Pregenerated sensors for CTSG (Homo sapiens)
Ensembl gene IDs: ENSG00000100448Ensembl transcript IDs: ENST00000216336.3, ENST00000552252.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAGGAATTGGTTATTTATACTCTGTGGACGTTTATTAAGGCTCTaGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: MRNWLFILCGRLLRL*QHCGAGLCPREEES Trigger: TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAGAGTATAAATAACCAATTCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| 3UTR CCA 72 bp | TGGTTATTTATACTCTGTGGACGTTTATTAAGGCTCTaGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAA | + |
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Preference number: 3 (lower is better) Translates to: WLFILCGRLLRL*QHCGAGLCPRE Trigger: TTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAGAGTATAAATAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCATCTCCCGGCCTCCGATaGTCTCCCCTGCCTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRLWQHCGAGLCPREEESSPGLR*SPLPQP Trigger: GGGCTGAGGCAGGGGAGATCATCGGAGGCCGGGAGA...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCCCCAGCCGGCCACAGTaGACAGCGTCCCGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: IKALATLWSWPVSPRRRVPSRPQ*TASRVS Trigger: TGAGACCCGGGACGCTGTGCACTGTGGCCGGCTGGG...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCGCTCTGGCAACACTGTaGAGCTGGCCTGTGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: IKALATLWSWPVSPRRRVALATL*SWPVSP Trigger: CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGC...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | CGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAACTCCGGAATCCCCCTTaGAGGCAGCCTTCCGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RLLRLWQHCGAGLCPREELRNPP*RQPSVP Trigger: GGGAACGGAAGGCTGCCTTCAAGGGGGATTCCGGAG...TTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGCGTAGGAACCGAAGATaGGGAGGCACTGCCTATCCC | + |
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Preference number: 4 (lower is better) Translates to: LWTFIKALATLWSWPVSPRRNRR*GGTAYP Trigger: GGGATAGGCAGTGCCTCCGCATCTTCGGTTCCTACG...CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | TGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGGTCTCAGTCCCTCCTaGGCTCTAGGCAGAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: CGRLLRLWQHCGAGLCPRGLSPS*ALGRAT Trigger: AGTGGCTCTGCCTAGAGCCCAGGAGGGACTGAGACC...TCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | CTGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGCCAGGGCAGGAAACTTaGGACCCTGGTGAAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: LWTFIKALATLWSWPVSPPGQET*DPGEDF Trigger: GAAGTCTTCACCAGGGTCTCAAGTTTCCTGCCCTGG...CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | CGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAACTGCCTCAGCCCCAGTaGGTAGGAGAAAGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLLRLWQHCGAGLCPREELPQPQ*VGERPA Trigger: TGCTGGCCTTTCTCCTACCCACTGGGGCTGAGGCAG...TTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCTGTGGGCGCCCAGGGTaGCATTTATATTGCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: IKALATLWSWPVSPRRRVCGRPG*HLYCFP Trigger: GGGGAAGCAATATAAATGTCACCCTGGGCGCCCACA...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | CTGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAACTTGAGACCCTGGTaGAGACTTCTGGAGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: LWTFIKALATLWSWPVSPNLRPW*RLLEEP Trigger: GGGTTCCTCCAGAAGTCTTCACCAGGGTCTCAAGTT...CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCAAAGATGCGGAGGCACTaGCTATCCCTCTGCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRLWQHCGAGLCPREEESKMRRH*LSLCTL Trigger: GAGAGTGCAGAGGGATAGGCAGTGCCTCCGCATCTT...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCAGTGTTTTCCCGTCTCTaGATATTGTGGGCGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRLWQHCGAGLCPREEESVFSRL*ILWAPR Trigger: CCTGGGCGCCCACAATATCCAGAGACGGGAAAACAC...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | TGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGATTGCTTCCCCAGCAATaGGCTGCTGTCAGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: CGRLLRLWQHCGAGLCPRLLPQQ*AAVSTK Trigger: CTTTGTGCTGACAGCAGCTCATTGCTGGGGAAGCAA...TCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGATGGCTCTGCGCGCAGTaGTGTGTTGCTGGGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRWLCAQ*CVAGCF Trigger: AAAACACCCAGCAACACATCACTGCGCGCAGAGCCA...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCACGTTTCGATTCCGTCTaGCTCTTCTGCTCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRLWQHCGAGLCPREEESRFDSV*LFCSAA Trigger: TGCAGCTGAGCAGAAGAGTCAGACGGAATCGAAACG...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | CTGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGCAGGAGTGGCTaGATCTTTCCTGAAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWTFIKALATLWSWPVSPRSRSG*IFPERL Trigger: CAGCCTTTCAGGAAAGATGCAGCCACTCCTGCTTCT...CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAGGAACCCTCCACATCTaGTCTGACCTGCTGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRGTLHI*SDLLDS Trigger: AGAGTCCAGCAGGTCAGAGCAGATGTGGAGGGTTCC...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | CGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAACGCGCAGTGATGTGTTaGTGGGTGTTTTCCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLLRLWQHCGAGLCPREERAVMC*WVFSRL Trigger: GAGACGGGAAAACACCCAGCAACACATCACTGCGCG...TTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | TGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGACTCTGCACTCTCAGCTaGACCTCTCGGAGTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: CGRLLRLWQHCGAGLCPRLCTLS*TSRSVS Trigger: AGATACACTCCGAGAGGTGCAGCTGAGAGTGCAGAG...TCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCTCTAGGCAGAGCCACTaGGTTCACGTTTCGATTCCG | + |
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Preference number: 4 (lower is better) Translates to: IKALATLWSWPVSPRRRVSRQSH*VHVSIP Trigger: CGGAATCGAAACGTGAACCCAGTGGCTCTGCCTAGA...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | TTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGCAACACTGTGGAGCTaGCCTGTGTCCCCGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FIKALATLWSWPVSPRRRATLWS*PVSPRR Trigger: TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGC...TCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | CGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAATTCTGGAGGAACCCCTaGCGACTTTCCATAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RLLRLWQHCGAGLCPREEFWRNP*RLSIGD Trigger: GTCTCCTATGGAAAGTCGTCAGGGGTTCCTCCAGAA...TTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | CTGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGTCTGCTCTGACCTGCTaGACTCTGGATCTGAAGATA | + |
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Preference number: 4 (lower is better) Translates to: LWTFIKALATLWSWPVSPSALTC*TLDLKI Trigger: TATCTTCAGATCCAGAGTCCAGCAGGTCAGAGCAGA...CGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAGCAGTGATGTGTTGCTaGGTGTTTTCCCGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRAVMCC*VFSRLW Trigger: CCAGAGACGGGAAAACACCCAGCAACACATCACTGC...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCACGTTTATTAAGGCTCTaGCAACACTGTGGAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRLWQHCGAGLCPREEESRLLRL*QHCGAG Trigger: GCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACG...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAACATCTGCTCTGACCTaGTGGACTCTGGATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRTSALT*WTLDLK Trigger: CTTCAGATCCAGAGTCCAGCAGGTCAGAGCAGATGT...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGATCCCCAGCAATGAGCTaGTGTCAGCACAAAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRSPAMS*CQHKVF Trigger: GAAGACTTTGTGCTGACAGCAGCTCATTGCTGGGGA...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | TTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGACGTCTCTGGATATTGTaGGCGCCCAGGGTGACATTT | + |
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Preference number: 4 (lower is better) Translates to: FIKALATLWSWPVSPRRRRLWIL*APRVTF Trigger: AAATGTCACCCTGGGCGCCCACAATATCCAGAGACG...TCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | TGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGATCTGATCCAGCAGTTTaGAGCTTCTCATTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CGRLLRLWQHCGAGLCPRSDPAV*SFSLLS Trigger: GGACAACAATGAGAAGCTTCAAACTGCTGGATCAGA...TCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR TCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGATCAGCTGCAATAACATaGTGTCATTCTGGATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRSAAIT*CHSGWS Trigger: GGACCATCCAGAATGACATCATGTTATTGCAGCTGA...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR GCA 90 bp | TGTGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAACTCTTCTGCTCAGCTaGAATAACATGATGTCATTC | + |
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Preference number: 4 (lower is better) Translates to: CGRLLRLWQHCGAGLCPRTLLLS*NNMMSF Trigger: GAATGACATCATGTTATTGCAGCTGAGCAGAAGAGT...TCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CCA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAGTTATTTATACTCTGTaGACGTTTATTAAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TFIKALATLWSWPVSPRRVIYTL*TFIKAL Trigger: CAGAGCCTTAATAAACGTCCACAGAGTATAAATAAC...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CAA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCCCTCCGGAATCCCCCTaGAAGGCAGCCTTCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: IKALATLWSWPVSPRRRVPPESP*KAAFRS Trigger: GGAACGGAAGGCTGCCTTCAAGGGGGATTCCGGAGG...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS TCA 90 bp | TGGGAGGGCCCTGGGGCTCAGCTGTATCCTCTTTCTCAGCAGCTCTaGGCTAGGGATGACAGGGTGGTACTTGCCTTCAGGTTTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: WEGPGAQLYPLSQQL*ARDDRVVLAFRFAS Trigger: GGAAGCAAACCTGAAGGCAAGTACCACCCTGTCATCCCTAGCTCAGAGCTGCTGAGAAAGAGGATACAGCTGAGCCCCAGGGCCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS-3UTR CAA 90 bp | ATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCATGCCGTGGGCCACATaGTTACACAGCAGGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IKALATLWSWPVSPRRRVMPWAT*LHSRGP Trigger: AGGCCCCCTGCTGTGTAACAATGTGGCCCACGGCAT...GACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS TCA 90 bp | TGGTCCGCTGATTATATTGAGGGTGGCGGATGGCTCTGCGCGCAGTaGTGTGTTGCTGGGTGTTTTCCCGTCTCTGGATATTGTGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: WSADYIEGGGWLCAQ*CVAGCFPVSGYCGR Trigger: GCGCCCACAATATCCAGAGACGGGAAAACACCCAGCAACACATCACTGCGCGCAGAGCCATCCGCCACCCTCAATATAATCAGCGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS-3UTR CAA 90 bp | ACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGATCCCGTCTCTGGATATaGTGGGCGCCCAGGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: TFIKALATLWSWPVSPRRSRLWI*WAPRVT Trigger: TGTCACCCTGGGCGCCCACAATATCCAGAGACGGGA...TCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CAA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCAGCGCGCAGTGATGTGTaGCTGGGTGTTTTCCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: LRLWQHCGAGLCPREEESARSDV*LGVFPS Trigger: AGACGGGAAAACACCCAGCAACACATCACTGCGCGC...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS-3UTR CAA 90 bp | TTAAGGCTCTGGCAACACTGTGGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCAGGTCCGCTGATTATATaGAGGGTGGCGGATGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LRLWQHCGAGLCPREEESGPLII*RVADGS Trigger: AGAGCCATCCGCCACCCTCAATATAATCAGCGGACC...TGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216336.3 |
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| CDS CCA 90 bp | GTTATTTATACTCTGTGGACGTTTATTAAGGCTCTGGCAACACTGTaGAGCTGGCCTGTGTCCCCGAGAAGAAGAGTCAGTCACAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VIYTLWTFIKALATL*SWPVSPRRRVSHRG Trigger: CCCCCTGTGACTGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCACAGAGTATAAATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS GCA 90 bp | TTCCCTCCCGCAAAGACTCACTTGGTCTTTCTTTCACCCTTTCATTaGTACAACTCTTCTTTCAGATGGCTCTTCCACCGAAGAGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: FPPAKTHLVFLSPFH*YNSSFRWLFHRRAP Trigger: CGGAGCTCTTCGGTGGAAGAGCCATCTGAAAGAAGAGTTGTAGCAATGAAAGGGTGAAAGAAAGACCAAGTGAGTCTTTGCGGGAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS CCA 90 bp | CTCTTGCTCTTTTTGATCTTATCCTCCTTTCCTCCTCATTTACACTaGCCTGTTCCCTCCCGCAAAGACTCACTTGGTCTTTCTTTCACC | + |
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Preference number: 5 (lower is better) Translates to: LLLFLILSSFPPHLH*PVPSRKDSLGLSFT Trigger: GGTGAAAGAAAGACCAAGTGAGTCTTTGCGGGAGGGAACAGGCCAGTGTAAATGAGGAGGAAAGGAGGATAAGATCAAAAAGAGCAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS CCA 72 bp | GGGTGGCGGATGGCTCTGCGCGCAGTGATGTGTTGCTaGGTGTTTTCCCGTCTCTGGATATTGTGGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: GWRMALRAVMCC*VFSRLWILWAP Trigger: GGGCGCCCACAATATCCAGAGACGGGAAAACACCCAGCAACACATCACTGCGCGCAGAGCCATCCGCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS GCA 72 bp | CACAAATCTGCCTTCGGGGGTCGTAGGAACCGAAGATaGGGAGGCACTGCCTATCCCTCTGCACTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HKSAFGGRRNRR*GGTAYPSALSA Trigger: AGCTGAGAGTGCAGAGGGATAGGCAGTGCCTCCGCATCTTCGGTTCCTACGACCCCCGAAGGCAGATTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS CAA 72 bp | TTGAGGGTGGCGGATGGCTCTGCGCGCAGTGATGTGTaGCTGGGTGTTTTCCCGTCTCTGGATATTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LRVADGSARSDV*LGVFPSLDIVG Trigger: GCCCACAATATCCAGAGACGGGAAAACACCCAGCAACACATCACTGCGCGCAGAGCCATCCGCCACCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS CAA 90 bp | CTGATTATATTGAGGGTGGCGGATGGCTCTGCGCGCAGTGATGTGTaGCTGGGTGTTTTCCCGTCTCTGGATATTGTGGGCGCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LIILRVADGSARSDV*LGVFPSLDIVGAQG Trigger: ACCCTGGGCGCCCACAATATCCAGAGACGGGAAAACACCCAGCAACACATCACTGCGCGCAGAGCCATCCGCCACCCTCAATATAATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS TCA 72 bp | CCTGGGGCTCAGCTGTATCCTCTTTCTCAGCAGCTCTaGGCTAGGGATGACAGGGTGGTACTTGCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGAQLYPLSQQL*ARDDRVVLAFR Trigger: CCTGAAGGCAAGTACCACCCTGTCATCCCTAGCTCAGAGCTGCTGAGAAAGAGGATACAGCTGAGCCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS GCA 72 bp | TTCTCGCACCAGGAACCCTCCACATCTGCTCTGACCTaGTGGACTCTGGATCTGAAGATACGCCATGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSHQEPSTSALT*WTLDLKIRHVG Trigger: CCCTACATGGCGTATCTTCAGATCCAGAGTCCAGCAGGTCAGAGCAGATGTGGAGGGTTCCTGGTGCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS GCA 72 bp | GCACAAAGTCTTCTCGCACCAGGAACCCTCCACATCTaGTCTGACCTGCTGGACTCTGGATCTGAAGATACG | + |
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Preference number: 6 (lower is better) Translates to: AQSLLAPGTLHI*SDLLDSGSEDT Trigger: CGTATCTTCAGATCCAGAGTCCAGCAGGTCAGAGCAGATGTGGAGGGTTCCTGGTGCGAGAAGACTTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS CCA 72 bp | TGGACGTTTATTAAGGCTCTGGCAACACTGTGGAGCTaGCCTGTGTCCCCGAGAAGAAGAGTCAGTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: WTFIKALATLWS*PVSPRRRVSHR Trigger: CCTGTGACTGACTCTTCTTCTCGGGGACACAGGCCAGCTCCACAGTGTTGCCAGAGCCTTAATAAACGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS TCA 72 bp | GATTATATTGAGGGTGGCGGATGGCTCTGCGCGCAGTaGTGTGTTGCTGGGTGTTTTCCCGTCTCTGGATAT | + |
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Preference number: 6 (lower is better) Translates to: DYIEGGGWLCAQ*CVAGCFPVSGY Trigger: ATATCCAGAGACGGGAAAACACCCAGCAACACATCACTGCGCGCAGAGCCATCCGCCACCCTCAATATAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216336.3 ENST00000552252.1 |
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| CDS CAA 72 bp | CTCAGCAGCTCTGAGCTAGGGATGACAGGGTGGTACTaGCCTTCAGGTTTGCTTCCCCAGATTAAGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: LSSSELGMTGWY*PSGLLPQIKLI Trigger: TATCAACTTAATCTGGGGAAGCAAACCTGAAGGCAAGTACCACCCTGTCATCCCTAGCTCAGAGCTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS CAA 90 bp | ATCCTCTTTCTCAGCAGCTCTGAGCTAGGGATGACAGGGTGGTACTaGCCTTCAGGTTTGCTTCCCCAGATTAAGTTGATAAATAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ILFLSSSELGMTGWY*PSGLLPQIKLINSL Trigger: CAGGCTATTTATCAACTTAATCTGGGGAAGCAAACCTGAAGGCAAGTACCACCCTGTCATCCCTAGCTCAGAGCTGCTGAGAAAGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS CAA 72 bp | GAGCTAGGGATGACAGGGTGGTACTTGCCTTCAGGTTaGCTTCCCCAGATTAAGTTGATAAATAGCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ELGMTGWYLPSG*LPQIKLINSLS Trigger: ACTCAGGCTATTTATCAACTTAATCTGGGGAAGCAAACCTGAAGGCAAGTACCACCCTGTCATCCCTAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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| CDS CCA 72 bp | TTTTTGATCTTATCCTCCTTTCCTCCTCATTTACACTaGCCTGTTCCCTCCCGCAAAGACTCACTTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLILSSFPPHLH*PVPSRKDSLGL Trigger: AAGACCAAGTGAGTCTTTGCGGGAGGGAACAGGCCAGTGTAAATGAGGAGGAAAGGAGGATAAGATCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552252.1 |
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