RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUTA (Homo sapiens)

Ensembl gene IDs: ENSG00000112514, ENSG00000226492

Ensembl transcript IDs: ENST00000374484.8, ENST00000374496.3, ENST00000374500.10, ENST00000435267.6, ENST00000440279.7, ENST00000440930.6, ENST00000461913.5, ENST00000464657.5, ENST00000465956.1, ENST00000468782.1, ENST00000479249.5, ENST00000480120.5, ENST00000480677.5, ENST00000482684.5, ENST00000485890.1, ENST00000486590.1, ENST00000487148.5, ENST00000487637.1, ENST00000488034.6, ENST00000488478.5, ENST00000492510.1, ENST00000494751.5, ENST00000607266.5

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCCGAGGCCGGCGAGGGCTGGGTCGGAGGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGCCACAG +
Preference number: 1 (lower is better)
Translates to: NPRPARAGSEGFQRP*SARLGVATKGGRPQ
Trigger: CTGTGGCCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTCGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR GCA 90 bp GGCGATCTCCTTGGCGACCTTCTCGTTGGGGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAACGTAGCCAGAGCCGGAATCCGAGGC +
Preference number: 1 (lower is better)
Translates to: GDLLGDLLVGASNKG*RDRARNVARAGIRG
Trigger: GCCTCGGATTCCGGCTCTGGCTACGTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR TCA 90 bp CAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCACCCACTGCAGGTACGGAAAGTTCCC +
Preference number: 1 (lower is better)
Translates to: QEQGSSWQDCDRVRN*LCDLAHPLQVRKVP
Trigger: GGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR CCA 90 bp CATCATGGCAGGACTGTGATAGAGTCAGAAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGC +
Preference number: 1 (lower is better)
Translates to: HHGRTVIESETDSVT*RTHCRYGKFPCSTG
Trigger: GCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCTGCCATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR GCA 90 bp GCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATaGAATTACCTCGGCCACTTCGTAAGGGTGCACAGAACGAACAAA +
Preference number: 1 (lower is better)
Translates to: AHPLQVRKVPLFHRQ*NYLGHFVRVHRTNK
Trigger: TTTGTTCGTTCTGTGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR TCA 90 bp GGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCAT +
Preference number: 1 (lower is better)
Translates to: GIYWGPSHHLEVRRR*SIAGIFMMSRNRAH
Trigger: ATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
3UTR GCA 90 bp ACTGTGATAGAGTCAGAAACTGACTCTGTGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACC +
Preference number: 1 (lower is better)
Translates to: TVIESETDSVTWRTH*RYGKFPCSTGNAIT
Trigger: GGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR GCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRRTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp GCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 2 (lower is better)
Translates to: AGTESSPVPQAMQLPRPLSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...AAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR-3UTR GCA 90 bp GCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: ALKYRGDLHDEQEQGSSWTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR GCA 90 bp AGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGTGCAACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SSPVPQAMQLPRPLRKGATWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...TGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRRTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR TCA 90 bp AGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 2 (lower is better)
Translates to: RYGKFPCSTGNAITSATSQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...CGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR CAA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: RDLLGAQSSPGSQKA*KYRGDLHDEQEQGS
Trigger: TGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
3UTR-3UTR TCA 90 bp GGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 2 (lower is better)
Translates to: GKRQRDPKTGFIGGPVITEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...GGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
3UTR-3UTR CCA 90 bp TTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 2 (lower is better)
Translates to: LKYRGDLHDEQEQGSSWQGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...CTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR-3UTR TCA 90 bp GCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 2 (lower is better)
Translates to: AGTESSPVPQAMQLPRPLDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...AAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR TCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 2 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVIEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
3UTR-3UTR CCA 90 bp GCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 2 (lower is better)
Translates to: AKGRETQRRDLLGAQSSPKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
3UTR-3UTR CCA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 2 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp ACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 2 (lower is better)
Translates to: TESSPVPQAMQLPRPLRKKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...CTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp AGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGTGCAAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 2 (lower is better)
Translates to: SSPVPQAMQLPRPLRKGAKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...TGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp AAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCAAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 2 (lower is better)
Translates to: KALKYRGDLHDEQEQGSSKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...TGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CCA 90 bp AAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATCAGCACAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 2 (lower is better)
Translates to: KICQSWDQGTLGFNHHQHKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...GTGCTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR GCA 72 bp CTTGGCGACCTTCTCGTTGGGGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAACGTAGCCAGAGCCGGA +
Preference number: 3 (lower is better)
Translates to: LGDLLVGASNKG*RDRARNVARAG
Trigger: TCCGGCTCTGGCTACGTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR-3UTR CAA 90 bp CTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGTGCACAGAACGGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 3 (lower is better)
Translates to: LFHRQCNYLGHFVRVHRTALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...CGTTCTGTGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR TCA 72 bp TGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTCATGATGAGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: WGPSHHLEVRRR*SIAGIFMMSRN
Trigger: GTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
3UTR GCA 72 bp GAGTCAGAAACTGACTCTGTGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCCTGTTCCACAGGCAAT +
Preference number: 3 (lower is better)
Translates to: ESETDSVTWRTH*RYGKFPCSTGN
Trigger: ATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR GCA 72 bp CTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATaGAATTACCTCGGCCACTTCGTAAGGGTGCACAGA +
Preference number: 3 (lower is better)
Translates to: LQVRKVPLFHRQ*NYLGHFVRVHR
Trigger: TCTGTGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR CCA 72 bp AGGACTGTGATAGAGTCAGAAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: RTVIESETDSVT*RTHCRYGKFPC
Trigger: ACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR CCA 72 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCT +
Preference number: 3 (lower is better)
Translates to: PKTGFIGGPVIT*KSEGVEVSRGS
Trigger: AGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
3UTR CCA 72 bp AGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGT +
Preference number: 3 (lower is better)
Translates to: RQKAERPKDGIY*GPSHHLEVRRR
Trigger: ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
3UTR-3UTR CAA 90 bp TCTGTGACCTGGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: SVTWRTHCRYGKFPCSTGWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...GCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
3UTR-3UTR CAA 90 bp GTTGGGGCAAGTAACAAAGGCTGCAGAGACCGAGCCCGGAACGTAGCCAGAGCCTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: VGASNKGCRDRARNVARAWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...GGCTCTGGCTACGTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGCCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR-3UTR CAA 90 bp GCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 3 (lower is better)
Translates to: AGTESSPVPQAMQLPRPLLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...AAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR-3UTR CAA 90 bp GCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: ALKYRGDLHDEQEQGSSWWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...CCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRREAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLGAQSSPGSQKALKYRGEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...CCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GRETQRRDLLGAQSSPGSEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...ACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp TCTGTGACCTGGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SVTWRTHCRYGKFPCSTGPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...GCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp AGGCCACAGGCAGCAGCGCCGGCATCCAAACAAAAGACAGGAGCAGAGAGGCACCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPQAAAPASKQKTGAERHPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...GTGCCTCTCTGCTCCTGTCTTTTGTTTGGATGCCGGCGCTGCTGCCTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GGCTTCCAGAGGCCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: GFQRPWSARLGVATKGGRSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...CCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGCCACAGGCAGCATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PWSARLGVATKGGRPQAASPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TGCTGCCTGTGGCCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
3UTR CAA 72 bp ACCACGGCCCTGGCGATCTCCTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCTGCAGAGACCGAGCCC +
Preference number: 4 (lower is better)
Translates to: TTALAISLATFS*GQVTKAAETEP
Trigger: GGGCTCGGTCTCTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGCCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR TCA 90 bp GGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTGCTCTGCCCTCCCTCTaGTGCACCCCCGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: GGPVITWKSEGVEVSRGSALPSL*CTPEEC
Trigger: GCATTCTTCGGGGGTGCATCAGAGGGAGGGCAGAGC...AGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000440279.7
ENST00000487148.5
ENST00000494751.5
CDS-3UTR TCA 90 bp GCTGGGTCGGAGGGCTTCCAGAGGCCATGGTCAGCAAGACTCGGGGTAGCAACACAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: AGSEGFQRPWSARLGVATQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...TGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCCCTCCGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR GCA 90 bp GGCTTCCAGAGGCCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GFQRPWSARLGVATKGGRTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCAGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QKALKYRGDLHDEQEQGSEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...TGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QKAERPKDGIYWGPSHHLEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KYRGDLHDEQEQGSSWQDEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...GTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSQKALKYRGDLHDEQEQEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...CTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TCGGAGGGCTTCCAGAGGCCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SEGFQRPWSARLGVATKGGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...GCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCCCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRRPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRETQRRDLLGAQSSPGSPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...ACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKAPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: AERPKDGIYWGPSHHLEVSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...GACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp GGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: GPVITWKSEGVEVSRGSSSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GTGATAGAGTCAGAAACTGACTCTGTGACCTGGCGCACCCACTGCAGGTACGGATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: VIESETDSVTWRTHCRYGSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTGAACAGGGCTCATCATaGCAGGACTCGGCCACTTCG +
Preference number: 4 (lower is better)
Translates to: GGPVITWKSEGVEVSRGSEQGSS*QDSATS
Trigger: CGAAGTGGCCGAGTCCTGCCATGATGAGCCCTGTTC...AGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494751.5
CDS-3UTR TCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGCCACAGGCAGCAGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PWSARLGVATKGGRPQAADRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...TGCTGCCTGTGGCCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR TCA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTTGGGTGGCAGCCACGTaGTTAGAAAACAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLWVAAT*LENSAH
Trigger: GTGCGCGCTGTTTTCTAATCACGTGGCTGCCACCCA...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000464657.5
CDS-3UTR GCA 90 bp GGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCAACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GPVITWKSEGVEVSRGSSTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...TGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKATWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTACCGCATCTGCAGACGTaGGCGGAAATGGCACGCCCG +
Preference number: 4 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVPHLQT*AEMARP
Trigger: CGGGCGTGCCATTTCCGCGCACGTCTGCAGATGCGG...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR GCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATAGAAGAAGGACCACCTaGGCCTCCAGAGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDRRRTT*ASRASQ
Trigger: TTGGCTGGCTCTGGAGGCGCAGGTGGTCCTTCTTCT...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCACCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QKALKYRGDLHDEQEQGSPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...TGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FIGGPVITWKSEGVEVSRPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCACCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVISPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: RPKDGIYWGPSHHLEVRRSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...CCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: FIGGPVITWKSEGVEVSRSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTTCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATGCTCTGCCCTCCCTCTaGTGCACCCCCGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYALPSL*CTPEEC
Trigger: GCATTCTTCGGGGGTGCATCAGAGGGAGGGCAGAGC...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000440279.7
ENST00000487148.5
ENST00000494751.5
CDS-3UTR TCA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGCTCTGCCCTCCCTCTaGTGCACCCCCGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: KTGFIGGPVITWKSEGVEALPSL*CTPEEC
Trigger: GCATTCTTCGGGGGTGCATCAGAGGGAGGGCAGAGC...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000440279.7
ENST00000487148.5
ENST00000494751.5
CDS-3UTR TCA 90 bp GGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCACAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GPVITWKSEGVEVSRGSSQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...TGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: AERPKDGIYWGPSHHLEVQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...GACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR TCA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCACGCCCGTTTCCGTGTaGACCCGAAACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGTPVSV*TRNCHL
Trigger: CAAGTGGCAGTTTCGGGTTCACACGGAAACGGGCGT...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR TCA 90 bp CGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTGGGTGGCAGCCACGTaGTTAGAAAACAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: RTHCRYGKFPCSTGNAITWVAAT*LENSAH
Trigger: GTGCGCGCTGTTTTCTAATCACGTGGCTGCCACCCA...GGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374484.8
ENST00000464657.5
CDS-3UTR GCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVITWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR GCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp TCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCCGCATCTGCAGACGTaGGCGGAAATGGCACGCCCG +
Preference number: 4 (lower is better)
Translates to: SSPGSQKALKYRGDLHDEPHLQT*AEMARP
Trigger: CGGGCGTGCCATTTCCGCGCACGTCTGCAGATGCGG...CTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR GCA 90 bp GGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTAGAAGAAGGACCACCTaGGCCTCCAGAGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GRETQRRDLLGAQSSPGSRRRTT*ASRASQ
Trigger: TTGGCTGGCTCTGGAGGCGCAGGTGGTCCTTCTTCT...ACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKAGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQEPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCCCCTGGCGATCTCCTTaGCGACCTTCTCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRPWRSP*RPSRWG
Trigger: GCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGG...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: KTGFIGGPVITWKSEGVESPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQESPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGATCTCCACCACGGCCCTaGCGATCTCCTTGGCGACCT +
Preference number: 4 (lower is better)
Translates to: GDLHDEQEQGSSWQDCDRSPPRP*RSPWRP
Trigger: AGGTCGCCAAGGAGATCGCCAGGGCCGTGGTGGAGA...TCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp TCTGTGACCTGGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: SVTWRTHCRYGKFPCSTGEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...GCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGAGACGTGCGCGGAAATaGCACGCCCGTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKRRARK*HARFRV
Trigger: CACACGGAAACGGGCGTGCCATTTCCGCGCACGTCT...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp CAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGAGACGTGCGCGGAAATaGCACGCCCGTTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: QKAERPKDGIYWGPSHHLRRARK*HARFRV
Trigger: CACACGGAAACGGGCGTGCCATTTCCGCGCACGTCT...CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp GAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGATCCCGACCCTATCATaGCGCGGTTTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ETQRRDLLGAQSSPGSQKIPTLS*RGLPTS
Trigger: GGAGGTGGGCAAACCGCGCCATGATAGGGTCGGGAT...CTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR TCA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTC +
Preference number: 4 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLLVQES*SQRPHV
Trigger: GACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAG...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000488034.6
ENST00000488478.5
CDS-3UTR TCA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGACTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTC +
Preference number: 4 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGLVQES*SQRPHV
Trigger: GACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAG...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
CDS-3UTR TCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp AGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SQKALKYRGDLHDEQEQGQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...GCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: AQSSPGSQKALKYRGDLHQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...ATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: FIGGPVITWKSEGVEVSRQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGACGCCCGTTTCCGTGTaGACCCGAAACTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: QRRDLLGAQSSPGSQKALTPVSV*TRNCHL
Trigger: CAAGTGGCAGTTTCGGGTTCACACGGAAACGGGCGT...CAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR TCA 90 bp CAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATGGGTGGCAGCCACGTaGTTAGAAAACAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: QKALKYRGDLHDEQEQGSWVAAT*LENSAH
Trigger: GTGCGCGCTGTTTTCTAATCACGTGGCTGCCACCCA...TGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000464657.5
CDS-3UTR TCA 90 bp AGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGTGCATGGGTGGCAGCCACGTaGTTAGAAAACAGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: SSPVPQAMQLPRPLRKGAWVAAT*LENSAH
Trigger: GTGCGCGCTGTTTTCTAATCACGTGGCTGCCACCCA...TGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374484.8
ENST00000464657.5
CDS-3UTR TCA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR GCA 90 bp GGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GRETQRRDLLGAQSSPGSASNKG*RDRARN
Trigger: GTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGC...ACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR GCA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTAACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp TCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGSQKALKYRGDLHDEQTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp TTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LKYRGDLHDEQEQGSSWQTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...CTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp GAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: ETQRRDLLGAQSSPGSQKGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...CTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SQKALKYRGDLHDEQEQGGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...GCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVIGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp TATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: YRGDLHDEQEQGSSWQDCGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...ACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp GCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: AGIFMMSRNRAHHGRTVIGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...TATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp CAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: QRRDLLGAQSSPGSQKALGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...CAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: AGIFMMSRNRAHHGRTVITDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp CAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QKALKYRGDLHDEQEQGSTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QAKGRETQRRDLLGAQSSTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: GGPVITWKSEGVEVSRGSKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...AGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
3UTR CAA 72 bp CAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QAKGRETQRRDL*GAQSSPGSQKA
Trigger: CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR TCA 90 bp AGGACTGTGATAGAGTCAGAAACTGACTCTGTGACCTGGCGCACCCACTGCAGGCTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTC +
Preference number: 4 (lower is better)
Translates to: RTVIESETDSVTWRTHCRLVQES*SQRPHV
Trigger: GACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAG...CCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR TCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRRDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKADRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGGAGCCATGGGAGACTTaGCCAATCGACTACCGCATC +
Preference number: 4 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKEPWET*PIDYRI
Trigger: GATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTC...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR TCA 90 bp CGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RGDLHDEQEQGSSWQDCDEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...ATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR TCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKAEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR GCA 90 bp CAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: QKAERPKDGIYWGPSHHLASNKG*RDRARN
Trigger: GTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGC...CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR GCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVASNKG*RDRARN
Trigger: GTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGC...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR GCA 90 bp AGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: SQKALKYRGDLHDEQEQGASNKG*RDRARN
Trigger: GTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGC...GCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATACCTGGCGCACCCACTaGAGGTACGGAAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDTWRTH*RYGKFP
Trigger: GGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGT...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR GCA 90 bp GCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTATCGACTACCGCATCTaGAGACGTGCGCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: AKGRETQRRDLLGAQSSPIDYRI*RRARKW
Trigger: CCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGAT...AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAAGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQEGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATGGCTTCCAGAGGCCATaGTCAGCAAGACTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: NRQKAERPKDGIYWGPSHGFQRP*SARLGV
Trigger: TACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC...ATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQETDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: KALKYRGDLHDEQEQGSSTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATATCCCGACCCTATCATaGCGCGGTTTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDIPTLS*RGLPTS
Trigger: GGAGGTGGGCAAACCGCGCCATGATAGGGTCGGGAT...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp GCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: AERPKDGIYWGPSHHLEVGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...GACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: PKDGIYWGPSHHLEVRRRGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...ACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCAGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: GPVITWKSEGVEVSRGSSGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...TGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
3UTR CAA 72 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTTCATGATGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGAQSSPGSQKA*KYRGDLHDEQE
Trigger: TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCACTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTC +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSLVQES*SQRPHV
Trigger: GACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAG...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000488034.6
CDS-3UTR TCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: RKVPLFHRQCNYLGHFVRDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...CCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR TCA 90 bp GCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: AQSSPGSQKALKYRGDLHDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...ATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTAGAGCCATGGGAGACTTaGCCAATCGACTACCGCATC +
Preference number: 4 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVEPWET*PIDYRI
Trigger: GATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTC...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR TCA 90 bp GCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: AQSSPGSQKALKYRGDLHEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...ATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: FIGGPVITWKSEGVEVSREVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR TCA 90 bp AAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KGRETQRRDLLGAQSSPGEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...TCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR TCA 90 bp GAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ETQRRDLLGAQSSPGSQKEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...CTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR TCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR TCA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCCACATGGATGTAATCTaGGGGATGAGGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGHMDVI*GMRLTQ
Trigger: CTGCGTCAACCTCATCCCTCAGATTACATCCATGTG...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374484.8
ENST00000464657.5
CDS-3UTR TCA 90 bp CGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATCACATGGATGTAATCTaGGGGATGAGGTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: RGDLHDEQEQGSSWQDCDHMDVI*GMRLTQ
Trigger: CTGCGTCAACCTCATCCCTCAGATTACATCCATGTG...ATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374484.8
ENST00000464657.5
CDS-3UTR GCA 90 bp TTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGCAAGTAACAAAGGCTaGAGAGACCGAGCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: LKYRGDLHDEQEQGSSWQASNKG*RDRARN
Trigger: GTTCCGGGCTCGGTCTCTGCAGCCTTTGTTACTTGC...CTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR GCA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAATCGACTACCGCATCTaGAGACGTGCGCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: KTGFIGGPVITWKSEGVEIDYRI*RRARKW
Trigger: CCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGAT...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR GCA 90 bp AAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGTATCATGGCGCGGTTTaGCCACCTCCTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KRQRDPKTGFIGGPVITWYHGAV*PPPDEG
Trigger: TCCTTCATCAGGAGGTGGGCAAACCGCGCCATGATA...CCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCTCATGCGGCCTACGCTaGTACAGGAGAGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVISCGLR*YRRVDL
Trigger: GAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGA...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCTCATGCGGCCTACGCTaGTACAGGAGAGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: HPLQVRKVPLFHRQCNYLSCGLR*YRRVDL
Trigger: GAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGA...GAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCATCATGCGGCCTACGCTaGTACAGGAGAGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSSCGLR*YRRVDL
Trigger: GAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGA...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp ACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCGAGGCCGGCGAGGGCTaGGTCGGAGGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TERTKSVKAGTKELWVLIEAGEG*VGGLPE
Trigger: CTCTGGAAGCCCTCCGACCCAGCCCTCGCCGGCCTC...GATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GGCTTCCAGAGGCCATGGTCAGCAAGACTCGGGGTAGCAACAAAAGGCGGGAGGAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: GFQRPWSARLGVATKGGRKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...CCTCCCGCCTTTTGTTGCTACCCCGAGTCTTGCTGACCATGGCCTCTGGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CCA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKAEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCAGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: QAKGRETQRRDLLGAQSSGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...TGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: RYGKFPCSTGNAITSATSGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...CGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: AERPKDGIYWGPSHHLEVKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...GACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCCTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTC +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRLVQES*SQRPHV
Trigger: GACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAG...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
CDS-3UTR TCA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTAGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GIFMMSRNRAHHGRTVIEDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...CTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR TCA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: KTGFIGGPVITWKSEGVEDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGGATAGAGTCAGAAACTaGCTCTGTGACCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSDRVRN*LCDLAH
Trigger: GTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATC...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYEVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR GCA 90 bp GGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGTATCATGGCGCGGTTTaGCCACCTCCTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSQKALKYRGDLHDEQEQYHGAV*PPPDEG
Trigger: TCCTTCATCAGGAGGTGGGCAAACCGCGCCATGATA...CTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATTCATGCGGCCTACGCTaGTACAGGAGAGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYSCGLR*YRRVDL
Trigger: GAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGA...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
CDS-3UTR CCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGTCATGCGGCCTACGCTaGTACAGGAGAGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSSCGLR*YRRVDL
Trigger: GAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGA...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
CDS-3UTR CCA 90 bp ATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGTCAACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: IFMMSRNRAHHGRTVIESTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...TGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGIFMMSRNRAHHGRTVIEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...TATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp AGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: RPKDGIYWGPSHHLEVRREQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...CCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp GCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALKYRGDLHDEQEQGSSWEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...CCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp AAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: KGRETQRRDLLGAQSSPGEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...TCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: SQKALKYRGDLHDEQEQGEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...GCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAAGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQEGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: KTGFIGGPVITWKSEGVEGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: GDLHDEQEQGSSWQDCDRGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...TCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: YRGDLHDEQEQGSSWQDCKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...ACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp ACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: TGKRQRDPKTGFIGGPVIKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...GATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR TCA 90 bp CTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGTCAGAGAAGTCAGAAGGCGTTaGAGTATCGCGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LHDEQEQGSSWQDCDRVREVRRR*SIAGIF
Trigger: GAAGATCCCCGCGATACTTCAACGCCTTCTGACTTC...TCTGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAAGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGSQKALKYRGDLHDEQEEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: LKYRGDLHDEQEQGSSWQKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...CTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CCA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTAAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR TCA 90 bp GTGCACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTCAGAAACTGACTCTGTaGCCTGGCGCACCCACTGCA +
Preference number: 4 (lower is better)
Translates to: VHRTNKICQSWDQGTLGFQKLTL*PGAPTA
Trigger: TGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTG...AAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp GGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCAAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: GPVITWKSEGVEVSRGSSKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...TGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000607266.5
CDS-3UTR CCA 90 bp TTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLGAQSSPGSQKALKYRGKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...CCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGGAACAGGGCTCATCATaGCAGGACTGTGATAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSPGSQKALKYRGDLHDEEQGSS*QDCDRV
Trigger: GACTCTATCACAGTCCTGCCATGATGAGCCCTGTTC...CTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp CAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QRDPKTGFIGGPVITWKSKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...TGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CCA 90 bp CAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QRRDLLGAQSSPGSQKALKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...CAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CCA 90 bp TCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPGSQKALKYRGDLHDEQKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...CTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000607266.5
CDS-3UTR CCA 90 bp GTGCACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTGGCCCAGTCATCACCTaGAAGTCAGAAGGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: VHRTNKICQSWDQGTLGFGPVIT*KSEGVE
Trigger: TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCC...AAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000607266.5
CDS-3UTR CCA 90 bp AACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATCAGACTGACTCTGTGACCTaGCGCACCCACTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NKICQSWDQGTLGFNHHQTDSVT*RTHCRY
Trigger: GTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGT...CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp CACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATAAAGACGGGATTTATTaGGGGCCCAGTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: HRTNKICQSWDQGTLGFNKDGIY*GPSHHL
Trigger: CAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTT...ATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CCA 90 bp ACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATAAAATCTGTCAAAGCTaGGACCAAGGAACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: TNKICQSWDQGTLGFNHHKICQS*DQGTLG
Trigger: ACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT...ATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp CGGAACGTAGCCAGAGCCGGAATCCGAGGCCGGCGAGGGCTGGGTCGGAGGGCTTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RNVARAGIRGRRGLGRRALATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...AGCCCTCCGACCCAGCCCTCGCCGGCCTCGGATTCCGGCTCTGGCTACGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CAA 90 bp CCTGGCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATGCAAGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGAPTAGTESSPVPQAMQALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...TTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS TCA 90 bp GCGCGGTTTGCCCACCTCCTGATGAAGGAGGAGCCATGGGAGACTTaGCCAATCGACTACCGCATCTGCAGACGTGCGCGGAAATGGCAC +
Preference number: 5 (lower is better)
Translates to: ARFAHLLMKEEPWET*PIDYRICRRARKWH
Trigger: GTGCCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTCCTCCTTCATCAGGAGGTGGGCAAACCGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS GCA 90 bp GGAGCCATGGGAGACTTGACCAATCGACTACCGCATCTGCAGACGTaGGCGGAAATGGCACGCCCGTTTCCGTGTGAACCCGAAACTGCC +
Preference number: 5 (lower is better)
Translates to: GAMGDLTNRLPHLQT*AEMARPFPCEPETA
Trigger: GGCAGTTTCGGGTTCACACGGAAACGGGCGTGCCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CAA 90 bp CAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QRRDLLGAQSSPGSQKALALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...CAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS GCA 90 bp TTCTGCCCCACCCCCAACTGTCCCTTCATGATCATCCTTTCTCGCTaGACATCGAGGTCCCTACCTGGCGATCTCCTTGGCGACCTTCTC +
Preference number: 5 (lower is better)
Translates to: FCPTPNCPFMIILSR*TSRSLPGDLLGDLL
Trigger: GAGAAGGTCGCCAAGGAGATCGCCAGGTAGGGACCTCGATGTGCAGCGAGAAAGGATGATCATGAAGGGACAGTTGGGGGTGGGGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5
CDS-3UTR CAA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTAGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ACGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TESSPVPQAMQLPRPLRKALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...CTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS GCA 90 bp ATTAGAAAACAGCGCGCACCATGTGACAGTAGAAGAAGGACCACCTaGGCCTCCAGAGCCAGCCAATCCCGACCCTATCATGGCGCGGTT +
Preference number: 5 (lower is better)
Translates to: IRKQRAPCDSRRRTT*ASRASQSRPYHGAV
Trigger: AACCGCGCCATGATAGGGTCGGGATTGGCTGGCTCTGGAGGCGCAGGTGGTCCTTCTTCTACTGTCACATGGTGCGCGCTGTTTTCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CAA 90 bp ACAAAAGGCGGGAGGCCACAGGCAGCAGCGCCGGCATCCAAACAAAAGACAGGAGCTGGTACAGGAGAGTaGATCTCAAAGGCCACACGT +
Preference number: 5 (lower is better)
Translates to: TKGGRPQAAAPASKQKTGAGTGE*ISKATR
Trigger: ACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGC...TCCTGTCTTTTGTTTGGATGCCGGCGCTGCTGCCTGTGGCCTCCCGCCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CAA 90 bp CTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGTCAGAGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LHDEQEQGSSWQDCDRVRALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...TCTGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp TCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SSPGSQKALKYRGDLHDEALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...CTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: GGPVITWKSEGVEVSRGSGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...AGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS GCA 90 bp GCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATaGAATTACCTCGGCCACTTCGTAAGGGTGCACAGAACATCAGCA +
Preference number: 5 (lower is better)
Translates to: AHPLQVRKVPLFHRQ*NYLGHFVRVHRTSA
Trigger: TGCTGATGTTCTGTGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488478.5
CDS-3UTR CAA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: GAQSSPGSQKALKYRGDLQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGACAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGCTGGTACAGGAGAGTaGATCTCAAAGGCCACACGT +
Preference number: 5 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGAGTGE*ISKATR
Trigger: ACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGC...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
CDS-3UTR CAA 90 bp CGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATGCTGGTACAGGAGAGTaGATCTCAAAGGCCACACGT +
Preference number: 5 (lower is better)
Translates to: RGDLHDEQEQGSSWQDCDAGTGE*ISKATR
Trigger: ACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGC...ATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461913.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CAA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGGAGCCATGGGAGACTaGACCAATCGACTACCGCAT +
Preference number: 5 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVGAMGD*TNRLPH
Trigger: ATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTCC...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CAA 90 bp AGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGGGAGCCATGGGAGACTaGACCAATCGACTACCGCAT +
Preference number: 5 (lower is better)
Translates to: RPKDGIYWGPSHHLEVRRGAMGD*TNRLPH
Trigger: ATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTCC...CCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS-3UTR CAA 90 bp GGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: GRETQRRDLLGAQSSPGSGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...ACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CAA 90 bp TTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: LLGAQSSPGSQKALKYRGQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...CCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp AGGACTGTGATAGAGTCAGAAACTGACTCTGTGACCTGGCGCACCCACTGCAGGCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: RTVIESETDSVTWRTHCRQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...CCTGCAGTGGGTGCGCCAGGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp GCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: AERPKDGIYWGPSHHLEVQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...GACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS GCA 90 bp GCGCACCCACTGCAGGTACGGAAAGTTCCCCTGTTCCACAGGCAATaGAATTACCTCGGCCACTTCGTAAGGGTGCACAGAACTACAAAA +
Preference number: 5 (lower is better)
Translates to: AHPLQVRKVPLFHRQ*NYLGHFVRVHRTTK
Trigger: TTTTGTAGTTCTGTGCACCCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486590.1
ENST00000487637.1
CDS-3UTR CAA 90 bp CCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: PKTGFIGGPVITWKSEGVLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...AACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCATTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: QAKGRETQRRDLLGAQSSLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...TGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CAA 90 bp AGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RRDLLGAQSSPGSQKALKLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...CTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: ALKYRGDLHDEQEQGSSWGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...CCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CAA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: FIGGPVITWKSEGVEVSRGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: RKVPLFHRQCNYLGHFVRGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...CCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp AGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: SQKALKYRGDLHDEQEQGGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...GCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: QRRDLLGAQSSPGSQKALGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...CAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: QAKGRETQRRDLLGAQSSQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...TGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS TCA 90 bp TCAGCACCTCACTGTCTTCCTCGATCTTCCCTTTCCACTCATAGCTaGAAGGTCAGAGGGGGAGAGTTGTGGGGAGCAAAGAATTTCCCC +
Preference number: 5 (lower is better)
Translates to: SAPHCLPRSSLSTHS*KVRGGELWGAKNFP
Trigger: GGGGAAATTCTTTGCTCCCCACAACTCTCCCCCTCTGACCTTTCAGCTATGAGTGGAAAGGGAAGATCGAGGAAGACAGTGAGGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479249.5
ENST00000480677.5
ENST00000486590.1
ENST00000487637.1
CDS-3UTR CAA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAATTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: PGSQKALKYRGDLHDEQELATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...TTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RDLLGAQSSPGSQKALKYLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...ATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: TGFIGGPVITWKSEGVEVLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...TACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp AAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAATTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: KTGFIGGPVITWKSEGVELATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...TTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: GFIGGPVITWKSEGVEVSGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...CGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp GATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: DLLGAQSSPGSQKALKYRQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...GCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp TTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: LKYRGDLHDEQEQGSSWQQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...CTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000488478.5
CDS-3UTR CAA 90 bp GGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: GSQKALKYRGDLHDEQEQQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...CTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp TCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGGCTGGTACAGGAGAGTaGATCTCAAAGGCCACACGT +
Preference number: 5 (lower is better)
Translates to: SSPGSQKALKYRGDLHDEAGTGE*ISKATR
Trigger: ACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGC...CTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000440930.6
ENST00000461913.5
ENST00000482684.5
ENST00000488034.6
ENST00000488478.5
CDS-3UTR CAA 90 bp CAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: QSSPGSQKALKYRGDLHDLATFS*GQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAA...ATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000488478.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCGCCCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TERTKSVKAGTKELWVLIALAIS*ATFSLG
Trigger: CCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGGC...GATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp ATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: IGGPVITWKSEGVEVSRGWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...TCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp TTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: LGAQSSPGSQKALKYRGDWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...ATCCCCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CTTCATGATGAGCAGGAACAGGGCTCATCATGGCAGGACTGTGATAGAGTCAGAGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: LHDEQEQGSSWQDCDRVRGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...TCTGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp GGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: GKRQRDPKTGFIGGPVITWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...GGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CAA 90 bp GACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: DPKTGFIGGPVITWKSEGWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...GCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp ACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: TQRRDLLGAQSSPGSQKAWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...CGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp CGGAAAGTTCCCCTGTTCCACAGGCAATGCAATTACCTCGGCCACTTCGTAAGGTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: RKVPLFHRQCNYLGHFVRWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...CCTTACGAAGTGGCCGAGGTAATTGCATTGCCTGTGGAACAGGGGAACTTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp TTTATTGGGGGCCCAGTCATCACCTGGAAGTCAGAAGGCGTTGAAGTATCGCGGTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: FIGGPVITWKSEGVEVSRWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...CCGCGATACTTCAACGCCTTCTGACTTCCAGGTGATGACTGGGCCCCCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000494751.5
ENST00000607266.5
CDS-3UTR CAA 90 bp AACAGGCAAAAGGCAGAGAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: NRQKAERPKDGIYWGPSHWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...ATGACTGGGCCCCCAATAAATCCCGTCTTTGGGTCTCTCTGCCTTTTGCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000440930.6
ENST00000461913.5
ENST00000487148.5
ENST00000488034.6
CDS-3UTR CAA 90 bp GGAAGTCAGAAGGCGTTGAAGTATCGCGGGGATCTTCATGATGAGCAGGAACAGTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: GSQKALKYRGDLHDEQEQWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...CTGTTCCTGCTCATCATGAAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374484.8
ENST00000374500.10
ENST00000435267.6
ENST00000440279.7
ENST00000440930.6
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
ENST00000487148.5
ENST00000488034.6
ENST00000607266.5
CDS-3UTR CAA 90 bp AAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATCAGCACGCTGGTACAGGAGAGTaGATCTCAAAGGCCACACGT +
Preference number: 5 (lower is better)
Translates to: KICQSWDQGTLGFNHHQHAGTGE*ISKATR
Trigger: ACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGC...GTGCTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461913.5
ENST00000482684.5
CDS-3UTR CAA 90 bp GGGTGCACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: GCTERTKSVKAGTKELWVWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...AACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGTGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp AAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATCAGCACGGAAGTCAGAAGGCGTaGAAGTATCGCGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: KICQSWDQGTLGFNHHQHGSQKA*KYRGDL
Trigger: AAGATCCCCGCGATACTTCAACGCCTTCTGACTTCC...GTGCTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp AACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTAATCATCATCAGCAAAGACGGGATTTATaGGGGGCCCAGTCATCACCT +
Preference number: 5 (lower is better)
Translates to: NKICQSWDQGTLGFNHHQQRRDL*GAQSSP
Trigger: AGGTGATGACTGGGCCCCCAATAAATCCCGTCTTTG...CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS-3UTR CAA 90 bp GTGCACAGAACGAACAAAATCTGTCAAAGCTGGGACCAAGGAACTTTGGGTTTTTGGGACCAAGGAACTTaGGGTTTTAATCATCATCAG +
Preference number: 5 (lower is better)
Translates to: VHRTNKICQSWDQGTLGFWDQGT*GFNHHQ
Trigger: CTGATGATGATTAAAACCCAAAGTTCCTTGGTCCCA...AAAACCCAAAGTTCCTTGGTCCCAGCTTTGACAGATTTTGTTCGTTCTGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374484.8
ENST00000461913.5
ENST00000464657.5
ENST00000482684.5
CDS CAA 72 bp GGTCCCTACCTGGCGATCTCCTTGGCGACCTTCTCGTaGGGGCAAGTAACAAAGGCTGCAGAGACCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GPYLAISLATFS*GQVTKAAETEP
Trigger: GGGCTCGGTCTCTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGTAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5
CDS CAA 90 bp GGCGCGGTTTGCCCACCTCCTGATGAAGGAGGAGCCATGGGAGACTaGACCAATCGACTACCGCATCTGCAGACGTGCGCGGAAATGGCA +
Preference number: 6 (lower is better)
Translates to: GAVCPPPDEGGAMGD*TNRLPHLQTCAEMA
Trigger: TGCCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGATTGGTCAAGTCTCCCATGGCTCCTCCTTCATCAGGAGGTGGGCAAACCGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS GCA 72 bp GGAGACTTGACCAATCGACTACCGCATCTGCAGACGTaGGCGGAAATGGCACGCCCGTTTCCGTGTGAACCC +
Preference number: 6 (lower is better)
Translates to: GDLTNRLPHLQT*AEMARPFPCEP
Trigger: GGGTTCACACGGAAACGGGCGTGCCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGATTGGTCAAGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS GCA 72 bp CAGCGCGCACCATGTGACAGTAGAAGAAGGACCACCTaGGCCTCCAGAGCCAGCCAATCCCGACCCTATCAT +
Preference number: 6 (lower is better)
Translates to: QRAPCDSRRRTT*ASRASQSRPYH
Trigger: ATGATAGGGTCGGGATTGGCTGGCTCTGGAGGCGCAGGTGGTCCTTCTTCTACTGTCACATGGTGCGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374500.10
ENST00000435267.6
ENST00000485890.1
ENST00000492510.1
CDS CCA 72 bp CCAATCGACTACCGCATCTGCAGACGTGCGCGGAAATaGCACGCCCGTTTCCGTGTGAACCCGAAACTGCCA +
Preference number: 6 (lower is better)
Translates to: PIDYRICRRARK*HARFRVNPKLP
Trigger: TGGCAGTTTCGGGTTCACACGGAAACGGGCGTGCCATTTCCGCGCACGTCTGCAGATGCGGTAGTCGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374500.10
ENST00000435267.6
CDS TCA 72 bp CCCCACTCATGCGGCCTACGCTGGGTGGCAGCCACGTaGTTAGAAAACAGCGCGCACCATGTGACAGTAGAA +
Preference number: 6 (lower is better)
Translates to: PHSCGLRWVAAT*LENSAHHVTVE
Trigger: TTCTACTGTCACATGGTGCGCGCTGTTTTCTAATCACGTGGCTGCCACCCAGCGTAGGCCGCATGAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485890.1
ENST00000492510.1
CDS CCA 72 bp GATCATCCTTTCTCGCTGCACATCGAGGTCCCTACCTaGCGATCTCCTTGGCGACCTTCTCGTTGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: DHPFSLHIEVPT*RSPWRPSRWGK
Trigger: CTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGTAGGGACCTCGATGTGCAGCGAGAAAGGATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5
CDS CAA 72 bp CTCGCTGCACATCGAGGTCCCTACCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGGCAAGTAACAAAGGCT +
Preference number: 6 (lower is better)
Translates to: LAAHRGPYLAIS*ATFSLGQVTKA
Trigger: AGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGTAGGGACCTCGATGTGCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5
CDS CAA 90 bp TCATCCTTTCTCGCTGCACATCGAGGTCCCTACCTGGCGATCTCCTaGGCGACCTTCTCGTTGGGGCAAGTAACAAAGGCTGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: SSFLAAHRGPYLAIS*ATFSLGQVTKAAET
Trigger: GGTCTCTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCCAGGTAGGGACCTCGATGTGCAGCGAGAAAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5
CDS TCA 72 bp CCCCCACTCATGCGGCCTACGCTGGTACAGGAGAGTTaGTCTCAAAGGCCACACGTCACACGGAGAAACAAC +
Preference number: 6 (lower is better)
Translates to: PPLMRPTLVQES*SQRPHVTRRNN
Trigger: GTTGTTTCTCCGTGTGACGTGTGGCCTTTGAGATCAACTCTCCTGTACCAGCGTAGGCCGCATGAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000374496.3
ENST00000440930.6
ENST00000461913.5
ENST00000468782.1
ENST00000482684.5
ENST00000486590.1
ENST00000487637.1
ENST00000488034.6
ENST00000488478.5
CDS GCA 72 bp ACCCCCAACTGTCCCTTCATGATCATCCTTTCTCGCTaGACATCGAGGTCCCTACCTGGCGATCTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: TPNCPFMIILSR*TSRSLPGDLLG
Trigger: GCCAAGGAGATCGCCAGGTAGGGACCTCGATGTGCAGCGAGAAAGGATGATCATGAAGGGACAGTTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465956.1
ENST00000480120.5