Pregenerated sensors for CTU1 (Homo sapiens)
Ensembl gene IDs: ENSG00000142544Ensembl transcript IDs: ENST00000421832.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTCCCTCAGAGCCTGAAGCCCAGTTCGAGACCCTTCTTCCCTaGGACCTCGAAGTCTGGGGTCCCAGCTTCTTCAGGGTTTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PPPSEPEAQFETLLP*DLEVWGPSFFRVSG Trigger: ACCTGAAACCCTGAAGAAGCTGGGACCCCAGACTTCGAGGTCTCAGGGAAGAAGGGTCTCGAACTGGGCTTCAGGCTCTGAGGGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR TCA 90 bp | TCCACGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTaGCCCCTTCCGACTGGGTGTCTTAGGGCCATTTACCACTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: STTCDIRELWREPSV*PLPTGCLRAIYHFR Trigger: CCTGAAGTGGTAAATGGCCCTAAGACACCCAGTCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR CCA 90 bp | CTCACCCGTGACAGAGATACCAGGAGAGATTCGAGAGGGGATGGGTaGGGGAGGACCAATTCCACGACCTGTGATATTCGAGAGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LTRDRDTRRDSRGDG*GRTNSTTCDIRELW Trigger: CCAAAGCTCTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCTCTCCTGGTATCTCTGTCACGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR GCA 90 bp | CAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCTTCCTCAGCCACAGATaGCTGGGGTCCCCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QPCLQSPRFGERIQPLLTFLSHR*LGSPVP Trigger: TGGGACTGGGGACCCCAGGCATCTGTGGCTGAGGAA...GGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR CCA 90 bp | CGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTGACCCCTTCCGAAACCAGCAGAGGCCCTaGGCAGGAGGTCCCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: RPVIFESFGGSPRCDPFRNQQRP*AGGPQP Trigger: TGGTTGGGGACCTCCTGCCCAGGGCCTCTGCTGGTT...TCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR TCA 90 bp | CAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCTTCAGGGTTTCAGGTaGATGGGCCCCCGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QPCLQSPRFGERIQPLLTLQGFR*MGPRLL Trigger: AAGGAGACGGGGGCCCATTCACCTGAAACCCTGAAG...GGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR TCA 90 bp | GAGATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCAGGGAGCCCTCGGTGTaGCCCCTTCCGACTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: EIREGMGGGGPIPRPVIFREPSV*PLPTGC Trigger: ACACCCAGTCGGAAGGGGTCACACCGAGGGCTCCCT...GAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACTCAGCCACAGATGCCTaGGGTCCCCAGTCCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: TTLPPESKVWGTHPTPPHSATDA*GPQSHF Trigger: GAAGTGGGACTGGGGACCCCAGGCATCTGTGGCTGA...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACGAGACCCTTCTTCCCTaGGACCTCGAAGTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: TTLPPESKVWGTHPTPPHETLLP*DLEVWG Trigger: ACCCCAGACTTCGAGGTCTCAGGGAAGAAGGGTCTC...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR TCA 90 bp | CGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTGACCCCTTCCGATCAGGCTACAGCCAGTaGGACCGTGGTGGAGACGAA | + |
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Preference number: 2 (lower is better) Translates to: RPVIFESFGGSPRCDPFRSGYSQ*DRGGDE Trigger: TTCGTCTCCACCACGGTCTCACTGGCTGTAGCCTGA...TCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR CAA 90 bp | AAGTCACCGACAGGCTCACACAACCCTGCCTCCAGAGTCCAAGGTTaGGGGAACGCATCCAACCCCTCCTCACCCGTGACAGAGATACCA | + |
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Preference number: 2 (lower is better) Translates to: KSPTGSHNPASRVQG*GNASNPSSPVTEIP Trigger: TGGTATCTCTGTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGCCTGTCGGTGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACAGATTCGAGAGGGGATaGGTGGGGGAGGACCAATTC | + |
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Preference number: 2 (lower is better) Translates to: TTLPPESKVWGTHPTPPHRFERG*VGEDQF Trigger: GAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCT...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR TCA 72 bp | AGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTaGTATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RGWVGEDQFHDL*YSRALEGALGV Trigger: CACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR TCA 72 bp | TGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTaGCCCCTTCCGACTGGGTGTCTTAGGGCCATTTAC | + |
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Preference number: 3 (lower is better) Translates to: CDIRELWREPSV*PLPTGCLRAIY Trigger: GTAAATGGCCCTAAGACACCCAGTCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR CCA 72 bp | GACAGAGATACCAGGAGAGATTCGAGAGGGGATGGGTaGGGGAGGACCAATTCCACGACCTGTGATATTCGA | + |
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Preference number: 3 (lower is better) Translates to: DRDTRRDSRGDG*GRTNSTTCDIR Trigger: TCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCTCTCCTGGTATCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGGCACCGCACAGCGCTTaGCCCGAGAGCGGACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PASRVQGLGNASNPSSPVAPHSA*PESGRR Trigger: CCGCCGTCCGCTCTCGGGCCAAGCGCTGTGCGGTGC...CACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | TGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGACGCACCGTGGAGTCCTTaGCGCCCGAGGCGCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: CLQSPRFGERIQPLLTRDAPWSP*RPRRPR Trigger: CCGTGGGCGCCTCGGGCGGCAAGGACTCCACGGTGC...GTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGCGAGCTGCAGTGAGATaGCCAGGCGCGGCGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PASRVQGLGNASNPSSPVRAAVR*PGAAPA Trigger: CGCTGGCGCCGCGCCTGGGCATCTCACTGCAGCTCG...CACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | GCTCACACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCGGAGCCGGCTGTGCTaGGGGCCACGGCGTCCATCG | + |
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Preference number: 4 (lower is better) Translates to: AHTTLPPESKVWGTHPTPRSRLC*GPRRPS Trigger: CGATGGACGCCGTGGCCCGCAGCACAGCCGGCTCCG...AGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | ATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCGAGGCGGAGGGCGGCGCGTaGAGCATGGCAGGAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: IREGMGGGGPIPRPVIFEAEGGA*SMAGGA Trigger: TGCGCCTCCTGCCATGCTGCACGCGCCGCCCTCCGC...CTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | CGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTGACCCCTTCCGACCGGCGAGCACCGTGTaGAGCACCTCGGCCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RPVIFESFGGSPRCDPFRPASTV*STSASK Trigger: CTTCGAGGCCGAGGTGCTGCACACGGTGCTCGCCGG...TCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | GCTCACACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTAGGGAGCCCTCGGTGTaGCCCCTTCCGACTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AHTTLPPESKVWGTHPTPREPSV*PLPTGC Trigger: ACACCCAGTCGGAAGGGGTCACACCGAGGGCTCCCT...AGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCCGGTAGCCACCGATaGCCTCATCGACGGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: TTLPPESKVWGTHPTPPHPGSHR*PHRRPR Trigger: TCGTGGCCGTCGATGAGGGCATCGGTGGCTACCGGG...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | GAGATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCCTGTCACGATGTGCGTaGCTCCCACGCGGCGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: EIREGMGGGGPIPRPVIFLSRCA*LPRGAP Trigger: GGGCGCGCCGCGTGGGAGCCACGCACATCGTGACAG...GAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGCCCGTAGGAAGTTCATaGGCACGGTCTCCGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PASRVQGLGNASNPSSPVPVGSS*ARSPPC Trigger: ACATGGCGGAGACCGTGCTCATGAACTTCCTACGGG...CACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGGAGACCCTTCTTCCCTaGGACCTCGAAGTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PASRVQGLGNASNPSSPVETLLP*DLEVWG Trigger: ACCCCAGACTTCGAGGTCTCAGGGAAGAAGGGTCTC...CACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | CAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCAACTCAGTGCTGGGATaGCCACACTGCCCACCACGC | + |
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Preference number: 4 (lower is better) Translates to: QPCLQSPRFGERIQPLLTNSVLG*PHCPPR Trigger: GCGTGGTGGGCAGTGTGGGCATCCCAGCACTGAGTT...GGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | TGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGACTCAGCCACAGATGCCTaGGGTCCCCAGTCCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: CLQSPRFGERIQPLLTRDSATDA*GPQSHF Trigger: GAAGTGGGACTGGGGACCCCAGGCATCTGTGGCTGA...GTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | GCTCACACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTAACCAGCAGAGGCCCTaGGCAGGAGGTCCCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: AHTTLPPESKVWGTHPTPNQQRP*AGGPQP Trigger: TGGTTGGGGACCTCCTGCCCAGGGCCTCTGCTGGTT...AGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | GAGATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCCTGGGATGCCCACACTaGCCACCACGCGGAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: EIREGMGGGGPIPRPVIFLGCPH*PPRGSL Trigger: CAGGCTTCCGCGTGGTGGGCAGTGTGGGCATCCCAG...GAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | CGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTGACCCCTTCCGATTCCTCAGCCACAGATaGCTGGGGTCCCCAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RPVIFESFGGSPRCDPFRFLSHR*LGSPVP Trigger: TGGGACTGGGGACCCCAGGCATCTGTGGCTGAGGAA...TCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | CGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTCGGTGTGACCCCTTCCGATCGAGAGGGGATGGGTaGGGGAGGACCAATTCCACG | + |
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Preference number: 4 (lower is better) Translates to: RPVIFESFGGSPRCDPFRSRGDG*GRTNST Trigger: CGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGA...TCGGAAGGGGTCACACCGAGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| 3UTR CAA 72 bp | ACAGGCTCACACAACCCTGCCTCCAGAGTCCAAGGTTaGGGGAACGCATCCAACCCCTCCTCACCCGTGACA | + |
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Preference number: 4 (lower is better) Translates to: TGSHNPASRVQG*GNASNPSSPVT Trigger: TGTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACACCCCTCCTCACCCGTaGCAGAGATACCAGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TTLPPESKVWGTHPTPPHTPPHP*QRYQER Trigger: TCTCTCCTGGTATCTCTGTCACGGGTGAGGAGGGGT...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | ATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCGAGCCGGGCAGAACTCAGTaGTGGGATGCCCACACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IREGMGGGGPIPRPVIFEPGRTQ*WDAHTA Trigger: GGCAGTGTGGGCATCCCAGCACTGAGTTCTGCCCGG...CTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR GCA 90 bp | TGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGACAGGCTCACACAACCCTaGCTCCAGAGTCCAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CLQSPRFGERIQPLLTRDRLTQP*LQSPRF Trigger: AAACCTTGGACTCTGGAGGCAGGGTTGTGTGAGCCT...GTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | TGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACCCGTGACCAATTCCACGACCTGTaGTATTCGAGAGCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CLQSPRFGERIQPLLTRDQFHDL*YSRALE Trigger: CTCCAAAGCTCTCGAATATCACAGGTCGTGGAATTG...GTCACGGGTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CCA 90 bp | ATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCGAGCCAGAGTCCAAGGTTTaGGGAACGCATCCAACCCCT | + |
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Preference number: 4 (lower is better) Translates to: IREGMGGGGPIPRPVIFEPESKV*GTHPTP Trigger: AGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGG...CTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACAGGAGAAATGGGACATaGAAGAGGCTAAGTCACCGA | + |
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Preference number: 4 (lower is better) Translates to: TTLPPESKVWGTHPTPPHRRNGT*KRLSHR Trigger: TCGGTGACTTAGCCTCTTTCATGTCCCATTTCTCCT...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR TCA 90 bp | CACCATTTATTGAGCACCTCAACTTCTCTGATCTTCCATTTCCTCCCAGTGGTGCTTCAGGGTTTCAGGTaGATGGGCCCCCGTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: HHLLSTSTSLIFHFLPVVLQGFR*MGPRLL Trigger: AAGGAGACGGGGGCCCATTCACCTGAAACCCTGAAG...CACCACTGGGAGGAAATGGAAGATCAGAGAAGTTGAGGTGCTCAATAAATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGACCAATTCCACGACCTGTGATATTCGAGAGCTTTGGAGGGAGCCCTACGGCGGGGCGGGCATaGCGGGAGGGGTCGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GGGPIPRPVIFESFGGSPTAGRA*REGSAS Trigger: AGAAGCCGACCCCTCCCGCAATGCCCGCCCCGCCGT...AGGGCTCCCTCCAAAGCTCTCGAATATCACAGGTCGTGGAATTGGTCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CAA 90 bp | GATTCGAGAGGGGATGGGTGGGGGAGGACCAATTCCACGACCTGTGATATTCGAGGCACCGCACAGCGCTaGGCCCGAGAGCGGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: DSRGDGWGRTNSTTCDIRGTAQR*ARERTA Trigger: CGCCGTCCGCTCTCGGGCCAAGCGCTGTGCGGTGCC...TCGAATATCACAGGTCGTGGAATTGGTCCTCCCCCACCCATCCCCTCTCGAATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS-3UTR CAA 90 bp | ACAACCCTGCCTCCAGAGTCCAAGGTTTGGGGAACGCATCCAACCCCTCCTCACTCCAGAGTCCAAGGTTaGGGGAACGCATCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: TTLPPESKVWGTHPTPPHSRVQG*GNASNP Trigger: GGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGA...GTGAGGAGGGGTTGGATGCGTTCCCCAAACCTTGGACTCTGGAGGCAGGGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS GCA 72 bp | GCACGGCCGCCAACGCCGCGTCCCGGTAGCCACCGATaGCCTCATCGACGGCCACGAGCTGCAGTGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: ARPPTPRPGSHR*PHRRPRAAVRC Trigger: GCATCTCACTGCAGCTCGTGGCCGTCGATGAGGGCATCGGTGGCTACCGGGACGCGGCGTTGGCGGCCGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS CCA 72 bp | CCATGTCGTCGGCGTTGTGACCTGTCACGATGTGCGTaGCTCCCACGCGGCGCGCCCCTTCCTCCAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCRRRCDLSRCA*LPRGAPLPPAP Trigger: GGGCGCTGGAGGAAGGGGCGCGCCGCGTGGGAGCCACGCACATCGTGACAGGTCACAACGCCGACGACATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS GCA 72 bp | TGCGGGAGGGGTCGGCTTCTCCCGGGCAGAACTCAGTaGTGGGATGCCCACACTGCCCACCACGCGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: CGRGRLLPGRTQ*WDAHTAHHAEA Trigger: GGCTTCCGCGTGGTGGGCAGTGTGGGCATCCCAGCACTGAGTTCTGCCCGGGAGAAGCCGACCCCTCCCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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| CDS CCA 72 bp | GGGAGGGGTCGGCTTCTCCCGGGCAGAACTCAGTGCTaGGATGCCCACACTGCCCACCACGCGGAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRGRLLPGRTQC*DAHTAHHAEAW Trigger: CCAGGCTTCCGCGTGGTGGGCAGTGTGGGCATCCCAGCACTGAGTTCTGCCCGGGAGAAGCCGACCCCTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421832.3 |
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