RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTXN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000233932

Ensembl transcript IDs: ENST00000417307.3, ENST00000644354.1, ENST00000645050.1, ENST00000647363.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCGACAAACAGAAGAGATAGGAGGGTCAGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTGACTACTTGTAGGCTTTGGGTGTTA +
Preference number: 1 (lower is better)
Translates to: IRQTEEIGGSGLCEI*GALGPVTTCRLWVL
Trigger: TAACACCCAAAGCCTACAAGTAGTCACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCCTGACCCTCCTATCTCTTCTGTTTGTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 90 bp CAATTTTCAGTATGTTCAGTTGAACTTGGCCCAGTGGCCTGTTCTTaGGCCAAGTTACTAACTGGCTATGAGGTGTACCAGGCCTACACT +
Preference number: 1 (lower is better)
Translates to: QFSVCSVELGPVACS*AKLLTGYEVYQAYT
Trigger: AGTGTAGGCCTGGTACACCTCATAGCCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAACTGAACATACTGAAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR TCA 90 bp AAGAGACCTAGTTTCCTGGCACACACAATTTTCAGTATGTTCAGTTaGACTTGGCCCAGTGGCCTGTTCTTGGGCCAAGTTACTAACTGG +
Preference number: 1 (lower is better)
Translates to: KRPSFLAHTIFSMFS*TWPSGLFLGQVTNW
Trigger: CCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAACTGAACATACTGAAAATTGTGTGTGCCAGGAAACTAGGTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 90 bp ATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGGAATCCCAACAATAGTTTATCATTT +
Preference number: 1 (lower is better)
Translates to: MAAAILMLYSLETSK*EQRKVRNPNNSLSF
Trigger: AAATGATAAACTATTGTTGGGATTCCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 90 bp ATCTGGTACTTTAAAAGCCTTGGTCAACAAAGAGACCTAGTTTCCTaGCACACACAATTTTCAGTATGTTCAGTTGAACTTGGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: IWYFKSLGQQRDLVS*HTQFSVCSVELGPV
Trigger: CACTGGGCCAAGTTCAACTGAACATACTGAAAATTGTGTGTGCCAGGAAACTAGGTCTCTTTGTTGACCAAGGCTTTTAAAGTACCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 90 bp CTTGGTTGTAGAGGTCTTTCTTCCTTTGAAATAAAGATCTGGCCTTaGTTTGTTCTAGTCATCAAAATGGAGGGTCTTGGTGGGTGTCTT +
Preference number: 1 (lower is better)
Translates to: LGCRGLSSFEIKIWP*FVLVIKMEGLGGCL
Trigger: AAGACACCCACCAAGACCCTCCATTTTGATGACTAGAACAAACCAAGGCCAGATCTTTATTTCAAAGGAAGAAAGACCTCTACAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 90 bp ATCTATTATGAGATGGAAAGCATCAAGGAATCTCACAGAGACAGCTaGTTTTGGAATTCCATAGACCTGAGCAGTAACCATGCCTATAAG +
Preference number: 1 (lower is better)
Translates to: IYYEMESIKESHRDS*FWNSIDLSSNHAYK
Trigger: CTTATAGGCATGGTTACTGCTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCTGTGAGATTCCTTGATGCTTTCCATCTCATAATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR TCA 90 bp TTATGCTCTATTCATTGGAAACCTCTAAGTGGGAACAGAGGAAAGTaGGGAATCCCAACAATAGTTTATCATTTACACAGCATGGTGAAG +
Preference number: 1 (lower is better)
Translates to: LCSIHWKPLSGNRGK*GIPTIVYHLHSMVK
Trigger: CTTCACCATGCTGTGTAAATGATAAACTATTGTTGGGATTCCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAATGAATAGAGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGGAATGTGGAGGGGATaGCTGGGCTTTTCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPGMWRG*LGFSEG
Trigger: CCCCTCTGAAAAGCCCAGGCATCCCCTCCACATTCC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAAAGCTAAAGGGGTCTaGGTCAGGAATGTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPKAKGV*VRNVEG
Trigger: CCCCTCCACATTCCTGACTCAGACCCCTTTAGCTTT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPLETSK*EQRKVR
Trigger: CCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCAGAATGTGTCCCGATaGCACAACCATAAAAACCAT +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPQNVSR*HNHKNH
Trigger: ATGGTTTTTATGGTTGTGCCATCGGGACACATTCTG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAGTATGAGGCAGATCTaGTTTGGATTCCAAGCTATG +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSMRQI*FGFQAM
Trigger: CATAGCTTGGAATCCAAACCAGATCTGCCTCATACT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAACACTACTCTTCACTaGAGCTCACAGAGATTAGAT +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPNTTLH*SSQRLD
Trigger: ATCTAATCTCTGTGAGCTTCAGTGAAGAGTAGTGTT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTCCACTAGGTCATGCTaGAAACTCCCTTTTAAATTC +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSTRSC*KLPFKF
Trigger: GAATTTAAAAGGGAGTTTCCAGCATGACCTAGTGGA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTTGCTTCTTAGGGTTTaGGAATCTCTATTACTGCTA +
Preference number: 2 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPLLLRV*ESLLLL
Trigger: TAGCAGTAATAGAGATTCTCAAACCCTAAGAAGCAA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGAAAGCTAAAGGGGTCTaGGTCAGGAATGTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGKAKGV*VRNVEG
Trigger: CCCCTCCACATTCCTGACTCAGACCCCTTTAGCTTT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CAA 90 bp ATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAACAGAGGAAAGTGAGGAATCCCAAC +
Preference number: 2 (lower is better)
Translates to: IKMVNMAAAILMLYS*ETSKWEQRKVRNPN
Trigger: GTTGGGATTCCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTACTGGTGGCACAGCTaGGACTGTCTTTGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGYWWHS*DCLCFC
Trigger: GCAGAAACAAAGACAGTCTCAGCTGTGCCACCAGTA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQGLCEI*GALGPV
Trigger: CACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNEGASV*GRSGLD
Trigger: ATCCAAACCAGATCTGCCTCATACTGATGCTCCCTC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATACTGGTGGCACAGCTaGGACTGTCTTTGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQYWWHS*DCLCFC
Trigger: GCAGAAACAAAGACAGTCTCAGCTGTGCCACCAGTA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 2 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACAGAATGTGTCCCGATaGCACAACCATAAAAACCAT +
Preference number: 2 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGQNVSR*HNHKNH
Trigger: ATGGTTTTTATGGTTGTGCCATCGGGACACATTCTG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLETSK*EQRKVR
Trigger: CCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGAGGCAGATCTGGTTTaGATTCCAAGCTATGGGATT +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQEADLV*IPSYGI
Trigger: AATCCCATAGCTTGGAATCCAAACCAGATCTGCCTC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGAGGCAGATCTGGTTTaGATTCCAAGCTATGGGATT +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNEADLV*IPSYGI
Trigger: AATCCCATAGCTTGGAATCCAAACCAGATCTGCCTC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTCTCTGTTTAAGACCTaGCTCACTAAAGCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNSLFKT*LTKAKG
Trigger: CCCTTTAGCTTTAGTGAGTCAGGTCTTAAACAGAGA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATCTCTGTTTAAGACCTaGCTCACTAAAGCTAAAGGG +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQSLFKT*LTKAKG
Trigger: CCCTTTAGCTTTAGTGAGTCAGGTCTTAAACAGAGA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCTTTCCACTAGGTCATaGTGGAAACTCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGLSTRS*WKLPFK
Trigger: TTTAAAAGGGAGTTTCCAGCATGACCTAGTGGAAAG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACAGTATGAGGCAGATCTaGTTTGGATTCCAAGCTATG +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNSMRQI*FGFQAM
Trigger: CATAGCTTGGAATCCAAACCAGATCTGCCTCATACT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAAGTATGAGGCAGATCTaGTTTGGATTCCAAGCTATG +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQSMRQI*FGFQAM
Trigger: CATAGCTTGGAATCCAAACCAGATCTGCCTCATACT...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTCCACTAGGTCATGCTaGAAACTCCCTTTTAAATTC +
Preference number: 2 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGSTRSC*KLPFKF
Trigger: GAATTTAAAAGGGAGTTTCCAGCATGACCTAGTGGA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CAA 90 bp CTCTGGGTTTTCAGATACATTTGTAGCATTCATAGGGCACTAGAATaGAAAAGGATGTTAACACTACTCTTCACTGAAGCTCACAGAGAT +
Preference number: 2 (lower is better)
Translates to: LWVFRYICSIHRALE*KRMLTLLFTEAHRD
Trigger: ATCTCTGTGAGCTTCAGTGAAGAGTAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATGAATGCTACAAATGTATCTGAAAACCCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTA +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDGERAR*LWHSLL
Trigger: TAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCC...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLETSK*EQRKVR
Trigger: CCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAAGAGCAAGATGCCTTTaGCACAGTTTATTAGCACAA +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQRARCL*HSLLAQ
Trigger: TTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCT...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTGGATTCCAAGCTATaGGATTTTACTGCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLDSKL*DFTARD
Trigger: ATCTCTTGCAGTAAAATCCCATAGCTTGGAATCCAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTTGGATTCCAAGCTATaGGATTTTACTGCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNLDSKL*DFTARD
Trigger: ATCTCTTGCAGTAAAATCCCATAGCTTGGAATCCAA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCTTTCCACTAGGTCATaGTGGAAACTCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLSTRS*WKLPFK
Trigger: TTTAAAAGGGAGTTTCCAGCATGACCTAGTGGAAAG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAGAGCAAGATGCCTTTaGCACAGTTTATTAGCACAA +
Preference number: 2 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDRARCL*HSLLAQ
Trigger: TTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGAGAGCAAGATGCCTTaGGCACAGTTTATTAGCACA +
Preference number: 3 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPESKMP*AQFIST
Trigger: TGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTC +
Preference number: 3 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPQLRLS*FLLRVL
Trigger: GAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAGCTATGTAGAAGTGTaGAGGACAGTGTCTAGGGAT +
Preference number: 3 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSYVEV*RTVSRD
Trigger: ATCCCTAGACACTGTCCTCAACACTTCTACATAGCT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR GCA 72 bp GGGATGCCTGGGCTTTTCAGAGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTAGCACAAGAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: GMPGLFRGERAR*LWHSLLAQERK
Trigger: CTTCCTTTCTTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCCTCTGAAAAGCCCAGGCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 72 bp ACAGAAGAGATAGGAGGGTCAGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTGACTACTTGTAGGCTT +
Preference number: 3 (lower is better)
Translates to: TEEIGGSGLCEI*GALGPVTTCRL
Trigger: AAGCCTACAAGTAGTCACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCCTGACCCTCCTATCTCTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR TCA 72 bp CTATTTATGCAAGGGGTAGGGGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGATTCCAAGCTATGGGAT +
Preference number: 3 (lower is better)
Translates to: LFMQGVGEGASV*GRSGLDSKLWD
Trigger: ATCCCATAGCTTGGAATCCAAACCAGATCTGCCTCATACTGATGCTCCCTCCCCTACCCCTTGCATAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTCACCTGTGAACCTTTaGGGCCTATGGTTATTATTA +
Preference number: 3 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSPVNL*GLWLLL
Trigger: TAATAATAACCATAGGCCCAAAAGGTTCACAGGTGA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CCA 72 bp GCCATCCTTATGCTCTATTCATTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGGAATCCCAACAATAGT +
Preference number: 3 (lower is better)
Translates to: AILMLYSLETSK*EQRKVRNPNNS
Trigger: ACTATTGTTGGGATTCCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAGGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGAGAGCAAGATGCCTTaGGCACAGTTTATTAGCACA +
Preference number: 3 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGESKMP*AQFIST
Trigger: TGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAA +
Preference number: 3 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGLMLYS*ETSKWE
Trigger: TTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAA +
Preference number: 3 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLMLYS*ETSKWE
Trigger: TTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTC +
Preference number: 3 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDQLRLS*FLLRVL
Trigger: GAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR TCA 72 bp ATTTTTGTATTTATCTCCTGCTATGTTCCTCCATTCTaGCTCATAGAGAGTCAGAAGTTTGTAGTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: IFVFISCYVPPF*LIESQKFVVGK
Trigger: CTTTCCAACTACAAACTTCTGACTCTCTATGAGTCAGAATGGAGGAACATAGCAGGAGATAAATACAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCGAGATCCGGGTTACTaGGCGCTCGGGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPRDPGY*ALGAFS
Trigger: TGAAAAGGCCCCGAGCGCTCAGTAACCCGGATCTCG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCCAGGCCTACACTCTTaGACCAACTGGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPPGLHS*TNWGTE
Trigger: CTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGCCCGGGGCCACTGGTaGCGACAGCCCGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGARGHW*RQPAPA
Trigger: TGCAGGTGCGGGCTGTCGCCACCAGTGGCCCCGGGC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGGTGCCCGGGGCCACTaGTGGCGACAGCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEGARGH*WRQPAP
Trigger: AGGTGCGGGCTGTCGCCACCAGTGGCCCCGGGCACC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTACAGAGAGCCTCCTTaGGGTGAGGATTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPYREPP*GEDLVQ
Trigger: CTGGACCAAATCCTCACCTCAAGGAGGCTCTCTGTA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPGLCEI*GALGPV
Trigger: CACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCCAGTGGCCTGTTCTTaGGCCAAGTTACTAACTGGC +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPPVACS*AKLLTG
Trigger: GCCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTTGAACTTGGCCCAGTaGCCTGTTCTTGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPLNLAQ*PVLGPS
Trigger: ACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPEGASV*GRSGLD
Trigger: ATCCAAACCAGATCTGCCTCATACTGATGCTCCCTC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTTCAGTATGTTCAGTTaGACTTGGCCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPFSMFS*TWPSGL
Trigger: CAGGCCACTGGGCCAAGTTCAACTGAACATACTGAA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACCAACAAGGCCGAGGTaGCCGGGGCCACTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSPTRPR*PGPLVA
Trigger: CGCCACCAGTGGCCCCGGGCACCTCGGCCTTGTTGG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCAAAATGGAGGGTCTTaGTGGGTGTCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPQNGGS*WVSSLG
Trigger: TCCCAGAGAAGACACCCACCAAGACCCTCCATTTTG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGACACTCATCTTAGCTaGAGAGTTGCCACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPDTHLS*RVATVG
Trigger: ACCTACTGTGGCAACTCTTCAGCTAAGATGAGTGTC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATACAGAGAGCCTCCTTaGGGTGAGGATTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRYREPP*GEDLVQ
Trigger: CTGGACCAAATCCTCACCTCAAGGAGGCTCTCTGTA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRGLCEI*GALGPV
Trigger: CACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCC...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATTGAACTTGGCCCAGTaGCCTGTTCTTGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRLNLAQ*PVLGPS
Trigger: ACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAAGAGCCTCCTTGAGGTaGGGATTTGGTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRRASLR*GFGPED
Trigger: ATCTTCTGGACCAAATCCTCACCTCAAGGAGGCTCT...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCTGGAATCAACTCTTTaGCTTCCATGCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPLESTL*LPCLLP
Trigger: TGGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAGTGCGCGCGCGCGTTTaGAGGAAAACGTGCATGGAT +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIVRARV*RKTCMD
Trigger: ATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCAC...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACCGCCGAAGTACGTGTaGGCGCGCGCGTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQPPKYV*ARAFAG
Trigger: TCCTGCAAACGCGCGCGCGCACACGTACTTCGGCGG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTACTGGCACATTGTTGTaGCTCTTCACAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPTGTLL*LFTVPS
Trigger: AGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGAGGCAGATCTGGTTTaGATTCCAAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPEADLV*IPSYGI
Trigger: AATCCCATAGCTTGGAATCCAAACCAGATCTGCCTC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGGTGGGTGTCTTCTCTaGGAGACAAATGAAACATCT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPGGCLL*ETNETS
Trigger: AGATGTTTCATTTGTCTCCCAGAGAAGACACCCACC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGACAAAATGGAGGGTCTTaGTGGGTGTCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRQNGGS*WVSSLG
Trigger: TCCCAGAGAAGACACCCACCAAGACCCTCCATTTTG...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTCTCTGTTTAAGACCTaGCTCACTAAAGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSLFKT*LTKAKG
Trigger: CCCTTTAGCTTTAGTGAGTCAGGTCTTAAACAGAGA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTGAACTCTCACGCGAGTaGATATTCAAATGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPELSRE*IFKCPF
Trigger: AAAGGGACATTTGAATATGCACTCGCGTGAGAGTTC...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGTGAGACAGAGGACGTaGGCGCCCGCCGAAGTACGT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNVRQRT*APAEVR
Trigger: ACGTACTTCGGCGGGCGCCCACGTCCTCTGTCTCAC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACACTTTTCCCCCGCCTaGCAGCCGCATCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSHFSPA*QPHQQW
Trigger: CCACTGCTGATGCGGCTGCCAGGCGGGGGAAAAGTG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR GCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGGAATGTGGAGGGGATaGCTGGGCTTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEGMWRG*LGFSEG
Trigger: CCCCTCTGAAAAGCCCAGGCATCCCCTCCACATTCC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGGAATGTGGAGGGGATaGCTGGGCTTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGGMWRG*LGFSEG
Trigger: CCCCTCTGAAAAGCCCAGGCATCCCCTCCACATTCC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAGAGCAAGATGCCTTTaGCACAGTTTATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPRARCL*HSLLAQ
Trigger: TTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAGAGGCAGATCTGGTTTaGATTCCAAGCTATGGGATT +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSREADLV*IPSYGI
Trigger: AATCCCATAGCTTGGAATCCAAACCAGATCTGCCTC...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATACCAGTGGCCTGTTCTTaGGCCAAGTTACTAACTGGC +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIPVACS*AKLLTG
Trigger: GCCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGG...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAGGTGGGTGTCTTCTCTaGGAGACAAATGAAACATCT +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRGGCLL*ETNETS
Trigger: AGATGTTTCATTTGTCTCCCAGAGAAGACACCCACC...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAACCAGGCCTACACTCTTaGACCAACTGGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEPGLHS*TNWGTE
Trigger: CTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGG...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCCAGGCCTACACTCTTaGACCAACTGGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGPGLHS*TNWGTE
Trigger: CTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAGTTACTAACTGGCTATaGGGTGTACCAGGCCTACAC +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIVTNWL*GVPGLH
Trigger: GTGTAGGCCTGGTACACCTCATAGCCAGTTAGTAAC...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTCAGTATGTTCAGTTaGACTTGGCCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIFSMFS*TWPSGL
Trigger: CAGGCCACTGGGCCAAGTTCAACTGAACATACTGAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTCTCTGGGAGACAAATaGAACATCTGGTACTTTAAA +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPSLGDK*NIWYFK
Trigger: TTTAAAGTACCAGATGTTTCATTTGTCTCCCAGAGA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAGGAATGTGGAGGGGATaGCTGGGCTTTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSGMWRG*LGFSEG
Trigger: CCCCTCTGAAAAGCCCAGGCATCCCCTCCACATTCC...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTACAGAGAGCCTCCTTaGGGTGAGGATTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGYREPP*GEDLVQ
Trigger: CTGGACCAAATCCTCACCTCAAGGAGGCTCTCTGTA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGACTTTCCACTAGGTCATaGTGGAAACTCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRLSTRS*WKLPFK
Trigger: TTTAAAAGGGAGTTTCCAGCATGACCTAGTGGAAAG...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCTTCATGGTATGTTTTaGAGTTCTGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPLHGMF*SSVFSK
Trigger: CTTTGAAAACACAGAACTGCAAAACATACCATGAAG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGGGCTCTGTGAAATTTaGGGAGCTTTAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGGLCEI*GALGPV
Trigger: CACAGGCCCTAAAGCTCCCCAAATTTCACAGAGCCC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATCCACTAGGTCATGCTaGAAACTCCCTTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRSTRSC*KLPFKF
Trigger: GAATTTAAAAGGGAGTTTCCAGCATGACCTAGTGGA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CAA 72 bp AGCATAGCTCTACTGGTGGCACAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTCTTTCCACTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SIALLVAQLRLS*FLLRVLFPLGH
Trigger: ATGACCTAGTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTGTGCCACCAGTAGAGCTATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACAAAGCTAAAGGGGTCTaGGTCAGGAATGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNKAKGV*VRNVEG
Trigger: CCCCTCCACATTCCTGACTCAGACCCCTTTAGCTTT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEEGASV*GRSGLD
Trigger: ATCCAAACCAGATCTGCCTCATACTGATGCTCCCTC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGEGASV*GRSGLD
Trigger: ATCCAAACCAGATCTGCCTCATACTGATGCTCCCTC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAATACTGGTGGCACAGCTaGGACTGTCTTTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEYWWHS*DCLCFC
Trigger: GCAGAAACAAAGACAGTCTCAGCTGTGCCACCAGTA...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATACTGGTGGCACAGCTaGGACTGTCTTTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGYWWHS*DCLCFC
Trigger: GCAGAAACAAAGACAGTCTCAGCTGTGCCACCAGTA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAAGAGCCTCCTTGAGGTaGGGATTTGGTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLERASLR*GFGPED
Trigger: ATCTTCTGGACCAAATCCTCACCTCAAGGAGGCTCT...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGAGCCTCCTTGAGGTaGGGATTTGGTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGRASLR*GFGPED
Trigger: ATCTTCTGGACCAAATCCTCACCTCAAGGAGGCTCT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGTTACTAACTGGCTATaGGGTGTACCAGGCCTACAC +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGVTNWL*GVPGLH
Trigger: GTGTAGGCCTGGTACACCTCATAGCCAGTTAGTAAC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGTTACTAACTGGCTATaGGGTGTACCAGGCCTACAC +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEVTNWL*GVPGLH
Trigger: GTGTAGGCCTGGTACACCTCATAGCCAGTTAGTAAC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTTCAGTATGTTCAGTTaGACTTGGCCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGFSMFS*TWPSGL
Trigger: CAGGCCACTGGGCCAAGTTCAACTGAACATACTGAA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATCTCTGGGAGACAAATaGAACATCTGGTACTTTAAA +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRSLGDK*NIWYFK
Trigger: TTTAAAGTACCAGATGTTTCATTTGTCTCCCAGAGA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATACGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIGERAR*LWHSLL
Trigger: TAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCC...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTILETSK*EQRKVR
Trigger: CCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCCAGTGGCCTGTTCTTaGGCCAAGTTACTAACTGGC +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNPVACS*AKLLTG
Trigger: GCCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTTGAACTTGGCCCAGTaGCCTGTTCTTGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNLNLAQ*PVLGPS
Trigger: ACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGCAGGAAAACGTGCATaGATTTCTTCGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGAGKRA*ISSVWQ
Trigger: CTGCCACACCGAAGAAATCCATGCACGTTTTCCTGC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGACACTCATCTTAGCTaGAGAGTTGCCACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGDTHLS*RVATVG
Trigger: ACCTACTGTGGCAACTCTTCAGCTAAGATGAGTGTC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAGAGGGAGCATCAGTATaGGGCAGATCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSEGASV*GRSGLD
Trigger: ATCCAAACCAGATCTGCCTCATACTGATGCTCCCTC...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAAGAGCCTCCTTGAGGTaGGGATTTGGTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSRASLR*GFGPED
Trigger: ATCTTCTGGACCAAATCCTCACCTCAAGGAGGCTCT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGTTACTAACTGGCTATaGGGTGTACCAGGCCTACAC +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQVTNWL*GVPGLH
Trigger: GTGTAGGCCTGGTACACCTCATAGCCAGTTAGTAAC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTCAGTATGTTCAGTTaGACTTGGCCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQFSMFS*TWPSGL
Trigger: CAGGCCACTGGGCCAAGTTCAACTGAACATACTGAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAGAACTCTCACGCGAGTaGATATTCAAATGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIELSRE*IFKCPF
Trigger: AAAGGGACATTTGAATATGCACTCGCGTGAGAGTTC...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGACTTCATGGTATGTTTTaGAGTTCTGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRLHGMF*SSVFSK
Trigger: CTTTGAAAACACAGAACTGCAAAACATACCATGAAG...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCAGTGTGTAAATATTTaGGCTCGCGTGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGQCVNI*ARVCLW
Trigger: CCACAGACACACGCGAGCGCAAATATTTACACACTG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCCAGACCTTAGGATCTaGCAGAATCCACCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNPDLRI*QNPPLN
Trigger: GTTTAGGGGTGGATTCTGGCAGATCCTAAGGTCTGG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACAAAATGGAGGGTCTTaGTGGGTGTCTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSQNGGS*WVSSLG
Trigger: TCCCAGAGAAGACACCCACCAAGACCCTCCATTTTG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGACACTCATCTTAGCTaGAGAGTTGCCACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQDTHLS*RVATVG
Trigger: ACCTACTGTGGCAACTCTTCAGCTAAGATGAGTGTC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGACACTCATCTTAGCTaGAGAGTTGCCACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNDTHLS*RVATVG
Trigger: ACCTACTGTGGCAACTCTTCAGCTAAGATGAGTGTC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAAACACTACTCTTCACTaGAGCTCACAGAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTINTTLH*SSQRLD
Trigger: ATCTAATCTCTGTGAGCTTCAGTGAAGAGTAGTGTT...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGACTCTTTGCCTGGAATaGATTGAACAGTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGTLCLE*IEQSGC
Trigger: ACACCCAGACTGTTCAATTCATTCCAGGCAAAGAGT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGGERAR*LWHSLL
Trigger: TAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATACTTTCCACTAGGTCATaGTGGAAACTCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTILSTRS*WKLPFK
Trigger: TTTAAAAGGGAGTTTCCAGCATGACCTAGTGGAAAG...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGTTTGCAGGAAAACGTaGATGGATTTCTTCGGTGTG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGVCRKT*MDFFGV
Trigger: CACACCGAAGAAATCCATGCACGTTTTCCTGCAAAC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTTGGAAACCTCTAAGTaGGAACAGAGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGLETSK*EQRKVR
Trigger: CCTCACTTTCCTCTGTTCCCACTTAGAGGTTTCCAA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGAGACAGCTGGTTTTaGAATTCCATAGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGRDSWF*NSIDLS
Trigger: GCTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTTGAACTTGGCCCAGTaGCCTGTTCTTGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLNLAQ*PVLGPS
Trigger: ACTTGGCCCAAGAACAGGCCACTGGGCCAAGTTCAA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAAGAGACCTAGTTTCCTaGCACACACAATTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIRDLVS*HTQFSV
Trigger: TACTGAAAATTGTGTGTGCCAGGAAACTAGGTCTCT...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGGTGGGTGTCTTCTCTaGGAGACAAATGAAACATCT +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEGGCLL*ETNETS
Trigger: AGATGTTTCATTTGTCTCCCAGAGAAGACACCCACC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATCTCTGTTTAAGACCTaGCTCACTAAAGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGSLFKT*LTKAKG
Trigger: CCCTTTAGCTTTAGTGAGTCAGGTCTTAAACAGAGA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTGCTTCTTAGGGTTTaGGAATCTCTATTACTGCTA +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTILLLRV*ESLLLL
Trigger: TAGCAGTAATAGAGATTCTCAAACCCTAAGAAGCAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACTGGGAAACCTGGTCTaGAAATTCTCCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLGNLV*KFSRYL
Trigger: GAGATATCTGGAGAATTTTCAGACCAGGTTTCCCAG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR TCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACATGGCTCAAGGACTCTaGCACTCAATCCTTCCAACG +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDMAQGL*HSILPT
Trigger: CGTTGGAAGGATTGAGTGTCAGAGTCCTTGAGCCAT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCTGGAATCAACTCTTTaGCTTCCATGCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNLESTL*LPCLLP
Trigger: TGGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS-3UTR GCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACGGCAGCCATCCTTATaGTCTATTCATTGGAAACCT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSRQPSL*SIHWKP
Trigger: AGGTTTCCAATGAATAGAGCATAAGGATGGCTGCCG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNGERAR*LWHSLL
Trigger: TAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAGGGGAGAGAGCAAGATaGCTTTGGCACAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSGERAR*LWHSLL
Trigger: TAATAAACTGTGCCAAAGGCATCTTGCTCTCTCCCC...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGAAGCATCAGCAATCTaGACGTACACAACACTTTTC +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGEASAI*TYTTLF
Trigger: GAAAAGTGTTGTGTACGTGCAGATTGCTGATGCTTC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAACTGGCACATTGTTGTaGCTCTTCACAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSTGTLL*LFTVPS
Trigger: AGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACACTGGCACATTGTTGTaGCTCTTCACAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNTGTLL*LFTVPS
Trigger: AGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGTATGAGGCAGATCTaGTTTGGATTCCAAGCTATG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGSMRQI*FGFQAM
Trigger: CATAGCTTGGAATCCAAACCAGATCTGCCTCATACT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAAGAGACAGCTGGTTTTaGAATTCCATAGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSRDSWF*NSIDLS
Trigger: GCTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTCTCACAGAGACAGCTaGTTTTGGAATTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGSHRDS*FWNSID
Trigger: GTCTATGGAATTCCAAAACCAGCTGTCTCTGTGAGA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAATCTCACAGAGACAGCTaGTTTTGGAATTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLESHRDS*FWNSID
Trigger: GTCTATGGAATTCCAAAACCAGCTGTCTCTGTGAGA...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGGTGGGTGTCTTCTCTaGGAGACAAATGAAACATCT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNGGCLL*ETNETS
Trigger: AGATGTTTCATTTGTCTCCCAGAGAAGACACCCACC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAACACTACTCTTCACTaGAGCTCACAGAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGNTTLH*SSQRLD
Trigger: ATCTAATCTCTGTGAGCTTCAGTGAAGAGTAGTGTT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGAACTCTCACGCGAGTaGATATTCAAATGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQELSRE*IFKCPF
Trigger: AAAGGGACATTTGAATATGCACTCGCGTGAGAGTTC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGCTATGGGATTTTACTaGAAGAGATTCGACAAACAG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGAMGFY*KRFDKQ
Trigger: CTGTTTGTCGAATCTCTTGCAGTAAAATCCCATAGC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACTTTCCACTAGGTCATaGTGGAAACTCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGLSTRS*WKLPFK
Trigger: TTTAAAAGGGAGTTTCCAGCATGACCTAGTGGAAAG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGGACTGTCTTTGTTTCTaGTTAGAGTACTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGDCLCF*LEYSFH
Trigger: GTGGAAAGAGTACTCTAAGCAGAAACAAAGACAGTC...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTTACACTAAGCCATTaGTTCTTAGGGTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIFTLSH*FLGFEN
Trigger: ATTCTCAAACCCTAAGAAGCAATGGCTTAGTGTAAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACTGGAATCAACTCTTTaGCTAGATGTCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGLESTL*LDVFIM
Trigger: CATGATGAAGACATCTAGGCAAAGAGTTGATTCCAG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACAGAATGTGTCCCGATaGCACAACCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSQNVSR*HNHKNH
Trigger: ATGGTTTTTATGGTTGTGCCATCGGGACACATTCTG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGAGAGCAAGATGCCTTTaGCACAGTTTATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGRARCL*HSLLAQ
Trigger: TTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTCTCACAGAGACAGCTaGTTTTGGAATTCCATAGAC +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNSHRDS*FWNSID
Trigger: GTCTATGGAATTCCAAAACCAGCTGTCTCTGTGAGA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAAGAGACCTAGTTTCCTaGCACACACAATTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLERDLVS*HTQFSV
Trigger: TACTGAAAATTGTGTGTGCCAGGAAACTAGGTCTCT...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAATAAAGATCTGGCCTTaGTTTGTTCTAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIIKIWP*FVLVIK
Trigger: TTTGATGACTAGAACAAACCAAGGCCAGATCTTTAT...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTTGAAATAAAGATCTaGCCTTGGTTTGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIFEIKI*PWFVLV
Trigger: GACTAGAACAAACCAAGGCCAGATCTTTATTTCAAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATGGATTTCTTCGGTGTaGCAGTGTGTAAATATTTGC +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGWISSV*QCVNIC
Trigger: GCAAATATTTACACACTGCCACACCGAAGAAATCCA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAAAGAGAATCTTTGGATaGCTCAAGGACTCTGACACT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSKRIFG*LKDSDT
Trigger: AGTGTCAGAGTCCTTGAGCCATCCAAAGATTCTCTT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAAACACTACTCTTCACTaGAGCTCACAGAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSNTTLH*SSQRLD
Trigger: ATCTAATCTCTGTGAGCTTCAGTGAAGAGTAGTGTT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTTGCTTCTTAGGGTTTaGGAATCTCTATTACTGCTA +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGLLLRV*ESLLLL
Trigger: TAGCAGTAATAGAGATTCTCAAACCCTAAGAAGCAA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATCTCTGGGAGACAAATaGAACATCTGGTACTTTAAA +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGSLGDK*NIWYFK
Trigger: TTTAAAGTACCAGATGTTTCATTTGTCTCCCAGAGA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACACTGGCACATTGTTGTaGCTCTTCACAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDTGTLL*LFTVPS
Trigger: AGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACAGAGCAAGATGCCTTTaGCACAGTTTATTAGCACAA +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNRARCL*HSLLAQ
Trigger: TTGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAATTGGATTCCAAGCTATaGGATTTTACTGCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RIKMVNMAAAILMLYSLELDSKL*DFTARD
Trigger: ATCTCTTGCAGTAAAATCCCATAGCTTGGAATCCAA...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAGAGACAGCTGGTTTTaGAATTCCATAGACCTGAGC +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDRDSWF*NSIDLS
Trigger: GCTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACACGCACTGGGAAACCTaGTCTGAAAATTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDTHWET*SENSPD
Trigger: ATCTGGAGAATTTTCAGACCAGGTTTCCCAGTGCGT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACATCCTTCCAACGCACTaGGAAACCTGGTCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDILPTH*ETWSEN
Trigger: ATTTTCAGACCAGGTTTCCCAGTGCGTTGGAAGGAT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTGCTTCTTAGGGTTTaGGAATCTCTATTACTGCTA +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLLLRV*ESLLLL
Trigger: TAGCAGTAATAGAGATTCTCAAACCCTAAGAAGCAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR TCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATCTCTGGGAGACAAATaGAACATCTGGTACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQSLGDK*NIWYFK
Trigger: TTTAAAGTACCAGATGTTTCATTTGTCTCCCAGAGA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACTTCATGGTATGTTTTaGAGTTCTGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGLHGMF*SSVFSK
Trigger: CTTTGAAAACACAGAACTGCAAAACATACCATGAAG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAGTATGAGGCAGATCTaGTTTGGATTCCAAGCTATG +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDSMRQI*FGFQAM
Trigger: CATAGCTTGGAATCCAAACCAGATCTGCCTCATACT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGATAAAGATCTGGCCTTaGTTTGTTCTAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGIKIWP*FVLVIK
Trigger: TTTGATGACTAGAACAAACCAAGGCCAGATCTTTAT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAAATCAACTCTTTGCCTaGAATGAATTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSNQLFA*NELNSL
Trigger: CAGACTGTTCAATTCATTCCAGGCAAAGAGTTGATT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTCCTACAAAACATTATaGGAGAAGCATCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNSYKTL*EKHQQS
Trigger: AGATTGCTGATGCTTCTCCCATAATGTTTTGTAGGA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR GCA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTTACACTAAGCCATTaGTTCTTAGGGTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSILLKTCRMGFLILVVQFTLSH*FLGFEN
Trigger: ATTCTCAAACCCTAAGAAGCAATGGCTTAGTGTAAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTTACACTAAGCCATTaGTTCTTAGGGTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSFTLSH*FLGFEN
Trigger: ATTCTCAAACCCTAAGAAGCAATGGCTTAGTGTAAA...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTCCACTAGGTCATGCTaGAAACTCCCTTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDSTRSC*KLPFKF
Trigger: GAATTTAAAAGGGAGTTTCCAGCATGACCTAGTGGA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAGAGACCTAGTTTCCTaGCACACACAATTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDRDLVS*HTQFSV
Trigger: TACTGAAAATTGTGTGTGCCAGGAAACTAGGTCTCT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCAATAAAGATCTGGCCTTaGTTTGTTCTAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSIKIWP*FVLVIK
Trigger: TTTGATGACTAGAACAAACCAAGGCCAGATCTTTAT...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTTGAAATAAAGATCTaGCCTTGGTTTGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSFEIKI*PWFVLV
Trigger: GACTAGAACAAACCAAGGCCAGATCTTTATTTCAAA...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTTTGAAATAAAGATCTaGCCTTGGTTTGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNFEIKI*PWFVLV
Trigger: GACTAGAACAAACCAAGGCCAGATCTTTATTTCAAA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTTGGATTCCAAGCTATaGGATTTTACTGCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLDSKL*DFTARD
Trigger: ATCTCTTGCAGTAAAATCCCATAGCTTGGAATCCAA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
3UTR CAA 72 bp TTCAGATACATTTGTAGCATTCATAGGGCACTAGAATaGAAAAGGATGTTAACACTACTCTTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FRYICSIHRALE*KRMLTLLFTEA
Trigger: AGCTTCAGTGAAGAGTAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATGAATGCTACAAATGTATCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTTTACACTAAGCCATTaGTTCTTAGGGTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDFTLSH*FLGFEN
Trigger: ATTCTCAAACCCTAAGAAGCAATGGCTTAGTGTAAA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR GCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCTTCATGGTATGTTTTaGAGTTCTGTGTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLHGMF*SSVFSK
Trigger: CTTTGAAAACACAGAACTGCAAAACATACCATGAAG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CCA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACATAAAGATCTGGCCTTaGTTTGTTCTAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDIKIWP*FVLVIK
Trigger: TTTGATGACTAGAACAAACCAAGGCCAGATCTTTAT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS TCA 90 bp TCCCAGTCACCCAGTCTCGACCGGTTCTCGCGAGATCCGGGTTACTaGGCGCTCGGGGCCTTTTCAAATCGGGATCCGTTACCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SQSPSLDRFSRDPGY*ALGAFSNRDPLPLP
Trigger: GGGAAGCGGTAACGGATCCCGATTTGAAAAGGCCCCGAGCGCTCAGTAACCCGGATCTCGCGAGAACCGGTCGAGACTGGGTGACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS GCA 90 bp CAGAGGACGTGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTaGAGGAAAACGTGCATGGATTTCTTCGGTGTGGCAGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QRTWAPAEVRVRARV*RKTCMDFFGVAVCK
Trigger: TTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTACTTCGGCGGGCGCCCACGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS GCA 90 bp GCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTaGATGGATTTCTTCGGTGTGGCAGTGTGTAAATATTTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: APAEVRVRARVCRKT*MDFFGVAVCKYLRS
Trigger: CGAGCGCAAATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTACTTCGGCGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACCCCGGCAGCCGCCATaGTCGCGCTCGGAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGPRQPP*SRSEPL
Trigger: GAGGGGCTCCGAGCGCGACAATGGCGGCTGCCGGGG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCCCAGTGGCCTGTTCTaGGGCCAAGTTACTAACTGG +
Preference number: 5 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPPSGLF*GQVTNW
Trigger: CCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGACCCAGTGGCCTGTTCTaGGGCCAAGTTACTAACTGG +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRPSGLF*GQVTNW
Trigger: CCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGG...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTCAGAGACAGCTGGTTTaGGAATTCCATAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPQRQLV*EFHRPE
Trigger: CTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCTG...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTTATGTTCAGTTGAACTaGGCCCAGTGGCCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPYVQLN*AQWPVL
Trigger: AAGAACAGGCCACTGGGCCAAGTTCAACTGAACATA...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAATGTCTAATCCCGCTTaGCAAGCGAAGACTCCACTG +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRMSNPA*QAKTPL
Trigger: CAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACAT...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS GCA 90 bp GGAAAACGTGCATGGATTTCTTCGGTGTGGCAGTGTGTAAATATTTaGGCTCGCGTGTGTCTGTGGCAGCATCTGTGTGTGTATGTGAGA +
Preference number: 5 (lower is better)
Translates to: GKRAWISSVWQCVNI*ARVCLWQHLCVYVR
Trigger: TCTCACATACACACACAGATGCTGCCACAGACACACGCGAGCGCAAATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATTTCAGTATGTTCAGTaGAACTTGGCCCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRFQYVQ*NLAQWP
Trigger: AGGCCACTGGGCCAAGTTCAACTGAACATACTGAAA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATGTGCGCGCGCGCGTTaGCAGGAAAACGTGCATGGA +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGCARAR*QENVHG
Trigger: TCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAACCAGGCCTACACTCTaGAACCAACTGGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTITRPTL*NQLGYR
Trigger: TCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGT...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATGAGGTGTACCAGGCCTACACTCTTGAACCAACTGGGGTACAGAGAGCCTCCTAAAAGCTTATGGGAGTaGAACTTCCAGAAACAATGC +
Preference number: 5 (lower is better)
Translates to: MRCTRPTLLNQLGYREPPKSLWE*NFQKQC
Trigger: GCATTGTTTCTGGAAGTTCAACTCCCATAAGCTTTT...AGGAGGCTCTCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGTACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS TCA 90 bp CTTCTGGAATCAACTCTTTGCCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTTTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLESTLCLPCLLPWR*SPASRLKCWHVCLC
Trigger: ACACAGACAAACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACCCAGTGGCCTGTTCTaGGGCCAAGTTACTAACTGG +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGPSGLF*GQVTNW
Trigger: CCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATAGCAGTGTGTAAATATTaGCGCTCGCGTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIAVCKY*RSRVSV
Trigger: CACAGACACACGCGAGCGCAAATATTTACACACTGC...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGACCAGGCCTACACTCTaGAACCAACTGGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGTRPTL*NQLGYR
Trigger: TCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACCCAGTGGCCTGTTCTaGGGCCAAGTTACTAACTGG +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSPSGLF*GQVTNW
Trigger: CCAGTTAGTAACTTGGCCCAAGAACAGGCCACTGGG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATATTTCAGTATGTTCAGTaGAACTTGGCCCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIFQYVQ*NLAQWP
Trigger: AGGCCACTGGGCCAAGTTCAACTGAACATACTGAAA...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAAAAAGCTTATGGGAGTaGAACTTCCAGAAACAATGC +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRKSLWE*NFQKQC
Trigger: GCATTGTTTCTGGAAGTTCAACTCCCATAAGCTTTT...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGAATCATTCTGCGTTGTTaGTTTCCAGGTCTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRIILRC*FPGLFL
Trigger: TAGAAAGAGACCTGGAAACAAACAACGCAGAATGAT...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATCTGGAATCAACTCTTaGCCTAGATGTCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRSGINS*PRCLHH
Trigger: ATGATGAAGACATCTAGGCAAAGAGTTGATTCCAGA...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS GCA 90 bp ATGCATAAATTTCAGGGCTTTCCAGAGATCCCAGACCTTAGGATCTaGCAGAATCCACCCCTAAACCCTCAGATTTCAACCTTAAGAGAA +
Preference number: 5 (lower is better)
Translates to: MHKFQGFPEIPDLRI*QNPPLNPQISTLRE
Trigger: TTCTCTTAAGGTTGAAATCTGAGGGTTTAGGGGTGGATTCTGGCAGATCCTAAGGTCTGGGATCTCTGGAAAGCCCTGAAATTTATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CAA 90 bp ACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATGGCACAACCATACAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: TLKVVTIVSRMCPDGTTIQLRLS*FLLRVL
Trigger: GAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTG...TATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp GCCTCTCTCCCACACCCTCAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGACATAGGGCACTAGAATaGAAAAGGATGTTAACACTA +
Preference number: 5 (lower is better)
Translates to: ASLPHPQGSYNCIQNVSRHRALE*KRMLTL
Trigger: TAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATG...TCGGGACACATTCTGGATACAATTGTAACTACCTTGAGGGTGTGGGAGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACACCAGGCCTACACTCTaGAACCAACTGGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNTRPTL*NQLGYR
Trigger: TCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGAAATGTCTGTGTCTGTaGGTGAGACAGAGGACGTGG +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGKCLCL*VRQRTW
Trigger: CCACGTCCTCTGTCTCACCAACAGACACAGACATTT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATCTGGAATCAACTCTTaGCCTTCCATGCTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGSGINS*PSMLVA
Trigger: GGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAGA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTATGTTCAGTTGAACTaGGCCCAGTGGCCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGYVQLN*AQWPVL
Trigger: AAGAACAGGCCACTGGGCCAAGTTCAACTGAACATA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAATATGTTCAGTTGAACTaGGCCCAGTGGCCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEYVQLN*AQWPVL
Trigger: AAGAACAGGCCACTGGGCCAAGTTCAACTGAACATA...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGATTTCAGTATGTTCAGTaGAACTTGGCCCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGFQYVQ*NLAQWP
Trigger: AGGCCACTGGGCCAAGTTCAACTGAACATACTGAAA...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACTGGGTGTTAGGGCTTaGATGTCTAATCCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSLGVRA*MSNPAL
Trigger: CAAAGCGGGATTAGACATCAAAGCCCTAACACCCAG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATCTGGAATCAACTCTTaGCCTTCCATGCTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSSGINS*PSMLVA
Trigger: GGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAGA...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAGAGAGCAAGATGCCTTaGGCACAGTTTATTAGCACA +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGESKMP*AQFIST
Trigger: TGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTC...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAACAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEQLRLS*FLLRVL
Trigger: GAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTG...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGAGCTATGTAGAAGTGTaGAGGACAGTGTCTAGGGAT +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGSYVEV*RTVSRD
Trigger: ATCCCTAGACACTGTCCTCAACACTTCTACATAGCT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGCTATGTAGAAGTGTaGAGGACAGTGTCTAGGGAT +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGSYVEV*RTVSRD
Trigger: ATCCCTAGACACTGTCCTCAACACTTCTACATAGCT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACAGAGACAGCTGGTTTaGGAATTCCATAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQQRQLV*EFHRPE
Trigger: CTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCTG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACACCAGGCCTACACTCTaGAACCAACTGGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDTRPTL*NQLGYR
Trigger: TCTGTACCCCAGTTGGTTCAAGAGTGTAGGCCTGGT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATATGTTCAGTTGAACTaGGCCCAGTGGCCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSYVQLN*AQWPVL
Trigger: AAGAACAGGCCACTGGGCCAAGTTCAACTGAACATA...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAGGGTCTAGCAGGATTTaGAAGCATCGGATAATAAGA +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEGSSRI*KHRIIR
Trigger: TCTTATTATCCGATGCTTCAAAATCCTGCTAGACCC...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACGAGAGCAAGATGCCTTaGGCACAGTTTATTAGCACA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNESKMP*AQFIST
Trigger: TGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTC...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGAGAGCAAGATGCCTTaGGCACAGTTTATTAGCACA +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQESKMP*AQFIST
Trigger: TGTGCTAATAAACTGTGCCAAAGGCATCTTGCTCTC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCAGCTGAGACTGTCTTaGTTTCTGCTTAGAGTACTC +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNQLRLS*FLLRVL
Trigger: GAGTACTCTAAGCAGAAACAAAGACAGTCTCAGCTG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTTGCCTGGAATGAATaGAACAGTCTGGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQFAWNE*NSLGVR
Trigger: CCTAACACCCAGACTGTTCAATTCATTCCAGGCAAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATTATTCACTGGCACATaGTTGTGGCTCTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQLFTGT*LWLFTV
Trigger: AACTGTGAAGAGCCACAACAATGTGCCAGTGAATAA...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACTTATTCACTGGCACATaGTTGTGGCTCTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNLFTGT*LWLFTV
Trigger: AACTGTGAAGAGCCACAACAATGTGCCAGTGAATAA...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTATTCACTGGCACATaGTTGTGGCTCTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSLFTGT*LWLFTV
Trigger: AACTGTGAAGAGCCACAACAATGTGCCAGTGAATAA...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAAAGCTGATACTTCGTaGACACTCATCTTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGKADTS*TLILAE
Trigger: TTCAGCTAAGATGAGTGTCAACGAAGTATCAGCTTT...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAAGGGTCTAGCAGGATTTaGAAGCATCGGATAATAAGA +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQGSSRI*KHRIIR
Trigger: TCTTATTATCCGATGCTTCAAAATCCTGCTAGACCC...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAACTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLELMLYS*ETSKWE
Trigger: TTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAG...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGTCACCTGTGAACCTTTaGGGCCTATGGTTATTATTA +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGSPVNL*GLWLLL
Trigger: TAATAATAACCATAGGCCCAAAAGGTTCACAGGTGA...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAATCACCTGTGAACCTTTaGGGCCTATGGTTATTATTA +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLESPVNL*GLWLLL
Trigger: TAATAATAACCATAGGCCCAAAAGGTTCACAGGTGA...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCAGAGACAGCTGGTTTaGGAATTCCATAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDQRQLV*EFHRPE
Trigger: CTCAGGTCTATGGAATTCCAAAACCAGCTGTCTCTG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTTTCAGTATGTTCAGTaGAACTTGGCCCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDFQYVQ*NLAQWP
Trigger: AGGCCACTGGGCCAAGTTCAACTGAACATACTGAAA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGAAAAGCTTATGGGAGTaGAACTTCCAGAAACAATGC +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGKSLWE*NFQKQC
Trigger: GCATTGTTTCTGGAAGTTCAACTCCCATAAGCTTTT...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACATCATCATTCTGCGTaGTTTGTTTCCAGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQHHHSA*FVSRSL
Trigger: AAGAGACCTGGAAACAAACAACGCAGAATGATGATG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACAAAGCTGATACTTCGTaGACACTCATCTTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNKADTS*TLILAE
Trigger: TTCAGCTAAGATGAGTGTCAACGAAGTATCAGCTTT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGATAAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCACTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: KIRIKMVNMAAAILMLYSLMLYS*ETSKWE
Trigger: TTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAG...TGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCTTATGCTCTATTCATaGGAAACCTCTAAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNLMLYS*ETSKWE
Trigger: TTCCCACTTAGAGGTTTCCAATGAATAGAGCATAAG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CATTCATTATATCTAATTGGCCCTCTCAATATTGCTGAAGACATGCAGGATGGGCATAGGGCACTAGAATaGAAAAGGATGTTAACACTA +
Preference number: 5 (lower is better)
Translates to: HSLYLIGPLNIAEDMQDGHRALE*KRMLTL
Trigger: TAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATG...CCCATCCTGCATGTCTTCAGCAATATTGAGAGGGCCAATTAGATATAATGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAACCTTCATGGTATGTTTaGCAGTTCTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLEPSWYV*QFCVFK
Trigger: TTTGAAAACACAGAACTGCAAAACATACCATGAAGG...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AAGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGACCTTCATGGTATGTTTaGCAGTTCTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: KNKDGKHGGSHPYALFIGPSWYV*QFCVFK
Trigger: TTTGAAAACACAGAACTGCAAAACATACCATGAAGG...TCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAGCTATGTAGAAGTGTaGAGGACAGTGTCTAGGGAT +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDSYVEV*RTVSRD
Trigger: ATCCCTAGACACTGTCCTCAACACTTCTACATAGCT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp AGAATAAAGATGGTAAACATGGCGGCAGCCATCCTTATGCTCTATTCATTGGAAAATAAAGATCTGGCCTaGGTTTGTTCTAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: RIKMVNMAAAILMLYSLENKDLA*VCSSHQ
Trigger: TTGATGACTAGAACAAACCAAGGCCAGATCTTTATT...TTCCAATGAATAGAGCATAAGGATGGCTGCCGCCATGTTTACCATCTTTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCTCTTAAGAGAATCTTaGGATGGCTCAAGGACTCTG +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDLLRES*DGSRTL
Trigger: CAGAGTCCTTGAGCCATCCAAAGATTCTCTTAAGAG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACGGGTCTAGCAGGATTTaGAAGCATCGGATAATAAGA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDGSSRI*KHRIIR
Trigger: TCTTATTATCCGATGCTTCAAAATCCTGCTAGACCC...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACCATAGGGCACTAGAATaGAAAAGGATGTTAACACTA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNHRALE*KRMLTL
Trigger: TAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATG...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp CTCTCAATATTGCTGAAGACATGCAGGATGGGTTTCTTAATTCTTGTTGTGCAACCTTCATGGTATGTTTaGCAGTTCTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LSILLKTCRMGFLILVVQPSWYV*QFCVFK
Trigger: TTTGAAAACACAGAACTGCAAAACATACCATGAAGG...TTGCACAACAAGAATTAAGAAACCCATCCTGCATGTCTTCAGCAATATTGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp TGCAGGATGGGTTTCTTAATTCTTGTTGTGCAATATAGGTTCCCTTTAGGTAACAATAAAGATCTGGCCTaGGTTTGTTCTAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: CRMGFLILVVQYRFPLGNNKDLA*VCSSHQ
Trigger: TTGATGACTAGAACAAACCAAGGCCAGATCTTTATT...GTTACCTAAAGGGAACCTATATTGCACAACAAGAATTAAGAAACCCATCCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAAAGCTGATACTTCGTaGACACTCATCTTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDKADTS*TLILAE
Trigger: TTCAGCTAAGATGAGTGTCAACGAAGTATCAGCTTT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACTCACCTGTGAACCTTTaGGGCCTATGGTTATTATTA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDSPVNL*GLWLLL
Trigger: TAATAATAACCATAGGCCCAAAAGGTTCACAGGTGA...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACAAAAGCTTATGGGAGTaGAACTTCCAGAAACAATGC +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDKSLWE*NFQKQC
Trigger: GCATTGTTTCTGGAAGTTCAACTCCCATAAGCTTTT...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCATAGGGCACTAGAATaGAAAAGGATGTTAACACTA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDHRALE*KRMLTL
Trigger: TAGTGTTAACATCCTTTTCAATTCTAGTGCCCTATG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS-3UTR CAA 90 bp ATATTAGTCTTGTTCCTTCATGGTATGTTTTGCAGTTCTGTGTTTTCAAAGGACCCTTCATGGTATGTTTaGCAGTTCTGTGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: ILVLFLHGMFCSSVFSKDPSWYV*QFCVFK
Trigger: TTTGAAAACACAGAACTGCAAAACATACCATGAAGG...GTCCTTTGAAAACACAGAACTGCAAAACATACCATGAAGGAACAAGACTAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS GCA 72 bp GCGGCGGCGGGATGGCGGACGCCAACAAGGCCGAGGTaGCCGGGGCCACTGGTGGCGACAGCCCGCACCTGC +
Preference number: 6 (lower is better)
Translates to: AAAGWRTPTRPR*PGPLVATARTC
Trigger: GCAGGTGCGGGCTGTCGCCACCAGTGGCCCCGGGCACCTCGGCCTTGTTGGCGTCCGCCATCCCGCCGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CCA 72 bp GGACGCCAACAAGGCCGAGGTGCCCGGGGCCACTGGTaGCGACAGCCCGCACCTGCAGCCCGCAGAGCCGCC +
Preference number: 6 (lower is better)
Translates to: GRQQGRGARGHW*RQPAPAARRAA
Trigger: GGCGGCTCTGCGGGCTGCAGGTGCGGGCTGTCGCCACCAGTGGCCCCGGGCACCTCGGCCTTGTTGGCGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CCA 72 bp GGCGGACGCCAACAAGGCCGAGGTGCCCGGGGCCACTaGTGGCGACAGCCCGCACCTGCAGCCCGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: GGRQQGRGARGH*WRQPAPAARRA
Trigger: GGCTCTGCGGGCTGCAGGTGCGGGCTGTCGCCACCAGTGGCCCCGGGCACCTCGGCCTTGTTGGCGTCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CAA 72 bp AATCGGGATCCGTTACCGCTTCCCCGGCAGCCGCCATaGTCGCGCTCGGAGCCCCTCAGCTCAGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: NRDPLPLPRQPP*SRSEPLSSGGR
Trigger: TCGGCCGCCTGAGCTGAGGGGCTCCGAGCGCGACAATGGCGGCTGCCGGGGAAGCGGTAACGGATCCCGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CCA 72 bp CTGGTGCCAAGCGACAGGCGGGCTGGTGGGCAGACATaGCACCACCACCGGGGGCTTTCAGGACTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: LVPSDRRAGGQT*HHHRGLSGLVQ
Trigger: CTGGACCAGTCCTGAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CCA 72 bp GAAGACTCCACTGGTGCCAAGCGACAGGCGGGCTGGTaGGCAGACATGGCACCACCACCGGGGGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: EDSTGAKRQAGW*ADMAPPPGAFR
Trigger: CCTGAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CCA 72 bp AGCGAAGACTCCACTGGTGCCAAGCGACAGGCGGGCTaGTGGGCAGACATGGCACCACCACCGGGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: SEDSTGAKRQAG*WADMAPPPGAF
Trigger: GAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CAA 72 bp GTGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTaGCAGGAAAACGTGCATGGATTTCTTCGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: VGARRSTCARAR*QENVHGFLRCG
Trigger: GCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTACTTCGGCGGGCGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS GCA 72 bp TGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTaGAGGAAAACGTGCATGGATTTCTTCGGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: WAPAEVRVRARV*RKTCMDFFGVA
Trigger: TGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTACTTCGGCGGGCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS GCA 72 bp TGTCTAATCCCGCTTTGCAAGCGAAGACTCCACTGGTaGCAAGCGACAGGCGGGCTGGTGGGCAGACATGGC +
Preference number: 6 (lower is better)
Translates to: CLIPLCKRRLHW*QATGGLVGRHG
Trigger: GCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CCA 72 bp TGTAAATGTCTGTGTCTGTTGGTGAGACAGAGGACGTaGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTT +
Preference number: 6 (lower is better)
Translates to: CKCLCLLVRQRT*APAEVRVRARV
Trigger: AACGCGCGCGCGCACACGTACTTCGGCGGGCGCCCACGTCCTCTGTCTCACCAACAGACACAGACATTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CCA 72 bp GGCGTGTTCTGGAACCTGCGTAGAGTCACAGGGCCCTaGTTAGCGCTTTCCTGGCCTAGAAGTGTAAATGTC +
Preference number: 6 (lower is better)
Translates to: GVFWNLRRVTGP*LALSWPRSVNV
Trigger: GACATTTACACTTCTAGGCCAGGAAAGCGCTAACCAGGGCCCTGTGACTCTACGCAGGTTCCAGAACACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS CAA 72 bp AGTCTGGGTGTTAGGGCTTTGATGTCTAATCCCGCTTaGCAAGCGAAGACTCCACTGGTGCCAAGCGACAGG +
Preference number: 6 (lower is better)
Translates to: SLGVRALMSNPA*QAKTPLVPSDR
Trigger: CCTGTCGCTTGGCACCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CCA 72 bp CTGATCGGTTCAGTAACAAATGTAGAAGGCGTGTTCTaGAACCTGCGTAGAGTCACAGGGCCCTGGTTAGCG +
Preference number: 6 (lower is better)
Translates to: LIGSVTNVEGVF*NLRRVTGPWLA
Trigger: CGCTAACCAGGGCCCTGTGACTCTACGCAGGTTCCAGAACACGCCTTCTACATTTGTTACTGAACCGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS GCA 72 bp GAAGTACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTaGATGGATTTCTTCGGTGTGGCAGTGTGTAAATAT +
Preference number: 6 (lower is better)
Translates to: EVRVRARVCRKT*MDFFGVAVCKY
Trigger: ATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CCA 72 bp TACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTGCATaGATTTCTTCGGTGTGGCAGTGTGTAAATATTTGC +
Preference number: 6 (lower is better)
Translates to: YVCARAFAGKRA*ISSVWQCVNIC
Trigger: GCAAATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGCGCGCGCGCACACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS GCA 72 bp TTTCAGGGCTTTCCAGAGATCCCAGACCTTAGGATCTaGCAGAATCCACCCCTAAACCCTCAGATTTCAACC +
Preference number: 6 (lower is better)
Translates to: FQGFPEIPDLRI*QNPPLNPQIST
Trigger: GGTTGAAATCTGAGGGTTTAGGGGTGGATTCTGGCAGATCCTAAGGTCTGGGATCTCTGGAAAGCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS CCA 72 bp GCGTTTGCAGGAAAACGTGCATGGATTTCTTCGGTGTaGCAGTGTGTAAATATTTGCGCTCGCGTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: AFAGKRAWISSV*QCVNICARVCL
Trigger: CAGACACACGCGAGCGCAAATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCTGCAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CAA 72 bp TGCATGGATTTCTTCGGTGTGGCAGTGTGTAAATATTaGCGCTCGCGTGTGTCTGTGGCAGCATCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: CMDFFGVAVCKY*RSRVSVAASVC
Trigger: ACACACAGATGCTGCCACAGACACACGCGAGCGCAAATATTTACACACTGCCACACCGAAGAAATCCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CAA 90 bp AGGAAAACGTGCATGGATTTCTTCGGTGTGGCAGTGTGTAAATATTaGCGCTCGCGTGTGTCTGTGGCAGCATCTGTGTGTGTATGTGAG +
Preference number: 6 (lower is better)
Translates to: RKTCMDFFGVAVCKY*RSRVSVAASVCVCE
Trigger: CTCACATACACACACAGATGCTGCCACAGACACACGCGAGCGCAAATATTTACACACTGCCACACCGAAGAAATCCATGCACGTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644354.1
CDS CAA 90 bp CAACTCTTTGCCTGGAATGAATTGAACAGTCTGGGTGTTAGGGCTTaGATGTCTAATCCCGCTTTGCAAGCGAAGACTCCACTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: QLFAWNELNSLGVRA*MSNPALQAKTPLVP
Trigger: TGGCACCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACTGTTCAATTCATTCCAGGCAAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS CAA 72 bp GCCTGGAATGAATTGAACAGTCTGGGTGTTAGGGCTTaGATGTCTAATCCCGCTTTGCAAGCGAAGACTCCA +
Preference number: 6 (lower is better)
Translates to: AWNELNSLGVRA*MSNPALQAKTP
Trigger: TGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACTGTTCAATTCATTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645050.1
CDS TCA 72 bp TCAACTCTTTGCCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTT +
Preference number: 6 (lower is better)
Translates to: STLCLPCLLPWR*SPASRLKCWHV
Trigger: AACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGGCAAAGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS CCA 72 bp CACTGGCACATTGTTGTGGCTCTTCACAGTTCCTTCTaGAATCAACTCTTTGCCTTCCATGCTTGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: HWHIVVALHSSF*NQLFAFHACCH
Trigger: ATGGCAACAAGCATGGAAGGCAAAGAGTTGATTCCAGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417307.3
ENST00000644354.1
CDS GCA 72 bp TCAACTCTTTGCCTAGATGTCTTCATCATGGTGAAATaGATAAATTTCAGGGCTTTCCAGAGATCCCAGACC +
Preference number: 6 (lower is better)
Translates to: STLCLDVFIMVK*INFRAFQRSQT
Trigger: GGTCTGGGATCTCTGGAAAGCCCTGAAATTTATGCATTTCACCATGATGAAGACATCTAGGCAAAGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647363.1
CDS CCA 72 bp AGTAGGTACTACTCATTATTCACTGGCACATTGTTGTaGCTCTTCACAGTTCCTTCTGGAATCAACTCTTTG +
Preference number: 6 (lower is better)
Translates to: SRYYSLFTGTLL*LFTVPSGINSL
Trigger: CAAAGAGTTGATTCCAGAAGGAACTGTGAAGAGCCACAACAATGTGCCAGTGAATAATGAGTAGTACCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS CCA 72 bp CAAGGTAGTTACAATTGTATCCAGAATGTGTCCCGATaGCACAACCATAAAAACCATATAGCTGGAACTCTC +
Preference number: 6 (lower is better)
Translates to: QGSYNCIQNVSR*HNHKNHIAGTL
Trigger: GAGAGTTCCAGCTATATGGTTTTTATGGTTGTGCCATCGGGACACATTCTGGATACAATTGTAACTACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS CAA 72 bp GAGGAAGGCATGCTACTATATGGGTCTAGCAGGATTTaGAAGCATCGGATAATAAGAAGTCCCAAGAAGATA +
Preference number: 6 (lower is better)
Translates to: EEGMLLYGSSRI*KHRIIRSPKKI
Trigger: TATCTTCTTGGGACTTCTTATTATCCGATGCTTCAAAATCCTGCTAGACCCATATAGTAGCATGCCTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1
CDS CAA 90 bp TCCCATGTAGAGGAAGGCATGCTACTATATGGGTCTAGCAGGATTTaGAAGCATCGGATAATAAGAAGTCCCAAGAAGATACACAAAATC +
Preference number: 6 (lower is better)
Translates to: SHVEEGMLLYGSSRI*KHRIIRSPKKIHKI
Trigger: GATTTTGTGTATCTTCTTGGGACTTCTTATTATCCGATGCTTCAAAATCCTGCTAGACCCATATAGTAGCATGCCTTCCTCTACATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417307.3
ENST00000644354.1
ENST00000645050.1
ENST00000647363.1