCGTaGGCCTGCAGTTTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: DEFRNFIPESLVDRAEQWRVPPS*ACSFHL Trigger: CAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCG...CCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGAAATTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | AGTGAGGCTCCCATGGCAACAGATGAATTTCGAAACTTCATTCCCGAGTCTCTATCAGAGGAGGCCCCCTaGCTTTTCATGCTCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: SEAPMATDEFRNFIPESLSEEAP*LFMLHA Trigger: CGCGTGGAGCATGAAAAGGCAGGGGGCCTCCTCTGA...TAGAGACTCGGGAATGAAGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | TTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGAATTCTGTAGCACCTCCTGCAGTTTCCACTTaGAATTTGGGCTCCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: FIPESLVDRAEQWNSVAPPAVST*NLGSGA Trigger: CGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGG...AGGTGCTACAGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR TCA 90 bp | ACATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAAGGCTCGGTGGAAAGTaGCTGGCAGAGGGCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSVTFREYSEQESEAPMARLGGK*LAEGGK Trigger: TTTGCCGCCCTCTGCCAGTCACTTTCCACCGAGCCT...TGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | AAAGATTGCGACTGTCCTGGCCAGAGAAGAAGGTTAAAGCTGTGTCATAGAGAACGCGTTCCTCCCTCGTaGGCCTGCAGTTTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: KDCDCPGQRRRLKLCHRERVPPS*ACSFHL Trigger: CAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCG...TTCTCTATGACACAGCTTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | GCAGAACAGTGGAATTCTGTAGCACCTGAACCCTCAAGGATCCTTTGTAGATTTCCCCCTGCCTTTTCATaGTCCACGCGTTCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: AEQWNSVAPEPSRILCRFPPAFS*STRSSL Trigger: GAGGGAGGAACGCGTGGAGCATGAAAAGGCAGGGGG...AAATCTACAAAGGATCCTTGAGGGTTCAGGTGCTACAGAATTCCACTGTTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGCCCCCTGCCTTTTCATaGTCCACGCGTTCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKPPAFS*STRSSL Trigger: GAGGGAGGAACGCGTGGAGCATGAAAAGGCAGGGGG...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTTCAGAGGAGGCCCCCTaGCTTTTCATGCTCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATSEEAP*LFMLHA Trigger: CGCGTGGAGCATGAAAAGGCAGGGGGCCTCCTCTGA...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | TTTCGAAACTTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGAATTCTTTTCCACTTGGAATTTaGGCTCCGGCGCGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRNFIPESLVDRAEQWNSFPLGI*APARTS Trigger: GCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAA...AGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | CTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGCCTGCAGTTTCCACTTaGAATTTGGGCTCCGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSMEEAQTSFNHDDNHWPAVST*NLGSGA Trigger: CGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGG...CCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGTCGGTGGAAAGTGACTaGCAGAGGGCGGCAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: LLPLGNILSKKVRLPWQQSVESD*QRAANS Trigger: GCTATTTGCCGCCCTCTGCCAGTCACTTTCCACCGA...CTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR TCA 90 bp | AAAGTGAGGCTCCCATGGCAACAGATGAATTTCGAAACTTCATTCCCGAGTCTCCTCTGCTTCACTACTTaGAGGACACCCATGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KVRLPWQQMNFETSFPSLLCFTT*RTPMLG Trigger: ACCCAGCATGGGTGTCCTTCAAGTAGTGAAGCAGAG...GAGACTCGGGAATGAAGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | ATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTGTCCTGGCCAGATCGGTGGAAAGTGACTaGCAGAGGGCGGCAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: ILHGHVKLKTKIATVLARSVESD*QRAANS Trigger: GCTATTTGCCGCCCTCTGCCAGTCACTTTCCACCGA...TCTGGCCAGGACAGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | AGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGAATTTCGAGCTGCCATTGGATCATaGACCATGTCAAAGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: REYSEQESEAPMATDEFRAAIGS*TMSKAR Trigger: CCGAGCCTTTGACATGGTTCATGATCCAATGGCAGC...TCGAAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | ACTAAGCTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATTTTCCACTTGGAATTTaGGCTCCGGCGCGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TKLLSMEEAQTSFNHDDNFPLGI*APARTS Trigger: GCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAA...ATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | ATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTGTCCTGGCCAGAATGTCAAAGGCTCGGTaGAAAGTGACTGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ILHGHVKLKTKIATVLARMSKAR*KVTGRG Trigger: CCCTCTGCCAGTCACTTTCCACCGAGCCTTTGACAT...TCTGGCCAGGACAGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | ACATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAATGTCAAAGGCTCGGTaGAAAGTGACTGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSVTFREYSEQESEAPMAMSKAR*KVTGRG Trigger: CCCTCTGCCAGTCACTTTCCACCGAGCCTTTGACAT...TGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR TCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTCTCTGCTTCACTACTTaGAGGACACCCATGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATLCFTT*RTPMLG Trigger: ACCCAGCATGGGTGTCCTTCAAGTAGTGAAGCAGAG...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTGCTGCCATTGGATCATaGACCATGTCAAAGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATAAIGS*TMSKAR Trigger: CCGAGCCTTTGACATGGTTCATGATCCAATGGCAGC...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | ACATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCACCACCTCCTGCTCAATaGGTCGCTTTATTAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TSVTFREYSEQESEAPMAPPPAQ*VALLGV Trigger: TACCCCTAATAAAGCGACTCATTGAGCAGGAGGTGG...TGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGCCTCCCTCGTGCGCCTaGAGTTTCCACTTGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKPPSCA*SFHLEF Trigger: AAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGG...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGCATGAGAAATCCATTTaGTGCTCCGGCCTTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKHEKSI*CSGLPG Trigger: TCCGGGAAGGCCGGAGCAGCAAATGGATTTCTCATG...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGAGGCTCGGTGGAAAGTaGCTGGCAGAGGGCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSSINSTENRLSFCLWKKRLGGK*LAEGGK Trigger: TTTGCCGCCCTCTGCCAGTCACTTTCCACCGAGCCT...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | TTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGGAATTCTGTAGCACCTaGACCCTCAAGGATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LPLGNILSKKVRLPWQQMEFCST*TLKDPL Trigger: CAAAGGATCCTTGAGGGTTCAGGTGCTACAGAATTC...CATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | TTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGAATTTCCTCCCTCGTGCGCCTaGAGTTTCCACTTGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: FREYSEQESEAPMATDEFPPSCA*SFHLEF Trigger: AAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGG...AAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | TTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGAATTTCATGAGAAATCCATTTaGTGCTCCGGCCTTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FREYSEQESEAPMATDEFHEKSI*CSGLPG Trigger: TCCGGGAAGGCCGGAGCAGCAAATGGATTTCTCATG...AAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | ACATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCACAGCACCATAAAGCTTaGCAAGACGAATGTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TSVTFREYSEQESEAPMAQHHKA*QDECQP Trigger: AGGCTGACATTCGTCTTGCCAAGCTTTATGGTGCTG...TGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | CTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGAACTGTCACATCCACTaGTCAACACGCGTTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: LLPLGNILSKKVRLPWQQNCHIH*STRVQI Trigger: GATTTGAACGCGTGTTGACCAGTGGATGTGACAGTT...CTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | ATTTCGAAACTTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGAATTCGACCGAGCAGAACAGTaGAATTCTGTAGCACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ISKLHSRVSSRPSRTVEFDRAEQ*NSVAPE Trigger: TTCAGGTGCTACAGAATTCCACTGTTCTGCTCGGTC...GAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | TTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGAATTCTGTAGCACCTAAAGTGAGGCTCCCATaGCAACAGATGAATTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: FIPESLVDRAEQWNSVAPKVRLP*QQMNFE Trigger: TTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTT...AGGTGCTACAGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR GCA 90 bp | CTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGTCCATCTTCAGTCAATaGCCCAAAAACCAAACCATC | + |
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Preference number: 4 (lower is better) Translates to: LLPLGNILSKKVRLPWQQSIFSQ*PKNQTI Trigger: GATGGTTTGGTTTTTGGGGCATTGACTGAAGATGGA...CTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGCAGCACCATAAAGCTTaGCAAGACGAATGTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKQHHKA*QDECQP Trigger: AGGCTGACATTCGTCTTGCCAAGCTTTATGGTGCTG...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGAATTTCGAAACTTCATTCCTCCAGAGCTGCCATTaGATCATGAACCATGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSKKVRLPWQQMNFETSFLQSCH*IMNHVK Trigger: TTTGACATGGTTCATGATCCAATGGCAGCTCTGGAG...GAATGAAGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CCA 90 bp | AAAGATTGCGACTGTCCTGGCCAGAGAAGAAGGTTAAAGCTGTGTCATAGAGAAAACTGTCACATCCACTaGTCAACACGCGTTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: KDCDCPGQRRRLKLCHRENCHIH*STRVQI Trigger: GATTTGAACGCGTGTTGACCAGTGGATGTGACAGTT...TTCTCTATGACACAGCTTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGTGTTATACCACCTCCTaGCATTACCACAATCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKCYTTS*HYHNPA Trigger: GGCAGGATTGTGGTAATGCCAGGAGGTGGTATAACA...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTGACCGAGCAGAACAGTaGAATTCTGTAGCACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATDRAEQ*NSVAPE Trigger: TTCAGGTGCTACAGAATTCCACTGTTCTGCTCGGTC...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTTCTCTCAGAGAGGTCTaGCTACACCAGGATGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATSLREV*LHQDVL Trigger: AAGAACATCCTGGTGTAGCCAGACCTCTCTGAGAGA...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGAGATTGCGACTGTCCTaGCCAGAGAAGAAGGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSMEEAQTSFNHDDNHWRLRLS*PEKKVK Trigger: TTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCT...CCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | ATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTGTCCTGGCCAGACAACACAAACTTCCATaGGAAATCCATTTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILHGHVKLKTKIATVLARQHKLP*EIHLLL Trigger: GAGCAGCAAATGGATTTCTCATGGAAGTTTGTGTTG...TCTGGCCAGGACAGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | CTTCTTGGGCACATTCTCCATGGCCATGTGAAACTTAAAACAAAGATTGCGACTCTTTTGCCTGCTCAATaGGTCGCTTTATTAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGHILHGHVKLKTKIATLLPAQ*VALLGV Trigger: TACCCCTAATAAAGCGACTCATTGAGCAGGCAAAAG...AGTCGCAATCTTTGTTTTAAGTTTCACATGGCCATGGAGAATGTGCCCAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | GAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAACAGATGAATTTCGAAACCAACACAAACTTCCATaGGAAATCCATTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EYSEQESEAPMATDEFRNQHKLP*EIHLLL Trigger: GAGCAGCAAATGGATTTCTCATGGAAGTTTGTGTTG...GTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR TCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGACAAAAACTGGGATCTaGACACTCTGCTTCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKTKTGI*TLCFTT Trigger: AGTAGTGAAGCAGAGTGTTCAGATCCCAGTTTTTGT...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | ACTAAGCTTCTGTCTATGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCTAAGCTTCTGTCTATaGAAGAAGCACAGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKLLSMEEAQTSFNHDDNLSFCL*KKHRPA Trigger: AGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAG...ATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCATAGACAGAAGCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGGAATTCTGTAGCACCTaGACCCTCAAGGATCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSINSTENRLSFCLWKKEFCST*TLKDPL Trigger: CAAAGGATCCTTGAGGGTTCAGGTGCTACAGAATTC...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGAATCATCACAAAAACTaGGATCTGAACACTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKKHRPALTMMTITGKTKNHHKN*DLNTLL Trigger: AAGCAGAGTGTTCAGATCCCAGTTTTTGTGATGATT...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CATAGAGAATTGCAGATTATAGTTCTACCTTCATCCTGTGATATCCATGTCTCTCTCCAGAGCTGCCATTaGATCATGAACCATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRELQIIVLPSSCDIHVSLQSCH*IMNHVK Trigger: TTTGACATGGTTCATGATCCAATGGCAGCTCTGGAG...AGAGACATGGATATCACAGGATGAAGGTAGAACTATAATCTGCAATTCTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGTCTACCTTCATCCTGTaGTATCCATGTCTCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSINSTENRLSFCLWKKSTFIL*YPCLSE Trigger: CTCTGAGAGACATGGATATCACAGGATGAAGGTAGA...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR GCA 90 bp | CATAGAGAATTGCAGATTATAGTTCTACCTTCATCCTGTGATATCCATGTCTCTTCCATCTTCAGTCAATaGCCCAAAAACCAAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: HRELQIIVLPSSCDIHVSSIFSQ*PKNQTI Trigger: GATGGTTTGGTTTTTGGGGCATTGACTGAAGATGGA...AGAGACATGGATATCACAGGATGAAGGTAGAACTATAATCTGCAATTCTCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CCA 90 bp | CATAGAGAATTGCAGATTATAGTTCTACCTTCATCCTGTGATATCCATGTCTCTAAAGTGAGGCTCCCATaGCAACAGATGAATTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRELQIIVLPSSCDIHVSKVRLP*QQMNFE Trigger: TTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTT...AGAGACATGGATATCACAGGATGAAGGTAGAACTATAATCTGCAATTCTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR TCA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGAATACTGCTTTGAATTaGCCCTTAAGTCACACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSINSTENRLSFCLWKKNTALN*PLSHTL Trigger: CAGAGTGTGACTTAAGGGTCAATTCAAAGCAGTATT...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS GCA 90 bp | GGCCCCCTGCCTTTTCATGCTCCACGCGTTCCTCCCTCGTGCGCCTaGAGTTTCCACTTGGAATTTGGGCTCCGGCGCGCACCAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPFHAPRVPPSCA*SFHLEFGLRRAPAK Trigger: CTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGGAGCATGAAAAGGCAGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS GCA 90 bp | AGAGGAGGCCCCCTGCCTTTTCATGCTCCACGCGTTCCTCCCTCGTaGGCCTGCAGTTTCCACTTGGAATTTGGGCTCCGGCGCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RGGPLPFHAPRVPPS*ACSFHLEFGLRRAP Trigger: TGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGGAGCATGAAAAGGCAGGGGGCCTCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370476.10 ENST00000471520.5 |
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| CDS CCA 90 bp | TTCATGCTCCACGCGTTCCTCCCTCGTGCGCCTGCAGTTTCCACTTaGAATTTGGGCTCCGGCGCGCACCAGCTAAGAAGCGCGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: FMLHAFLPRAPAVST*NLGSGAHQLRSAST Trigger: TGTTGACGCGCTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGGAGCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | AAAGATTGCGACTGTCCTGGCCAGAGAAGAAGGTTAAAGCTGTGTCATAGAGAAGTTTCCACTTGGAATTaGGGCTCCGGCGCGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDCDCPGQRRRLKLCHREVSTWN*GSGAHQ Trigger: CTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAAC...TTCTCTATGACACAGCTTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | CATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCAAGTTTCCACTTGGAATTaGGGCTCCGGCGCGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLLPLGNILSKKVRLPWQVSTWN*GSGAHQ Trigger: CTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAAC...TTGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CAA 90 bp | AAAGATTGCGACTGTCCTGGCCAGAGAAGAAGGTTAAAGCTGTGTCATAGAGAAGCCTGCAGTTTCCACTaGGAATTTGGGCTCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KDCDCPGQRRRLKLCHREACSFH*EFGLRR Trigger: GCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGC...TTCTCTATGACACAGCTTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | TTTCGAAACTTCATTCCCGAGTCTCTAGTAGACCGAGCAGAACAGTGGAATTCTGCCTGCAGTTTCCACTaGGAATTTGGGCTCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRNFIPESLVDRAEQWNSACSFH*EFGLRR Trigger: GCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGC...AGAATTCCACTGTTCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS CCA 90 bp | GCTTTATTAGGGGTAGCCCTTCTAATGCTGAACTGTCACATCCACTaGTCAACACGCGTTCAAATCCCAAGGTTAAGAGGGTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLGVALLMLNCHIH*STRVQIPRLRGSPE Trigger: CTCTGGAGACCCTCTTAACCTTGGGATTTGAACGCGTGTTGACCAGTGGATGTGACAGTTCAGCATTAGAAGGGCTACCCCTAATAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 |
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| CDS GCA 90 bp | AAGGGACATACACAGCTCTTTGTCAATGTGTCCATCTTCAGTCAATaGCCCAAAAACCAAACCATCAGCACCATAAAGCTTGGCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KGHTQLFVNVSIFSQ*PKNQTISTIKLGKT Trigger: CGTCTTGCCAAGCTTTATGGTGCTGATGGTTTGGTTTTTGGGGCATTGACTGAAGATGGACACATTGACAAAGAGCTGTGTATGTCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 |
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| CDS CCA 90 bp | CTTCAGTCAATGCCCCAAAAACCAAACCATCAGCACCATAAAGCTTaGCAAGACGAATGTCAGCCTTCATCACCTCAATTTCACGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSMPQKPNHQHHKA*QDECQPSSPQFHDL Trigger: CAGATCGTGAAATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTTATGGTGCTGATGGTTTGGTTTTTGGGGCATTGACTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 ENST00000493385.5 |
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| CDS-3UTR CAA 90 bp | ACATCTGTTACCTTTAGGGAATATTCTGAGCAAGAAAGTGAGGCTCCCATGGCATCTCCAGAGCTGCCATaGGATCATGAACCATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TSVTFREYSEQESEAPMASPELP*DHEPCQ Trigger: TTGACATGGTTCATGATCCAATGGCAGCTCTGGAGA...TGCCATGGGAGCCTCACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CAA 90 bp | AAAGTGAGGCTCCCATGGCAACAGATGAATTTCGAAACTTCATTCCCGAGTCTCGACATACACAGCTCTTaGTCAATGTGTCCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVRLPWQQMNFETSFPSLDIHSS*SMCPSS Trigger: TGAAGATGGACACATTGACAAAGAGCTGTGTATGTC...GAGACTCGGGAATGAAGTTTCGAAATTCATCTGTTGCCATGGGAGCCTCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471520.5 |
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| CDS-3UTR CAA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGTCTCCAGAGCTGCCATaGGATCATGAACCATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WKKHRPALTMMTITGKTKSPELP*DHEPCQ Trigger: TTGACATGGTTCATGATCCAATGGCAGCTCTGGAGA...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | AAAGATTGCGACTGTCCTGGCCAGAGAAGAAGGTTAAAGCTGTGTCATAGAGAAGACATACACAGCTCTTaGTCAATGTGTCCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDCDCPGQRRRLKLCHREDIHSS*SMCPSS Trigger: TGAAGATGGACACATTGACAAAGAGCTGTGTATGTC...TTCTCTATGACACAGCTTTAACCTTCTTCTCTGGCCAGGACAGTCGCAATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGACTCTGCTTCACTACTaGAAGGACACCCATGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSINSTENRLSFCLWKKTLLHY*KDTHAG Trigger: CCCAGCATGGGTGTCCTTCAAGTAGTGAAGCAGAGT...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | TGGAAGAAGCACAGACCAGCTTTAACCATGATGACAATCACTGGTAAGACTAAGAAATACTGCTTTGAATaGACCCTTAAGTCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: WKKHRPALTMMTITGKTKKYCFE*TLKSHS Trigger: AGAGTGTGACTTAAGGGTCAATTCAAAGCAGTATTT...CTTAGTCTTACCAGTGATTGTCATCATGGTTAAAGCTGGTCTGTGCTTCTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS-3UTR CAA 90 bp | AGTTCATCAATTAATTCCACTGAAAACAGACTAAGCTTCTGTCTATGGAAGAAGAACTTAAAACAAAGATaGCGACTGTCCTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSINSTENRLSFCLWKKNLKQR*RLSWPE Trigger: CTCTGGCCAGGACAGTCGCAATCTTTGTTTTAAGTT...CTTCTTCCATAGACAGAAGCTTAGTCTGTTTTCAGTGGAATTAATTGATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CAA 90 bp | CTCCACGCGTTCCTCCCTCGTGCGCCTGCAGTTTCCACTTGGAATTaGGGCTCCGGCGCGCACCAGCTAAGAAGCGCGTCAACAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LHAFLPRAPAVSTWN*GSGAHQLRSASTAA Trigger: CGCAGCTGTTGACGCGCTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CCA 72 bp | CACGCGTTCCTCCCTCGTGCGCCTGCAGTTTCCACTTaGAATTTGGGCTCCGGCGCGCACCAGCTAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HAFLPRAPAVST*NLGSGAHQLRS Trigger: GCTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CAA 72 bp | CCACGCGTTCCTCCCTCGTGCGCCTGCAGTTTCCACTaGGAATTTGGGCTCCGGCGCGCACCAGCTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRVPPSCACSFH*EFGLRRAPAKK Trigger: CTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CAA 72 bp | TTCCTCCCTCGTGCGCCTGCAGTTTCCACTTGGAATTaGGGCTCCGGCGCGCACCAGCTAAGAAGCGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLPRAPAVSTWN*GSGAHQLRSAS Trigger: TGACGCGCTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CAA 90 bp | TTTCATGCTCCACGCGTTCCTCCCTCGTGCGCCTGCAGTTTCCACTaGGAATTTGGGCTCCGGCGCGCACCAGCTAAGAAGCGCGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: FHAPRVPPSCACSFH*EFGLRRAPAKKRVN Trigger: GTTGACGCGCTTCTTAGCTGGTGCGCGCCGGAGCCCAAATTCCAAGTGGAAACTGCAGGCGCACGAGGGAGGAACGCGTGGAGCATGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370476.10 |
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| CDS CCA 72 bp | GGGGTAGCCCTTCTAATGCTGAACTGTCACATCCACTaGTCAACACGCGTTCAAATCCCAAGGTTAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVALLMLNCHIH*STRVQIPRLRG Trigger: CCCTCTTAACCTTGGGATTTGAACGCGTGTTGACCAGTGGATGTGACAGTTCAGCATTAGAAGGGCTACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 |
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| CDS TCA 72 bp | TCACAGCTGATTCCACTGAATCAACACAAACTTCCATaGGAAATCCATTTGCTGCTCCGGCCTTCCCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SQLIPLNQHKLP*EIHLLLRPSRT Trigger: CGTCCGGGAAGGCCGGAGCAGCAAATGGATTTCTCATGGAAGTTTGTGTTGATTCAGTGGAATCAGCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370476.10 ENST00000471520.5 |
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| CDS CCA 72 bp | ATCATGAACCATGTCAAAGGCTCGGTGGAAAGTGACTaGCAGAGGGCGGCAAATAGCCATAAGGGACATACA | + |
|
Preference number: 6 (lower is better) Translates to: IMNHVKGSVESD*QRAANSHKGHT Trigger: TGTATGTCCCTTATGGCTATTTGCCGCCCTCTGCCAGTCACTTTCCACCGAGCCTTTGACATGGTTCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 |
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| CDS CCA 72 bp | ATGCCCCAAAAACCAAACCATCAGCACCATAAAGCTTaGCAAGACGAATGTCAGCCTTCATCACCTCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: MPQKPNHQHHKA*QDECQPSSPQF Trigger: AAATTGAGGTGATGAAGGCTGACATTCGTCTTGCCAAGCTTTATGGTGCTGATGGTTTGGTTTTTGGGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000370472.4 ENST00000370476.10 ENST00000471520.5 ENST00000493385.5 |
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| CDS TCA 72 bp | TCATTCCCACAGAGAAGCCAAATTGGGTTGAAATATTaGTACAGTAGACAACCACTGAATAATTCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPQRSQIGLKY*YSRQPLNNSTS Trigger: AGATGTGGAATTATTCAGTGGTTGTCTACTGTATCAATATTTCAACCCAATTTGGCTTCTCTGTGGGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493385.5 |
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