RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTXND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000259417

Ensembl transcript IDs: ENST00000560778.3

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTaGGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCGAGGG +
Preference number: 1 (lower is better)
Translates to: PGSWSRALFPWLVHG*DTHGTRAFHAGARG
Trigger: CCCTCGAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GCCTCTGTGGGATGGCAGGCTGGCAGGGAACACACGGATGCATCCTaGGGCACAGCCACCCACAGAGCGCCAGGTCCAGTCCCCACAGCC +
Preference number: 1 (lower is better)
Translates to: ASVGWQAGREHTDAS*GTATHRAPGPVPTA
Trigger: GGCTGTGGGGACTGGACCTGGCGCTCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GCCTCCTGGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATaGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCG +
Preference number: 1 (lower is better)
Translates to: ASWVLVQGSFPLAGP*LRHPRHPGIPRWCS
Trigger: CGAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCCAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp ATTCCTTGCCTCTGTGGGATGGCAGGCTGGCAGGGAACACACGGATaGATCCTGGGGCACAGCCACCCACAGAGCGCCAGGTCCAGTCCC +
Preference number: 1 (lower is better)
Translates to: IPCLCGMAGWQGTHG*ILGHSHPQSARSSP
Trigger: GGGACTGGACCTGGCGCTCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp CCCTGGGTGGCCAGATTCATTCCTTGCCTCTGTGGGATGGCAGGCTaGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAG +
Preference number: 1 (lower is better)
Translates to: PWVARFIPCLCGMAG*QGTHGCILGHSHPQ
Trigger: CTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GAGGGAGGGCTGAGAGGGCTAAGCTGCACCTTCTGTTTCCCTGGGTaGCCAGATTCATTCCTTGCCTCTGTGGGATGGCAGGCTGGCAGG +
Preference number: 1 (lower is better)
Translates to: EGGLRGLSCTFCFPG*PDSFLASVGWQAGR
Trigger: CCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAGCCCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GCTCGAGGGAGGGCTGAGAGGGCTAAGCTGCACCTTCTGTTTCCCTaGGTGGCCAGATTCATTCCTTGCCTCTGTGGGATGGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: ARGRAERAKLHLLFP*VARFIPCLCGMAGW
Trigger: CCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAGCCCTCCCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GGGCATTCCACGCTGGTGCTCGAGGGAGGGCTGAGAGGGCTAAGCTaGACCTTCTGTTTCCCTGGGTGGCCAGATTCATTCCTTGCCTCT +
Preference number: 1 (lower is better)
Translates to: GHSTLVLEGGLRGLS*TFCFPGWPDSFLAS
Trigger: AGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAGCCCTCCCTCGAGCACCAGCGTGGAATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp TTCTGTTTCCCTGGGTGGCCAGATTCATTCCTTGCCTCTGTGGGATaGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCC +
Preference number: 1 (lower is better)
Translates to: FCFPGWPDSFLASVG*QAGREHTDASWGTA
Trigger: GGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GCTAAGCTGCACCTTCTGTTTCCCTGGGTGGCCAGATTCATTCCTTaGCTCTGTGGGATGGCAGGCTGGCAGGGAACACACGGATGCATC +
Preference number: 1 (lower is better)
Translates to: AKLHLLFPWVARFIP*LCGMAGWQGTHGCI
Trigger: GATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTGCAGCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TCCCCCAGCTCTCTTCCTACTGAGCTGCAGTGGGTGCAGGAGTTTTaGTCCTCTAGCTGTGGCCAGGGCTTCCATTGGGTGACTCCTTCT +
Preference number: 1 (lower is better)
Translates to: SPSSLPTELQWVQEF*SSSCGQGFHWVTPS
Trigger: AGAAGGAGTCACCCAATGGAAGCCCTGGCCACAGCTAGAGGATCAAAACTCCTGCACCCACTGCAGCTCAGTAGGAAGAGAGCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp CCAGAAAGTAGAGGGGCTATGGAATGGGTGGTGGGAGAACAAGACTaGAGTTACCACTCTGGGCCTCATGACCAGCCACAGAAGGGGGCA +
Preference number: 1 (lower is better)
Translates to: PESRGAMEWVVGEQD*SYHSGPHDQPQKGA
Trigger: TGCCCCCTTCTGTGGCTGGTCATGAGGCCCAGAGTGGTAACTGCAGTCTTGTTCTCCCACCACCCATTCCATAGCCCCTCTACTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp ATGGGTGGTGGGAGAACAAGACTGCAGTTACCACTCTGGGCCTCATaGCCAGCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAA +
Preference number: 1 (lower is better)
Translates to: MGGGRTRLQLPLWAS*PATEGGTSSCALQE
Trigger: TTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGCTGGTCATGAGGCCCAGAGTGGTAACTGCAGTCTTGTTCTCCCACCACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp AGGGGGCTGGGGTTCAGGTGGGACCTCTTGGTTGGGAGCCTCCATTaGTACTTTGCATTTAAAGGACCGAGAGTCTCCTCAAGACAAGAC +
Preference number: 1 (lower is better)
Translates to: RGLGFRWDLLVGSLH*YFAFKGPRVSSRQD
Trigger: GTCTTGTCTTGAGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGAACCCCAGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp CAACAGCTAAGGGACTGCCAGAAAGTAGAGGGGCTATGGAATGGGTaGTGGGAGAACAAGACTGCAGTTACCACTCTGGGCCTCATGACC +
Preference number: 1 (lower is better)
Translates to: QQLRDCQKVEGLWNG*WENKTAVTTLGLMT
Trigger: GGTCATGAGGCCCAGAGTGGTAACTGCAGTCTTGTTCTCCCACCACCCATTCCATAGCCCCTCTACTTTCTGGCAGTCCCTTAGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TGCAGGAGTTTTGATCCTCTAGCTGTGGCCAGGGCTTCCATTGGGTaGCTCCTTCTCCATGGCTATAGCTCTCCCTGGGTTCTAGATCCT +
Preference number: 1 (lower is better)
Translates to: CRSFDPLAVARASIG*LLLHGYSSPWVLDP
Trigger: AGGATCTAGAACCCAGGGAGAGCTATAGCCATGGAGAAGGAGTCACCCAATGGAAGCCCTGGCCACAGCTAGAGGATCAAAACTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp AGGACCGAGAGTCTCCTCAAGACAAGACCACTGTTATGTGATGGATaGGGGGTGTCTGTTGCTGGATCCAGTTCCAAAAGGTGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: RTESLLKTRPLLCDG*GVSVAGSSSKRCPG
Trigger: TCCTGGGCACCTTTTGGAACTGGATCCAGCAACAGACACCCCCCATCCATCACATAACAGTGGTCTTGTCTTGAGGAGACTCTCGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GTAGTGATAGTGCTTTGGAACCCATTTTCCAGGTGGCCTGGGCTGTaGTGGGGACTAATGGCTGGGAGGCAGGCAATGAGAAAGAAGTCT +
Preference number: 1 (lower is better)
Translates to: VVIVLWNPFSRWPGL*WGLMAGRQAMRKKS
Trigger: AGACTTCTTTCTCATTGCCTGCCTCCCAGCCATTAGTCCCCACCACAGCCCAGGCCACCTGGAAAATGGGTTCCAAAGCACTATCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TCTTTGCTGATGACCATCAAGCTCATAAGTAAGGGCTGGTGTGCCTaGGGCTGTGTGTCCCTCTGGACACAGGCAACCTGTCTTTGTGCT +
Preference number: 1 (lower is better)
Translates to: SLLMTIKLISKGWCA*GCVSLWTQATCLCA
Trigger: AGCACAAAGACAGGTTGCCTGTGTCCAGAGGGACACACAGCCTCAGGCACACCAGCCCTTACTTATGAGCTTGATGGTCATCAGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp AGTGACCCACCACCGAGGTGTCTTCATTGTCCCAAAGACCACTGCTaGAGAGTGGTGGATCATTTATCAGACTTTAGAGAGGGCTTGGGG +
Preference number: 1 (lower is better)
Translates to: SDPPPRCLHCPKDHC*RVVDHLSDFREGLG
Trigger: CCCCAAGCCCTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACCTCGGTGGTGGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp CACCACCGAGGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTaGTGGATCATTTATCAGACTTTAGAGAGGGCTTGGGGCAACATG +
Preference number: 1 (lower is better)
Translates to: HHRGVFIVPKTTAAE*WIIYQTLERAWGNM
Trigger: CATGTTGCCCCAAGCCCTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACCTCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp AAAATTCTCCAACAGCTAAGGGACTGCCAGAAAGTAGAGGGGCTATaGAATGGGTGGTGGGAGAACAAGACTGCAGTTACCACTCTGGGC +
Preference number: 1 (lower is better)
Translates to: KILQQLRDCQKVEGL*NGWWENKTAVTTLG
Trigger: GCCCAGAGTGGTAACTGCAGTCTTGTTCTCCCACCACCCATTCCATAGCCCCTCTACTTTCTGGCAGTCCCTTAGCTGTTGGAGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp TTTTGCTTTAGATCCTCCCCATCATACAGGGCCTTCCCTGCATCTTaGTTCACTGCCTTTGCCAGCTGTCCCTTCGTGCATTCCACAATA +
Preference number: 1 (lower is better)
Translates to: FCFRSSPSYRAFPAS*FTAFASCPFVHSTI
Trigger: TATTGTGGAATGCACGAAGGGACAGCTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGCCCTGTATGATGGGGAGGATCTAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp CACCGAGGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTaGATCATTTATCAGACTTTAGAGAGGGCTTGGGGCAACATGAAG +
Preference number: 1 (lower is better)
Translates to: HRGVFIVPKTTAAEW*IIYQTLERAWGNMK
Trigger: CTTCATGTTGCCCCAAGCCCTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACCTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GTATTGCAGAGGCTGTTTGTCCTTCAACCACAGTTTAAGTTGCACTaGCCTGGAGCACCCTCTTTTTCACCCCTGAGGGTTCTAAAGTGT +
Preference number: 1 (lower is better)
Translates to: VLQRLFVLQPQFKLH*PGAPSFSPLRVLKC
Trigger: ACACTTTAGAACCCTCAGGGGTGAAAAAGAGGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTTGAAGGACAAACAGCCTCTGCAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp TGGAGAGTTCCTCTCCAGCCTGTGTTCTCCTTAAGTCCTGGGTTGTaGCTACCTTCACAGGCCTCCCATTCTCTAAATGCTTTTCATTTC +
Preference number: 1 (lower is better)
Translates to: WRVPLQPVFSLSPGL*LPSQASHSLNAFHF
Trigger: GAAATGAAAAGCATTTAGAGAATGGGAGGCCTGTGAAGGTAGCCACAACCCAGGACTTAAGGAGAACACAGGCTGGAGAGGAACTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp CTTGGTACTCCCTGTATCCCTTGTCCTCATTCTGTAAGCCTGAGGTaGGGGCATGAAATTAGATTTCTAACAAGCTCCCCAGAGATGCCA +
Preference number: 1 (lower is better)
Translates to: LGTPCIPCPHSVSLR*GHEIRFLTSSPEMP
Trigger: TGGCATCTCTGGGGAGCTTGTTAGAAATCTAATTTCATGCCCCCACCTCAGGCTTACAGAATGAGGACAAGGGATACAGGGAGTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp GCATTAATCCATTCACTCCGCCCTCATGGCCTAATCACCTCTCATTaGGCCCCAGATCTCAACACTGTTGCAATGGGAATCAAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: ALIHSLRPHGLITSH*APDLNTVAMGIKFP
Trigger: TGGAAACTTGATTCCCATTGCAACAGTGTTGAGATCTGGGGCCCAATGAGAGGTGATTAGGCCATGAGGGCGGAGTGAATGGATTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TCACAACAACCTTGCGAGGTAGATGTTATTCCCTCACTTTACAGGTaGGGAAATTGGGGCTCAGAGAGGCTGAGTGAGTTATTTGGGGTC +
Preference number: 1 (lower is better)
Translates to: SQQPCEVDVIPSLYR*GNWGSERLSELFGV
Trigger: GACCCCAAATAACTCACTCAGCCTCTCTGAGCCCCAATTTCCTCACCTGTAAAGTGAGGGAATAACATCTACCTCGCAAGGTTGTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TCTATCCACAACCCCAAAGTTCATCTTAGCTTGCCAGAAACGAGTTaGGACGCTCTGATCACAAAGGACCATCTCCTCTATGCTTCAGCA +
Preference number: 1 (lower is better)
Translates to: SIHNPKVHLSLPETS*DALITKDHLLYASA
Trigger: TGCTGAAGCATAGAGGAGATGGTCCTTTGTGATCAGAGCGTCTCAACTCGTTTCTGGCAAGCTAAGATGAACTTTGGGGTTGTGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GGTGAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATaGGAGACTAGAACCCAGGTCTCCCCATTCAATATTCATCTCATG +
Preference number: 1 (lower is better)
Translates to: GEVTCSRSHCNLTGK*ETRTQVSPFNIHLM
Trigger: CATGAGATGAATATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp AGAAACGAGTTGAGACGCTCTGATCACAAAGGACCATCTCCTCTATaGTTCAGCAGCATAATGCAACAACTGAAGCCTGAGATTCCAGTT +
Preference number: 1 (lower is better)
Translates to: RNELRRSDHKGPSPL*FSSIMQQLKPEIPV
Trigger: AACTGGAATCTCAGGCTTCAGTTGTTGCATTATGCTGCTGAAGCATAGAGGAGATGGTCCTTTGTGATCAGAGCGTCTCAACTCGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 90 bp TGGGATGCCCTTCGGTCACTAAAACTGGCAGCTAAGAAGAGTGTTTaGTGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAA +
Preference number: 1 (lower is better)
Translates to: WDALRSLKLAAKKSV*CNGEVFLLSYEAIQ
Trigger: TTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCTTAGCTGCCAGTTTTAGTGACCGAAGGGCATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 90 bp TATGTTGAAATATTGGCAGAGAAAGAGATCACTGCACTGTCAGGATaGTTAACCCCAATATCCAAGGGAAAGTGGGGTTTCTGCTACACA +
Preference number: 1 (lower is better)
Translates to: YVEILAEKEITALSG*LTPISKGKWGFCYT
Trigger: TGTGTAGCAGAAACCCCACTTTCCCTTGGATATTGGGGTTAACCATCCTGACAGTGCAGTGATCTCTTTCTCTGCCAATATTTCAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GGCTTGGGTTGGGAGTGCTTTTTATATTTTCCACCCTTCCTGAAATaGTACTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGG +
Preference number: 1 (lower is better)
Translates to: GLGWECFLYFPPFLK*YYFLLPSNKSQEIR
Trigger: CCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAGTAGCATTTCAGGAAGGGTGGAAAATATAAAAAGCACTCCCAACCCAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp GTAAATATTCTTTCATTAAACTGTCTTCAATCAGTGCTTCGTGTGTaGCATCTCTTTCCTGCCAAGACACTGAAAAGTCCCAAGGAGAAC +
Preference number: 1 (lower is better)
Translates to: VNILSLNCLQSVLRV*HLFPAKTLKSPKEN
Trigger: GTTCTCCTTGGGACTTTTCAGTGTCTTGGCAGGAAAGAGATGGCACACACGAAGCACTGATTGAAGACAGTTTAATGAAAGAATATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 90 bp CTTGTCTGCCAACTTCTAGCCTTCAATACTTCTGTGCATTTCTTTTaGAGATCAGTTTATCTTTCTATCCACAACCCCAAAGTTCATCTT +
Preference number: 1 (lower is better)
Translates to: LVCQLLAFNTSVHFF*RSVYLSIHNPKVHL
Trigger: AAGATGAACTTTGGGGTTGTGGATAGAAAGATAAACTGATCTGCAAAAGAAATGCACAGAAGTATTGAAGGCTAGAAGTTGGCAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp TCCTGGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTaGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: SWVLVQGSFPLAGPW*RHPRHPGIPRWCSR
Trigger: CCTCGAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCTTCTGTTTCCCTGGGTaGCCAGATTCATTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLFCFPG*PDSFLA
Trigger: GGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAA...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGGCTCAGAGAGGCTaGGTGAGTTATTTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPGAQRG*VSYLGS
Trigger: GGACCCCAAATAACTCACTCAGCCTCTCTGAGCCCC...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTGGCTGGTCCATGGTTaGGACACCCACGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRWLVHG*DTHGTR
Trigger: CCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCCCCTGGCTGGTCCATaGTTGCGACACCCACGGCAC +
Preference number: 2 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFPLAGP*LRHPRH
Trigger: GTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTACCACTGCTAGTCCATaGGGAGGGGGCTGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLTTASP*GGGWGS
Trigger: TGAACCCCAGCCCCCTCCCCATGGACTAGCAGTGGT...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp GATAACTCTGTTTGGGCACCTCTCCACAGGCTGGGCCACAGGACATaGTGGGTGGTCATTGATCATGCCTGGCAGAACCAGTCCTCAACA +
Preference number: 2 (lower is better)
Translates to: DNSVWAPLHRLGHRT*WVVIDHAWQNQSST
Trigger: TGTTGAGGACTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTGCCCAAACAGAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGAGGTGGCCTGGGCTGTaGTGGGGACTAATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRRWPGL*WGLMAG
Trigger: CCCAGCCATTAGTCCCCACCACAGCCCAGGCCACCT...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCAGGGAACACACGGATaGATCCTGGGGCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQQGTHG*ILGHSH
Trigger: GTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGCCAGATTCATTCCTTaGCTCTGTGGGATGGCAGGC +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLARFIP*LCGMAG
Trigger: GCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTCCAGTTCCAAAAGGTaGCCAGGAACCTGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPSSSKR*PGTWEG
Trigger: ACCTTCCCAGGTTCCTGGGCACCTTTTGGAACTGGA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTTGGTTCACTGCCTTTaGCAGCTGTCCCTTCGTGCA +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPLVHCL*QLSLRA
Trigger: TGCACGAAGGGACAGCTGGCAAAGGCAGTGAACCAA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTGTGGGATGGCAGGCTaGCAGGGAACACACGGATGC +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRCGMAG*QGTHGC
Trigger: GCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTAGGTGCCCAGGAACCTaGGAAGGTGACTACCCTATC +
Preference number: 2 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTRCPGT*EGDYPI
Trigger: GATAGGGTAGTCACCTTCCCAGGTTCCTGGGCACCT...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCACCTCTCCACAGGCTaGGCCACAGGACATTGTGGG +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRHLSTG*ATGHCG
Trigger: CCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGCCAGATAACTCTGTTTaGGCACCTCTCCACAGGCTG +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPPDNSV*APLHRL
Trigger: CAGCCTGTGGAGAGGTGCCCAAACAGAGTTATCTGG...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCCCACTCTGGGCCTCATaGCCAGCCACAGAAGGGGGC +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAPLWAS*PATEGG
Trigger: GCCCCCTTCTGTGGCTGGTCATGAGGCCCAGAGTGG...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGACCCAACCGATGGGATaGCCTTCGGTCACTAAAACT +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPTQPMG*PSVTKT
Trigger: AGTTTTAGTGACCGAAGGGCATCCCATCGGTTGGGT...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCATACAGGGCCTTCCCTaGATCTTGGTTCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPIQGLP*ILVHCL
Trigger: AAGGCAGTGAACCAAGATGCAGGGAAGGCCCTGTAT...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGACACACGGATGCATCCTaGGGCACAGCCACCCACAGA +
Preference number: 2 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRHTDAS*GTATHR
Trigger: TCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTG...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGCAATCTGCCTGTGTTaGCCTCCCAAAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLAICLC*PPKVLR
Trigger: TCTCAGCACTTTGGGAGGCCAACACAGGCAGATTGC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp TGGGGTTCAGGTGGGACCTCTTGGTTGGGAGCCTCCATTGCTACTTaGCATTTAAAGGACCGAGAGTCTCCTCAAGACAAGACCACTGTT +
Preference number: 2 (lower is better)
Translates to: WGSGGTSWLGASIAT*HLKDRESPQDKTTV
Trigger: AACAGTGGTCTTGTCTTGAGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTGGAGGAGGGAGGGCCTaGGAAGAGCCATCATCGATG +
Preference number: 2 (lower is better)
Translates to: SPVLSKLPGFIISILIFLGGGRA*EEPSSM
Trigger: CATCGATGATGGCTCTTCTCAGGCCCTCCCTCCTCC...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTGGTCATAGATGTAGGTaGTGGAGTGGGAGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFGHRCR*WSGSGV
Trigger: CACCCCACTCCCACTCCATCACCTACATCTATGACC...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTCTCAGAGAGGCTGAGTaGGTTATTTGGGGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTLREAE*VIWGPL
Trigger: TAGAGGACCCCAAATAACTCACTCAGCCTCTCTGAG...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGGTGCTGGGAAAGGCTaGTGTGAGTGTTCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQGAGKG*CECSSD
Trigger: GTCAGAGGAACACTCACAGCAGCCTTTCCCAGCACC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTCACCTTCTGTTTCCCTaGGTGGCCAGATTCATTCCT +
Preference number: 2 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTHLLFP*VARFIP
Trigger: AGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTG...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCCCATGGGGAGGGGGCTaGGGTTCAGGTGGGACCTCT +
Preference number: 2 (lower is better)
Translates to: LFPVAIKQESRDKVKPISPWGGG*GSGGTS
Trigger: AGAGGTCCCACCTGAACCCCAGCCCCCTCCCCATGG...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCCAAGTGGTTCCGGCTaGGAGATTTGGCCTGTAGGA +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQPSGSG*EIWPVG
Trigger: TCCTACAGGCCAAATCTCCCAGCCGGAACCACTTGG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp CCTCAAGTATTGCAGAGGCTGTTTGTCCTTCAACCACAGTTTAAGTaGCACTGCCCTGGAGCACCCTCTTTTTCACCCCTGAGGGTTCTA +
Preference number: 2 (lower is better)
Translates to: PQVLQRLFVLQPQFK*HCPGAPSFSPLRVL
Trigger: TAGAACCCTCAGGGGTGAAAAAGAGGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTTGAAGGACAAACAGCCTCTGCAATACTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATCTGAGAGGGCTAAGCTaGACCTTCTGTTTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNLRGLS*TFCFPG
Trigger: CCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAG...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTGAAGGGGAGCTCAGGTaGTCTCATTTAACTTCGTAC +
Preference number: 2 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTEGELR*SHLTSY
Trigger: GTACGAAGTTAAATGAGAGCACCTGAGCTCCCCTTC...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGAGCTTCTTCACAGCTaGAGGTCTCTTGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQELLHS*RSLGWG
Trigger: TCCCCATCCAAGAGACCTGCAGCTGTGAAGAAGCTC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCCACCCTTCCTGAAATaGTACTATTTCCTGTTGCCA +
Preference number: 2 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPPPFLK*YYFLLP
Trigger: TGGCAACAGGAAATAGTAGCATTTCAGGAAGGGTGG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACCAGCCTCCTGGGTCCTaGTCCAGGGCTCTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYQPPGS*SRALFP
Trigger: GGGGAAAAGAGCCCTGGACCAGGACCCAGGAGGCTG...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGGTGGGACCTCTTGGTTaGGAGCCTCCATTGCTACTT +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRVGPLG*EPPLLL
Trigger: AAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCAC...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAAGGGCTGGGGTTCAGGTaGGACCTCTTGGTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKGLGFR*DLLVGS
Trigger: GCTCCCAACCAAGAGGTCCCACCTGAACCCCAGCCC...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTAGAGGAATTGGGACTTaGGGCCGGTTTTGTAGGCTC +
Preference number: 2 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFRGIGT*GRFCRL
Trigger: GAGCCTACAAAACCGGCCCCAAGTCCCAATTCCTCT...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGTTCCTCTGACCAAGTaGTTCCGGCTGGGAGATTTG +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQVPLTK*FRLGDL
Trigger: CAAATCTCCCAGCCGGAACCACTTGGTCAGAGGAAC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGGTGGGGACTAATGGCTaGGAGGCAGGCAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRVGTNG*EAGNEK
Trigger: TTTCTCATTGCCTGCCTCCCAGCCATTAGTCCCCAC...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAATGGCCTGGGCTGTGGTaGGGACTAATGGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKWPGLW*GLMAGR
Trigger: CCTCCCAGCCATTAGTCCCCACCACAGCCCAGGCCA...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGTTGTTTTTGGCCAATaGAAGACCCAGACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPVVFGQ*KTQTGD
Trigger: ATCTCCTGTCTGGGTCTTCCATTGGCCAAAAACAAC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp TTTAGCTTCTGTTGTTTTTGGCCAATGGAAGACCCAGACAGGAGATaGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: FSFCCFWPMEDPDRR*EGRRQEVKVFIPPA
Trigger: AGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTCCTGTCTGGGTCTTCCATTGGCCAAAAACAACAGAAGCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTAGGAACCTGGGAAGGTaGCTACCCTATCATCTCACA +
Preference number: 2 (lower is better)
Translates to: SWLGASIATLHLKDRESPRNLGR*LPYHLT
Trigger: TGTGAGATGATAGGGTAGTCACCTTCCCAGGTTCCT...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTCTGAGATTACAGACATaGGCTACCTTGCCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLLRLQT*ATLPCH
Trigger: ATGACAAGGCAAGGTAGCTCATGTCTGTAATCTCAG...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGGAGGGATGGAATAAATaGACTCAGAGGAAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRREGWNK*TQRKGS
Trigger: GCTCCCCTTCCTCTGAGTGCATTTATTCCATCCCTC...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGGACCATCTCCTCTATaGTTCAGCAGCATAATGCAA +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLGPSPL*FSSIMQ
Trigger: TTGCATTATGCTGCTGAAGCATAGAGGAGATGGTCC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCCTTGCCTCTGTGGGATaGCAGGCTGGCAGGGAACAC +
Preference number: 2 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNILASVG*QAGREH
Trigger: GTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAG...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATGGGGGTGTCTGTTGCTaGATCCAGTTCCAAAAGGTG +
Preference number: 2 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNGGVCC*IQFQKV
Trigger: CACCTTTTGGAACTGGATCCAGCAACAGACACCCCC...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTCAGGTGGGACCTCTTaGTTGGGAGCCTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: SECGKELIRTKGFSGSASSGGTS*LGASIA
Trigger: AGCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGAATATATCAAAATGGTaGTTTCCGGGAGGTGGGATT +
Preference number: 2 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPNISKW*FPGGGI
Trigger: AATCCCACCTCCCGGAAACCACCATTTTGATATATT...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGCCTTCCCTGCATCTTaGTTCACTGCCTTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAAFPAS*FTAFAS
Trigger: GCTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTCTGTTATTAGCTGACTaGGAGTTGGTTCTAGTTTGC +
Preference number: 2 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLLLLAD*ELVLVC
Trigger: GCAAACTAGAACCAACTCCCAGTCAGCTAATAACAG...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGGCTGTGTGTCCCTCTaGACACAGGCAACCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAGCVSL*TQATCL
Trigger: AAGACAGGTTGCCTGTGTCCAGAGGGACACACAGCC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCAATATGGCTGCTGGTaGGATTTTATGTTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRQYGCW*DFMFPL
Trigger: CAGGGGAAACATAAAATCTCACCAGCAGCCATATTG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCAAGAACATTCATGTTTaGCCATGTTCTCTCATTTCG +
Preference number: 2 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPKNIHV*PCSLIS
Trigger: CGAAATGAGAGAACATGGGCAAACATGAATGTTCTT...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGAGCTTTTCACAGAAATaGCTGGCTTCTCAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQSFSQK*LASQGR
Trigger: CCTACCTTGAGAAGCCAGGCATTTCTGTGAAAAGCT...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCTGAACTCTTGGTTCTaGATATTTCTGCTACCCCAC +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRLNSWF*IFLLPH
Trigger: GTGGGGTAGCAGAAATATGCAGAACCAAGAGTTCAG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCTCGCCTAGGCTGGAGTaGAGTAGTGTGATCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKASPRLE*SSVILA
Trigger: AGCTAGGATCACACTACTGCACTCCAGCCTAGGCGA...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCCTGCCTGAAGAGCTGTaGCCTTGTCCACATTCAGGG +
Preference number: 2 (lower is better)
Translates to: LFPVAIKQESRDKVKPISLPEEL*PCPHSG
Trigger: CCCTGAATGTGGACAAGGCCACAGCTCTTCAGGCAG...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp CCCACAAACATGGCCTTTAACCAAGAAACCTTAGGTTTTGTGGGTTaGGAAATCTCTAGTGACCAAGAGGAACTGCTTCCACCAGGGAAT +
Preference number: 2 (lower is better)
Translates to: PTNMAFNQETLGFVG*EISSDQEELLPPGN
Trigger: ATTCCCTGGTGGAAGCAGTTCCTCTTGGTCACTAGAGATTTCCAAACCCACAAAACCTAAGGTTTCTTGGTTAAAGGCCATGTTTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGATTCCTGCTATCATATaGGGCGATACAACATCATGC +
Preference number: 2 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRIPAII*GDTTSC
Trigger: GCATGATGTTGTATCGCCTCATATGATAGCAGGAAT...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCTGAACCTGAGGCAATaGACAAAAGGCTTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQLNLRQ*TKGFCF
Trigger: AAAGCAAAAGCCTTTTGTGCATTGCCTCAGGTTCAG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGAAAATATATCAAAATaGTGGTTTCCGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQENISK*WFPGGG
Trigger: CCCACCTCCCGGAAACCACCATTTTGATATATTTTC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTCTTCTCCTGGGGTGGTaGATTCAAGAACATTCATGT +
Preference number: 2 (lower is better)
Translates to: SPVLSKLPGFIISILIFLLLLGW*IQEHSC
Trigger: ACATGAATGTTCTTGAATTCACCACCCCAGGAGAAG...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATATGGGGAAGTATTCCTaGTATCATATGAGGCGATAC +
Preference number: 2 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNMGKYS*YHMRRY
Trigger: GTATCGCCTCATATGATAGCAGGAATACTTCCCCAT...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTAGTTTGCATTGTAAATaGATGCTGATGAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTSLHCK*MLMSFS
Trigger: TGAAAAGCTCATCAGCATGCATTTACAATGCAAACT...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCTCTTTTGCTCCAGTGTaGTGCCTATGTGGACCGTAT +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKASFAPV*CLCGPY
Trigger: ATACGGTCCACATAGGCAGCACACTGGAGCAAAAGA...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACCTGTTATGTGATGGATaGGGGGTGTCTGTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYLLCDG*GVSVAG
Trigger: TCCAGCAACAGACACCCCCCATCCATCACATAACAG...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp CATTCATGTTTGCCCATGTTCTCTCATTTCGTCCTCACAACAACCTaGCGAGGTAGATGTTATTCCCTCACTTTACAGGTGAGGAAATTG +
Preference number: 2 (lower is better)
Translates to: HSCLPMFSHFVLTTT*RGRCYSLTLQVRKL
Trigger: CAATTTCCTCACCTGTAAAGTGAGGGAATAACATCTACCTCGCAAGGTTGTTGTGAGGACGAAATGAGAGAACATGGGCAAACATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp CTGTTAAATTGGAAGATGATCTTGTGCCATCTGGGGCTCCTTATGTaGAAATATTGGCAGAGAAAGAGATCACTGCACTGTCAGGATGGT +
Preference number: 2 (lower is better)
Translates to: LLNWKMILCHLGLLM*KYWQRKRSLHCQDG
Trigger: ACCATCCTGACAGTGCAGTGATCTCTTTCTCTGCCAATATTTCAACATAAGGAGCCCCAGATGGCACAAGATCATCTTCCAATTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATGGCGATACAACATCATaGACAGAGTATGAATTTGAC +
Preference number: 2 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNGDTTS*TEYEFD
Trigger: GTCAAATTCATACTCTGTGCATGATGTTGTATCGCC...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTATTTTCCACCCTTCCTaGAATGCTACTATTTCCTGT +
Preference number: 2 (lower is better)
Translates to: SPVLSKLPGFIISILIFLIFHPS*NATISC
Trigger: ACAGGAAATAGTAGCATTTCAGGAAGGGTGGAAAAT...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR TCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAAGAGACAGGGAGACACTaGTCTTTCAACTCGATAAGA +
Preference number: 2 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKETGRH*SFNSIR
Trigger: TCTTATCGAGTTGAAAGATCAGTGTCTCCCTGTCTC...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGGGATTCTCAGGCAGTaGTTCTTAAACTTTAACGTG +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAGILRQ*FLNFNV
Trigger: CACGTTAAAGTTTAAGAAGCACTGCCTGAGAATCCC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGTTTTCATTTCTTGTCTaGCAACTTCTAGCCTTCAAT +
Preference number: 2 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQFSFLV*QLLAFN
Trigger: ATTGAAGGCTAGAAGTTGGCAGACAAGAAATGAAAA...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCTCAATATTCATCTCATaGACTGTGCACCCCCAAAAA +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKASIFIS*TVHPQK
Trigger: TTTTTGGGGGTGCACAGTCCATGAGATGAATATTGA...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCCCTTCAATACTTCTGTaGATTTCTTTTGCAGATCAG +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAPSILL*ISFADQ
Trigger: CTGATCTGCAAAAGAAATGCACAGAAGTATTGAAGG...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCTTCTTTAGGAATCTGTaGATACTGTGGCAACTCATT +
Preference number: 2 (lower is better)
Translates to: PAILSDNFTELPGEIFKAFFRNL*ILWQLI
Trigger: AATGAGTTGCCACAGTATCCACAGATTCCTAAAGAA...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 90 bp TCTTGTCTGCCAACTTCTAGCCTTCAATACTTCTGTGCATTTCTTTaGCAGATCAGTTTATCTTTCTATCCACAACCCCAAAGTTCATCT +
Preference number: 2 (lower is better)
Translates to: SCLPTSSLQYFCAFL*QISLSFYPQPQSSS
Trigger: AGATGAACTTTGGGGTTGTGGATAGAAAGATAAACTGATCTGCAAAAGAAATGCACAGAAGTATTGAAGGCTAGAAGTTGGCAGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CTCTGTGGGATGGCAGGCTGGCAGGGAACACACGGATaGATCCTGGGGCACAGCCACCCACAGAGCGCCAGG +
Preference number: 3 (lower is better)
Translates to: LCGMAGWQGTHG*ILGHSHPQSAR
Trigger: CCTGGCGCTCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GGATGGCAGGCTGGCAGGGAACACACGGATGCATCCTaGGGCACAGCCACCCACAGAGCGCCAGGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: GWQAGREHTDAS*GTATHRAPGPV
Trigger: GACTGGACCTGGCGCTCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATaGTTGCGACACCCACGGCACCCGGGCATTCCACGC +
Preference number: 3 (lower is better)
Translates to: VLVQGSFPLAGP*LRHPRHPGIPR
Trigger: GCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTCCTGGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTaGTCCATGGTTGCGACACCCACGGCACCCGGGCAT +
Preference number: 3 (lower is better)
Translates to: LLGPGPGLFSPG*SMVATPTAPGH
Trigger: ATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp TGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTaGGACACCCACGGCACCCGGGCATTCCACGCTGGT +
Preference number: 3 (lower is better)
Translates to: WSRALFPWLVHG*DTHGTRAFHAG
Trigger: ACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CACTGCCACACCACTGCTAGTCCATGGGGAGGGGGCTaGGGTTCAGGTGGGACCTCTTGGTTGGGAGCCTCC +
Preference number: 3 (lower is better)
Translates to: HCHTTASPWGGG*GSGGTSWLGAS
Trigger: GGAGGCTCCCAACCAAGAGGTCCCACCTGAACCCCAGCCCCCTCCCCATGGACTAGCAGTGGTGTGGCAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GTGACTACCCTATCATCTCACAGGGACTCCCCACACTaGAACCCCAGCCTCCTGGGTCCTGGTCCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: VTTLSSHRDSPH*NPSLLGPGPGL
Trigger: GAGCCCTGGACCAGGACCCAGGAGGCTGGGGTTCCAGTGTGGGGAGTCCCTGTGAGATGATAGGGTAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GCCAGATTCATTCCTTGCCTCTGTGGGATGGCAGGCTaGCAGGGAACACACGGATGCATCCTGGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: ARFIPCLCGMAG*QGTHGCILGHS
Trigger: GCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CCTGGGTGGCCAGATTCATTCCTTGCCTCTGTGGGATaGCAGGCTGGCAGGGAACACACGGATGCATCCTGG +
Preference number: 3 (lower is better)
Translates to: PGWPDSFLASVG*QAGREHTDASW
Trigger: CCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ACGCTGGTGCTCGAGGGAGGGCTGAGAGGGCTAAGCTaGACCTTCTGTTTCCCTGGGTGGCCAGATTCATTC +
Preference number: 3 (lower is better)
Translates to: TLVLEGGLRGLS*TFCFPGWPDSF
Trigger: GAATGAATCTGGCCACCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAGCCCTCCCTCGAGCACCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp TGGGCACCTCTCCACAGGCTGGGCCACAGGACATTGTaGGTGGTCATTGATCATGCCTGGCAGAACCAGTCC +
Preference number: 3 (lower is better)
Translates to: WAPLHRLGHRTL*VVIDHAWQNQS
Trigger: GGACTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CACCTTCTGTTTCCCTGGGTGGCCAGATTCATTCCTTaGCTCTGTGGGATGGCAGGCTGGCAGGGAACACAC +
Preference number: 3 (lower is better)
Translates to: HLLFPWVARFIP*LCGMAGWQGTH
Trigger: GTGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GCTGGGCACATGGATGTGGACCCAGATAACTCTGTTTaGGCACCTCTCCACAGGCTGGGCCACAGGACATTG +
Preference number: 3 (lower is better)
Translates to: AGHMDVDPDNSV*APLHRLGHRTL
Trigger: CAATGTCCTGTGGCCCAGCCTGTGGAGAGGTGCCCAAACAGAGTTATCTGGGTCCACATCCATGTGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp CCACAGGCTGGGCCACAGGACATTGTGGGTGGTCATTaGTCATGCCTGGCAGAACCAGTCCTCAACAGCAAG +
Preference number: 3 (lower is better)
Translates to: PQAGPQDIVGGH*SCLAEPVLNSK
Trigger: CTTGCTGTTGAGGACTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp GGGAGAACAAGACTGCAGTTACCACTCTGGGCCTCATaGCCAGCCACAGAAGGGGGCACTAGCAGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: GRTRLQLPLWAS*PATEGGTSSCA
Trigger: AGCACAACTGCTAGTGCCCCCTTCTGTGGCTGGTCATGAGGCCCAGAGTGGTAACTGCAGTCTTGTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ACGCCATATCCCTTGAGGTCAGGTGCTGGGAAAGGCTaGTGTGAGTGTTCCTCTGACCAAGTGGTTCCGGCT +
Preference number: 3 (lower is better)
Translates to: TPYPLRSGAGKG*CECSSDQVVPA
Trigger: AGCCGGAACCACTTGGTCAGAGGAACACTCACAGCAGCCTTTCCCAGCACCTGACCTCAAGGGATATGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ATTCCCCCAGCTCTCTTCCTACTGAGCTGCAGTGGGTaGAGGAGTTTTGATCCTCTAGCTGTGGCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: IPPALFLLSCSG*RSFDPLAVARA
Trigger: AGCCCTGGCCACAGCTAGAGGATCAAAACTCCTGCACCCACTGCAGCTCAGTAGGAAGAGAGCTGGGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTTTGGAACCCATTTTCCAGGTGGCCTGGGCTGTGGTaGGGACTAATGGCTGGGAGGCAGGCAATGAGAAAG +
Preference number: 3 (lower is better)
Translates to: LWNPFSRWPGLW*GLMAGRQAMRK
Trigger: CTTTCTCATTGCCTGCCTCCCAGCCATTAGTCCCCACCACAGCCCAGGCCACCTGGAAAATGGGTTCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GGCCACAGGACATTGTGGGTGGTCATTGATCATGCCTaGCAGAACCAGTCCTCAACAGCAAGACCTAGGGGG +
Preference number: 3 (lower is better)
Translates to: GHRTLWVVIDHA*QNQSSTARPRG
Trigger: CCCCCTAGGTCTTGCTGTTGAGGACTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CACCTCTCCACAGGCTGGGCCACAGGACATTGTGGGTaGTCATTGATCATGCCTGGCAGAACCAGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: HLSTGWATGHCG*SLIMPGRTSPQ
Trigger: TTGAGGACTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGCCAGATTCATTCCTaGCCTCTGTGGGATGGCAGG +
Preference number: 3 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPGQIHS*PLWDGR
Trigger: CCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp TCTCTTCCTACTGAGCTGCAGTGGGTGCAGGAGTTTTaGTCCTCTAGCTGTGGCCAGGGCTTCCATTGGGTG +
Preference number: 3 (lower is better)
Translates to: SLPTELQWVQEF*SSSCGQGFHWV
Trigger: CACCCAATGGAAGCCCTGGCCACAGCTAGAGGATCAAAACTCCTGCACCCACTGCAGCTCAGTAGGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTAGTAGTGATAGTGCTTTGGAACCCATTTTCCAGGTaGCCTGGGCTGTGGTGGGGACTAATGGCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LVVIVLWNPFSR*PGLWWGLMAGR
Trigger: CCTCCCAGCCATTAGTCCCCACCACAGCCCAGGCCACCTGGAAAATGGGTTCCAAAGCACTATCACTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGGTGGGACCTCTTGGTaGGGAGCCTCCATTGCTACT +
Preference number: 3 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLGGTSW*GASIAT
Trigger: AGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTGGCCTTCCCTGCATCTaGGTTCACTGCCTTTGCCAG +
Preference number: 3 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTGLPCI*VHCLCQ
Trigger: CTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGCC...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp ATGACCATCAAGCTCATAAGTAAGGGCTGGTGTGCCTaGGGCTGTGTGTCCCTCTGGACACAGGCAACCTGT +
Preference number: 3 (lower is better)
Translates to: MTIKLISKGWCA*GCVSLWTQATC
Trigger: ACAGGTTGCCTGTGTCCAGAGGGACACACAGCCTCAGGCACACCAGCCCTTACTTATGAGCTTGATGGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp TTTGATCCTCTAGCTGTGGCCAGGGCTTCCATTGGGTaGCTCCTTCTCCATGGCTATAGCTCTCCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: FDPLAVARASIG*LLLHGYSSPWV
Trigger: AACCCAGGGAGAGCTATAGCCATGGAGAAGGAGTCACCCAATGGAAGCCCTGGCCACAGCTAGAGGATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CCCATCATACAGGGCCTTCCCTGCATCTTGGTTCACTaGCTTTGCCAGCTGTCCCTTCGTGCATTCCACAAT +
Preference number: 3 (lower is better)
Translates to: PIIQGLPCILVH*LCQLSLRAFHN
Trigger: ATTGTGGAATGCACGAAGGGACAGCTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGCCCTGTATGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GTTGCTGGATCCAGTTCCAAAAGGTGCCCAGGAACCTaGGAAGGTGACTACCCTATCATCTCACAGGGACTC +
Preference number: 3 (lower is better)
Translates to: VAGSSSKRCPGT*EGDYPIISQGL
Trigger: GAGTCCCTGTGAGATGATAGGGTAGTCACCTTCCCAGGTTCCTGGGCACCTTTTGGAACTGGATCCAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp TGCAGGTCTCTTGGATGGGGATGGAAGGCCACAGCTTaGAGGGATGGAATAAATGCACTCAGAGGAAGGGGA +
Preference number: 3 (lower is better)
Translates to: CRSLGWGWKATA*RDGINALRGRG
Trigger: TCCCCTTCCTCTGAGTGCATTTATTCCATCCCTCCAAGCTGTGGCCTTCCATCCCCATCCAAGAGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp TCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTaGAACCCATTTTCCAGGTGGCCTGGGCTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: STFRGHLVVIVL*NPFSRWPGLWW
Trigger: CCACCACAGCCCAGGCCACCTGGAAAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GAGAGTTCCTCTCCAGCCTGTGTTCTCCTTAAGTCCTaGGTTGTGGCTACCTTCACAGGCCTCCCATTCTCT +
Preference number: 3 (lower is better)
Translates to: ESSSPACVLLKS*VVATFTGLPFS
Trigger: AGAGAATGGGAGGCCTGTGAAGGTAGCCACAACCCAGGACTTAAGGAGAACACAGGCTGGAGAGGAACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp ACCCAGATAACTCTGTTTGGGCACCTCTCCACAGGCTaGGCCACAGGACATTGTGGGTGGTCATTGATCATG +
Preference number: 3 (lower is better)
Translates to: TQITLFGHLSTG*ATGHCGWSLIM
Trigger: CATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTGCCCAAACAGAGTTATCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGCTGGGCCACAGGACATaGTGGGTGGTCATTGATCAT +
Preference number: 3 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPLGHRT*WVVIDH
Trigger: ATGATCAATGACCACCCACAATGTCCTGTGGCCCAG...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp GGGTTCAGGTGGGACCTCTTGGTTGGGAGCCTCCATTaGTACTTTGCATTTAAAGGACCGAGAGTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: GFRWDLLVGSLH*YFAFKGPRVSS
Trigger: TGAGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp AGTCTTGAGCTTCTTCACAGCTGCAGGTCTCTTGGATaGGGATGGAAGGCCACAGCTTGGAGGGATGGAATA +
Preference number: 3 (lower is better)
Translates to: SLELLHSCRSLG*GWKATAWRDGI
Trigger: TATTCCATCCCTCCAAGCTGTGGCCTTCCATCCCCATCCAAGAGACCTGCAGCTGTGAAGAAGCTCAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CCTCTCCAGCCTGTGTTCTCCTTAAGTCCTGGGTTGTaGCTACCTTCACAGGCCTCCCATTCTCTAAATGCT +
Preference number: 3 (lower is better)
Translates to: PLQPVFSLSPGL*LPSQASHSLNA
Trigger: AGCATTTAGAGAATGGGAGGCCTGTGAAGGTAGCCACAACCCAGGACTTAAGGAGAACACAGGCTGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GCTAAGGGACTGCCAGAAAGTAGAGGGGCTATGGAATaGGTGGTGGGAGAACAAGACTGCAGTTACCACTCT +
Preference number: 3 (lower is better)
Translates to: AKGLPESRGAME*VVGEQDCSYHS
Trigger: AGAGTGGTAACTGCAGTCTTGTTCTCCCACCACCCATTCCATAGCCCCTCTACTTTCTGGCAGTCCCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CATTCACTCCGCCCTCATGGCCTAATCACCTCTCATTaGGCCCCAGATCTCAACACTGTTGCAATGGGAATC +
Preference number: 3 (lower is better)
Translates to: HSLRPHGLITSH*APDLNTVAMGI
Trigger: GATTCCCATTGCAACAGTGTTGAGATCTGGGGCCCAATGAGAGGTGATTAGGCCATGAGGGCGGAGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCCTGGCTGGTCCATGGTaGCGACACCCACGGCACCCG +
Preference number: 3 (lower is better)
Translates to: LFPVAIKQESRDKVKPISLAGPW*RHPRHP
Trigger: CGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAG...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGACAGCTGCAGGTCTCTaGGATGGGGATGGAAGGCCA +
Preference number: 3 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRTAAGL*DGDGRP
Trigger: TGGCCTTCCATCCCCATCCAAGAGACCTGCAGCTGT...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp GGACTGTTGGCCCCTTCCAGATTGTATTTCCCTAAGTaGCCCACCACCGAGGTGTCTTCATTGTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: GLLAPSRLYFPK*PTTEVSSLSQR
Trigger: TCTTTGGGACAATGAAGACACCTCGGTGGTGGGTCACTTAGGGAAATACAATCTGGAAGGGGCCAACAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp AGGCTGTTTGTCCTTCAACCACAGTTTAAGTTGCACTaGCCTGGAGCACCCTCTTTTTCACCCCTGAGGGTT +
Preference number: 3 (lower is better)
Translates to: RLFVLQPQFKLH*PGAPSFSPLRV
Trigger: AACCCTCAGGGGTGAAAAAGAGGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTTGAAGGACAAACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTTCCGGCTGGGAGATTaGGCCTGTAGGAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: SECGKELIRTKGFSGSASFRLGD*ACRKQP
Trigger: GGGCTGCTTCCTACAGGCCAAATCTCCCAGCCGGAA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp AAGGTATTTATTCCCCCAGCTCTCTTCCTACTGAGCTaGAGTGGGTGCAGGAGTTTTGATCCTCTAGCTGTG +
Preference number: 3 (lower is better)
Translates to: KVFIPPALFLLS*SGCRSFDPLAV
Trigger: CACAGCTAGAGGATCAAAACTCCTGCACCCACTGCAGCTCAGTAGGAAGAGAGCTGGGGGAATAAATACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp AGTCTCCTCAAGACAAGACCACTGTTATGTGATGGATaGGGGGTGTCTGTTGCTGGATCCAGTTCCAAAAGG +
Preference number: 3 (lower is better)
Translates to: SLLKTRPLLCDG*GVSVAGSSSKR
Trigger: CCTTTTGGAACTGGATCCAGCAACAGACACCCCCCATCCATCACATAACAGTGGTCTTGTCTTGAGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTaGATCATTTATCAGACTTTAGAGAGGGCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: VFIVPKTTAAEW*IIYQTLERAWG
Trigger: GCCCCAAGCCCTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ACAAGCAACAACTTAAAACTGGCCACTAGGCACCATTaGCTGGAAAACCCACCACCCATTCTCTGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: TSNNLKLATRHH*LENPPPILCFG
Trigger: TCCAAAGCAGAGAATGGGTGGTGGGTTTTCCAGGCAATGGTGCCTAGTGGCCAGTTTTAAGTTGTTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CCACCGAGGTGTCTTCATTGTCCCAAAGACCACTGCTaGAGAGTGGTGGATCATTTATCAGACTTTAGAGAG +
Preference number: 3 (lower is better)
Translates to: PPRCLHCPKDHC*RVVDHLSDFRE
Trigger: CTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACCTCGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CCACCACCGAGGTGTCTTCATTGTCCCAAAGACCACTaGTGCAGAGTGGTGGATCATTTATCAGACTTTAGA +
Preference number: 3 (lower is better)
Translates to: PPPRCLHCPKDH*CRVVDHLSDFR
Trigger: TCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACCTCGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ATTCCACCAGATAAAATTCTCCAACAGCTAAGGGACTaGCAGAAAGTAGAGGGGCTATGGAATGGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: IPPDKILQQLRD*QKVEGLWNGWW
Trigger: CCACCACCCATTCCATAGCCCCTCTACTTTCTGGCAGTCCCTTAGCTGTTGGAGAATTTTATCTGGTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTaGTGGATCATTTATCAGACTTTAGAGAGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: GVFIVPKTTAAE*WIIYQTLERAW
Trigger: CCAAGCCCTCTCTAAAGTCTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTTGGTTCTGCATATTTCTGCTACCCCACTTGTCTCTaGGACTGTTGGCCCCTTCCAGATTGTATTTCCCTA +
Preference number: 3 (lower is better)
Translates to: LGSAYFCYPTCL*DCWPLPDCISL
Trigger: TAGGGAAATACAATCTGGAAGGGGCCAACAGTCCCAGAGACAAGTGGGGTAGCAGAAATATGCAGAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CCCTGTATCCCTTGTCCTCATTCTGTAAGCCTGAGGTaGGGGCATGAAATTAGATTTCTAACAAGCTCCCCA +
Preference number: 3 (lower is better)
Translates to: PCIPCPHSVSLR*GHEIRFLTSSP
Trigger: TGGGGAGCTTGTTAGAAATCTAATTTCATGCCCCCACCTCAGGCTTACAGAATGAGGACAAGGGATACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTGTCAGGATGGTTAACCCCAATATCCAAGGGAAAGTaGGGTTTCTGCTACACAATAGGGGCAAGGAGTACT +
Preference number: 3 (lower is better)
Translates to: LSGWLTPISKGK*GFCYTIGARST
Trigger: AGTACTCCTTGCCCCTATTGTGTAGCAGAAACCCCACTTTCCCTTGGATATTGGGGTTAACCATCCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTCTGCTCTAATGATTTaGCTGCAAGGTCATAGATGT +
Preference number: 3 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPSALMI*LQGHRC
Trigger: ACATCTATGACCTTGCAGCAAAATCATTAGAGCAGA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCAAGAACATTCATGTTaGCCCATGTTCTCTCATTTC +
Preference number: 3 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPQEHSC*PMFSHF
Trigger: GAAATGAGAGAACATGGGCAAACATGAATGTTCTTG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTAATGAGAAAGAAGTCTaGAGCTTCTTCACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTNEKEV*SFFTAA
Trigger: TGCAGCTGTGAAGAAGCTCAAGACTTCTTTCTCATT...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp TTGAGACGCTCTGATCACAAAGGACCATCTCCTCTATaGTTCAGCAGCATAATGCAACAACTGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: LRRSDHKGPSPL*FSSIMQQLKPE
Trigger: CTCAGGCTTCAGTTGTTGCATTATGCTGCTGAAGCATAGAGGAGATGGTCCTTTGTGATCAGAGCGTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp TTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGACTaGCTACATTATGATTTAAGTTGCAGGAGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: LCFTGSVPLTRD*LHYDLSCRREW
Trigger: CCACTCCCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCCTGTAAAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CCTCTCATTGGGCCCCAGATCTCAACACTGTTGCAATaGGAATCAAGTTTCCAACATATGAACTTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: PLIGPQISTLLQ*ESSFQHMNFGG
Trigger: TCCCCCAAAGTTCATATGTTGGAAACTTGATTCCCATTGCAACAGTGTTGAGATCTGGGGCCCAATGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp AACCCCAAAGTTCATCTTAGCTTGCCAGAAACGAGTTaGGACGCTCTGATCACAAAGGACCATCTCCTCTAT +
Preference number: 3 (lower is better)
Translates to: NPKVHLSLPETS*DALITKDHLLY
Trigger: ATAGAGGAGATGGTCCTTTGTGATCAGAGCGTCTCAACTCGTTTCTGGCAAGCTAAGATGAACTTTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp GTAAAGCTAGGGTCCTACTATACATATCCACCTGTCTaGGCATCCTTAGAGGCCACATTTCTTCTAGTGACC +
Preference number: 3 (lower is better)
Translates to: VKLGSYYTYPPV*ASLEATFLLVT
Trigger: GGTCACTAGAAGAAATGTGGCCTCTAAGGATGCTCAGACAGGTGGATATGTATAGTAGGACCCTAGCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp ACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATaGGAGACTAGAACCCAGGTCTCCCCATTCAATATT +
Preference number: 3 (lower is better)
Translates to: TCSRSHCNLTGK*ETRTQVSPFNI
Trigger: AATATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp GTTGTGGCTACCTTCACAGGCCTCCCATTCTCTAAATaGTTTTCATTTCTTGTCTGCCAACTTCTAGCCTTC +
Preference number: 3 (lower is better)
Translates to: VVATFTGLPFSK*FSFLVCQLLAF
Trigger: GAAGGCTAGAAGTTGGCAGACAAGAAATGAAAAGCATTTAGAGAATGGGAGGCCTGTGAAGGTAGCCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp GCCACATTTCTTCTAGTGACCATCACTCTGAACTCTTaGTTCTGCATATTTCTGCTACCCCACTTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: ATFLLVTITLNS*FCIFLLPHLSL
Trigger: CAGAGACAAGTGGGGTAGCAGAAATATGCAGAACCAAGAGTTCAGAGTGATGGTCACTAGAAGAAATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp ATATTGGCAGAGAAAGAGATCACTGCACTGTCAGGATaGTTAACCCCAATATCCAAGGGAAAGTGGGGTTTC +
Preference number: 3 (lower is better)
Translates to: ILAEKEITALSG*LTPISKGKWGF
Trigger: GAAACCCCACTTTCCCTTGGATATTGGGGTTAACCATCCTGACAGTGCAGTGATCTCTTTCTCTGCCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTGCCTCCATTGCTACTTaGCATTTAAAGGACCGAGAG +
Preference number: 3 (lower is better)
Translates to: SECGKELIRTKGFSGSASASIAT*HLKDRE
Trigger: CTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGC...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTAGTAGTGATAGTGCTTaGGAACCCATTTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: SPVLSKLPGFIISILIFLSSDSA*EPIFQV
Trigger: CACCTGGAAAATGGGTTCCAAAGCACTATCACTACT...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGTGCTACTATTTCCTGTaGCCATCAAACAAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQCYYFL*PSNKSQ
Trigger: TTGACTCTTGTTTGATGGCAACAGGAAATAGTAGCA...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp GGCTGCAAAATACAAGATCAAGGAACCAGCATCTGGTaGGGACCTTCTTGTTGCATCATAAACATGGTGGAA +
Preference number: 3 (lower is better)
Translates to: GCKIQDQGTSIW*GPSCCIINMVE
Trigger: TTCCACCATGTTTATGATGCAACAAGAAGGTCCTCACCAGATGCTGGTTCCTTGATCTTGTATTTTGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CCA 72 bp CTTCCACCAGGGAATATAGTTATGGGTCTGTTAAATTaGAAGATGATCTTGTGCCATCTGGGGCTCCTTATG +
Preference number: 3 (lower is better)
Translates to: LPPGNIVMGLLN*KMILCHLGLLM
Trigger: CATAAGGAGCCCCAGATGGCACAAGATCATCTTCCAATTTAACAGACCCATAACTATATTCCCTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR-3UTR CAA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGAAAATTGCTGTTTTTaGGAGGCTTGGGTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: PAILSDNFTELPGEIFKAENCCF*EAWVGS
Trigger: ACTCCCAACCCAAGCCTCCAAAAAACAGCAATTTTC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR TCA 72 bp CTTCGGTCACTAAAACTGGCAGCTAAGAAGAGTGTTTaGTGTAATGGGGAAGTATTCCTGCTATCATATGAG +
Preference number: 3 (lower is better)
Translates to: LRSLKLAAKKSV*CNGEVFLLSYE
Trigger: CTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCTTAGCTGCCAGTTTTAGTGACCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp CTAAGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTaGTATCATATGAGGCGATACAACATCATGCACAGA +
Preference number: 3 (lower is better)
Translates to: LRRVFDVMGKYS*YHMRRYNIMHR
Trigger: TCTGTGCATGATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR GCA 72 bp GGGTGTTTTACTGTTCCCTGTTGTTTTCCATACCCTTaGCCAACCTCTGTAAATATTCTTTCATTAAACTGT +
Preference number: 3 (lower is better)
Translates to: GCFTVPCCFPYP*PTSVNILSLNC
Trigger: ACAGTTTAATGAAAGAATATTTACAGAGGTTGGGCAAGGGTATGGAAAACAACAGGGAACAGTAAAACACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCGCGCTGGAGTGTGACTaGCGAGGCCCGTCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLALECD*RGPSRA
Trigger: CGCACGGGACGGGCCTCGCCAGTCACACTCCAGCGC...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACGGCTCGTGGGGGCGCTaGAGTGTGACTGGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHGSWGR*SVTGEA
Trigger: GGCCTCGCCAGTCACACTCCAGCGCCCCCACGAGCC...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp CTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTaGCGACACCCACGGCACCCGGGCATTCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LVQGSFPLAGPW*RHPRHPGIPRW
Trigger: CCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCGCCAGATTCATTCCTTaGCTCTGTGGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLARFIP*LCGMAG
Trigger: GCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGC...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACATGTGGGATGGCAGGCTaGCAGGGAACACACGGATGC +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTCGMAG*QGTHGC
Trigger: GCATCCGTGTGTTCCCTGCCAGCCTGCCATCCCACA...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAACCACTGCTAGTCCATaGGGAGGGGGCTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTTTASP*GGGWGS
Trigger: TGAACCCCAGCCCCCTCCCCATGGACTAGCAGTGGT...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCTGCAGGTCTCTTGGATaGGGATGGAAGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLCRSLG*GWKATA
Trigger: AGCTGTGGCCTTCCATCCCCATCCAAGAGACCTGCA...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCAGGGCTTCCATTGGGTaGCTCCTTCTCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLRASIG*LLLHGY
Trigger: ATAGCCATGGAGAAGGAGTCACCCAATGGAAGCCCT...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAGACCTACCCAACCGATaGGATGCCCTTCGGTCACTA +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTDLPNR*DALRSL
Trigger: TAGTGACCGAAGGGCATCCCATCGGTTGGGTAGGTC...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTGGCTGGTCCATGGTTaGGACACCCACGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPWLVHG*DTHGTR
Trigger: CCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACACCCATTCTCTGCTTTaGAGAGTTCCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHTHSLL*RVPLQP
Trigger: AGGCTGGAGAGGAACTCTCCAAAGCAGAGAATGGGT...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTGCAGCGACTGCGGGCTaGTCCTCCTCCGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFAATAG*SSSASG
Trigger: ACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTGC...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGCACCCAGAACCTCTaGTCCTCCCAGCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPGTQNL*SSQLRP
Trigger: GGGTCTGAGCTGGGAGGAGCAGAGGTTCTGGGTGCC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCGGGATTCTCAGGCAGTaGTTCTTAAACTTTAACGTG +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLGILRQ*FLNFNV
Trigger: CACGTTAAAGTTTAAGAAGCACTGCCTGAGAATCCC...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACATCTCCCTCCCCCATGTaGTCCATGTGTCTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTSPSPM*SMCLLN
Trigger: ATTTAAGAGACACATGGAGCACATGGGGGAGGGAGA...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACATCTTTTGCTCCAGTGTaGTGCCTATGTGGACCGTAT +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTSFAPV*CLCGPY
Trigger: ATACGGTCCACATAGGCAGCACACTGGAGCAAAAGA...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGAGACGGGCTCGGGCGTaGGCTCCTCCATCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRRRARA*APPSRG
Trigger: GCCGCGAGATGGAGGAGCCCACGCCCGAGCCCGTCT...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTCCCCTGGCTGGTCCATaGTTGCGACACCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLPLAGP*LRHPRH
Trigger: GTGCCGTGGGTGTCGCAACCATGGACCAGCCAGGGG...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACTGGAAGGCCACAGCTTaGAGGGATGGAATAAATGCA +
Preference number: 4 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHWKATA*RDGINA
Trigger: TGCATTTATTCCATCCCTCCAAGCTGTGGCCTTCCA...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCCCACTTACCCGGGACTaGCTACATTATGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLPLTRD*LHYDLS
Trigger: ACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGG...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GCACCTTCTGTTTCCCTGGGTGGCCAGATTCATTCCTaGCCTCTGTGGGATGGCAGGCTGGCAGGGAACACA +
Preference number: 4 (lower is better)
Translates to: APSVSLGGQIHS*PLWDGRLAGNT
Trigger: TGTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GTTTGGGCACCTCTCCACAGGCTGGGCCACAGGACATaGTGGGTGGTCATTGATCATGCCTGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: VWAPLHRLGHRT*WVVIDHAWQNQ
Trigger: CTGGTTCTGCCAGGCATGATCAATGACCACCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTGCCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTTCCCCACAGCCGCTGTaGCTCAGTCGTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLSPQPL*LSRPGA
Trigger: AGCACCTGGACGACTGAGGCACAGCGGCTGTGGGGA...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGCCTCCCAGGTGGATGTaGGGATGGCGCTGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPPPRWM*GWRCKG
Trigger: ACCCTTACAGCGCCATCCCCACATCCACCTGGGAGG...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCACCTTTTCTTTTTCCTaGGGTCTGTTATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLTFSFS*GLLLAD
Trigger: GTCAGCTAATAACAGACCCCAGGAAAAAGAAAAGGT...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGCACCTCTCCACAGGCTaGGCCACAGGACATTGTGGG +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPHLSTG*ATGHCG
Trigger: CCCACAATGTCCTGTGGCCCAGCCTGTGGAGAGGTG...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTTCTCGCGGCAGCGACTaGGGGCTGCTCCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLSRGSD*GLLLLR
Trigger: GCGGAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGA...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAATGGGGAAGTATTCCTaGTATCATATGAGGCGATAC +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTMGKYS*YHMRRY
Trigger: GTATCGCCTCATATGATAGCAGGAATACTTCCCCAT...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCCATGGGGAGGGGGCTaGGGTTCAGGTGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPPWGGG*GSGGTS
Trigger: AGAGGTCCCACCTGAACCCCAGCCCCCTCCCCATGG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACACCAACATATGAACTTTaGGGGACACATTCAAACCAC +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTPTYEL*GTHSNH
Trigger: GTGGTTTGAATGTGTCCCCCAAAGTTCATATGTTGG...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAATTTTCCACCCTTCCTaGAATGCTACTATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTIFHPS*NATISC
Trigger: ACAGGAAATAGTAGCATTTCAGGAAGGGTGGAAAAT...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCTGAGAGGGCTAAGCTaGACCTTCTGTTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPLRGLS*TFCFPG
Trigger: CCCAGGGAAACAGAAGGTGCAGCTTAGCCCTCTCAG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGTGCTGGGAAAGGCTaGTGTGAGTGTTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPGAGKG*CECSSD
Trigger: GTCAGAGGAACACTCACAGCAGCCTTTCCCAGCACC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCACTGTGCTGGCTCGTaGGGGCGCTGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFHCAGS*GRWSVT
Trigger: AGTCACACTCCAGCGCCCCCACGAGCCAGCACAGTG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCGCCTCGGGTTTGACTaGTACCATTTTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPRLGFD*YHFPPL
Trigger: CAGGGGTGGAAAATGGTACCAGTCAAACCCGAGGCG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGCTGCTCCTCCCAGGTaGATGTGGGGATGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQAAPPR*MWGWRC
Trigger: ACAGCGCCATCCCCACATCCACCTGGGAGGAGCAGC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCTCAGGTGGGACCTCTTaGTTGGGAGCCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPSGGTS*LGASIA
Trigger: AGCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGA...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTTCCGGCTGGGAGATTTaGCCTGTAGGAAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLSGWEI*PVGSSP
Trigger: AGGGCTGCTTCCTACAGGCCAAATCTCCCAGCCGGA...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCCAAGTGGTTCCGGCTaGGAGATTTGGCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPPSGSG*EIWPVG
Trigger: TCCTACAGGCCAAATCTCCCAGCCGGAACCACTTGG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTGGCCTGGGCTGTGGTaGGGACTAATGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRWPGLW*GLMAGR
Trigger: CCTCCCAGCCATTAGTCCCCACCACAGCCCAGGCCA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTAGGTGGCCTGGGCTGTaGTGGGGACTAATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFRWPGL*WGLMAG
Trigger: CCCAGCCATTAGTCCCCACCACAGCCCAGGCCACCT...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTaGGAACCCATTTTCCAGGTGGCCTGGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: VHIQGSPSSDSA*EPIFQVAWAVV
Trigger: CACCACAGCCCAGGCCACCTGGAAAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTCTTCACTTGGTGTTTaGAAGCAGGGCCAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPSSLGV*KQGQPL
Trigger: AAGGGGCTGGCCCTGCTTTCAAACACCAAGTGAAGA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTTGGGTGCAGGAGTTTTaGTCCTCTAGCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTWVQEF*SSSCGQ
Trigger: CTGGCCACAGCTAGAGGATCAAAACTCCTGCACCCA...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTCCACTCTGGGCCTCATaGCCAGCCACAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLPLWAS*PATEGG
Trigger: GCCCCCTTCTGTGGCTGGTCATGAGGCCCAGAGTGG...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCTTGGTTCACTGCCTTTaGCAGCTGTCCCTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPLVHCL*QLSLRA
Trigger: TGCACGAAGGGACAGCTGGCAAAGGCAGTGAACCAA...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTCGCCTAGGCTGGAGTaGAGTAGTGTGATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPSPRLE*SSVILA
Trigger: AGCTAGGATCACACTACTGCACTCCAGCCTAGGCGA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCTTGCCTCTGTGGGATaGCAGGCTGGCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPLASVG*QAGREH
Trigger: GTGTTCCCTGCCAGCCTGCCATCCCACAGAGGCAAG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGTGGGGACTAATGGCTaGGAGGCAGGCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPVGTNG*EAGNEK
Trigger: TTTCTCATTGCCTGCCTCCCAGCCATTAGTCCCCAC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCCTCCGCCTCGGGTTTaGCTGGTACCATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPPPPRV*LVPFST
Trigger: GGTGGAAAATGGTACCAGTCAAACCCGAGGCGGAGG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTCGAGTTGAGACGCTCTaGTCACAAAGGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLRVETL*SQRTIS
Trigger: GGAGATGGTCCTTTGTGATCAGAGCGTCTCAACTCG...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCAGCTCTCTTCCTACTaGGCTGCAGTGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFQLSSY*AAVGAG
Trigger: TCCTGCACCCACTGCAGCTCAGTAGGAAGAGAGCTG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGACCTCAGTCGTCCAGGTaGTGCTCCTCCCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRPQSSR*CSSQVD
Trigger: ATCCACCTGGGAGGAGCAGCACCTGGACGACTGAGG...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGTGGGAGAACAAGACTaGAGTTACCACTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLVGEQD*SYHSGP
Trigger: AGGCCCAGAGTGGTAACTGCAGTCTTGTTCTCCCAC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTACCCCTGGCTTCTCCTaGGGTGGTGAATTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTTPGFS*GGEFKN
Trigger: GTTCTTGAATTCACCACCCCAGGAGAAGCCAGGGGT...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCAGCTGCAGGTCTCTTaGATGGGGATGGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQQLQVS*MGMEGH
Trigger: GTGGCCTTCCATCCCCATCCAAGAGACCTGCAGCTG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTAACCCATTTTCCAGGTaGCCTGGGCTGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFNPFSR*PGLWWG
Trigger: TCCCCACCACAGCCCAGGCCACCTGGAAAATGGGTT...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTCCAGATAACTCTGTTTaGGCACCTCTCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTPDNSV*APLHRL
Trigger: CAGCCTGTGGAGAGGTGCCCAAACAGAGTTATCTGG...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCATTGGACAGAATAGCTaGGCACATGGATGTGGACCC +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPIGQNS*AHGCGP
Trigger: GGGTCCACATCCATGTGCCCAGCTATTCTGTCCAAT...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATGGGGCTCAGAGAGGCTaGGTGAGTTATTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNGAQRG*VSYLGS
Trigger: GGACCCCAAATAACTCACTCAGCCTCTCTGAGCCCC...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGGGTCTGTTATTAGCTaGCTGGGAGTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPGSVIS*LGVGSS
Trigger: ACTAGAACCAACTCCCAGTCAGCTAATAACAGACCC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTCAGGGAACACACGGATaGATCCTGGGGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLQGTHG*ILGHSH
Trigger: GTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTG...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGAGGGATGGAATAAATaGACTCAGAGGAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLEGWNK*TQRKGS
Trigger: GCTCCCCTTCCTCTGAGTGCATTTATTCCATCCCTC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTATACAGGGCCTTCCCTaGATCTTGGTTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTIQGLP*ILVHCL
Trigger: AAGGCAGTGAACCAAGATGCAGGGAAGGCCCTGTAT...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCCCAAAGACCACTGCTaGAGAGTGGTGGATCATTTA +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPPKDHC*RVVDHL
Trigger: TAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CAGGTCTCCCTCCCCCATGTGCTCCATGTGTCTCTTAAATGGAGAGAGTGTACTTGTCCCAAAGACCACTaGTGCAGAGTGGTGGATCAT +
Preference number: 4 (lower is better)
Translates to: QVSLPHVLHVSLKWRECTCPKDH*CRVVDH
Trigger: ATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACA...AGTACACTCTCTCCATTTAAGAGACACATGGAGCACATGGGGGAGGGAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCAAGCTCCCCAGAGATaGCAATGCTGTCCATCCGTG +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRQAPQR*QCCPSV
Trigger: CACGGATGGACAGCATTGGCATCTCTGGGGAGCTTG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCCAGCCTCCTGGGTCCTaGTCCAGGGCTCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAQPPGS*SRALFP
Trigger: GGGGAAAAGAGCCCTGGACCAGGACCCAGGAGGCTG...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTAGGTGCCCAGGAACCTaGGAAGGTGACTACCCTATC +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPRCPGT*EGDYPI
Trigger: GATAGGGTAGTCACCTTCCCAGGTTCCTGGGCACCT...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCCTATGGAATGGGTGGTaGGAGAACAAGACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPLWNGW*ENKTAV
Trigger: AACTGCAGTCTTGTTCTCCCACCACCCATTCCATAG...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GGTGGGACCTCTTGGTTGGGAGCCTCCATTGCTACTTaGCATTTAAAGGACCGAGAGTCTCCTCAAGACAAG +
Preference number: 4 (lower is better)
Translates to: GGTSWLGASIAT*HLKDRESPQDK
Trigger: CTTGTCTTGAGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp TTGCAGAGGCTGTTTGTCCTTCAACCACAGTTTAAGTaGCACTGCCCTGGAGCACCCTCTTTTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LQRLFVLQPQFK*HCPGAPSFSPL
Trigger: CAGGGGTGAAAAAGAGGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTTGAAGGACAAACAGCCTCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp ACCATTGCCTGGAAAACCCACCACCCATTCTCTGCTTaGGAGAGTTCCTCTCCAGCCTGTGTTCTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TIAWKTHHPFSA*ESSSPACVLLK
Trigger: CTTAAGGAGAACACAGGCTGGAGAGGAACTCTCCAAAGCAGAGAATGGGTGGTGGGTTTTCCAGGCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGATTTTCCACCCCTGCTaGCTGGAGTGGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQIFHPC*LEWSPL
Trigger: AAGTGGTGACCACTCCAGTCAGCAGGGGTGGAAAAT...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCCTTGGCACAGCGGATaGTCATCACGACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPPWHSG*SSRQGR
Trigger: TCTTCCTTGTCGTGATGATCATCCGCTGTGCCAAGG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTCCAGTTCCAAAAGGTaGCCAGGAACCTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRSSSKR*PGTWEG
Trigger: ACCTTCCCAGGTTCCTGGGCACCTTTTGGAACTGGA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTCTCTTTTCCCCTGGCTaGTCCATGGTTGCGACACCC +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLLFSPG*SMVATP
Trigger: GGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAG...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCGGGCTGGGGTTCAGGTaGGACCTCTTGGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIGLGFR*DLLVGS
Trigger: GCTCCCAACCAAGAGGTCCCACCTGAACCCCAGCCC...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATGCCTTCCCTGCATCTTaGTTCACTGCCTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNAFPAS*FTAFAS
Trigger: GCTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGC...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGAGGCTGTGTGTCCCTCTaGACACAGGCAACCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRGCVSL*TQATCL
Trigger: AAGACAGGTTGCCTGTGTCCAGAGGGACACACAGCC...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTACCCAGACAGGAGATTaGAGGGCAGGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLTQTGD*RAGGKR
Trigger: CCTCTTGCCTCCTGCCCTCCAATCTCCTGTCTGGGT...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTGGGCTATGGAATGGGTaGTGGGAGAACAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPGLWNG*WENKTA
Trigger: TGCAGTCTTGTTCTCCCACCACCCATTCCATAGCCC...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCGGAGGAGGGAGGGCCTaGGAAGAGCCATCATCGATG +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISGGGRA*EEPSSM
Trigger: CATCGATGATGGCTCTTCTCAGGCCCTCCCTCCTCC...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGTACAGAGCTTCCAGGTaGGATCTTCAAGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQYRASR*DLQGLF
Trigger: GAAGAGGCCTTGAAGATCTCACCTGGAAGCTCTGTA...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGTTGGGAGCCTCCATTaGTACTTTGCATTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPVGSLH*YFAFKG
Trigger: TCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAAC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTGCATCTTGGTTCACTaGCTTTGCCAGCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRCILVH*LCQLSL
Trigger: AAGGGACAGCTGGCAAAGGCAGTGAACCAAGATGCA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCAGCGGTCAGGCATCATaGGGGTCACCCAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKASGQAS*GSPKEN
Trigger: GTTCTCCTTGGGTGACCCCCATGATGCCTGACCGCT...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAACACACGGATGCATCCTaGGGCACAGCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKHTDAS*GTATHR
Trigger: TCTGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTG...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTAGGGCTCTTTTCCCCTaGCTGGTCCATGGTTGCGAC +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASRALFP*LVHGCD
Trigger: GTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCT...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGAGTTCCTCTGACCAAGTaGTTCCGGCTGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRVPLTK*FRLGDL
Trigger: CAAATCTCCCAGCCGGAACCACTTGGTCAGAGGAAC...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGAAAGTAGAGGGGCTATaGAATGGGTGGTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQKVEGL*NGWWEN
Trigger: GTTCTCCCACCACCCATTCCATAGCCCCTCTACTTT...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTTTCACTCCGCCCTCATaGCCTAATCACCTCTCATTG +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFFTPPS*PNHLSL
Trigger: CAATGAGAGGTGATTAGGCCATGAGGGCGGAGTGAA...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp CTGAACTCTTGGTTCTGCATATTTCTGCTACCCCACTaGTCTCTGGGACTGTTGGCCCCTTCCAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: LNSWFCIFLLPH*SLGLLAPSRLY
Trigger: ATACAATCTGGAAGGGGCCAACAGTCCCAGAGACAAGTGGGGTAGCAGAAATATGCAGAACCAAGAGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTATTCCTGCTATCATATaGGGCGATACAACATCATGC +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLIPAII*GDTTSC
Trigger: GCATGATGTTGTATCGCCTCATATGATAGCAGGAAT...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGGTCATAGATGTAGGTaGTGGAGTGGGAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAGHRCR*WSGSGV
Trigger: CACCCCACTCCCACTCCATCACCTACATCTATGACC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGACTCAGAGAGGCTGAGTaGGTTATTTGGGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRLREAE*VIWGPL
Trigger: TAGAGGACCCCAAATAACTCACTCAGCCTCTCTGAG...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATACATATCCACCTGTCTaGGCATCCTTAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNTYPPV*ASLEAT
Trigger: TGTGGCCTCTAAGGATGCTCAGACAGGTGGATATGT...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTCCCACCTCAGACTCCTaGGTAGCTGGGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASPTSDS*VAGTIG
Trigger: ACCTATAGTCCCAGCTACTCAGGAGTCTGAGGTGGG...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATTCATCTCATGGACTGTaGACCCCCAAAAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNSSHGL*TPKKGT
Trigger: GGTACCCTTTTTGGGGGTGCACAGTCCATGAGATGA...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGAAGGGGAGCTCAGGTaGTCTCATTTAACTTCGTAC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQEGELR*SHLTSY
Trigger: GTACGAAGTTAAATGAGAGCACCTGAGCTCCCCTTC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGCTACTATTTCCTGTTaGCATCAAACAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPATISC*HQTRVK
Trigger: CTTGACTCTTGTTTGATGGCAACAGGAAATAGTAGC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTGGTTCTGCATATTTCTaGTACCCCACTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPGSAYF*YPTCLW
Trigger: CCAGAGACAAGTGGGGTAGCAGAAATATGCAGAACC...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATCTCTTCCTACTGAGCTaGAGTGGGTGCAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNLFLLS*SGCRSF
Trigger: AAAACTCCTGCACCCACTGCAGCTCAGTAGGAAGAG...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTGTGGGACCTCTTGGTTaGGAGCCTCCATTGCTACTT +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLVGPLG*EPPLLL
Trigger: AAGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCAC...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGAAAATATATCAAAATaGTGGTTTCCGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLENISK*WFPGGG
Trigger: CCCACCTCCCGGAAACCACCATTTTGATATATTTTC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCTCAATATTCATCTCATaGACTGTGCACCCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPSIFIS*TVHPQK
Trigger: TTTTTGGGGGTGCACAGTCCATGAGATGAATATTGA...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTATTTTCCAGGTGGCCTaGGCTGTGGTGGGGACTAAT +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLIFQVA*AVVGTN
Trigger: ATTAGTCCCCACCACAGCCCAGGCCACCTGGAAAAT...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTCTGCCTGAAGAGCTGTaGCCTTGTCCACATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASLPEEL*PCPHSG
Trigger: CCCTGAATGTGGACAAGGCCACAGCTCTTCAGGCAG...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGTCATTGATCATGCCTaGCAGAACCAGTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQVIDHA*QNQSST
Trigger: TGTTGAGGACTGGTTCTGCCAGGCATGATCAATGAC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCTGGGCACATGGATGTaGACCCAGATAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRLGTWM*TQITLF
Trigger: AAACAGAGTTATCTGGGTCCACATCCATGTGCCCAG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGACTTATGTTGCCAGGCTaGTTTCAAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRLMLPG*FQTPGL
Trigger: GAGCCCAGGAGTTTGAAACCAGCCTGGCAACATAAG...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCTAATCACCTCTCATTaGGCCCCAGATCTCAACACT +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPLITSH*APDLNT
Trigger: AGTGTTGAGATCTGGGGCCCAATGAGAGGTGATTAG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTAGGAACCTGGGAAGGTaGCTACCCTATCATCTCACA +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLRNLGR*LPYHLT
Trigger: TGTGAGATGATAGGGTAGTCACCTTCCCAGGTTCCT...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCTTCTCCTGGGGTGGTaGATTCAAGAACATTCATGT +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRLLLGW*IQEHSC
Trigger: ACATGAATGTTCTTGAATTCACCACCCCAGGAGAAG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCAATATGGCTGCTGGTaGGATTTTATGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFQYGCW*DFMFPL
Trigger: CAGGGGAAACATAAAATCTCACCAGCAGCCATATTG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTGGCGATACAACATCATaGACAGAGTATGAATTTGAC +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLGDTTS*TEYEFD
Trigger: GTCAAATTCATACTCTGTGCATGATGTTGTATCGCC...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATAACCTGACTGGTAAATaGGAGACTAGAACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNNLTGK*ETRTQV
Trigger: GACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTT...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGAAGAACATTCATGTTTaGCCATGTTCTCTCATTTCG +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPKNIHV*PCSLIS
Trigger: CGAAATGAGAGAACATGGGCAAACATGAATGTTCTT...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGGGCTTGGGTTGGGAGTaGTTTTTATATTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRGLGWE*FLYFPP
Trigger: GGGTGGAAAATATAAAAAGCACTCCCAACCCAAGCC...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTGGACCATCTCCTCTATaGTTCAGCAGCATAATGCAA +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFGPSPL*FSSIMQ
Trigger: TTGCATTATGCTGCTGAAGCATAGAGGAGATGGTCC...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTGTTTTCCATACCCTTaGCCAACCTCTGTAAATATT +
Preference number: 4 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPCFPYP*PTSVNI
Trigger: AATATTTACAGAGGTTGGGCAAGGGTATGGAAAACA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATTGGAAGATGATCTTGTaGCATCTGGGGCTCCTTATG +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNWKMIL*HLGLLM
Trigger: CATAAGGAGCCCCAGATGGCACAAGATCATCTTCCA...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTACCCAAGGAGAACAGTaGCCTTTCACTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASTQGEQ*PFTESR
Trigger: CCTGCTCTCAGTGAAAGGCCACTGTTCTCCTTGGGT...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTCCACCCCTGCTGACTaGAGTGGTCACCACTTCATA +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASSTPAD*SGHHFI
Trigger: TATGAAGTGGTGACCACTCCAGTCAGCAGGGGTGGA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGGGGGTGTCTGTTGCTaGATCCAGTTCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAGGVCC*IQFQKV
Trigger: CACCTTTTGGAACTGGATCCAGCAACAGACACCCCC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTACTGCTGCAGAGTGGTaGATCATTTATCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLTAAEW*IIYQTL
Trigger: TAAAGTCTGATAAATGATCCACCACTCTGCAGCAGT...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGATTGCCTTGTCATCCCTaGGTGTTTTACTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRLPCHP*VFYCSL
Trigger: CAGGGAACAGTAAAACACCCAGGGATGACAAGGCAA...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCACCCCCAGACAATATaGCTGCTGGTGAGATTTTAT +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFHPQTI*LLVRFY
Trigger: ATAAAATCTCACCAGCAGCCATATTGTCTGGGGGTG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GATCTTGTGCCATCTGGGGCTCCTTATGTTGAAATATaGGCAGAGAAAGAGATCACTGCACTGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: DLVPSGAPYVEI*AEKEITALSGW
Trigger: CCATCCTGACAGTGCAGTGATCTCTTTCTCTGCCAATATTTCAACATAAGGAGCCCCAGATGGCACAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCGCAGCCCTCAGAAGTTaGGAAAAGCTGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIAALRS*EKLKVP
Trigger: TGGCACCTTCAGCTTTTCTCAACTTCTGAGGGCTGC...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCATTGTGGGTGGTCATTaGTCATGCCTGGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAIVGGH*SCLAEP
Trigger: TGGTTCTGCCAGGCATGATCAATGACCACCCACAAT...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATCTGAGATTACAGACATaGGCTACCTTGCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNLRLQT*ATLPCH
Trigger: ATGACAAGGCAAGGTAGCTCATGTCTGTAATCTCAG...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTTGGGGCTCCTTATGTTaGAATATTGGCAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPWGSLC*NIGRER
Trigger: TCTTTCTCTGCCAATATTTCAACATAAGGAGCCCCA...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACGAGCTTCTTCACAGCTaGAGGTCTCTTGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYELLHS*RSLGWG
Trigger: TCCCCATCCAAGAGACCTGCAGCTGTGAAGAAGCTC...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCAACCACAGTTTAAGTTaGACTGCCCTGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKANHSLS*TALEHP
Trigger: AGGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTT...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTAAGTTCATCTTAGCTTaGCAGAAACGAGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: SWLGASIATLHLKDRESPKFILA*QKRVET
Trigger: CGTCTCAACTCGTTTCTGGCAAGCTAAGATGAACTT...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCTCAGTGCTTCGTGTGTaGCATCTCTTTCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKASVLRV*HLFPAK
Trigger: CTTGGCAGGAAAGAGATGGCACACACGAAGCACTGA...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAGAGGAATTGGGACTTaGGGCCGGTTTTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYRGIGT*GRFCRL
Trigger: GAGCCTACAAAACCGGCCCCAAGTCCCAATTCCTCT...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCGAGAGGGATGACAACTaGATAGCCCCTGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAERDDN*IAPEML
Trigger: CAGCATTTCAGGGGCTATCCAGTTGTCATCCCTCTC...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCTGTTATTAGCTGACTaGGAGTTGGTTCTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQLLLAD*ELVLVC
Trigger: GCAAACTAGAACCAACTCCCAGTCAGCTAATAACAG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAAGCAATCTGCCTGTGTTaGCCTCCCAAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKAICLC*PPKVLR
Trigger: TCTCAGCACTTTGGGAGGCCAACACAGGCAGATTGC...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTAATCTGTGGATACTGTaGCAACTCATTGAAGACACG +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFNLWIL*QLIEDT
Trigger: CGTGTCTTCAATGAGTTGCCACAGTATCCACAGATT...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp TTGCCCATGTTCTCTCATTTCGTCCTCACAACAACCTaGCGAGGTAGATGTTATTCCCTCACTTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: LPMFSHFVLTTT*RGRCYSLTLQV
Trigger: CACCTGTAAAGTGAGGGAATAACATCTACCTCGCAAGGTTGTTGTGAGGACGAAATGAGAGAACATGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GGCCACATTTCTTCTAGTGACCATCACTCTGAACTCTaGGTTCTGCATATTTCTGCTACCCCACTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GHISSSDHHSEL*VLHISATPLVS
Trigger: AGAGACAAGTGGGGTAGCAGAAATATGCAGAACCAAGAGTTCAGAGTGATGGTCACTAGAAGAAATGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGCTAAGAAGAGTGTTTaGTGTAATGGGGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQAKKSV*CNGEVF
Trigger: GAATACTTCCCCATTACATCAAACACTCTTCTTAGC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTTGCCAGAAACGAGTTaGGACGCTCTGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASLPETS*DALITK
Trigger: CTTTGTGATCAGAGCGTCTCAACTCGTTTCTGGCAA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTGAGACAGGGAGACACTaGTCTTTCAACTCGATAAGA +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLETGRH*SFNSIR
Trigger: TCTTATCGAGTTGAAAGATCAGTGTCTCCCTGTCTC...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTGGACTGGCTACATTATaGTTTAAGTTGCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLGLATL*FKLQEG
Trigger: TCCCTCCTGCAACTTAAATCATAATGTAGCCAGTCC...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACACCCAACCGATGGGATaGCCTTCGGTCACTAAAACT +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYTQPMG*PSVTKT
Trigger: AGTTTTAGTGACCGAAGGGCATCCCATCGGTTGGGT...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTCTGAACTCTTGGTTCTaGATATTTCTGCTACCCCAC +
Preference number: 4 (lower is better)
Translates to: SPVLSKLPGFIISILIFLLNSWF*IFLLPH
Trigger: GTGGGGTAGCAGAAATATGCAGAACCAAGAGTTCAG...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTCACGATTTTGGAGGCTaGAAAATACAAGATCAAGGA +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFHDFGG*KIQDQG
Trigger: TCCTTGATCTTGTATTTTGCAGCCTCCAAAATCGTG...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACTTCTGTTTCCCTGGGTaGCCAGATTCATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYFCFPG*PDSFLA
Trigger: GGCAAGGAATGAATCTGGCCACCCAGGGAAACAGAA...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCCACCTTCTGTTTCCCTaGGTGGCCAGATTCATTCCT +
Preference number: 4 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIHLLFP*VARFIP
Trigger: AGGAATGAATCTGGCCACCCAGGGAAACAGAAGGTG...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGTTTGGCTCACGATTTTaGAGGCTGCAAAATACAAGA +
Preference number: 4 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRFGSRF*RLQNTR
Trigger: TCTTGTATTTTGCAGCCTCCAAAATCGTGAGCCAAA...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp GCTTCCACCAGGGAATATAGTTATGGGTCTGTTAAATaGGAAGATGATCTTGTGCCATCTGGGGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: ASTREYSYGSVK*EDDLVPSGAPY
Trigger: ATAAGGAGCCCCAGATGGCACAAGATCATCTTCCAATTTAACAGACCCATAACTATATTCCCTGGTGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCCTTCAATACTTCTGTaGATTTCTTTTGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQPSILL*ISFADQ
Trigger: CTGATCTGCAAAAGAAATGCACAGAAGTATTGAAGG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTGGAGTGGGACTAAATTaGTATCACCCCCAGACAATA +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASGVGLN*YHPQTI
Trigger: TATTGTCTGGGGGTGATAGCAATTTAGTCCCACTCC...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTGTTGTTTTTGGCCAATaGAAGACCCAGACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASVVFGQ*KTQTGD
Trigger: ATCTCCTGTCTGGGTCTTCCATTGGCCAAAAACAAC...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTAGCAAAGTTTGTGAATaGCTGCTAAGTGGTAATAAG +
Preference number: 4 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFSKVCE*LLSGNK
Trigger: CTTATTACCACTTAGCAGCCATTCACAAACTTTGCT...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATCTGTGGATGAAGATTTaGGTCATTCCACCAGATAAA +
Preference number: 4 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNLWMKI*VIPPDK
Trigger: TTTATCTGGTGGAATGACCCAAATCTTCATCCACAG...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACACTGTGGCAACTCATTaGAGACACGGCACTAAGAAT +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYTVATH*RHGTKN
Trigger: ATTCTTAGTGCCGTGTCTTCAATGAGTTGCCACAGT...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCAGCTTTTCACAGAAATaGCTGGCTTCTCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISSFSQK*LASQGR
Trigger: CCTACCTTGAGAAGCCAGGCATTTCTGTGAAAAGCT...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACCCACCCTTCCTGAAATaGTACTATTTCCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYPPFLK*YYFLLP
Trigger: TGGCAACAGGAAATAGTAGCATTTCAGGAAGGGTGG...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCGTAGTGATAGTGCTTTaGAACCCATTTTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISVVIVL*NPFSRW
Trigger: CCACCTGGAAAATGGGTTCCAAAGCACTATCACTAC...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCGTAGTTCTCTTCACTTaGTGTTTGAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIVVLFT*CLKAGP
Trigger: TGGCCCTGCTTTCAAACACCAAGTGAAGAGAACTAC...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTCTGTAAGCCTGAGGTaGGGGCATGAAATTAGATTT +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASSVSLR*GHEIRF
Trigger: AAATCTAATTTCATGCCCCCACCTCAGGCTTACAGA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGAATGGGTCTGTTAAATTaGAAGATGATCTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRMGLLN*KMILCH
Trigger: ATGGCACAAGATCATCTTCCAATTTAACAGACCCAT...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR TCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCAGTCAAGAGATAAGGTaGAACCCATTAGCAAATCTG +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKASQEIR*NPLANL
Trigger: CAGATTTGCTAATGGGTTTCACCTTATCTCTTGACT...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCCTGAACCTGAGGCAATaGACAAAAGGCTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISLNLRQ*TKGFCF
Trigger: AAAGCAAAAGCCTTTTGTGCATTGCCTCAGGTTCAG...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCTGGCCTGCCTGTTCCTaGGTAGTTTGTTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISWPACS*VVCFCF
Trigger: AAAACAAAAACAAACTACCCAGGAACAGGCAGGCCA...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGACTTATGTTGAAATATTaGCAGAGAAAGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRLMLKY*QRKRSL
Trigger: CAGTGATCTCTTTCTCTGCCAATATTTCAACATAAG...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCAATATATCAAAATGGTaGTTTCCGGGAGGTGGGATT +
Preference number: 4 (lower is better)
Translates to: LFPVAIKQESRDKVKPISNISKW*FPGGGI
Trigger: AATCCCACCTCCCGGAAACCACCATTTTGATATATT...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCATCACTCTGAACTCTTaGTTCTGCATATTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PAILSDNFTELPGEIFKAITLNS*FCIFLL
Trigger: TAGCAGAAATATGCAGAACCAAGAGTTCAGAGTGAT...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTTCTTTAGGAATCTGTaGATACTGTGGCAACTCATT +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASFFRNL*ILWQLI
Trigger: AATGAGTTGCCACAGTATCCACAGATTCCTAAAGAA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTAGTTTGCATTGTAAATaGATGCTGATGAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SECGKELIRTKGFSGSASSLHCK*MLMSFS
Trigger: TGAAAAGCTCATCAGCATGCATTTACAATGCAAACT...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
3UTR CAA 72 bp CCAACTTCTAGCCTTCAATACTTCTGTGCATTTCTTTaGCAGATCAGTTTATCTTTCTATCCACAACCCCAA +
Preference number: 4 (lower is better)
Translates to: PTSSLQYFCAFL*QISLSFYPQPQ
Trigger: TTGGGGTTGTGGATAGAAAGATAAACTGATCTGCAAAAGAAATGCACAGAAGTATTGAAGGCTAGAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR GCA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAATTTTCATTTCTTGTCTaGCAACTTCTAGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKFSFLV*QLLAFN
Trigger: ATTGAAGGCTAGAAGTTGGCAGACAAGAAATGAAAA...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 90 bp AGTGTGACTGGCGAGGCCCGTCCCGTGCGCTCCCGGGGTCCTGGCTaGGCCGGCGCCGAGCCCAGGGCGACCGCGGATCGCCGGCTACGG +
Preference number: 5 (lower is better)
Translates to: SVTGEARPVRSRGPG*AGAEPRATADRRLR
Trigger: CCGTAGCCGGCGATCCGCGGTCGCCCTGGGCTCGGCGCCGGCCCAGCCAGGACCCCGGGAGCGCACGGGACGGGCCTCGCCAGTCACACT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 90 bp GGGCTCGGGCGTGGGCTCCTCCATCTCGCGGCAGCGACTGCGGGCTaGTCCTCCTCCGCCTCGGGTTTGACTGGTACCATTTTCCACCCC +
Preference number: 5 (lower is better)
Translates to: GLGRGLLHLAAATAG*SSSASGLTGTIFHP
Trigger: GGGGTGGAAAATGGTACCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACGCCCGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 90 bp GCACAGCCACCCACAGAGCGCCAGGTCCAGTCCCCACAGCCGCTGTaGCTCAGTCGTCCAGGTGCTGCTCCTCCCAGGTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: AQPPTERQVQSPQPL*LSRPGAAPPRWMWG
Trigger: TCCCCACATCCACCTGGGAGGAGCAGCACCTGGACGACTGAGGCACAGCGGCTGTGGGGACTGGACCTGGCGCTCTGTGGGTGGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 90 bp CCAAGGTCAGCCCTTTGTCTACGTCGACATAGACGGGCTCGGGCGTaGGCTCCTCCATCTCGCGGCAGCGACTGCGGGCTGCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PRSALCLRRHRRARA*APPSRGSDCGLLLL
Trigger: GAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACGCCCGAGCCCGTCTATGTCGACGTAGACAAAGGGCTGACCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 90 bp CATAGACGGGCTCGGGCGTGGGCTCCTCCATCTCGCGGCAGCGACTaGGGGCTGCTCCTCCTCCGCCTCGGGTTTGACTGGTACCATTTT +
Preference number: 5 (lower is better)
Translates to: HRRARAWAPPSRGSD*GLLLLRLGFDWYHF
Trigger: AAAATGGTACCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACGCCCGAGCCCGTCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 90 bp CACGAGGAGCGGTCAGGCATCATGGGGGTCACCCAAGGAGAACAGTaGCCTTTCACTGAGAGCAGGCACTGTGCTGGCTCGTGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: HEERSGIMGVTQGEQ*PFTESRHCAGSWGR
Trigger: GCGCCCCCACGAGCCAGCACAGTGCCTGCTCTCAGTGAAAGGCCACTGTTCTCCTTGGGTGACCCCCATGATGCCTGACCGCTCCTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGCTGGTCCATGGTTGCGACACCCACGGCACCCGGGCATTCCACGCTGGTGCTCTCCTCCGCCTCGGGTTaGACTGGTACCATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: GWSMVATPTAPGHSTLVLSSASG*TGTIFH
Trigger: GTGGAAAATGGTACCAGTCAAACCCGAGGCGGAGGA...GAGCACCAGCGTGGAATGCCCGGGTGCCGTGGGTGTCGCAACCATGGACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS TCA 90 bp GTCAGGCATCATGGGGGTCACCCAAGGAGAACAGTGGCCTTTCACTaGGAGCAGGCACTGTGCTGGCTCGTGGGGGCGCTGGAGTGTGAC +
Preference number: 5 (lower is better)
Translates to: VRHHGGHPRRTVAFH*EQALCWLVGALECD
Trigger: GTCACACTCCAGCGCCCCCACGAGCCAGCACAGTGCCTGCTCTCAGTGAAAGGCCACTGTTCTCCTTGGGTGACCCCCATGATGCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 90 bp AGGACCCTGGCTGTTCCAGGAGGCACGAGGAGCGGTCAGGCATCATaGGGGTCACCCAAGGAGAACAGTGGCCTTTCACTGAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: RTLAVPGGTRSGQAS*GSPKENSGLSLRAG
Trigger: GCCTGCTCTCAGTGAAAGGCCACTGTTCTCCTTGGGTGACCCCCATGATGCCTGACCGCTCCTCGTGCCTCCTGGAACAGCCAGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACGGTGGGACCTCTTGGTaGGGAGCCTCCATTGCTACT +
Preference number: 5 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHGGTSW*GASIAT
Trigger: AGTAGCAATGGAGGCTCCCAACCAAGAGGTCCCACC...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACACAACCACAGTTTAAGTaGCACTGCCCTGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTQPQFK*HCPGAP
Trigger: GGGTGCTCCAGGGCAGTGCAACTTAAACTGTGGTTG...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAGACTTTAGAGAGGGCTaGGGGCAACATGAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTDFREG*GQHEGS
Trigger: ACTCCCTTCATGTTGCCCCAAGCCCTCTCTAAAGTC...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACATGGAAGGCCACAGCTaGGAGGGATGGAATAAATGC +
Preference number: 5 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHMEGHS*EGWNKC
Trigger: GCATTTATTCCATCCCTCCAAGCTGTGGCCTTCCAT...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACACTGGGGCTCCTTATGTaGAAATATTGGCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTLGLLM*KYWQRK
Trigger: CTTTCTCTGCCAATATTTCAACATAAGGAGCCCCAG...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGGTCCTGGTCCAGGGCTCTTTTCCCCTGGCTGGTCCATGGTTGCGACACCCACAATGAGAAAGAAGTCTaGAGCTTCTTCACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSWSRALFPWLVHGCDTHNEKEV*SFFTAA
Trigger: TGCAGCTGTGAAGAAGCTCAAGACTTCTTTCTCATT...GTGGGTGTCGCAACCATGGACCAGCCAGGGGAAAAGAGCCCTGGACCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GATGGCAGGCTGGCAGGGAACACACGGATGCATCCTGGGGCACAGCCACCCACAAGGCAATTATGTAAATaGGTAGACGCCATATCCCTT +
Preference number: 5 (lower is better)
Translates to: DGRLAGNTRMHPGAQPPTRQLCK*VDAISL
Trigger: AAGGGATATGGCGTCTACCAATTTACATAATTGCCT...TGTGGGTGGCTGTGCCCCAGGATGCATCCGTGTGTTCCCTGCCAGCCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTCTGGCTGGTCCATGGTaGCGACACCCACGGCACCCG +
Preference number: 5 (lower is better)
Translates to: SECGKELIRTKGFSGSASLAGPW*RHPRHP
Trigger: CGGGTGCCGTGGGTGTCGCAACCATGGACCAGCCAG...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTAGACAGCATCTCTCTTaGTCGCCTAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLRQHLS*SPRLEC
Trigger: GCACTCCAGCCTAGGCGACAAAGAGAGATGCTGTCT...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGATTCGCTAGGGCACTaGGTACTCCCTGTATCCCTT +
Preference number: 5 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPDSLGH*VLPVSL
Trigger: AAGGGATACAGGGAGTACCAAGTGCCCTAGCGAATC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GCCTTGTCCACATTCAGGGGTCACCTAGTAGTGATAGTGCTTTGGAACCCATTTGGCCAGATTCATTCCTaGCCTCTGTGGGATGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALSTFRGHLVVIVLWNPFGQIHS*PLWDGR
Trigger: CCTGCCATCCCACAGAGGCAAGGAATGAATCTGGCC...AAATGGGTTCCAAAGCACTATCACTACTAGGTGACCCCTGAATGTGGACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGACAGCTGCAGGTCTCTaGGATGGGGATGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQTAAGL*DGDGRP
Trigger: TGGCCTTCCATCCCCATCCAAGAGACCTGCAGCTGT...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCTTGTCTCTGGGACTGTaGGCCCCTTCCAGATTGTAT +
Preference number: 5 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPLSLGL*APSRLY
Trigger: ATACAATCTGGAAGGGGCCAACAGTCCCAGAGACAA...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGGCCTCCATTGCTACTTaGCATTTAAAGGACCGAGAG +
Preference number: 5 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPASIAT*HLKDRE
Trigger: CTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGC...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GAAGTGACTTGCTCAAGGTCGCATTGTAACCTGACTGGTAAATGCGAGACTAGATTCAGGTGGGACCTCTaGGTTGGGAGCCTCCATTGC +
Preference number: 5 (lower is better)
Translates to: EVTCSRSHCNLTGKCETRFRWDL*VGSLHC
Trigger: GCAATGGAGGCTCCCAACCAAGAGGTCCCACCTGAA...TCTAGTCTCGCATTTACCAGTCAGGTTACAATGCGACCTTGAGCAAGTCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTTTCCGGCTGGGAGATTaGGCCTGTAGGAAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SPVLSKLPGFIISILIFLFRLGD*ACRKQP
Trigger: GGGCTGCTTCCTACAGGCCAAATCTCCCAGCCGGAA...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATCTTGGTTCACTGCCTTaGCCAGCTGTCCCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNLGSLP*PAVPSC
Trigger: GCACGAAGGGACAGCTGGCAAAGGCAGTGAACCAAG...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCGTGTAGTTCTCTTCACTaGGTGTTTGAAAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PQKGALAVVLYRKCSTYPCSSLH*VFESRA
Trigger: GGCCCTGCTTTCAAACACCAAGTGAAGAGAACTACA...CGGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CATTGTAACCTGACTGGTAAATGCGAGACTAGAACCCAGGTCTCCCCATTCAATTTTCTGCTACCCCACTaGTCTCTGGGACTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HCNLTGKCETRTQVSPFNFLLPH*SLGLLA
Trigger: GGCCAACAGTCCCAGAGACAAGTGGGGTAGCAGAAA...ATTGAATGGGGAGACCTGGGTTCTAGTCTCGCATTTACCAGTCAGGTTACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGCTGGGCCACAGGACATaGTGGGTGGTCATTGATCAT +
Preference number: 5 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQLGHRT*WVVIDH
Trigger: ATGATCAATGACCACCCACAATGTCCTGTGGCCCAG...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCCCCTGTCTTAAGCAAGCTCCCCGGCTTCATCATATCTATCTTGATCTTTCTTGGGTCCATGATGACCTaGGCACAGCGGATGATCATC +
Preference number: 5 (lower is better)
Translates to: SPVLSKLPGFIISILIFLGSMMT*AQRMII
Trigger: GATGATCATCCGCTGTGCCAAGGTCATCATGGACCC...AAGAAAGATCAAGATAGATATGATGAAGCCGGGGAGCTTGCTTAAGACAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGGGGAGTGGGACTAAATaGCTATCACCCCCAGACAAT +
Preference number: 5 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQGSGTK*LSPPDN
Trigger: ATTGTCTGGGGGTGATAGCAATTTAGTCCCACTCCC...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTCACGGCACTAAGAATTaGAATCCTCTGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLHGTKN*NPLWMK
Trigger: CTTCATCCACAGAGGATTCAAATTCTTAGTGCCGTG...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GCCACAGAAGGGGGCACTAGCAGTTGTGCTTTACAGGAAGTGTTCCACTTACCCTCTGCTCTAATGATTTaGCTGCAAGGTCATAGATGT +
Preference number: 5 (lower is better)
Translates to: ATEGGTSSCALQEVFHLPSALMI*LQGHRC
Trigger: ACATCTATGACCTTGCAGCAAAATCATTAGAGCAGA...GGGTAAGTGGAACACTTCCTGTAAAGCACAACTGCTAGTGCCCCCTTCTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCGGCCTTCCCTGCATCTaGGTTCACTGCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: LFPVAIKQESRDKVKPISGLPCI*VHCLCQ
Trigger: CTGGCAAAGGCAGTGAACCAAGATGCAGGGAAGGCC...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGAAGTGTTCCACTTACCCGGGACTGGCTACATTATGATTTAAGTTGCAGGAGGCTTGCCAGAAACGAGTaGAGACGCTCTGATCACAAA +
Preference number: 5 (lower is better)
Translates to: GSVPLTRDWLHYDLSCRRLARNE*RRSDHK
Trigger: TTTGTGATCAGAGCGTCTCAACTCGTTTCTGGCAAG...CCTCCTGCAACTTAAATCATAATGTAGCCAGTCCCGGGTAAGTGGAACACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GAGATTGGAGGGCAGGAGGCAAGAGGTCAAGGTATTTATTCCCCCAGCTCTCTTAGATTCTTGCTTATGTaGCCAGGCTGGTTTCAAACT +
Preference number: 5 (lower is better)
Translates to: EIGGQEARGQGIYSPSSLRFLLM*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCAACATAAGCAAGAATCT...AAGAGAGCTGGGGGAATAAATACCTTGACCTCTTGCCTCCTGCCCTCCAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAGCAGCCCTCAGAAGTaGAGAAAAGCTGAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYSSPQK*RKAEGA
Trigger: GGCACCTTCAGCTTTTCTCAACTTCTGAGGGCTGCT...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAAAAGGAAGTAGAGGAATaGGGACTTGGGGCCGGTTTT +
Preference number: 5 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKKEVEE*GLGAGF
Trigger: AAAACCGGCCCCAAGTCCCAATTCCTCTACTTCCTT...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GGTGTCTTCATTGTCCCAAAGACCACTGCTGCAGAGTGGTGGATCATTTATCAGTTGTTTTCCATACCCTaGCCCAACCTCTGTAAATAT +
Preference number: 5 (lower is better)
Translates to: GVFIVPKTTAAEWWIIYQLFSIP*PNLCKY
Trigger: ATATTTACAGAGGTTGGGCAAGGGTATGGAAAACAA...CTGATAAATGATCCACCACTCTGCAGCAGTGGTCTTTGGGACAATGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTAGTAGTGATAGTGCTTaGGAACCCATTTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SECGKELIRTKGFSGSASSSDSA*EPIFQV
Trigger: CACCTGGAAAATGGGTTCCAAAGCACTATCACTACT...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCCAAGCTCCTCAAGTATaGCAGAGGCTGTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LFPVAIKQESRDKVKPISQAPQV*QRLFVL
Trigger: AAGGACAAACAGCCTCTGCAATACTTGAGGAGCTTG...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCTGAGTGTGGAAAAGAATTAATTAGGACCAAGGGATTCTCAGGCAGTGCTTCTTTTTACTGTTCCCTGTaGTTTTCCATACCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SECGKELIRTKGFSGSASFYCSL*FSIPLP
Trigger: GGGCAAGGGTATGGAAAACAACAGGGAACAGTAAAA...AGAAGCACTGCCTGAGAATCCCTTGGTCCTAATTAATTCTTTTCCACACTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp TCTTGGTTGGGAGCCTCCATTGCTACTTTGCATTTAAAGGACCGAGAGTCTCCTCCTTATGTTGAAATATaGGCAGAGAAAGAGATCACT +
Preference number: 5 (lower is better)
Translates to: SWLGASIATLHLKDRESPPYVEI*AEKEIT
Trigger: AGTGATCTCTTTCTCTGCCAATATTTCAACATAAGG...AGGAGACTCTCGGTCCTTTAAATGCAAAGTAGCAATGGAGGCTCCCAACCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCAATTGGAAGATGATCTaGTGCCATCTGGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LFPVAIKQESRDKVKPISNWKMI*CHLGLL
Trigger: AAGGAGCCCCAGATGGCACAAGATCATCTTCCAATT...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCGAAAATTGCTGTTTTTaGGAGGCTTGGGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: LFPVAIKQESRDKVKPISENCCF*EAWVGS
Trigger: ACTCCCAACCCAAGCCTCCAAAAAACAGCAATTTTC...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCCATCACTCTGAACTCTaGGTTCTGCATATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PAILSDNFTELPGEIFKAHHSEL*VLHISA
Trigger: AGCAGAAATATGCAGAACCAAGAGTTCAGAGTGATG...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CTATTTCCTGTTGCCATCAAACAAGAGTCAAGAGATAAGGTGAAACCCATTAGCACAGGCAACCTGTCTTaGTGCTATGATTGGACAGAA +
Preference number: 5 (lower is better)
Translates to: LFPVAIKQESRDKVKPISTGNLS*CYDWTE
Trigger: TTCTGTCCAATCATAGCACAAAGACAGGTTGCCTGT...GCTAATGGGTTTCACCTTATCTCTTGACTCTTGTTTGATGGCAACAGGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAACTGGTTTTTCTTCTTTaGCTCCAGTGTGCTGCCTAT +
Preference number: 5 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKLVFLL*LQCAAY
Trigger: ATAGGCAGCACACTGGAGCAAAAGAAGAAAAACCAG...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCGTGAGGACCTTCTTGTaGCATCATAAACATGGTGGA +
Preference number: 5 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIVRTFL*HHKHGG
Trigger: TCCACCATGTTTATGATGCAACAAGAAGGTCCTCAC...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp CCTGCTATTCTTTCTGATAATTTTACAGAGCTTCCAGGTGAGATCTTCAAGGCCCAAGAACATTCATGTTaGCCCATGTTCTCTCATTTC +
Preference number: 5 (lower is better)
Translates to: PAILSDNFTELPGEIFKAQEHSC*PMFSHF
Trigger: GAAATGAGAGAACATGGGCAAACATGAATGTTCTTG...GGCCTTGAAGATCTCACCTGGAAGCTCTGTAAAATTATCAGAAAGAATAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp ACCACACTAGTGGACACACCAAACTTTGTAGTTCTCTTCACTTGGTGTTTGAAATTAGCTGACTGGGAGTaGGTTCTAGTTTGCATTGTA +
Preference number: 5 (lower is better)
Translates to: TTLVDTPNFVVLFTWCLKLADWE*VLVCIV
Trigger: TACAATGCAAACTAGAACCAACTCCCAGTCAGCTAA...TTTCAAACACCAAGTGAAGAGAACTACAAAGTTTGGTGTGTCCACTAGTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp GTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACAACATCCAGATCTCAACACTGTaGCAATGGGAATCAAGTTTC +
Preference number: 5 (lower is better)
Translates to: VFDVMGKYSCYHMRRYNIQISTL*QWESSF
Trigger: GAAACTTGATTCCCATTGCAACAGTGTTGAGATCTG...GATGTTGTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS-3UTR CAA 90 bp AGAAGAGTGTTTGATGTAATGGGGAAGTATTCCTGCTATCATATGAGGCGATACTGCTACTATTTCCTGTaGCCATCAAACAAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: RRVFDVMGKYSCYHMRRYCYYFL*PSNKSQ
Trigger: TTGACTCTTGTTTGATGGCAACAGGAAATAGTAGCA...GTATCGCCTCATATGATAGCAGGAATACTTCCCCATTACATCAAACACTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 72 bp GCTCGGGCGTGGGCTCCTCCATCTCGCGGCAGCGACTaGGGGCTGCTCCTCCTCCGCCTCGGGTTTGACTGG +
Preference number: 6 (lower is better)
Translates to: ARAWAPPSRGSD*GLLLLRLGFDW
Trigger: CCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACGCCCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 72 bp CCAGTCCCCACAGCCGCTGTGCCTCAGTCGTCCAGGTaGTGCTCCTCCCAGGTGGATGTGGGGATGGCGCTG +
Preference number: 6 (lower is better)
Translates to: PVPTAAVPQSSR*CSSQVDVGMAL
Trigger: CAGCGCCATCCCCACATCCACCTGGGAGGAGCAGCACCTGGACGACTGAGGCACAGCGGCTGTGGGGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 72 bp TGGCCTTTCACTGAGAGCAGGCACTGTGCTGGCTCGTaGGGGCGCTGGAGTGTGACTGGCGAGGCCCGTCCC +
Preference number: 6 (lower is better)
Translates to: WPFTESRHCAGS*GRWSVTGEARP
Trigger: GGGACGGGCCTCGCCAGTCACACTCCAGCGCCCCCACGAGCCAGCACAGTGCCTGCTCTCAGTGAAAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 72 bp GCCCTTTGTCTACGTCGACATAGACGGGCTCGGGCGTaGGCTCCTCCATCTCGCGGCAGCGACTGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: ALCLRRHRRARA*APPSRGSDCGL
Trigger: CAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACGCCCGAGCCCGTCTATGTCGACGTAGACAAAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS GCA 72 bp CGTGGGCTCCTCCATCTCGCGGCAGCGACTGCGGGCTaGTCCTCCTCCGCCTCGGGTTTGACTGGTACCATT +
Preference number: 6 (lower is better)
Translates to: RGLLHLAAATAG*SSSASGLTGTI
Trigger: AATGGTACCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTGCCGCGAGATGGAGGAGCCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS TCA 72 bp CAGCGACTGCGGGCTGCTCCTCCTCCGCCTCGGGTTTaGCTGGTACCATTTTCCACCCCTGCTGACTGGAGT +
Preference number: 6 (lower is better)
Translates to: QRLRAAPPPPRV*LVPFSTPADWS
Trigger: ACTCCAGTCAGCAGGGGTGGAAAATGGTACCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 72 bp GACTGCGGGCTGCTCCTCCTCCGCCTCGGGTTTGACTaGTACCATTTTCCACCCCTGCTGACTGGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: DCGLLLLRLGFD*YHFPPLLTGVV
Trigger: GACCACTCCAGTCAGCAGGGGTGGAAAATGGTACCAGTCAAACCCGAGGCGGAGGAGGAGCAGCCCGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560778.3
CDS CCA 72 bp CGGTCAGGCATCATGGGGGTCACCCAAGGAGAACAGTaGCCTTTCACTGAGAGCAGGCACTGTGCTGGCTCG +
Preference number: 6 (lower is better)
Translates to: RSGIMGVTQGEQ*PFTESRHCAGS
Trigger: CGAGCCAGCACAGTGCCTGCTCTCAGTGAAAGGCCACTGTTCTCCTTGGGTGACCCCCATGATGCCTGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560778.3