RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000036257

Ensembl transcript IDs: ENST00000264414.9, ENST00000344951.8, ENST00000409096.5, ENST00000409777.5, ENST00000432260.2, ENST00000451538.1, ENST00000454323.1, ENST00000481135.1, ENST00000484081.1, ENST00000487558.1, ENST00000497715.1, ENST00000541548.5, ENST00000546102.1, ENST00000617432.4

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTACCCAACATATCCGGTGAACAAAACATCAACAGTGCTTCACTATaGGAAGGATTCTTACAGAGAAGGCCTATCATCAGCATCTTGGGG +
Preference number: 1 (lower is better)
Translates to: LPNISGEQNINSASL*EGFLQRRPIISILG
Trigger: CCCCAAGATGCTGATGATAGGCCTTCTCTGTAAGAATCCTTCTCATAGTGAAGCACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CCA 90 bp AATGCACGGGTTTCAAGACATCCTAGTTGTTTTTCTCCTGAGAGCTaGCGTAATGGCCAATCTCTGTATCATTACCTGTTAAATTTATCT +
Preference number: 1 (lower is better)
Translates to: NARVSRHPSCFSPES*RNGQSLYHYLLNLS
Trigger: AGATAAATTTAACAGGTAATGATACAGAGATTGGCCATTACGCCAGCTCTCAGGAGAAAAACAACTAGGATGTCTTGAAACCCGTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR TCA 90 bp AAGCACAGGATATCTGACAAGAATCTTCAGCACAAAGCACATGTTTaGAAACGTGAAACGATGACTCTTTGGAGGACAATAGCTAAATAT +
Preference number: 1 (lower is better)
Translates to: KHRISDKNLQHKAHV*KRETMTLWRTIAKY
Trigger: ATATTTAGCTATTGTCCTCCAAAGAGTCATCGTTTCACGTTTTCAAACATGTGCTTTGTGCTGAAGATTCTTGTCAGATATCCTGTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR TCA 90 bp AAGTTCACTGACATAAAGAATCCTTGCAATCACAACCACTTTTTGTaGGGCTGTGCGTTCCCTAATTGCAATGAATTTTCAGTCTTTAAA +
Preference number: 1 (lower is better)
Translates to: KFTDIKNPCNHNHFL*GCAFPNCNEFSVFK
Trigger: TTTAAAGACTGAAAATTCATTGCAATTAGGGAACGCACAGCCTCACAAAAAGTGGTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 2 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
3UTR-3UTR CCA 90 bp CTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATAGAGTTTCTCGCACCTTTACAGTaGAGAAATCTGGCGGACACC +
Preference number: 2 (lower is better)
Translates to: LCLRLLLSALLQSYPIEFLAPLQ*RNLADT
Trigger: GGTGTCCGCCAGATTTCTCCACTGTAAAGGTGCGAG...AAACTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
3UTR CAA 90 bp AAACCTAGGTCCAACTCCTGGCTCTGCCATTTCCTGCTAGCAACCTaGGACAACACTGGTATAATGACAGTTATGTCACATAAAGCCAAT +
Preference number: 2 (lower is better)
Translates to: KPRSNSWLCHFLLAT*DNTGIMTVMSHKAN
Trigger: ATTGGCTTTATGTGACATAACTGTCATTATACCAGTGTTGTCCAAGGTTGCTAGCAGGAAATGGCAGAGCCAGGAGTTGGACCTAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGACTAACTCGACAATCTaGGCTGTCCTGTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLTNSTI*AVLFSQ
Trigger: CTGGGAAAACAGGACAGCTCAGATTGTCGAGTTAGT...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp CTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATAGAGTTTGCCGTACCTGATGTGATGCACTaGGGACACAACATCACTTAT +
Preference number: 2 (lower is better)
Translates to: LRLLLSALLQSYPIEFAVPDVMH*GHNITY
Trigger: ATAAGTGATGTTGTGTCCTCAGTGCATCACATCAGG...TACGGCAAACTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
3UTR-3UTR GCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGATCAGGATGTGTACTTaGGCCCAAAACAAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLIRMCT*AQNKGS
Trigger: GGAACCTTTGTTTTGGGCTCAAGTACACATCCTGAT...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTCACAAAGCACATGTTTaGAAACGTGAAACGATGACT +
Preference number: 2 (lower is better)
Translates to: GSRPFLLPNISGEQNINSHKAHV*KRETMT
Trigger: AGTCATCGTTTCACGTTTTCAAACATGTGCTTTGTG...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: FTFSRGTVKMISTGINVVELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: TVKMISTGINVVKPEAQSELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR GCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTCACCAAAATTTCTCTaGACCAACAGGATGGAATGG +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLSPKFL*TNRMEW
Trigger: CCATTCCATCCTGTTGGTGCAGAGAAATTTTGGTGA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CAA 90 bp GAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTaGAGCCCAAAACAAAGGTTCCTGGTCATAAGGCTAGAAGATGAG +
Preference number: 2 (lower is better)
Translates to: EISNYNREKPNQDVY*SPKQRFLVIRLEDE
Trigger: CTCATCTTCTAGCCTTATGACCAGGAACCTTTGTTTTGGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CAA 90 bp AGAAGGATTCTTACAGAGAAGGCCTATCATCAGCATCTTGGGGGTTaGATAGTACATAATTACAATGCTACACAGGTGACTCTAGCATAC +
Preference number: 2 (lower is better)
Translates to: RRILTEKAYHQHLGG*IVHNYNATQVTLAY
Trigger: GTATGCTAGAGTCACCTGTGTAGCATTGTAATTATGTACTATCAAACCCCCAAGATGCTGATGATAGGCCTTCTCTGTAAGAATCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR TCA 90 bp TCCACATTATTTTGTTGTACATACACACGGTCCATGTACATTAGTATGTCTCTAAAGTGCCTCCTGATGTaGTGCACTGAGGACACAACA +
Preference number: 2 (lower is better)
Translates to: STLFCCTYTRSMYISMSLKCLLM*CTEDTT
Trigger: TGTTGTGTCCTCAGTGCATCACATCAGGAGGCACTT...TAGAGACATACTAATGTACATGGACCGTGTGTATGTACAACAAAATAATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432260.2
3UTR-3UTR GCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGCAGCTGCCAACTTTGTaGTCTGACATACTTGAATTA +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLQLPTL*SDILEL
Trigger: TAATTCAAGTATGTCAGAGCACAAAGTTGGCAGCTG...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: VKMISTGINVVKPEAQSTKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 2 (lower is better)
Translates to: MISTGINVVKPEAQSTDVKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACATTTACATCAACACTaGAGACCTGGGGAAATGAAA +
Preference number: 2 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGHLHQH*RPGEMK
Trigger: TTTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATGAAGCACAGGATATCTaGCAAGAATCTTCAGCACAA +
Preference number: 2 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYEAQDI*QESSAQ
Trigger: TTGTGCTGAAGATTCTTGTCAGATATCCTGTGCTTC...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGCATGATTTTTGCAGTTaGAAAACTATGTATCCACCC +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLHDFCS*KTMYPP
Trigger: GGGTGGATACATAGTTTTTCAACTGCAAAAATCATG...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAACATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 2 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454323.1
3UTR-3UTR TCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACACATGTTTGAAAACGTaGAACGATGACTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNTCLKT*NDDSLE
Trigger: CTCCAAAGAGTCATCGTTTCACGTTTTCAAACATGT...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR TCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCACAAAGCACATGTTTaGAAACGTGAAACGATGACT +
Preference number: 2 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYHKAHV*KRETMT
Trigger: AGTCATCGTTTCACGTTTTCAAACATGTGCTTTGTG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR CCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGGAAACGATGACTCTTTaGAGGACAATAGCTAAATAT +
Preference number: 2 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLETMTL*RTIAKY
Trigger: ATATTTAGCTATTGTCCTCCAAAGAGTCATCGTTTC...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CAA 90 bp AAGAAATGTCTTCAGAGCAAGATAACTGGGAAATCTGCATTTCTTTaGCCATTTTTGTTACCCAACTTACACAATGCGCAAAGTGCTAAG +
Preference number: 2 (lower is better)
Translates to: KKCLQSKITGKSAFL*PFLLPNLHNAQSAK
Trigger: CTTAGCACTTTGCGCATTGTGTAAGTTGGGTAACAAAAATGGCAAAAGAAATGCAGATTTCCCAGTTATCTTGCTCTGAAGACATTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR GCA 90 bp ACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCAACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 2 (lower is better)
Translates to: TYVYTLRSSGVRAKYSLSTRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...TGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
3UTR-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 2 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454323.1
3UTR-3UTR GCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTGTGCGTTCCCTAATTaGAATGAATTTTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNCAFPN*NEFSVF
Trigger: AAAGACTGAAAATTCATTGCAATTAGGGAACGCACA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR GCA 72 bp ATGGATAGGATTAAACCTAGGTCCAACTCCTGGCTCTaGCATTTCCTGCTAGCAACCTTGGACAACACTGGT +
Preference number: 3 (lower is better)
Translates to: MDRIKPRSNSWL*HFLLATLDNTG
Trigger: ACCAGTGTTGTCCAAGGTTGCTAGCAGGAAATGGCAGAGCCAGGAGTTGGACCTAGGTTTAATCCTATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CCA 72 bp TGGAATATGGATAGGATTAAACCTAGGTCCAACTCCTaGCTCTGCCATTTCCTGCTAGCAACCTTGGACAAC +
Preference number: 3 (lower is better)
Translates to: WNMDRIKPRSNS*LCHFLLATLDN
Trigger: GTTGTCCAAGGTTGCTAGCAGGAAATGGCAGAGCCAGGAGTTGGACCTAGGTTTAATCCTATCCATATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR CAA 90 bp ATTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATCATCACCATAGCTGTTaGATGATCATTCCAAGCTTG +
Preference number: 3 (lower is better)
Translates to: IAPLSTTSPFRSLAIISNHHHSC*MIIPSL
Trigger: CAAGCTTGGAATGATCATCAAACAGCTATGGTGATG...ATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
3UTR-3UTR CAA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGCTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 3 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLLNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR TCA 72 bp ATATCCGGTGAACAAAACATCAACAGTGCTTCACTATaGGAAGGATTCTTACAGAGAAGGCCTATCATCAGC +
Preference number: 3 (lower is better)
Translates to: ISGEQNINSASL*EGFLQRRPIIS
Trigger: GCTGATGATAGGCCTTCTCTGTAAGAATCCTTCTCATAGTGAAGCACTGTTGATGTTTTGTTCACCGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR CAA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCTACAGCATGCTCAAATaGTATGCTTGGGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPYSMLK*YAWVFV
Trigger: TACAAAGACCCAAGCATACAATTTGAGCATGCTGTA...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 3 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYLNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 3 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
3UTR-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATTACAGCATGCTCAAATaGTATGCTTGGGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYYSMLK*YAWVFV
Trigger: TACAAAGACCCAAGCATACAATTTGAGCATGCTGTA...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR TCA 72 bp GACATAAAGAATCCTTGCAATCACAACCACTTTTTGTaGGGCTGTGCGTTCCCTAATTGCAATGAATTTTCA +
Preference number: 3 (lower is better)
Translates to: DIKNPCNHNHFL*GCAFPNCNEFS
Trigger: TGAAAATTCATTGCAATTAGGGAACGCACAGCCTCACAAAAAGTGGTTGTGATTGCAAGGATTCTTTATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR GCA 72 bp TACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTaGCAAATATTCTCTCTCAATAAGTCCTTCAATACG +
Preference number: 3 (lower is better)
Translates to: YICVYFAILRCS*QIFSLNKSFNT
Trigger: CGTATTGAAGGACTTATTGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACGGCGGCTCGGACTCTaGCGACTCCGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVRRLGL*RLRCGW
Trigger: CCAGCCGCATCGGAGTCGCCAGAGTCCGAGCCGCCG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTTCAGATTCGACATGGTaGTCGTCCCCTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSSDSTW*SSPPRR
Trigger: CCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGA...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCGGCGGCTCGGACTCTaGCGACTCCGATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNRRLGL*RLRCGW
Trigger: CCAGCCGCATCGGAGTCGCCAGAGTCCGAGCCGCCG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTGCTCAGATTCGACATaGTGCTCGTCCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLCSDST*CSSPPR
Trigger: CCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTCAGATTCGACATGGTaGTCGTCCCCTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTSDSTW*SSPPRR
Trigger: CCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPALWCG*LSGPIS
Trigger: GGATATTGGCCCACTCAGTCAGCCACACCAAAGTGC...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATAAGTGCCTCCTGATGTaGTGCACTGAGGACACAACA +
Preference number: 4 (lower is better)
Translates to: IAPLSTTSPFRSLAIISNKCLLM*CTEDTT
Trigger: TGTTGTGTCCTCAGTGCATCACATCAGGAGGCACTT...ATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGGACAAACATCTCACTaGGCAGGCCGAACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSGQTSH*AGRTSS
Trigger: GGACGACGTTCGGCCTGCGCAGTGAGATGTTTGTCC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTGCTCAGATTCGACATaGTGCTCGTCCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVCSDST*CSSPPR
Trigger: CCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIPGSAS*CPSGCP
Trigger: CGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGGACAAACATCTCACTaGGCAGGCCGAACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKGQTSH*AGRTSS
Trigger: GGACGACGTTCGGCCTGCGCAGTGAGATGTTTGTCC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGGCTGCCCGTGCCTTTaGTCAGATTCGACATGGTGC +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKGCPCL*SDSTWC
Trigger: GCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACA +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYPSGCP*LCSDST
Trigger: TGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTWCPSG*PCLCSD
Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNWCPSG*PCLCSD
Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GCATTTCTTATTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCGCAAGCATTTCTTATTaGGCCTCTGTCTACGACTTC +
Preference number: 4 (lower is better)
Translates to: AFLIAPLSTTSPFRSLAIASISY*ASVYDF
Trigger: GAAGTCGTAGACAGAGGCGCAATAAGAAATGCTTGC...GATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAATAAGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR GCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTCCAACTCCTGGCTCTaGCATTTCCTGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLSNSWL*HFLLAT
Trigger: GGTTGCTAGCAGGAAATGGCAGAGCCAGGAGTTGGA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTAGAGACGGTCATTGTTaGATGATTCCAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSRDGHC*MIPGGS
Trigger: GCTTCCTCCTGGAATCATTCAACAATGACCGTCTCT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTTTTGGTGTGGCTGACTaGGTGGGCCAATATCCTGTC +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSFGVAD*VGQYPV
Trigger: GACAGGATATTGGCCCACTCAGTCAGCCACACCAAA...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSALWCG*LSGPIS
Trigger: GGATATTGGCCCACTCAGTCAGCCACACCAAAGTGC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVALWCG*LSGPIS
Trigger: GGATATTGGCCCACTCAGTCAGCCACACCAAAGTGC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTALWCG*LSGPIS
Trigger: GGATATTGGCCCACTCAGTCAGCCACACCAAAGTGC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TATGCTACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: YATYVYTLRSSGVRAKYSRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...AGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTACTAACTCGACAATCTaGGCTGTCCTGTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSTNSTI*AVLFSQ
Trigger: CTGGGAAAACAGGACAGCTCAGATTGTCGAGTTAGT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTGTTCTAGGCCTTTTCTaGTACCCAACATATCCGGTG +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSVLGLF*YPTYPV
Trigger: CACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAAC...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAAGAACCCGCTGTGTTaGTTTACCACAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSKNPLC*FTTGEG
Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTTCTT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
3UTR CAA 72 bp TTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAGTTTGCCGTAGATGAT +
Preference number: 4 (lower is better)
Translates to: LRLCLRLLLSAL*QSYPIEFAVDD
Trigger: ATCATCTACGGCAAACTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCAGAGACGGTCATTGTTaGATGATTCCAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPRDGHC*MIPGGS
Trigger: GCTTCCTCCTGGAATCATTCAACAATGACCGTCTCT...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTCATTCCTTCCAGTTTTaGCGTGAACTGACATCCACA +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSHSFQF*RELTST
Trigger: TGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATG...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATTTGGTGTGGCTGACTaGGTGGGCCAATATCCTGTC +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKFGVAD*VGQYPV
Trigger: GACAGGATATTGGCCCACTCAGTCAGCCACACCAAA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTTTGGTGTGGCTGACTaGGTGGGCCAATATCCTGTC +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCFGVAD*VGQYPV
Trigger: GACAGGATATTGGCCCACTCAGTCAGCCACACCAAA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATATGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGYDAGV*AVDHCV
Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCATA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATCTGCAGAACCCATATaGTGCTGGAGTGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGSAEPI*CWSVSC
Trigger: ACAGCTCACACTCCAGCATCATATGGGTTCTGCAGA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCACTAACTCGACAATCTaGGCTGTCCTGTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPTNSTI*AVLFSQ
Trigger: CTGGGAAAACAGGACAGCTCAGATTGTCGAGTTAGT...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIPSGCP*LCSDST
Trigger: TGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYVLVGC*TLVWLT
Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNVLVGC*TLVWLT
Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVVLVGC*TLVWLT
Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSKSMSW*WWDVAL
Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTCCAACTCCTGGCTCTaGCATTTCCTGCTAGCAACC +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCSNSWL*HFLLAT
Trigger: GGTTGCTAGCAGGAAATGGCAGAGCCAGGAGTTGGA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATGTTGCACTTTGGTGTaGCTGACTGAGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGCCTLV*LTEWAN
Trigger: ATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAGAACCCGCTGTGTTaGTTTACCACAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCKNPLC*FTTGEG
Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTTCTT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCCTAGGTCCAACTCCTaGCTCTGCCATTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTPRSNS*LCHFLL
Trigger: TAGCAGGAAATGGCAGAGCCAGGAGTTGGACCTAGG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTACGGTCATTGTTGAATaGTTCCAGGAGGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSTVIVE*FQEEAI
Trigger: GATCGCTTCCTCCTGGAATCATTCAACAATGACCGT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCCCTGTAGATGTTGCCTaGATTCATCCATCGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPPVDVA*IHPSLC
Trigger: ACACAACGATGGATGAATTCAGGCAACATCTACAGG...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATATGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKYDAGV*AVDHCV
Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCATA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTATGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVYDAGV*AVDHCV
Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCATA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTATGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCYDAGV*AVDHCV
Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCATA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATCTGCAGAACCCATATaGTGCTGGAGTGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKSAEPI*CWSVSC
Trigger: ACAGCTCACACTCCAGCATCATATGGGTTCTGCAGA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTCTGCAGAACCCATATaGTGCTGGAGTGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCSAEPI*CWSVSC
Trigger: ACAGCTCACACTCCAGCATCATATGGGTTCTGCAGA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCGCGCCTTCAACTGCTaGGTTACCTCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNRAFNC*VTSATR
Trigger: TCTAGTAGCGGAGGTAACTCAGCAGTTGAAGGCGCG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp CTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATAGAGTTTCCTGATGTGATGCACTaGGGACACAACATCACTTAT +
Preference number: 4 (lower is better)
Translates to: LCLRLLLSALLQSYPIEFPDVMH*GHNITY
Trigger: ATAAGTGATGTTGTGTCCTCAGTGCATCACATCAGG...AAACTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCGCGCCTTCAACTGCTaGGTTACCTCAAATGTGTAT +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSRAFNC*VTSNVY
Trigger: ATACACATTTGAGGTAACTCAGCAGTTGAAGGCGCG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451538.1
CDS-3UTR GCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTGTTGCCTGTAGATGTTaGCTGAATTCATCCATCGTT +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSVACRC*LNSSIV
Trigger: AACGATGGATGAATTCAGGCAACATCTACAGGCAAC...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCAGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TYVYTLRSSGVRAKYSLSELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...TGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATTGTTGCACTTTGGTGTaGCTGACTGAGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYCCTLV*LTEWAN
Trigger: ATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACA...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATGTTGCACTTTGGTGTaGCTGACTGAGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVCCTLV*LTEWAN
Trigger: ATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATGTTGCACTTTGGTGTaGCTGACTGAGTGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKCCTLV*LTEWAN
Trigger: ATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNSMSWC*WDVALW
Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTSMSWC*WDVALW
Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKSMSWC*WDVALW
Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp CGTTCTCCACATTATTTTGTTGTACATACACACGGTCCATGTACATTAGTATGTCTCGCACCTTTACAGTaGAGAAATCTGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: RSPHYFVVHTHGPCTLVCLAPLQ*RNLADT
Trigger: GGTGTCCGCCAGATTTCTCCACTGTAAAGGTGCGAG...ACATACTAATGTACATGGACCGTGTGTATGTACAACAAAATAATGTGGAGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTACGGTCATTGTTGAATaGTTCCAGGAGGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTTVIVE*FQEEAI
Trigger: GATCGCTTCCTCCTGGAATCATTCAACAATGACCGT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAACGGTCATTGTTGAATaGTTCCAGGAGGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVTVIVE*FQEEAI
Trigger: GATCGCTTCCTCCTGGAATCATTCAACAATGACCGT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACGGTCATTGTTGAATaGTTCCAGGAGGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSTVIVE*FQEEAI
Trigger: GATCGCTTCCTCCTGGAATCATTCAACAATGACCGT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTAGAGACGGTCATTGTTaGATGATTCCAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVRDGHC*MIPGGS
Trigger: GCTTCCTCCTGGAATCATTCAACAATGACCGTCTCT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPVLLAL*LPFSAY
Trigger: ATAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSSFDVN*HPHSVF
Trigger: AAAGACTGAATGTGGATGTCAGTTCACGTCAAAACT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCTTCCAGTTTTGACGTaGACTGACATCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLPVLT*TDIHIQ
Trigger: CTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACATTCCTTCCAGTTTTaGCGTGAACTGACATCCACA +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGHSFQF*RELTST
Trigger: TGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCCATAAGGCTAGAAGATaGGTAAGTGCAAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPHKARR*VSASGR
Trigger: TCTACCACTTGCACTTACTCATCTTCTAGCCTTATG...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCACAACCACTTTTTGTaGGGCTGTGCGTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCHNHFL*GCAFPN
Trigger: ATTAGGGAACGCACAGCCTCACAAAAAGTGGTTGTG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTCCTTCTGGCTAATTTaGCATAGGAAAGGCACACAA +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLSFWLI*HRKGTQ
Trigger: TTGTGTGCCTTTCCTATGTCAAATTAGCCAGAAGGA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGCAAGCATTTCTTATTaGGCCTCTGTCTACGACTTC +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSASISY*ASVYDF
Trigger: GAAGTCGTAGACAGAGGCGCAATAAGAAATGCTTGC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIVLVGC*TLVWLT
Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNVLVGC*TLVWLT
Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLSSSTF*LVSFLS
Trigger: AGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGCATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVELPSP*EEYSPR
Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGTTCTAGGCCTTTTCTaGTACCCAACATATCCGGTG +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSVLGLF*YPTYPV
Trigger: CACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAAC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAACTCAAAAGCATGTCTTaGTGCTGGTGGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKLKSMS*CWWDVA
Trigger: TGCAACATCCCACCAGCACCAAGACATGCTTTTGAG...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCTCAAAAGCATGTCTTaGTGCTGGTGGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLKSMS*CWWDVA
Trigger: TGCAACATCCCACCAGCACCAAGACATGCTTTTGAG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCTCAAAAGCATGTCTTaGTGCTGGTGGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTLKSMS*CWWDVA
Trigger: TGCAACATCCCACCAGCACCAAGACATGCTTTTGAG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAAGAACCCGCTGTGTTaGTTTACCACAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIKNPLC*FTTGEG
Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTTCTT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAAGAACCCGCTGTGTTaGTTTACCACAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNKNPLC*FTTGEG
Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTTCTT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGTGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLCFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACCTAGGTCCAACTCCTaGCTCTGCCATTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIPRSNS*LCHFLL
Trigger: TAGCAGGAAATGGCAGAGCCAGGAGTTGGACCTAGG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTGTACATGCCTATCTGTaGTACCCACTTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSVHAYL*YPLKYV
Trigger: TACATACTTAAGTGGGTACCACAGATAGGCATGTAC...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTTTTCTCCTGAGAGCTaGCGTAATGGCCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCFSPES*RNGQSL
Trigger: CAGAGATTGGCCATTACGCCAGCTCTCAGGAGAAAA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CAA 72 bp AATTACAACAGGGAGAAACCAAATCAGGATGTGTACTaGAGCCCAAAACAAAGGTTCCTGGTCATAAGGCTA +
Preference number: 4 (lower is better)
Translates to: NYNREKPNQDVY*SPKQRFLVIRL
Trigger: TAGCCTTATGACCAGGAACCTTTGTTTTGGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
3UTR CAA 72 bp CTTACAGAGAAGGCCTATCATCAGCATCTTGGGGGTTaGATAGTACATAATTACAATGCTACACAGGTGACT +
Preference number: 4 (lower is better)
Translates to: LTEKAYHQHLGG*IVHNYNATQVT
Trigger: AGTCACCTGTGTAGCATTGTAATTATGTACTATCAAACCCCCAAGATGCTGATGATAGGCCTTCTCTGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTCATGTGCTTGGAAATaGGTTCCCTTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTSCAWK*VPFQPP
Trigger: AGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTCATGTGCTTGGAAATaGGTTCCCTTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVSCAWK*VPFQPP
Trigger: AGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATCATGTGCTTGGAAATaGGTTCCCTTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVSCAWK*VPFQPP
Trigger: AGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGVLLAL*LPFSAY
Trigger: ATAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCTTCCAGTTTTGACGTaGACTGACATCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYLPVLT*TDIHIQ
Trigger: CTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACTTCCAGTTTTGACGTaGACTGACATCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVLPVLT*TDIHIQ
Trigger: CTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACTTCCAGTTTTGACGTaGACTGACATCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSLPVLT*TDIHIQ
Trigger: CTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCATTCCTTCCAGTTTTaGCGTGAACTGACATCCACA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTHSFQF*RELTST
Trigger: TGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAACATTCCTTCCAGTTTTaGCGTGAACTGACATCCACA +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKHSFQF*RELTST
Trigger: TGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATG...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACCTGTAGATGTTGCCTaGATTCATCCATCGTTGTGT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVPVDVA*IHPSLC
Trigger: ACACAACGATGGATGAATTCAGGCAACATCTACAGG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCCTGTAGATGTTGCCTaGATTCATCCATCGTTGTGT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVPVDVA*IHPSLC
Trigger: ACACAACGATGGATGAATTCAGGCAACATCTACAGG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTATGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNYDAGV*AVDHCV
Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCATA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCTGCAGAACCCATATaGTGCTGGAGTGTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNSAEPI*CWSVSC
Trigger: ACAGCTCACACTCCAGCATCATATGGGTTCTGCAGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGCATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATTGGCAGCAACTGTTTaGATCTTGACTCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGLAATV*ILTLCS
Trigger: ACTACACAGAGTCAAGATTCAAACAGTTGCTGCCAA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCAAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: TYVYTLRSSGVRAKYSLSKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...TGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTTTTCCATGTTACACCTaGCTTAGTACTACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSFPCYT*LSTTQV
Trigger: TACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAA...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCAACAGTGCTTCACTATaGGAAGGATTCTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPNSASL*EGFLQR
Trigger: TCTCTGTAAGAATCCTTCTCATAGTGAAGCACTGTT...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACCCAACATATCCGGTaGACAAAACATCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSTQHIR*TKHQQC
Trigger: GCACTGTTGATGTTTTGTTCACCGGATATGTTGGGT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTTACATGACCTACAATTaGTATGCAACAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSRPFLLPNISGEQNINSYMTYN*YATAFL
Trigger: AAGGAAAGCTGTTGCATATCAATTGTAGGTCATGTA...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGCAAGCATTTCTTATTaGGCCTCTGTCTACGACTTC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVASISY*ASVYDF
Trigger: GAAGTCGTAGACAGAGGCGCAATAAGAAATGCTTGC...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGCAAGCATTTCTTATTaGGCCTCTGTCTACGACTTC +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSASISY*ASVYDF
Trigger: GAAGTCGTAGACAGAGGCGCAATAAGAAATGCTTGC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGTTGCCTGTAGATGTTaGCTGAATTCATCCATCGTT +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSVACRC*LNSSIV
Trigger: AACGATGGATGAATTCAGGCAACATCTACAGGCAAC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKKSMSW*WWDVAL
Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCKSMSW*WWDVAL
Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGTGGCATTGAGATCTaGAGAACCCATATGATGCTG +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTCGIEI*RTHMML
Trigger: CAGCATCATATGGGTTCTGCAGATCTCAATGCCACA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTGTGGCATTGAGATCTaGAGAACCCATATGATGCTG +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCCGIEI*RTHMML
Trigger: CAGCATCATATGGGTTCTGCAGATCTCAATGCCACA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCCAGCTGCCAACTTTGTaGTCTGACATACTTGAATTA +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPQLPTL*SDILEL
Trigger: TAATTCAAGTATGTCAGAGCACAAAGTTGGCAGCTG...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGAGAACATGGGTTTTaGTGTCAGACAGCCTTAGGT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCREHGF*CQTALG
Trigger: ACCTAAGGCTGTCTGACAGCAAAACCCATGTTCTCT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACATATTTTTCATCCATaGTCATCGGAAAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVHIFHP*SSERPG
Trigger: TCCGGGCCTTTCCGATGACCATGGATGAAAAATATG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRISMSWC*WDVALW
Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACGGATTCACCTTGTTTaGCAGCAACTGTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGRIHLV*QQLFES
Trigger: AGATTCAAACAGTTGCTGCCAAACAAGGTGAATCCG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGCFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCGTACATGCCTATCTGTaGTACCCACTTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPVHAYL*YPLKYV
Trigger: TACATACTTAAGTGGGTACCACAGATAGGCATGTAC...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCCGGATTCACCTTGTTTaGCAGCAACTCAAATGTGTA +
Preference number: 4 (lower is better)
Translates to: YICVYFAILRCSCQIFSLRIHLV*QQLKCV
Trigger: TACACATTTGAGTTGCTGCCAAACAAGGTGAATCCG...GAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAAATTGGTTCTTCCGTTaGTTTGTCAAGGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSNWFFR*FVKAVH
Trigger: ATGCACTGCCTTGACAAATCAACGGAAGAACCAATT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATTGGTTCTTCCGTTaGTTTGTCAAGGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVNWFFR*FVKAVH
Trigger: ATGCACTGCCTTGACAAATCAACGGAAGAACCAATT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAGAGACGGTCATTGTTaGATGATTCCAGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIRDGHC*MIPGGS
Trigger: GCTTCCTCCTGGAATCATTCAACAATGACCGTCTCT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTVLLAL*LPFSAY
Trigger: ATAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVVLLAL*LPFSAY
Trigger: ATAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSSFDVN*HPHSVF
Trigger: AAAGACTGAATGTGGATGTCAGTTCACGTCAAAACT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTATCCATCGTTGTGTTTaGGATGCTCATATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSIHRCV*DAHIPK
Trigger: TTTAGGGATATGAGCATCTCAAACACAACGATGGAT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACAACTGTTTGAATCTTaGCTCTGTGTAGTTTGGATG +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGQLFES*LCVVWM
Trigger: CATCCAAACTACACAGAGTCAAGATTCAAACAGTTG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATTGGCAGCAACTGTTTaGATCTTGACTCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKLAATV*ILTLCS
Trigger: ACTACACAGAGTCAAGATTCAAACAGTTGCTGCCAA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTTGGCAGCAACTGTTTaGATCTTGACTCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLAATV*ILTLCS
Trigger: ACTACACAGAGTCAAGATTCAAACAGTTGCTGCCAA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTACATGTTTGAAAACGTaGAACGATGACTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSTCLKT*NDDSLE
Trigger: CTCCAAAGAGTCATCGTTTCACGTTTTCAAACATGT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCTTTTACAGCCACACTTaGGACAATGACGTAAACTTA +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPFYSHT*DNDVNL
Trigger: TAAGTTTACGTCATTGTCTCAAGTGTGGCTGTAAAA...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCACAACCACTTTTTGTaGGGCTGTGCGTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNHNHFL*GCAFPN
Trigger: ATTAGGGAACGCACAGCCTCACAAAAAGTGGTTGTG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTCCTTCTGGCTAATTTaGCATAGGAAAGGCACACAA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTSFWLI*HRKGTQ
Trigger: TTGTGTGCCTTTCCTATGTCAAATTAGCCAGAAGGA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAGGTTCTGTGATTACTaGGAGAACTACATCATGAGA +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGRFCDY*ENYIMR
Trigger: TCTCATGATGTAGTTCTCTCAGTAATCACAGAACCT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409096.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACTCAAAGGGCTGTCATaGAGATTAAATGAGAACGTC +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVLKGLS*RLNENV
Trigger: GACGTTCTCATTTAATCTTCATGACAGCCCTTTGAG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGTTGCCTGTAGATGTTaGCTGAATTCATCCATCGTT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVVACRC*LNSSIV
Trigger: AACGATGGATGAATTCAGGCAACATCTACAGGCAAC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTC +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNRASYL*TSNTNF
Trigger: GAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGWKVET*NMCFRV
Trigger: TACACGGAAGCACATATTGCAAGTTTCCACTTTCCA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVSSSTF*LVSFLS
Trigger: AGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCSSSTF*LVSFLS
Trigger: AGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCAGCTGCCAACTTTGTaGTCTGACATACTTGAATTA +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSQLPTL*SDILEL
Trigger: TAATTCAAGTATGTCAGAGCACAAAGTTGGCAGCTG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTCACCAAAATTTCTCTaGACCAACAGGATGGAATGG +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNSPKFL*TNRMEW
Trigger: CCATTCCATCCTGTTGGTGCAGAGAAATTTTGGTGA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCGGATTCACCTTGTTTaGCAGCAACTGTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYRIHLV*QQLFES
Trigger: AGATTCAAACAGTTGCTGCCAAACAAGGTGAATCCG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCGGATTCACCTTGTTTaGCAGCAACTGTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTRIHLV*QQLFES
Trigger: AGATTCAAACAGTTGCTGCCAAACAAGGTGAATCCG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACGGATTCACCTTGTTTaGCAGCAACTGTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVRIHLV*QQLFES
Trigger: AGATTCAAACAGTTGCTGCCAAACAAGGTGAATCCG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVCFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTCFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CCA 90 bp GTTACCTCCGCTACTAGAACATTGTGCTGCATCTTCTTTCTAGATTTCATTATCTGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VTSATRTLCCIFFLDFIICFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...GATAATGAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGAGGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATTTTCTCCTGAGAGCTaGCGTAATGGCCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIFSPES*RNGQSL
Trigger: CAGAGATTGGCCATTACGCCAGCTCTCAGGAGAAAA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATCATGTGCTTGGAAATaGGTTCCCTTTCAACCACCT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRISCAWK*VPFQPP
Trigger: AGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAAACACTTTTATTTGTaGGAAGTCTCCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGKHFYL*EVSLPS
Trigger: ACTTGGCAAGGAGACTTCTCACAAATAAAAGTGTTT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAAACACTTTTATTTGTaGGAAGTCTCCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSKHFYL*EVSLPS
Trigger: ACTTGGCAAGGAGACTTCTCACAAATAAAAGTGTTT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSSFDVN*HPHSVF
Trigger: AAAGACTGAATGTGGATGTCAGTTCACGTCAAAACT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCTTCCAGTTTTGACGTaGACTGACATCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNLPVLT*TDIHIQ
Trigger: CTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACATTCCTTCCAGTTTTaGCGTGAACTGACATCCACA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIHSFQF*RELTST
Trigger: TGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAATCCATCGTTGTGTTTaGGATGCTCATATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKIHRCV*DAHIPK
Trigger: TTTAGGGATATGAGCATCTCAAACACAACGATGGAT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTATCCATCGTTGTGTTTaGGATGCTCATATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVIHRCV*DAHIPK
Trigger: TTTAGGGATATGAGCATCTCAAACACAACGATGGAT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAATCCATCGTTGTGTTTaGGATGCTCATATCCCTAAA +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSIHRCV*DAHIPK
Trigger: TTTAGGGATATGAGCATCTCAAACACAACGATGGAT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCCTGTAGATGTTGCCTaGATTCATCCATCGTTGTGT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNPVDVA*IHPSLC
Trigger: ACACAACGATGGATGAATTCAGGCAACATCTACAGG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAACATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCAACTGTTTGAATCTTaGCTCTGTGTAGTTTGGATG +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVQLFES*LCVVWM
Trigger: CATCCAAACTACACAGAGTCAAGATTCAAACAGTTG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACCAACTGTTTGAATCTTaGCTCTGTGTAGTTTGGATG +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNQLFES*LCVVWM
Trigger: CATCCAAACTACACAGAGTCAAGATTCAAACAGTTG...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACAACTGTTTGAATCTTaGCTCTGTGTAGTTTGGATG +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSQLFES*LCVVWM
Trigger: CATCCAAACTACACAGAGTCAAGATTCAAACAGTTG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACATTTACATCAACACTaGAGACCTGGGGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVHLHQH*RPGEMK
Trigger: TTTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATG...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCATTTACATCAACACTaGAGACCTGGGGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCHLHQH*RPGEMK
Trigger: TTTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATATCAGGATGTGTACTTaGGCCCAAAACAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNIRMCT*AQNKGS
Trigger: GGAACCTTTGTTTTGGGCTCAAGTACACATCCTGAT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTACATGTTTGAAAACGTaGAACGATGACTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTTCLKT*NDDSLE
Trigger: CTCCAAAGAGTCATCGTTTCACGTTTTCAAACATGT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAACCCAACATATCCGGTaGACAAAACATCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRITQHIR*TKHQQC
Trigger: GCACTGTTGATGTTTTGTTCACCGGATATGTTGGGT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAATCTTGAAGGTTCTGTaGTTACTGAGAGAACTACAT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGILKVL*LLRELH
Trigger: ATGTAGTTCTCTCAGTAATCACAGAACCTTCAAGAT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409096.5
CDS-3UTR GCA 90 bp AATTTAGTACATCTTCTCGCACCTTTACAGTGGAGAAATCTGGCGGACACCAATCAAAACCATTGTATATaGATTTCTATAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NLVHLLAPLQWRNLADTNQNHCI*ISIELL
Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...ATTGGTGTCCGCCAGATTTCTCCACTGTAAAGGTGCGAGAAGATGTACTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR GCA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATGATTTGTCAAGGCAGTaGATCACTCGTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYDLSRQ*ITRSIS
Trigger: AGAAATAGAACGAGTGATGCACTGCCTTGACAAATC...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATTTGTCAAGGCAGTaGATCACTCGTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTDLSRQ*ITRSIS
Trigger: AGAAATAGAACGAGTGATGCACTGCCTTGACAAATC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGATTTGTCAAGGCAGTaGATCACTCGTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKDLSRQ*ITRSIS
Trigger: AGAAATAGAACGAGTGATGCACTGCCTTGACAAATC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTGATTTGTCAAGGCAGTaGATCACTCGTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCDLSRQ*ITRSIS
Trigger: AGAAATAGAACGAGTGATGCACTGCCTTGACAAATC...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIKSMSW*WWDVAL
Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGTGGCATTGAGATCTaGAGAACCCATATGATGCTG +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNCGIEI*RTHMML
Trigger: CAGCATCATATGGGTTCTGCAGATCTCAATGCCACA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCATGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSWKVET*NMCFRV
Trigger: TACACGGAAGCACATATTGCAAGTTTCCACTTTCCA...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKWKVET*NMCFRV
Trigger: TACACGGAAGCACATATTGCAAGTTTCCACTTTCCA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCWKVET*NMCFRV
Trigger: TACACGGAAGCACATATTGCAAGTTTCCACTTTCCA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTTTAAATATAACCAGCTaGCAACTTTGTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLNITS*QLCALT
Trigger: TGTCAGAGCACAAAGTTGGCAGCTGGTTATATTTAA...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCAGTATAATCCCTCATaGATCAACAAAGGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVQYNPS*INKGKC
Trigger: GCACTTTCCTTTGTTGATGCATGAGGGATTATACTG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCATGGTCATCTGGAAAGTaGAAACTTGCAATATGTGCT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSWSSGK*KLAICA
Trigger: AGCACATATTGCAAGTTTCCACTTTCCAGATGACCA...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGGTCATCTGGAAAGTaGAAACTTGCAATATGTGCT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTWSSGK*KLAICA
Trigger: AGCACATATTGCAAGTTTCCACTTTCCAGATGACCA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTGGTCATCTGGAAAGTaGAAACTTGCAATATGTGCT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVWSSGK*KLAICA
Trigger: AGCACATATTGCAAGTTTCCACTTTCCAGATGACCA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTGGTCATCTGGAAAGTaGAAACTTGCAATATGTGCT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCWSSGK*KLAICA
Trigger: AGCACATATTGCAAGTTTCCACTTTCCAGATGACCA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CCA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCAAGATAAAAATACTCTaGAAGCACAGGATATCTGAC +
Preference number: 4 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPKIKIL*KHRISD
Trigger: GTCAGATATCCTGTGCTTCCAGAGTATTTTTATCTT...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAACCAACAGGATGGAATaGTTAGGATGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGTNRME*LGCIFL
Trigger: AAGAAAAATGCATCCTAACCATTCCATCCTGTTGGT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACAAAGCTATTTTTGCATaGCTCACTCGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNKAIFA*LTRGQL
Trigger: AAGTTGACCTCGAGTGAGCCATGCAAAAATAGCTTT...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCCTAGTCCAAATCAGTaGACTAATGTCACATTCCAT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTPSPNQ*TNVTFH
Trigger: ATGGAATGTGACATTAGTCCACTGATTTGGACTAGG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTTCTGGCTTTCCATCTaGAAAAATTCTGCAGACATT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVFWLSI*KNSADI
Trigger: AATGTCTGCAGAATTTTTTCAGATGGAAAGCCAGAA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATTCTGGCTTTCCATCTaGAAAAATTCTGCAGACATT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVFWLSI*KNSADI
Trigger: AATGTCTGCAGAATTTTTTCAGATGGAAAGCCAGAA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAACACTTTTATTTGTaGGAAGTCTCCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVKHFYL*EVSLPS
Trigger: ACTTGGCAAGGAGACTTCTCACAAATAAAAGTGTTT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAAGGGAGTAAAGGCTTaGTCTCAATGGTCTAGAACA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNKGVKA*SQWSRT
Trigger: TGTTCTAGACCATTGAGATCAAGCCTTTACTCCCTT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCATAAGGCTAGAAGATaGGTAAGTGCAAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNHKARR*VSASGR
Trigger: TCTACCACTTGCACTTACTCATCTTCTAGCCTTATG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTTTCCATGTTACACCTaGCTTAGTACTACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVFPCYT*LSTTQV
Trigger: TACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACCCACACTTGAGACAATaGCGTAAACTTAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNPHLRQ*RKLKLY
Trigger: GTAAAGTTTAAGTTTACGTCATTGTCTCAAGTGTGG...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCATGATTTTTGCAGTTaGAAAACTATGTATCCACCC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVHDFCS*KTMYPP
Trigger: GGGTGGATACATAGTTTTTCAACTGCAAAAATCATG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACCATGATTTTTGCAGTTaGAAAACTATGTATCCACCC +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNHDFCS*KTMYPP
Trigger: GGGTGGATACATAGTTTTTCAACTGCAAAAATCATG...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTTTAGAAACCTAAGATaGTGCCAGTGTACTAGTCTT +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVFRNLR*CQCTSL
Trigger: AAGACTAGTACACTGGCATCATCTTAGGTTTCTAAA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTTTAGAAACCTAAGATaGTGCCAGTGTACTAGTCTT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCFRNLR*CQCTSL
Trigger: AAGACTAGTACACTGGCATCATCTTAGGTTTCTAAA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCATACATGACCTACAATTaGTATGCAACAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSYMTYN*YATAFL
Trigger: AAGGAAAGCTGTTGCATATCAATTGTAGGTCATGTA...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATGTTGCCTGTAGATGTTaGCTGAATTCATCCATCGTT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNVACRC*LNSSIV
Trigger: AACGATGGATGAATTCAGGCAACATCTACAGGCAAC...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNSSSTF*LVSFLS
Trigger: AGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRISSSTF*LVSFLS
Trigger: AGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNHMCIL*DPQVFV
Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTTAAATATAACCAGCTaGCAACTTTGTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTLNITS*QLCALT
Trigger: TGTCAGAGCACAAAGTTGGCAGCTGGTTATATTTAA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRICFFPL*VGFTLF
Trigger: AAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRISFDVN*HPHSVF
Trigger: AAAGACTGAATGTGGATGTCAGTTCACGTCAAAACT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACATAAAATGTGGCATTaGGATCTGCAGAACCCATAT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIHKMWH*DLQNPY
Trigger: ATATGGGTTCTGCAGATCTCAATGCCACATTTTATG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCACAAAGCACATGTTTaGAAACGTGAAACGATGACT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNHKAHV*KRETMT
Trigger: AGTCATCGTTTCACGTTTTCAAACATGTGCTTTGTG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAATGATAGAATCTCTTaGACGCTCATCGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNNDRIS*TLIDSH
Trigger: ATGACTGTCGATGAGCGTTCAAGAGATTCTATCATT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCAAAACCATTGTATATaGATTTCTATAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTQNHCI*ISIELL
Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264414.9
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCAAAACCATTGTATATaGATTTCTATAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVQNHCI*ISIELL
Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264414.9
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNETCNM*FRVLEP
Trigger: TGGCTCTAATACACGGAAGCACATATTGCAAGTTTC...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNWKVET*NMCFRV
Trigger: TACACGGAAGCACATATTGCAAGTTTCCACTTTCCA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCTRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: FTFSRGTVKMISTGINVVTRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATAAGTCCTTCAATACGTTTCTTAATAACAACTGGACTTGGTAAGAATCGCGCCACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: ISPSIRFLITTGLGKNRATRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...GGCGCGATTCTTACCAAGTCCAGTTGTTATTAAGAAACGTATTGAAGGACTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR GCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVTRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTGTGCGTTCCCTAATTaGAATGAATTTTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCCAFPN*NEFSVF
Trigger: AAAGACTGAAAATTCATTGCAATTAGGGAACGCACA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGTGCGTTCCCTAATTaGAATGAATTTTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VKMISTGINVVKPEAQSTCAFPN*NEFSVF
Trigger: AAAGACTGAAAATTCATTGCAATTAGGGAACGCACA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATGGTCATCTGGAAAGTaGAAACTTGCAATATGTGCT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIWSSGK*KLAICA
Trigger: AGCACATATTGCAAGTTTCCACTTTCCAGATGACCA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CCA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGAAACGATGACTCTTTaGAGGACAATAGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: TVKMISTGINVVKPEAQSETMTL*RTIAKY
Trigger: ATATTTAGCTATTGTCCTCCAAAGAGTCATCGTTTC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTGAAACGATGACTCTTTaGAGGACAATAGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCETMTL*RTIAKY
Trigger: ATATTTAGCTATTGTCCTCCAAAGAGTCATCGTTTC...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTAAGATAAAAATACTCTaGAAGCACAGGATATCTGAC +
Preference number: 4 (lower is better)
Translates to: MISTGINVVKPEAQSTDVKIKIL*KHRISD
Trigger: GTCAGATATCCTGTGCTTCCAGAGTATTTTTATCTT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAAAGCTATTTTTGCATaGCTCACTCGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIKAIFA*LTRGQL
Trigger: AAGTTGACCTCGAGTGAGCCATGCAAAAATAGCTTT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTTCTGGCTTTCCATCTaGAAAAATTCTGCAGACATT +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNFWLSI*KNSADI
Trigger: AATGTCTGCAGAATTTTTTCAGATGGAAAGCCAGAA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR TCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAAACACTTTTATTTGTaGGAAGTCTCCTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIKHFYL*EVSLPS
Trigger: ACTTGGCAAGGAGACTTCTCACAAATAAAAGTGTTT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR TCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTTTTACAGCCACACTTaGGACAATGACGTAAACTTA +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNFYSHT*DNDVNL
Trigger: TAAGTTTACGTCATTGTCTCAAGTGTGGCTGTAAAA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAGCTACTAGAACATTGTaGTGCATCTTCTTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIATRTL*CIFFLD
Trigger: ATCTAGAAAGAAGATGCAGCACAATGTTCTAGTAGC...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAACCAACAGGATGGAATaGTTAGGATGCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRITNRME*LGCIFL
Trigger: AAGAAAAATGCATCCTAACCATTCCATCCTGTTGGT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACAAAACCATTGTATATaGATTTCTATAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIQNHCI*ISIELL
Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264414.9
ENST00000409096.5
ENST00000409777.5
CDS-3UTR GCA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: FNDLKELPSPCEEYSPRITRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR GCA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATACTAGAACATTGTGCTaGATCTTCTTTCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNTRTLC*IFFLDF
Trigger: GAAATCTAGAAAGAAGATGCAGCACAATGTTCTAGT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS GCA 90 bp TGGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATGGTaGTCGTCCCCTCCCCGGCGGCGGCTTCAGGTCGCGCTCCGCGAC +
Preference number: 5 (lower is better)
Translates to: WCPSGCPCLCSDSTW*SSPPRRRLQVALRD
Trigger: GTCGCGGAGCGCGACCTGAAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS CCA 90 bp TCTTGGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATaGTGCTCGTCCCCTCCCCGGCGGCGGCTTCAGGTCGCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: SWCPSGCPCLCSDST*CSSPPRRRLQVALR
Trigger: GCGGAGCGCGACCTGAAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 90 bp AGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTGCCTTTaGTCAGATTCGACATGGTGCTCGTCCCCTCCCCGGCGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RPGSASWCPSGCPCL*SDSTWCSSPPRRRL
Trigger: AAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 90 bp CCGGAAAGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACATGGTGCTCGTCCCCTCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: PERPGSASWCPSGCP*LCSDSTWCSSPPRR
Trigger: CCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344951.8
CDS GCA 90 bp TCGGAAAGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACATGGTGCTCGTCCCCTCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SERPGSASWCPSGCP*LCSDSTWCSSPPRR
Trigger: CCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS GCA 90 bp CTCGCACCGGAAAGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGATTCGACATGGTGCTCGTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LAPERPGSASWCPSG*PCLCSDSTWCSSPP
Trigger: GGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344951.8
CDS GCA 90 bp TGGTCATCGGAAAGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGATTCGACATGGTGCTCGTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: WSSERPGSASWCPSG*PCLCSDSTWCSSPP
Trigger: GGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGATGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS CCA 90 bp AATTTAGTACATCTTCTCGCACCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATGG +
Preference number: 5 (lower is better)
Translates to: NLVHLLAPERPGSAS*CPSGCPCLCSDSTW
Trigger: CCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAGAAGATGTACTAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344951.8
CDS TCA 90 bp GCATGTCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTGACTaGGTGGGCCAATATCCTGTCGTGAGCACCCGGACTGTAAGATCA +
Preference number: 5 (lower is better)
Translates to: ACLGAGGMLHFGVAD*VGQYPVVSTRTVRS
Trigger: TGATCTTACAGTCCGGGTGCTCACGACAGGATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS CCA 90 bp CATATTTTTCATCCATGGTCATCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATGG +
Preference number: 5 (lower is better)
Translates to: HIFHPWSSERPGSAS*CPSGCPCLCSDSTW
Trigger: CCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGATGACCATGGATGAAAAATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS TCA 90 bp AAAAGCATGTCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCCTGTCGTGAGCACCCGGACTGTAAG +
Preference number: 5 (lower is better)
Translates to: KSMSWCWWDVALWCG*LSGPISCREHPDCK
Trigger: CTTACAGTCCGGGTGCTCACGACAGGATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS CCA 90 bp GAAGGGGTTGTTGTGCAAGTGCCTATATATGACCTATATGCACGCTaGGGGATGGAATTTGAGAAAGGCAGGTGGTGGTGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EGVVVQVPIYDLYAR*GMEFEKGRWWWWWW
Trigger: CCACCACCACCACCACCACCTGCCTTTCTCAAATTCCATCCCCCAGCGTGCATATAGGTCATATATAGGCACTTGCACAACAACCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACGGCTGCCCGTGCCTTaGCTCAGATTCGACATGGTG +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSRLPVP*LRFDMV
Trigger: CACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCGGCTGCCCGTGCCTTaGCTCAGATTCGACATGGTG +
Preference number: 5 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYRLPVP*LRFDMV
Trigger: CACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAGGTGCTGGTGGGATGTaGCACTTTGGTGTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGGAGGM*HFGVAD
Trigger: GTCAGCCACACCAAAGTGCAACATCCCACCAGCACC...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS TCA 90 bp GTAGAAACCGTAAAATTGCAAAGCAGCACATGGGGCATTGCTGACTaGGGCATGGGCATAGATAGCCACGAGACAGCAGATTGTACAATT +
Preference number: 5 (lower is better)
Translates to: VETVKLQSSTWGIAD*GMGIDSHETADCTI
Trigger: AATTGTACAATCTGCTGTCTCGTGGCTATCTATGCCCATGCCTCAGTCAGCAATGCCCCATGTGCTGCTTTGCAATTTTACGGTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGTGCTGGTGGGATGTaGCACTTTGGTGTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVGAGGM*HFGVAD
Trigger: GTCAGCCACACCAAAGTGCAACATCCCACCAGCACC...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTGGTGCTGGTGGGATGTaGCACTTTGGTGTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCGAGGM*HFGVAD
Trigger: GTCAGCCACACCAAAGTGCAACATCCCACCAGCACC...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS GCA 90 bp TCCATCTTCCTTTTTAACTGGTCCATAAAATGTGGCATTGAGATCTaGAGAACCCATATGATGCTGGAGTGTGAGCTGTCGACCACTGTG +
Preference number: 5 (lower is better)
Translates to: SIFLFNWSIKCGIEI*RTHMMLECELSTTV
Trigger: CACAGTGGTCGACAGCTCACACTCCAGCATCATATGGGTTCTGCAGATCTCAATGCCACATTTTATGGACCAGTTAAAAAGGAAGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000487558.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATCTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: IAPLSTTSPFRSLAIISNLLSAL*QSYPIE
Trigger: CTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAG...ATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGTGGGATGTTGCACTTaGGTGTGGCTGACTGAGTGG +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSVGCCT*VWLTEW
Trigger: CCACTCAGTCAGCCACACCAAAGTGCAACATCCCAC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACGTGGGATGTTGCACTTaGGTGTGGCTGACTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNVGCCT*VWLTEW
Trigger: CCACTCAGTCAGCCACACCAAAGTGCAACATCCCAC...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGTGGGATGTTGCACTTaGGTGTGGCTGACTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVVGCCT*VWLTEW
Trigger: CCACTCAGTCAGCCACACCAAAGTGCAACATCCCAC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: GSRPFLLPNISGEQNINSIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 90 bp ACTATAGCAGCTTCTATCTCATGTTTTCTGTCGTCGTCTACTTTCTaGCTTGTTTCTTTCCTCTCTGGGTCGGATTCACCTTGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TIAASISCFLSSSTF*LVSFLSGSDSPCLA
Trigger: TGCCAAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGACAGAAAACATGAGATAGAAGCTGCTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000497715.1
ENST00000617432.4
CDS GCA 90 bp ACTGGTAGAGAACATGGGTTTTGCTGTCAGACAGCCTTAGGTTTGTaGCACAGCTTTGTTACTCACAAGCCATGTGACCTTGAGAAAATT +
Preference number: 5 (lower is better)
Translates to: TGREHGFCCQTALGL*HSFVTHKPCDLEKI
Trigger: AATTTTCTCAAGGTCACATGGCTTGTGAGTAACAAAGCTGTGGCACAAACCTAAGGCTGTCTGACAGCAAAACCCATGTTCTCTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CAA 90 bp GCATTTCTTATTGCGCCTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCGTTCTCCACATTATTTaGTTGTACATACACACGGTC +
Preference number: 5 (lower is better)
Translates to: AFLIAPLSTTSPFRSLAIVLHII*LYIHTV
Trigger: GACCGTGTGTATGTACAACAAAATAATGTGGAGAAC...GATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAGGCGCAATAAGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR CAA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCGGTTCTTCCGTTGATTaGTCAAGGCAGTGCATCACT +
Preference number: 5 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPGSSVD*SRQCIT
Trigger: AGTGATGCACTGCCTTGACAAATCAACGGAAGAACC...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTTCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSSQKHV*VLVGCC
Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS GCA 90 bp GGAAACTTGCAATATGTGCTTCCGTGTATTAGAGCCAGTTACTTGTaGACCTCCAACACCAACTTCAGATCCATCTTCCTTTTTAACTGG +
Preference number: 5 (lower is better)
Translates to: GNLQYVLPCIRASYL*TSNTNFRSIFLFNW
Trigger: CCAGTTAAAAAGGAAGATGGATCTGAAGTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAATACACGGAAGCACATATTGCAAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000487558.1
ENST00000617432.4
CDS GCA 90 bp ACGTCAGTAGATTTAACACAGCCCAGAGCACAGTATAATCCCTCATaGATCAACAAAGGAAAGTGCCCAATGATAGAATCTCTTGAACGC +
Preference number: 5 (lower is better)
Translates to: TSVDLTQPRAQYNPS*INKGKCPMIESLER
Trigger: GCGTTCAAGAGATTCTATCATTGGGCACTTTCCTTTGTTGATGCATGAGGGATTATACTGTGCTCTGGGCTGTGTTAAATCTACTGACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CAA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTTTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSRPFLLPNISGEQNINSLKRRS*LNDSRR
Trigger: CCTCCTGGAATCATTCAACAATGACCGTCTCTTTAA...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAGTGGGATGTTGCACTTaGGTGTGGCTGACTGAGTGG +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIVGCCT*VWLTEW
Trigger: CCACTCAGTCAGCCACACCAAAGTGCAACATCCCAC...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCATCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSSQKHV*VLVGCC
Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNSQKHV*VLVGCC
Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVSQKHV*VLVGCC
Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATGGGTCGGATTCACCTaGTTTGGCAGCAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVWVGFT*FGSNCL
Trigger: CAAACAGTTGCTGCCAAACAAGGTGAATCCGACCCA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTGGGTCGGATTCACCTaGTTTGGCAGCAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTWVGFT*FGSNCL
Trigger: CAAACAGTTGCTGCCAAACAAGGTGAATCCGACCCA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTGGGTCGGATTCACCTaGTTTGGCAGCAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCWVGFT*FGSNCL
Trigger: CAAACAGTTGCTGCCAAACAAGGTGAATCCGACCCA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: GSRPFLLPNISGEQNINSTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp TACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCTGGGTCGGATTCACCTaGTTTGGCAGCAACTCAAAT +
Preference number: 5 (lower is better)
Translates to: YICVYFAILRCSCQIFSLWVGFT*FGSNSN
Trigger: ATTTGAGTTGCTGCCAAACAAGGTGAATCCGACCCA...GAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS TCA 90 bp ACTTCACACAGTAGCATCATTCTTACATTCTCATTTAGTGCATCATaGATGAGGGGTTGGAGTGGAATTCTATTCCGTAGAGGGCTACCA +
Preference number: 5 (lower is better)
Translates to: TSHSSIILTFSFSAS*MRGWSGILFRRGLP
Trigger: TGGTAGCCCTCTACGGAATAGAATTCCACTCCAACCCCTCATTCATGATGCACTAAATGAGAATGTAAGAATGATGCTACTGTGTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481135.1
CDS GCA 90 bp AAGAGCATTAATATGGTCATCTGGAAAGTGGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCAGTTACTTGTGCACCTCCAACACCA +
Preference number: 5 (lower is better)
Translates to: KSINMVIWKVETCNM*FRVLEPVTCAPPTP
Trigger: TGGTGTTGGAGGTGCACAAGTAACTGGCTCTAATACACGGAAGCACATATTGCAAGTTTCCACTTTCCAGATGACCATATTAATGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000487558.1
ENST00000617432.4
CDS CCA 90 bp ATGTTTTCTGTCGTCGTCTACTTTCTGCCTTGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTTGGCAGCAACTCAAATGTGTATTTT +
Preference number: 5 (lower is better)
Translates to: MFSVVVYFLPCFFPL*VGFTLFGSNSNVYF
Trigger: AAAATACACATTTGAGTTGCTGCCAAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGACAGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGLLSAL*QSYPIE
Trigger: CTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLLSAL*QSYPIE
Trigger: CTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGGTTCTTCCGTTGATTaGTCAAGGCAGTGCATCACT +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKGSSVD*SRQCIT
Trigger: AGTGATGCACTGCCTTGACAAATCAACGGAAGAACC...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACAATTGGTTCTTCCGTaGATTTGTCAAGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGQLVLP*ICQGSA
Trigger: TGCACTGCCTTGACAAATCAACGGAAGAACCAATTG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGACTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CAA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTAGGGATATCTGTCTCTaGCTGAATTTCCTCAAATGT +
Preference number: 5 (lower is better)
Translates to: GSRPFLLPNISGEQNINSRDICL*LNFLKC
Trigger: ACATTTGAGGAAATTCAGCAAGAGACAGATATCCCT...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp GGTTCTAGGCCTTTTCTGCTACCCAACATATCCGGTGAACAAAACATCAACAGTTACAGCATGCTCAAATaGTATGCTTGGGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: GSRPFLLPNISGEQNINSYSMLK*YAWVFV
Trigger: TACAAAGACCCAAGCATACAATTTGAGCATGCTGTA...ACTGTTGATGTTTTGTTCACCGGATATGTTGGGTAGCAGAAAAGGCCTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGATTCCTGCTAGCAACCTaGGACAACACTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGFLLAT*DNTGIM
Trigger: CATTATACCAGTGTTGTCCAAGGTTGCTAGCAGGAA...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAACAAGCCATGTGACCTaGAGAAAATTAAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGTSHVT*RKLSPG
Trigger: CCCAGGACTTAATTTTCTCAAGGTCACATGGCTTGT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCAGACAGCCTTAGGTTaGTGCCACAGCTTTGTTACT +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTQTALG*CHSFVT
Trigger: AGTAACAAAGCTGTGGCACAAACCTAAGGCTGTCTG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CAA 90 bp TACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTGCCAAATATTCTCTCTCTCGGATTCACCTTGTTaGGCAGCAACTCAAATGTGT +
Preference number: 5 (lower is better)
Translates to: YICVYFAILRCSCQIFSLSDSPC*AATQMC
Trigger: ACACATTTGAGTTGCTGCCAAACAAGGTGAATCCGA...GAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS TCA 90 bp TTAAGTCCTGGGTTCAATAACAGCATCTATCTCAAAGGGCTGTCATaGAGATTAAATGAGAACGTCAGTAGATTTAACACAGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LSPGFNNSIYLKGLS*RLNENVSRFNTAQS
Trigger: GCTCTGGGCTGTGTTAAATCTACTGACGTTCTCATTTAATCTTCATGACAGCCCTTTGAGATAGATGCTGTTATTGAACCCAGGACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCATCACCATAGCTGTTaGATGATCATTCCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSHHHSC*MIIPSL
Trigger: CAAGCTTGGAATGATCATCAAACAGCTATGGTGATG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp CTCTGTCTACGACTTCTCCTTTCCGCTCTCTTGCAATCATATCCAATAGAGTTTCTCCACATTATTTTGTaGTACATACACACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LCLRLLLSALLQSYPIEFLHIIL*YIHTVH
Trigger: ATGGACCGTGTGTATGTACAACAAAATAATGTGGAG...AAACTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAGAAGTCGTAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432260.2
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLLSAL*QSYPIE
Trigger: CTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCAATTGGTTCTTCCGTaGATTTGTCAAGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCQLVLP*ICQGSA
Trigger: TGCACTGCCTTGACAAATCAACGGAAGAACCAATTG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAACAATTGGTTCTTCCGTaGATTTGTCAAGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKQLVLP*ICQGSA
Trigger: TGCACTGCCTTGACAAATCAACGGAAGAACCAATTG...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAACAAGAGCTTTACCTaGCTCCCTCAAATAGGAACT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSNKSFT*LPQIGT
Trigger: AGTTCCTATTTGAGGGAGCAAGGTAAAGCTCTTGTT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACAAGAGCTTTACCTaGCTCCCTCAAATAGGAACT +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGNKSFT*LPQIGT
Trigger: AGTTCCTATTTGAGGGAGCAAGGTAAAGCTCTTGTT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAGTCACCCGCAATAGTTaGTTTAAAGAGACGGTCATT +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGVTRNS*FKETVI
Trigger: AATGACCGTCTCTTTAAACAAACTATTGCGGGTGAC...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATCAGGAGACCTGGAGTaGAGGTTGAGAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKSGDLE*RLRKYS
Trigger: TGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCATCAGGAGACCTGGAGTaGAGGTTGAGAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSSGDLE*RLRKYS
Trigger: TGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGA...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTCAGGAGACCTGGAGTaGAGGTTGAGAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCSGDLE*RLRKYS
Trigger: TGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTTGTTCTGTTAGCCCTTaGACTCCCTTTTTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSCSVSP*TPFFSL
Trigger: TAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAACA...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTCTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGGGTCGGATTCACCTaGTTTGGCAGCAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNWVGFT*FGSNCL
Trigger: CAAACAGTTGCTGCCAAACAAGGTGAATCCGACCCA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTAATCAGGATGTGTACTaGAGCCCAAAACAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSNQDVY*SPKQRF
Trigger: GAACCTTTGTTTTGGGCTCAAGTACACATCCTGATT...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATAACCAGCTGCCAACTTaGTGCTCTGACATACTTGAA +
Preference number: 5 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYNQLPT*CSDILE
Trigger: TTCAAGTATGTCAGAGCACAAAGTTGGCAGCTGGTT...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAACCAGCTGCCAACTTaGTGCTCTGACATACTTGAA +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKNQLPT*CSDILE
Trigger: TTCAAGTATGTCAGAGCACAAAGTTGGCAGCTGGTT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATTCCTGCTAGCAACCTaGGACAACACTGGTATAATG +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKFLLAT*DNTGIM
Trigger: CATTATACCAGTGTTGTCCAAGGTTGCTAGCAGGAA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ACATTCCAGAATAGCAGCAATCACCTTCCCTGTTTTCCTTCCTACCAAAAGTTGATTTTAAAGCTATTTTaGCATGGCTCACTCGAGGTC +
Preference number: 5 (lower is better)
Translates to: TFQNSSNHLPCFPSYQKLILKLF*HGSLEV
Trigger: GACCTCGAGTGAGCCATGCAAAAATAGCTTTAAAAT...CAACTTTTGGTAGGAAGGAAAACAGGGAAGGTGATTGCTGCTATTCTGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCATCACCATAGCTGTTaGATGATCATTCCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVHHHSC*MIIPSL
Trigger: CAAGCTTGGAATGATCATCAAACAGCTATGGTGATG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCATCACCATAGCTGTTaGATGATCATTCCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYHHHSC*MIIPSL
Trigger: CAAGCTTGGAATGATCATCAAACAGCTATGGTGATG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCTCCACATTATTTTGTaGTACATACACACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSLHIIL*YIHTVH
Trigger: ATGGACCGTGTGTATGTACAACAAAATAATGTGGAG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTGTTCTCCACATTATTTaGTTGTACATACACACGGTC +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSVLHII*LYIHTV
Trigger: GACCGTGTGTATGTACAACAAAATAATGTGGAGAAC...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAGGTTCTTCCGTTGATTaGTCAAGGCAGTGCATCACT +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIGSSVD*SRQCIT
Trigger: AGTGATGCACTGCCTTGACAAATCAACGGAAGAACC...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAACTCTCAACCACCTTTACAATaGGTTCTTCCGTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: TGINVVKPEAQSTDVGNSQPPLQ*VLPLIC
Trigger: ACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTG...AGAGTTTCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATAACAAGAGCTTTACCTaGCTCCCTCAAATAGGAACT +
Preference number: 5 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYNKSFT*LPQIGT
Trigger: AGTTCCTATTTGAGGGAGCAAGGTAAAGCTCTTGTT...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAATTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKLKRRS*LNDSRR
Trigger: CCTCCTGGAATCATTCAACAATGACCGTCTCTTTAA...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLKRRS*LNDSRR
Trigger: CCTCCTGGAATCATTCAACAATGACCGTCTCTTTAA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTLKRRS*LNDSRR
Trigger: CCTCCTGGAATCATTCAACAATGACCGTCTCTTTAA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGTCACCCGCAATAGTTaGTTTAAAGAGACGGTCATT +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSVTRNS*FKETVI
Trigger: AATGACCGTCTCTTTAAACAAACTATTGCGGGTGAC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAGTCACCCGCAATAGTTaGTTTAAAGAGACGGTCATT +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVVTRNS*FKETVI
Trigger: AATGACCGTCTCTTTAAACAAACTATTGCGGGTGAC...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTGTTCTGTTAGCCCTTaGACTCCCTTTTTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNCSVSP*TPFFSL
Trigger: TAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAACA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTATGTTCTGTTAGCCCTTaGACTCCCTTTTTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVCSVSP*TPFFSL
Trigger: TAAGCTGAAAAAGGGAGTCAAAGGGCTAACAGAACA...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATATTAGAGCCAGTTACTaGTGCACCTCCAACACCAAC +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNIRASY*CTSNTN
Trigger: GTTGGTGTTGGAGGTGCACAAGTAACTGGCTCTAAT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGGAAGGGATATCTGTCTCTaGCTGAATTTCCTCAAATGT +
Preference number: 5 (lower is better)
Translates to: ISTGINVVKPEAQSTDVGRDICL*LNFLKC
Trigger: ACATTTGAGGAAATTCAGCAAGAGACAGATATCCCT...TCCAACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTTCCGCTACTAGAACATaGTGCTGCATCTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTSATRT*CCIFFL
Trigger: TAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGA...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTTCCGCTACTAGAACATaGTGCTGCATCTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVSATRT*CCIFFL
Trigger: TAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGA...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTTCCGCTACTAGAACATaGTGCTGCATCTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCSATRT*CCIFFL
Trigger: TAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGA...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATAAGTCCTTCAATACGTTTCTTAATAACAACTGGACTTGGTAAGAATCGCGCCACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: ISPSIRFLITTGLGKNRATYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...GGCGCGATTCTTACCAAGTCCAGTTGTTATTAAGAAACGTATTGAAGGACTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCACTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSLNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp ATAAGTCCTTCAATACGTTTCTTAATAACAACTGGACTTGGTAAGAATCGCGCCCTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: ISPSIRFLITTGLGKNRALNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...GGCGCGATTCTTACCAAGTCCAGTTGTTATTAAGAAACGTATTGAAGGACTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAATCAGGATGTGTACTaGAGCCCAAAACAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCNQDVY*SPKQRF
Trigger: GAACCTTTGTTTTGGGCTCAAGTACACATCCTGATT...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAACACTGTCCTGGACTaGATAATGAAGGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKNTVLD*IMKAEN
Trigger: ATTCTCTGCCTTCATTATCAAGTCCAGGACAGTGTT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp GGAAATCTCAAATTACAACAGGGAGAAACCAAATCAGGATGTGTACTTGAGCCCATACATGACCTACAATaGATATGCAACAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GNLKLQQGETKSGCVLEPIHDLQ*ICNSFP
Trigger: AGGAAAGCTGTTGCATATCAATTGTAGGTCATGTAT...GGGCTCAAGTACACATCCTGATTTGGTTTCTCCCTGTTGTAATTTGAGATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS TCA 90 bp GGAAATGAGTTCCCTTTCAACCACCTTTACAATTGGTTCTTCCGTTaGTTTGTCAAGGCAGTGCATCACTCGTTCTATTTCTTCATTAAT +
Preference number: 5 (lower is better)
Translates to: GNEFPFNHLYNWFFR*FVKAVHHSFYFFIN
Trigger: ATTAATGAAGAAATAGAACGAGTGATGCACTGCCTTGACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTGAAAGGGAACTCATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACCTCCACATTATTTTGTaGTACATACACACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNLHIIL*YIHTVH
Trigger: ATGGACCGTGTGTATGTACAACAAAATAATGTGGAG...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCTCCACATTATTTTGTaGTACATACACACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVLHIIL*YIHTVH
Trigger: ATGGACCGTGTGTATGTACAACAAAATAATGTGGAG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCTCCACATTATTTTGTaGTACATACACACGGTCCAT +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCLHIIL*YIHTVH
Trigger: ATGGACCGTGTGTATGTACAACAAAATAATGTGGAG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGTTCTCCACATTATTTaGTTGTACATACACACGGTC +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSVLHII*LYIHTV
Trigger: GACCGTGTGTATGTACAACAAAATAATGTGGAGAAC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTGTTCTCCACATTATTTaGTTGTACATACACACGGTC +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVVLHII*LYIHTV
Trigger: GACCGTGTGTATGTACAACAAAATAATGTGGAGAAC...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACTCCTTTCCGCTCTCTaGCAATCATATCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRILLSAL*QSYPIE
Trigger: CTCTATTGGATATGATTGCAAGAGAGCGGAAAGGAG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGATGTTCAACCACCTTTACAATaGGTTCTTCCGTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: MISTGINVVKPEAQSTDVQPPLQ*VLPLIC
Trigger: ACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTG...AACATCAGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTCAACCACCTTTACAATaGGTTCTTCCGTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCQPPLQ*VLPLIC
Trigger: ACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTG...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCAGGAGACCTGGAGTaGAGGTTGAGAAAATACTCA +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNSGDLE*RLRKYS
Trigger: TGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCTGGAAAGTGGAAACTaGCAATATGTGCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNLESGN*QYVLPC
Trigger: ACACGGAAGCACATATTGCAAGTTTCCACTTTCCAG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAGGGATATCTGTCTCTaGCTGAATTTCCTCAAATGT +
Preference number: 5 (lower is better)
Translates to: FTFSRGTVKMISTGINVVRDICL*LNFLKC
Trigger: ACATTTGAGGAAATTCAGCAAGAGACAGATATCCCT...TACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAAGGGATATCTGTCTCTaGCTGAATTTCCTCAAATGT +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKRDICL*LNFLKC
Trigger: ACATTTGAGGAAATTCAGCAAGAGACAGATATCCCT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACTACAGCATGCTCAAATaGTATGCTTGGGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNYSMLK*YAWVFV
Trigger: TACAAAGACCCAAGCATACAATTTGAGCATGCTGTA...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp TTCCCCCATTCCCTTTTTAAGTTCACTGACATAAAGAATCCTTGCAATCACAACATTTTAAAGCTATTTTaGCATGGCTCACTCGAGGTC +
Preference number: 5 (lower is better)
Translates to: FPHSLFKFTDIKNPCNHNILKLF*HGSLEV
Trigger: GACCTCGAGTGAGCCATGCAAAAATAGCTTTAAAAT...GTTGTGATTGCAAGGATTCTTTATGTCAGTGAACTTAAAAAGGGAATGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS TCA 90 bp TCCCTCATGCATCAACAAAGGAAAGTGCCCAATGATAGAATCTCTTaGACGCTCATCGACAGTCATCAAATAAATGTCAGAAAGAAATAT +
Preference number: 5 (lower is better)
Translates to: SLMHQQRKVPNDRIS*TLIDSHQINVRKKY
Trigger: ATATTTCTTTCTGACATTTATTTGATGACTGTCGATGAGCGTTCAAGAGATTCTATCATTGGGCACTTTCCTTTGTTGATGCATGAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS GCA 90 bp ATATGTACTAGCCCAGAATTCTCCATTTCTACTATAGTCTTCATGTaGTTGGAAATGAGTTCCCTTTCAACCACCTTTACAATTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ICTSPEFSISTIVFM*LEMSSLSTTFTIGS
Trigger: AGAACCAATTGTAAAGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGAAGACTATAGTAGAAATGGAGAATTCTGGGCTAGTACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS GCA 90 bp CTATTATTAAAGAGCATTAATATGGTCATCTGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTATTAGAGCCAGTTACTTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: LLLKSINMVIWKVET*NMCFRVLEPVTCAP
Trigger: AGGTGCACAAGTAACTGGCTCTAATACACGGAAGCACATATTGCAAGTTTCCACTTTCCAGATGACCATATTAATGCTCTTTAATAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000487558.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATATCCGCTACTAGAACATaGTGCTGCATCTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRISATRT*CCIFFL
Trigger: TAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGA...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCCGCTACTAGAACATaGTGCTGCATCTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNSATRT*CCIFFL
Trigger: TAGAAAGAAGATGCAGCACAATGTTCTAGTAGCGGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: FKRTSQSMRRVQSKNKSNTYVYT*RSSGVR
Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACTCAATCAACTGATGTaGGAAACTCTCAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRILNQLM*ETLKGS
Trigger: ACTCCCTTTGAGAGTTTCCAACATCAGTTGATTGAG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000454323.1
ENST00000617432.4
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGAAATCTATAGTGGTTaGCCCCATTACATATCTGAA +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTEIYSG*PHYISE
Trigger: TTCAGATATGTAATGGGGCAAACCACTATAGATTTC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAGAAATCTATAGTGGTTaGCCCCATTACATATCTGAA +
Preference number: 5 (lower is better)
Translates to: TVKMISTGINVVKPEAQSEIYSG*PHYISE
Trigger: TTCAGATATGTAATGGGGCAAACCACTATAGATTTC...TGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp AAGGTGAAACCCTTAGCTTTCCATGTTACACCTGACTTAGTACTACTCAAGTATCAGCATCTTGGGGGTTaGATAGTACATAATTACAAT +
Preference number: 5 (lower is better)
Translates to: KVKPLAFHVTPDLVLLKYQHLGG*IVHNYN
Trigger: ATTGTAATTATGTACTATCAAACCCCCAAGATGCTG...ATACTTGAGTAGTACTAAGTCAGGTGTAACATGGAAAGCTAAGGGTTTCACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp GTAAAGATGATCTCTACAGGGATAAACGTTGTAAAGCCTGAAGCTCAATCAACTGCTTTCCTTCCAAGATaGACACAATATACCATATAC +
Preference number: 5 (lower is better)
Translates to: VKMISTGINVVKPEAQSTAFLPR*TQYTIY
Trigger: GTATATGGTATATTGTGTCAATCTTGGAAGGAAAGC...AGTTGATTGAGCTTCAGGCTTTACAACGTTTATCCCTGTAGAGATCATCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp ATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTGCTTTCCTTCCAAGATaGACACAATATACCATATAC +
Preference number: 5 (lower is better)
Translates to: IHIFPRNCKDDLYRDKRCAFLPR*TQYTIY
Trigger: GTATATGGTATATTGTGTCAATCTTGGAAGGAAAGC...ACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS-3UTR CAA 90 bp CACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAAACGTTGTAAAATACATGACCTACAATaGATATGCAACAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HIFPRNCKDDLYRDKRCKIHDLQ*ICNSFP
Trigger: AGGAAAGCTGTTGCATATCAATTGTAGGTCATGTAT...TTTACAACGTTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS TCA 90 bp GTTGTCTTACTAACTCAAAATGTAGCTGTAATCTCTAAGGCTTTATaGGGAGACAAGAGTATGTACTGCCAAGATTCAGTCAGTGAAATA +
Preference number: 5 (lower is better)
Translates to: VVLLTQNVAVISKAL*GDKSMYCQDSVSEI
Trigger: TATTTCACTGACTGAATCTTGGCAGTACATACTCTTGTCTCCTCATAAAGCCTTAGAGATTACAGCTACATTTTGAGTTAGTAAGACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS TCA 90 bp GAGATGCTCATATCCCTAAACATTCCTTCCAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTTAACTTAGATATCATGTTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: EMLISLNIPSSFDVN*HPHSVFNLDIMFFR
Trigger: TCTGAAAAACATGATATCTAAGTTAAAGACTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATGTTTAGGGATATGAGCATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617432.4
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAGTTCTCCACATTATTTaGTTGTACATACACACGGTC +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIVLHII*LYIHTV
Trigger: GACCGTGTGTATGTACAACAAAATAATGTGGAGAAC...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS-3UTR CAA 90 bp TTTAATGATTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATACAGCATCTTGGGGGTTaGATAGTACATAATTACAAT +
Preference number: 5 (lower is better)
Translates to: FNDLKELPSPCEEYSPRIQHLGG*IVHNYN
Trigger: ATTGTAATTATGTACTATCAAACCCCCAAGATGCTG...TATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 72 bp TCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATGGTaGTCGTCCCCTCCCCGGCGGCGGCTTCAGGTCGCG +
Preference number: 6 (lower is better)
Translates to: SGCPCLCSDSTW*SSPPRRRLQVA
Trigger: CGCGACCTGAAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS CCA 72 bp CCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATaGTGCTCGTCCCCTCCCCGGCGGCGGCTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: PSGCPCLCSDST*CSSPPRRRLQV
Trigger: GACCTGAAGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS CAA 90 bp AAGGCCCGGATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTGCCTTaGCTCAGATTCGACATGGTGCTCGTCCCCTCCCCGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: KARIRILVSFRLPVP*LRFDMVLVPSPAAA
Trigger: AGCCGCCGCCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 72 bp TCCGCATCTTGGTGTCCTTCCGGCTGCCCGTGCCTTTaGTCAGATTCGACATGGTGCTCGTCCCCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: SASWCPSGCPCL*SDSTWCSSPPR
Trigger: CCGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS GCA 72 bp CCCGGATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACATGGTGCTCGTCCCCT +
Preference number: 6 (lower is better)
Translates to: PGSASWCPSGCP*LCSDSTWCSSP
Trigger: AGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS CAA 72 bp ATCCGCATCTTGGTGTCCTTCCGGCTGCCCGTGCCTTaGCTCAGATTCGACATGGTGCTCGTCCCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: IRILVSFRLPVP*LRFDMVLVPSP
Trigger: CGGGGAGGGGACGAGCACCATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264414.9
ENST00000344951.8
CDS CCA 72 bp CATCTTCTCGCACCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGAT +
Preference number: 6 (lower is better)
Translates to: HLLAPERPGSAS*CPSGCPCLCSD
Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAGAAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344951.8
CDS CCA 72 bp CATCCATGGTCATCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGAT +
Preference number: 6 (lower is better)
Translates to: HPWSSERPGSAS*CPSGCPCLCSD
Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGATGACCATGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS TCA 72 bp GGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTGACTaGGTGGGCCAATATCCTGTCGTGAGCACCCGGACT +
Preference number: 6 (lower is better)
Translates to: GAGGMLHFGVAD*VGQYPVVSTRT
Trigger: AGTCCGGGTGCTCACGACAGGATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS TCA 72 bp TCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTaGCTGAGTGGGCCAATATCCTGTCGTGAGCACCCG +
Preference number: 6 (lower is better)
Translates to: SWCWWDVALWCG*LSGPISCREHP
Trigger: CGGGTGCTCACGACAGGATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS CAA 90 bp GAATTTAGTACATCTTCTCGCACCGGAAAGGCCCGGATCCGCATCTaGGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATG +
Preference number: 6 (lower is better)
Translates to: EFSTSSRTGKARIRI*VSFRLPVPLLRFDM
Trigger: CATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAGAAGATGTACTAAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344951.8
CDS CAA 90 bp ACATATTTTTCATCCATGGTCATCGGAAAGGCCCGGATCCGCATCTaGGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGATTCGACATG +
Preference number: 6 (lower is better)
Translates to: TYFSSMVIGKARIRI*VSFRLPVPLLRFDM
Trigger: CATGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGATGACCATGGATGAAAAATATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264414.9
CDS CAA 72 bp CAAAAGCATGTCTTGGTGCTGGTGGGATGTTGCACTTaGGTGTGGCTGACTGAGTGGGCCAATATCCTGTCG +
Preference number: 6 (lower is better)
Translates to: QKHVLVLVGCCT*VWLTEWANILS
Trigger: CGACAGGATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS TCA 72 bp TTCCCTCAGTTGGTTTCCCCTGAAGTCTTTTCCAGCTaGACAAATGTCCACTCCATCCTTCCAGCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: FPQLVSPEVFSS*TNVHSILPAAP
Trigger: CGGAGCAGCTGGAAGGATGGAGTGGACATTTGTTCAGCTGGAAAAGACTTCAGGGGAAACCAACTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546102.1
CDS CAA 72 bp CTATATATGACCTATATGCACGCTGGGGGATGGAATTaGAGAAAGGCAGGTGGTGGTGGTGGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: LYMTYMHAGGWN*RKAGGGGGGGG
Trigger: ACCACCACCACCACCACCACCACCTGCCTTTCTCAAATTCCATCCCCCAGCGTGCATATAGGTCATATATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS CCA 72 bp AAGTGCCTATATATGACCTATATGCACGCTGGGGGATaGAATTTGAGAAAGGCAGGTGGTGGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: KCLYMTYMHAGG*NLRKAGGGGGG
Trigger: ACCACCACCACCACCACCTGCCTTTCTCAAATTCCATCCCCCAGCGTGCATATAGGTCATATATAGGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS CCA 72 bp GTTGTGCAAGTGCCTATATATGACCTATATGCACGCTaGGGGATGGAATTTGAGAAAGGCAGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: VVQVPIYDLYAR*GMEFEKGRWWW
Trigger: CCACCACCACCTGCCTTTCTCAAATTCCATCCCCCAGCGTGCATATAGGTCATATATAGGCACTTGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS GCA 72 bp ATATCTCAAAAGCATGTCTTGGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACTGAGTGGGCCAATATC +
Preference number: 6 (lower is better)
Translates to: ISQKHVLVLVGC*TLVWLTEWANI
Trigger: GATATTGGCCCACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGCTTTTGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS GCA 72 bp GAACATGGGTTTTGCTGTCAGACAGCCTTAGGTTTGTaGCACAGCTTTGTTACTCACAAGCCATGTGACCTT +
Preference number: 6 (lower is better)
Translates to: EHGFCCQTALGL*HSFVTHKPCDL
Trigger: AAGGTCACATGGCTTGTGAGTAACAAAGCTGTGGCACAAACCTAAGGCTGTCTGACAGCAAAACCCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS CCA 72 bp GTCGTCGTCTACTTTCTGCCTTGTTTCTTTCCTCTCTaGGTCGGATTCACCTTGTTTGGCAGCAACTCAAAT +
Preference number: 6 (lower is better)
Translates to: VVVYFLPCFFPL*VGFTLFGSNSN
Trigger: ATTTGAGTTGCTGCCAAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACAAGGCAGAAAGTAGACGACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454323.1
CDS CAA 72 bp CTGCCTTGTTTCTTTCCTCTCTGGGTCGGATTCACCTaGTTTGGCAGCAACTGTTTGAATCTTGACTCTGTG +
Preference number: 6 (lower is better)
Translates to: LPCFFPLWVGFT*FGSNCLNLDSV
Trigger: CACAGAGTCAAGATTCAAACAGTTGCTGCCAAACAAGGTGAATCCGACCCAGAGAGGAAAGAAACAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS CAA 72 bp AGAGAACATGGGTTTTGCTGTCAGACAGCCTTAGGTTaGTGCCACAGCTTTGTTACTCACAAGCCATGTGAC +
Preference number: 6 (lower is better)
Translates to: REHGFCCQTALG*CHSFVTHKPCD
Trigger: GTCACATGGCTTGTGAGTAACAAAGCTGTGGCACAAACCTAAGGCTGTCTGACAGCAAAACCCATGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS CAA 90 bp TATACTGGTAGAGAACATGGGTTTTGCTGTCAGACAGCCTTAGGTTaGTGCCACAGCTTTGTTACTCACAAGCCATGTGACCTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: YTGREHGFCCQTALG*CHSFVTHKPCDLEK
Trigger: TTTCTCAAGGTCACATGGCTTGTGAGTAACAAAGCTGTGGCACAAACCTAAGGCTGTCTGACAGCAAAACCCATGTTCTCTACCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS GCA 72 bp ACACCACCTAAAGATACACCAGTTGCCTGTAGATGTTaGCTGAATTCATCCATCGTTGTGTTTGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: TPPKDTPVACRC*LNSSIVVFEML
Trigger: GAGCATCTCAAACACAACGATGGATGAATTCAGGCAACATCTACAGGCAACTGGTGTATCTTTAGGTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000617432.4
CDS CAA 72 bp TCACCCGCAATAGTTTGTTTAAAGAGACGGTCATTGTaGAATGATTCCAGGAGGAAGCGATCGAACCTACTC +
Preference number: 6 (lower is better)
Translates to: SPAIVCLKRRSL*NDSRRKRSNLL
Trigger: GAGTAGGTTCGATCGCTTCCTCCTGGAATCATTCAACAATGACCGTCTCTTTAAACAAACTATTGCGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS CAA 90 bp TACTCAAAGTCACCCGCAATAGTTTGTTTAAAGAGACGGTCATTGTaGAATGATTCCAGGAGGAAGCGATCGAACCTACTCTTCAGATCC +
Preference number: 6 (lower is better)
Translates to: YSKSPAIVCLKRRSL*NDSRRKRSNLLFRS
Trigger: GGATCTGAAGAGTAGGTTCGATCGCTTCCTCCTGGAATCATTCAACAATGACCGTCTCTTTAAACAAACTATTGCGGGTGACTTTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS TCA 72 bp GCATCATTCTTACATTCTCATTTAGTGCATCATGAATaGGGGGTTGGAGTGGAATTCTATTCCGTAGAGGGC +
Preference number: 6 (lower is better)
Translates to: ASFLHSHLVHHE*GVGVEFYSVEG
Trigger: GCCCTCTACGGAATAGAATTCCACTCCAACCCCTCATTCATGATGCACTAAATGAGAATGTAAGAATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481135.1
CDS CAA 72 bp AAGTCACCCGCAATAGTTTGTTTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGGAAGCGATCGAACCTA +
Preference number: 6 (lower is better)
Translates to: KSPAIVCLKRRS*LNDSRRKRSNL
Trigger: TAGGTTCGATCGCTTCCTCCTGGAATCATTCAACAATGACCGTCTCTTTAAACAAACTATTGCGGGTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS CAA 72 bp TGTGCCACAGCTTTGTTACTCACAAGCCATGTGACCTaGAGAAAATTAAGTCCTGGGTTCAATAACAGCATC +
Preference number: 6 (lower is better)
Translates to: CATALLLTSHVT*RKLSPGFNNSI
Trigger: GATGCTGTTATTGAACCCAGGACTTAATTTTCTCAAGGTCACATGGCTTGTGAGTAACAAAGCTGTGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS TCA 72 bp TTCCCTTTCAACCACCTTTACAATTGGTTCTTCCGTTaGTTTGTCAAGGCAGTGCATCACTCGTTCTATTTC +
Preference number: 6 (lower is better)
Translates to: FPFNHLYNWFFR*FVKAVHHSFYF
Trigger: GAAATAGAACGAGTGATGCACTGCCTTGACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTGAAAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS GCA 72 bp AATATGGTCATCTGGAAAGTGGAAACTTGCAATATGTaGTTCCGTGTATTAGAGCCAGTTACTTGTGCACCT +
Preference number: 6 (lower is better)
Translates to: NMVIWKVETCNM*FRVLEPVTCAP
Trigger: AGGTGCACAAGTAACTGGCTCTAATACACGGAAGCACATATTGCAAGTTTCCACTTTCCAGATGACCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000487558.1
ENST00000617432.4
CDS GCA 72 bp GATTTAACACAGCCCAGAGCACAGTATAATCCCTCATaGATCAACAAAGGAAAGTGCCCAATGATAGAATCT +
Preference number: 6 (lower is better)
Translates to: DLTQPRAQYNPS*INKGKCPMIES
Trigger: AGATTCTATCATTGGGCACTTTCCTTTGTTGATGCATGAGGGATTATACTGTGCTCTGGGCTGTGTTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS CAA 72 bp GTTCCCTTTCAACCACCTTTACAATTGGTTCTTCCGTaGATTTGTCAAGGCAGTGCATCACTCGTTCTATTT +
Preference number: 6 (lower is better)
Translates to: VPFQPPLQLVLP*ICQGSASLVLF
Trigger: AAATAGAACGAGTGATGCACTGCCTTGACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTGAAAGGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS CAA 90 bp AAATACTCAAAGTCACCCGCAATAGTTTGTTTAAAGAGACGGTCATaGTTGAATGATTCCAGGAGGAAGCGATCGAACCTACTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: KYSKSPAIVCLKRRS*LNDSRRKRSNLLFR
Trigger: TCTGAAGAGTAGGTTCGATCGCTTCCTCCTGGAATCATTCAACAATGACCGTCTCTTTAAACAAACTATTGCGGGTGACTTTGAGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS CAA 90 bp TGTACTAGCCCAGAATTCTCCATTTCTACTATAGTCTTCATGTGCTaGGAAATGAGTTCCCTTTCAACCACCTTTACAATTGGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: CTSPEFSISTIVFMC*EMSSLSTTFTIGSS
Trigger: GGAAGAACCAATTGTAAAGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGAAGACTATAGTAGAAATGGAGAATTCTGGGCTAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS TCA 72 bp GCTGTTTACATATTTTTCATCCATGGTCATCAAGCCTaGAACAGAACTCCTCATCTTTTCCCTCAGTTGGTT +
Preference number: 6 (lower is better)
Translates to: AVYIFFIHGHQA*NRTPHLFPQLV
Trigger: AACCAACTGAGGGAAAAGATGAGGAGTTCTGTTTCAGGCTTGATGACCATGGATGAAAAATATGTAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546102.1
CDS CAA 72 bp CTTTCAACCACCTTTACAATTGGTTCTTCCGTTGATTaGTCAAGGCAGTGCATCACTCGTTCTATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LSTTFTIGSSVD*SRQCITRSISS
Trigger: TGAAGAAATAGAACGAGTGATGCACTGCCTTGACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000541548.5
CDS TCA 72 bp CATCAACAAAGGAAAGTGCCCAATGATAGAATCTCTTaGACGCTCATCGACAGTCATCAAATAAATGTCAGA +
Preference number: 6 (lower is better)
Translates to: HQQRKVPNDRIS*TLIDSHQINVR
Trigger: TCTGACATTTATTTGATGACTGTCGATGAGCGTTCAAGAGATTCTATCATTGGGCACTTTCCTTTGTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409777.5
CDS TCA 72 bp AGTAGCATCATTCTTACATTCTCATTTAGTGCATCATaGATGAGGGGTTGGAGTGGAATTCTATTCCGTAGA +
Preference number: 6 (lower is better)
Translates to: SSIILTFSFSAS*MRGWSGILFRR
Trigger: TCTACGGAATAGAATTCCACTCCAACCCCTCATTCATGATGCACTAAATGAGAATGTAAGAATGATGCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481135.1
CDS TCA 72 bp CTAACTCAAAATGTAGCTGTAATCTCTAAGGCTTTATaGGGAGACAAGAGTATGTACTGCCAAGATTCAGTC +
Preference number: 6 (lower is better)
Translates to: LTQNVAVISKAL*GDKSMYCQDSV
Trigger: GACTGAATCTTGGCAGTACATACTCTTGTCTCCTCATAAAGCCTTAGAGATTACAGCTACATTTTGAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497715.1
CDS GCA 72 bp AAGAGCATTAATATGGTCATCTGGAAAGTGGAAACTTaGAATATGTGCTTCCGTGTATTAGAGCCAGTTACT +
Preference number: 6 (lower is better)
Translates to: KSINMVIWKVET*NMCFRVLEPVT
Trigger: AGTAACTGGCTCTAATACACGGAAGCACATATTGCAAGTTTCCACTTTCCAGATGACCATATTAATGCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000451538.1
ENST00000487558.1
ENST00000617432.4
CDS CAA 90 bp ATGAGTTCCCTTTCAACCACCTTTACAATTGGTTCTTCCGTTGATTaGTCAAGGCAGTGCATCACTCGTTCTATTTCTTCATTAATTCTA +
Preference number: 6 (lower is better)
Translates to: MSSLSTTFTIGSSVD*SRQCITRSISSLIL
Trigger: TAGAATTAATGAAGAAATAGAACGAGTGATGCACTGCCTTGACAAATCAACGGAAGAACCAATTGTAAAGGTGGTTGAAAGGGAACTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS CAA 72 bp CCAGAATTCTCCATTTCTACTATAGTCTTCATGTGCTaGGAAATGAGTTCCCTTTCAACCACCTTTACAATT +
Preference number: 6 (lower is better)
Translates to: PEFSISTIVFMC*EMSSLSTTFTI
Trigger: AATTGTAAAGGTGGTTGAAAGGGAACTCATTTCCAAGCACATGAAGACTATAGTAGAAATGGAGAATTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
CDS CAA 90 bp TCATCAATAAATAATGAGAGGTATTCAGGAGACCTGGAGTTGAGGTaGAGAAAATACTCAAAGTCACCCGCAATAGTTTGTTTAAAGAGA +
Preference number: 6 (lower is better)
Translates to: SSINNERYSGDLELR*RKYSKSPAIVCLKR
Trigger: TCTCTTTAAACAAACTATTGCGGGTGACTTTGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGAATACCTCTCATTATTTATTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS CAA 90 bp AGCTTATCATCAATAAATAATGAGAGGTATTCAGGAGACCTGGAGTaGAGGTTGAGAAAATACTCAAAGTCACCCGCAATAGTTTGTTTA +
Preference number: 6 (lower is better)
Translates to: SLSSINNERYSGDLE*RLRKYSKSPAIVCL
Trigger: TAAACAAACTATTGCGGGTGACTTTGAGTATTTTCTCAACCTCAACTCCAGGTCTCCTGAATACCTCTCATTATTTATTGATGATAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000484081.1
CDS TCA 72 bp ATATCCCTAAACATTCCTTCCAGTTTTGACGTGAACTaGCATCCACATTCAGTCTTTAACTTAGATATCATG +
Preference number: 6 (lower is better)
Translates to: ISLNIPSSFDVN*HPHSVFNLDIM
Trigger: CATGATATCTAAGTTAAAGACTGAATGTGGATGTCAGTTCACGTCAAAACTGGAAGGAATGTTTAGGGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264414.9
ENST00000344951.8
ENST00000409096.5
ENST00000409777.5
ENST00000481135.1
ENST00000617432.4