RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTSC (Homo sapiens)

Ensembl gene IDs: ENSG00000109861

Ensembl transcript IDs: ENST00000227266.10, ENST00000393301.5, ENST00000524463.6, ENST00000527018.6, ENST00000528020.2, ENST00000529974.2, ENST00000533865.6, ENST00000533897.2, ENST00000534131.2, ENST00000676529.1, ENST00000676612.1, ENST00000677106.1, ENST00000677208.1, ENST00000677468.1, ENST00000677661.1, ENST00000677796.1, ENST00000677802.1, ENST00000677877.1, ENST00000677976.1, ENST00000678065.1, ENST00000678395.1, ENST00000678464.1, ENST00000678506.1, ENST00000678520.1, ENST00000678554.1, ENST00000678664.1, ENST00000678915.1, ENST00000679032.1, ENST00000679199.1, ENST00000679224.1, ENST00000679297.1

Found 1318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACCCTGGCTATGCCTTCCAGTGCTGTTTCTGTGCCACCATGTGGTaGAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: DPGYAFQCCFCATMW*KDQRYVAACQEVQE
Trigger: TTCCTGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCACAGAAACAGCACTGGAAGGCATAGCCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTaGATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGC +
Preference number: 1 (lower is better)
Translates to: RAAALEVGHQDSFAF*MQIKTPEGTVAARG
Trigger: GCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTaGATTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGC +
Preference number: 1 (lower is better)
Translates to: VQEGSCLGGRSPGLL*ILHANKDSRRDCSC
Trigger: GCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
3UTR GCA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTG +
Preference number: 1 (lower is better)
Translates to: EASFFHQPKILGVLS*NKVWEAAFTALSIL
Trigger: CAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 90 bp CCATGGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTaGAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGT +
Preference number: 1 (lower is better)
Translates to: PWAHDGPTQASSGLH*SLHRNLLHSGTQRS
Trigger: ACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 90 bp GGTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATaGTGCATACTCCTGGAGCCCTACTGCAGTTCAAGGAGGGTAAAA +
Preference number: 1 (lower is better)
Translates to: GMWQHARRSRKPNFK*CILLEPYCSSRRVK
Trigger: TTTTACCCTCCTTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR TCA 90 bp GGTGCCCCAGCTGTTTTTAACAATCCAGTAATCCATCCCAGAGGCTaGGTCAGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAG +
Preference number: 1 (lower is better)
Translates to: GAPAVFNNPVIHPRG*VSAIAHKQNSMISQ
Trigger: CTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACTGACTCAGCCTCTGGGATGGATTACTGGATTGTTAAAAACAGCTGGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 90 bp ACTGGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCG +
Preference number: 1 (lower is better)
Translates to: TGRHTLQFRNWCGCH*YALNCTLISSSADP
Trigger: CGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 90 bp ATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTaGATACTCCTGGAGCCCTACTGCAGTTCAAGGAGGGTAAAAACA +
Preference number: 1 (lower is better)
Translates to: MWQHARRSRKPNFKW*ILLEPYCSSRRVKT
Trigger: TGTTTTTACCCTCCTTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR GCA 90 bp CAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGTTaGAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: QELLGRALQSFSLQS*NVFSLAGSCYSSLW
Trigger: CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
3UTR TCA 90 bp TGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: WRKSSYTSKATAMGP*WTNSSFIRASLQPP
Trigger: TGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR TCA 90 bp GCAGCTAGTATCCCTGGTGATTGCAGATACTCTGGTGGGAAATGCTaGGATTCAGTGCTCGAAGGTGCTCAAAGAGAACTCGGTTTCGAA +
Preference number: 1 (lower is better)
Translates to: AASIPGDCRYSGGKC*DSVLEGAQRELGFE
Trigger: TTCGAAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAATCTCAGCATTTCCCACCAGAGTATCTGCAATCACCAGGGATACTAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR GCA 90 bp CTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTC +
Preference number: 1 (lower is better)
Translates to: LQFRNWCGCHCYALN*TLISSSADPEVAIL
Trigger: GAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 90 bp GGGCACTTCAGTCTTTTTCACTTCAAAGTTGCAATGTCTTTTCCCTaGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTCC +
Preference number: 1 (lower is better)
Translates to: GHFSLFHFKVAMSFP*LGPVTHPCGSLSNS
Trigger: GGAGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAGTGAAAAAGACTGAAGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
3UTR CCA 90 bp AGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACCTATGTTGCCTTaGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTGACG +
Preference number: 1 (lower is better)
Translates to: SPHRCSPILQVPMLP*LFQSFYHACLGFLT
Trigger: CGTCAAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAGAACACCTATGAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR CCA 90 bp CTGGAAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATaGCATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAG +
Preference number: 1 (lower is better)
Translates to: LERDENMLPNHSITA*HESRGTCDMQWEPK
Trigger: CTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATaGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGC +
Preference number: 1 (lower is better)
Translates to: FCSGGSHHILQKQLP*AHDGPTQASSGLHC
Trigger: GCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 90 bp ATCACTCCATTACAGCATGGCATGAAAGCAGAGGTACCTGCGATATaGAATGGGAACCAAAGTTCTGATGTTTCTCACGGTAATAGAGAG +
Preference number: 1 (lower is better)
Translates to: ITPLQHGMKAEVPAI*NGNQSSDVSHGNRE
Trigger: CTCTCTATTACCGTGAGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 90 bp CTCCCACTTATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTTCCTaGATTAGTTTGCTGAGGATAACAGCTTCCAACTCCATCCATGTC +
Preference number: 1 (lower is better)
Translates to: LPLISENMWWLVFCS*ISLLRITASNSIHV
Trigger: GACATGGATGGAGTTGGAAGCTGTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 90 bp ACTCATGAGTCACGTTCAAATTGTTGCCCAAGGCCTTTAAAGGGCTaGCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTC +
Preference number: 1 (lower is better)
Translates to: THESRSNCCPRPLKG*LKFLAVLIGVLPFF
Trigger: GAAGAATGGGAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATTTGAACGTGACTCATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR TCA 90 bp CCACAGGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATaGACATTTCTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTT +
Preference number: 1 (lower is better)
Translates to: PQDAWFRTGLTKLIP*TFLQSQDVGKCKIF
Trigger: AAAGATTTTGCATTTGCCAACATCTTGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 90 bp AGACTGGATGCTTTTCACCAAAATAAGGAAGAAGAGCAAGAATCTTaGGTCTTATCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGC +
Preference number: 1 (lower is better)
Translates to: RLDAFHQNKEEEQES*VLSVLHNVVQELLG
Trigger: GCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTATTTTGGTGAAAAGCATCCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678554.1
3UTR TCA 90 bp CCTTTGGGTCTATATGCAGTAATGATATTTCTGGTTCTAAATCCTTaGGGAATCACCACACTGTCTTCCACAGTGGTTGAATTAGTTGAC +
Preference number: 1 (lower is better)
Translates to: PLGLYAVMIFLVLNP*GITTLSSTVVELVD
Trigger: GTCAACTAATTCAACCACTGTGGAAGACAGTGTGGTGATTCCTCAAGGATTTAGAACCAGAAATATCATTACTGCATATAGACCCAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 90 bp CTCAAGGAAATGAGAGAGGACACAAACGAAGGGAAAAACGTTACATaGTCATGGATAGGAAGAATCAATATCATGAAAATGGCCATACTG +
Preference number: 1 (lower is better)
Translates to: LKEMREDTNEGKNVT*SWIGRINIMKMAIL
Trigger: CAGTATGGCCATTTTCATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTGTCCTCTCTCATTTCCTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CCA 90 bp GAAATGAGAGAGGACACAAACGAAGGGAAAAACGTTACATGCTCATaGATAGGAAGAATCAATATCATGAAAATGGCCATACTGCCCAAA +
Preference number: 1 (lower is better)
Translates to: EMREDTNEGKNVTCS*IGRINIMKMAILPK
Trigger: TTTGGGCAGTATGGCCATTTTCATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTGTCCTCTCTCATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 90 bp AATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAATGGCATTGATAGCTTTCACAAAGTT +
Preference number: 1 (lower is better)
Translates to: NHISQGKSLIFHVCS*SPRLLNGIDSFHKV
Trigger: AACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR TCA 90 bp TTTCCAAACTACAAACTGAAGGAGAAGGTAAGTTTTGGTCTTCAATaGAAAAACCCTGGTTTAGGCAAGAAAGTCAGTAGCCTAATAGCT +
Preference number: 1 (lower is better)
Translates to: FPNYKLKEKVSFGLQ*KNPGLGKKVSSLIA
Trigger: AGCTATTAGGCTACTGACTTTCTTGCCTAAACCAGGGTTTTTTCATTGAAGACCAAAACTTACCTTCTCCTTCAGTTTGTAGTTTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 90 bp TCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAA +
Preference number: 1 (lower is better)
Translates to: SICKLLRLLLKVYSL*IYQFPFTTDADHYE
Trigger: TTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
3UTR GCA 90 bp AATCACCATTGTGACATGAGATGGTATCTCATTGTGATTTTGATATaGACGTCTCTAATGGTCAGTGATGTTGAGCTTTTCTTCATGTTT +
Preference number: 1 (lower is better)
Translates to: NHHCDMRWYLIVILI*TSLMVSDVELFFMF
Trigger: AAACATGAAGAAAAGCTCAACATCACTGACCATTAGAGACGTGCATATCAAAATCACAATGAGATACCATCTCATGTCACAATGGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 90 bp TTCAATTTTCTGCATATGGCTAGCCAGATATACAGTAGGATTAATTaGATAGAGAGTCCTTTCCCTATTGCTTCTTTTTGTCAGCTTTGT +
Preference number: 1 (lower is better)
Translates to: FNFLHMASQIYSRIN*IESPFPIASFCQLC
Trigger: ACAAAGCTGACAAAAAGAAGCAATAGGGAAAGGACTCTCTATTCAATTAATCCTACTGTATATCTGGCTAGCCATATGCAGAAAATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 90 bp GCAATATATGTAACAAGCAGAGCTCACTCAATATATAGTAACTATTaGCATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCC +
Preference number: 1 (lower is better)
Translates to: AIYVTSRAHSIYSNY*HFAGWYSKFHEQSS
Trigger: GGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGTTACTATATATTGAGTGAGCTCTGCTTGTTACATATATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
3UTR CCA 90 bp ATGAGCCCATGCAACATTAAACTAATATTCATGATGCTCACAGACTaGAATTTACCAGGAAATCCAAATATGCCTCTAAATACCATTTAC +
Preference number: 1 (lower is better)
Translates to: MSPCNIKLIFMMLTD*NLPGNPNMPLNTIY
Trigger: GTAAATGGTATTTAGAGGCATATTTGGATTTCCTGGTAAATTCCAGTCTGTGAGCATCATGAATATTAGTTTAATGTTGCATGGGCTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCCCACAAGCGTCTGCCTaGGGGGAAGCGGTAGTTGGC +
Preference number: 2 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCPQASA*GEAVVG
Trigger: GCCAACTACCGCTTCCCCCCAGGCAGACGCTTGTGG...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677877.1
3UTR-3UTR TCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 2 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: VAATAMLSIAHSSVPLRITAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 2 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 2 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: GVFRRAAALEVGHQDSFAAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677796.1
ENST00000677877.1
3UTR-3UTR CCA 90 bp GCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 2 (lower is better)
Translates to: AATAMLSIAHSSVPLRIRLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...CCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 2 (lower is better)
Translates to: AATAMLSIAHSSVPLRIRSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...CCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR CAA 90 bp AACAAGCCCAGTTCCGGCCCAACACATCATGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGGTCACCTTGCTGCCCTCTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: NKPSSGPTHHAPTQS*SRCSKWSPCCPLLY
Trigger: ATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACTGGGCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 2 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp TGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCATGGTCCTTTCCAGCTTaGAAAGGCTGTGGTCCGTGT +
Preference number: 2 (lower is better)
Translates to: CHHVVKRSKVCGSMPGGPWSFPA*KGCGPC
Trigger: ACACGGACCACAGCCTTTTCAAGCTGGAAAGGACCA...TGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR GCA 90 bp AAAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: KILGVLSCNKVWEAAFTARPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGTTCAGCAGTCAGTGGTaGAGGTTTGGGCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: WCGCHCYALNCTLISSSAFSSQW*RFGLFL
Trigger: CAGGAAAAGCCCAAACCTGCACCACTGACTGCTGAA...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678520.1
3UTR-3UTR GCA 90 bp CAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 2 (lower is better)
Translates to: QLHTHQFLCGSGSSHSHPTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...GGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: GPMMDQLKLHQGFIAASISRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATACAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 2 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GGSHHILQKQLPWAHDGPQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp TGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: WLPLLCSQLHTHQFLCGSTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...GGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: VFRRAAALEVGHQDSFAFAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...AAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677796.1
ENST00000677877.1
3UTR-3UTR GCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: GPMMDQLKLHQGFIAASILGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: LNCTLISSSADPEVAILTCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 2 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTATTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 2 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp TTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: LVWLPLLCSQLHTHQFLCSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 2 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp ATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 2 (lower is better)
Translates to: IAASIETSYIVVLRGVITPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...CGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTATGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 2 (lower is better)
Translates to: LNCTLISSSADPEVAILTGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 2 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR CAA 90 bp ACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGTaGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTG +
Preference number: 2 (lower is better)
Translates to: TGASRQGTSVFFTSK*QCLFPGWVLLLIPV
Trigger: CACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
3UTR-3UTR TCA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAACACTACTCAAGGAAATaGGAGAGGACACAAACGAAG +
Preference number: 2 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQHYSRK*ERTQTK
Trigger: CTTCGTTTGTGTCCTCTCTCATTTCCTTGAGTAGTG...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp TGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 2 (lower is better)
Translates to: CSGGSHHILQKQLPWAHDPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...ATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp TTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: FVVEEVIIYFKSNCHGPMTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...CATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 2 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR GCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: AHKQNSMISQLKGVERVSQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCATGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: GGSHHILQKQLPWAHDGPCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...TGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 2 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 2 (lower is better)
Translates to: WCGCHCYALNCTLISSSAGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 2 (lower is better)
Translates to: QLHTHQFLCGSGSSHSHPLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 2 (lower is better)
Translates to: EASFFHQPKILGVLSCNKSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...CTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTGGTTTGGGCTTTTCCTaGGAATTCTTAAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: AHKQNSMISQLKGVERVSGLGFS*EFLRCA
Trigger: AGCACACCTTAAGAATTCTCAGGAAAAGCCCAAACC...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678520.1
3UTR-3UTR TCA 90 bp TGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCATATGTTTCAGAGCTCTaGCTGCCTTATTCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: CHHVVKRSKVCGSMPGGPYVSEL*LPYSPV
Trigger: AACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATA...TGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR TCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 2 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR GCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCAGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 2 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: PPEGLGLGSENCWLVYGFQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp CTGTGTAGGGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LCRGSKLLPPAQNLGRTFSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...GAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCCCTACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp AGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 2 (lower is better)
Translates to: RHTLQFRNWCGCHCYALNWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTCTAGACTGCCTAGACTaGTCTGCCACTGATTGGCTG +
Preference number: 2 (lower is better)
Translates to: TYVALALSVFLPCLPRVFLDCLD*SATDWL
Trigger: CAGCCAATCAGTGGCAGAGCAGTCTAGGCAGTCTAG...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR GCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 2 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 2 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 2 (lower is better)
Translates to: VAATAMLSIAHSSVPLRIFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CAA 90 bp CTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTA +
Preference number: 2 (lower is better)
Translates to: LEHTGYKTQPPEGLG*GSENCWLVYGFSLL
Trigger: TAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 2 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTAAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 2 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAACTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCACAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 2 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp AAACCCAAAGGGCTTCCACCTATATTATTTGAGCCTCACGATAATCTCTTTGGGTTAATCCCAGCACTTTaGAACGCCGAGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: KPKGLPPILFEPHDNLFGLIPAL*NAEVGG
Trigger: TCCCCCAACCTCGGCGTTCCAAAGTGCTGGGATTAA...CCCAAAGAGATTATCGTGAGGCTCAAATAATATAGGTGGAAGCCCTTTGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 2 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGGGAATACAGAAGAAGTaGAGGATCTCTTCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEGIQKK*RISSRR
Trigger: TCTCCTTGAAGAGATCCTTCACTTCTTCTGTATTCC...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCACTGGTTCTAAATCCTTaGGGAATCACCACACTGTCT +
Preference number: 2 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPLVLNP*GITTLS
Trigger: AGACAGTGTGGTGATTCCTCAAGGATTTAGAACCAG...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 2 (lower is better)
Translates to: EASFFHQPKILGVLSCNKSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...CTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp GGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: GYKTQPPEGLGLGSENCWFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp AGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 2 (lower is better)
Translates to: RCWQMQNLLLYFSSQWCRSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...CCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp AAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: KCKIFCCISAVSGAGLGLQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...AAGGCCCAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
3UTR-3UTR CCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGATGATGCTCACAGACTaGAATTTACCAGGAAATCCA +
Preference number: 2 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEMMLTD*NLPGNP
Trigger: TGGATTTCCTGGTAAATTCCAGTCTGTGAGCATCAT...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCATATTTCAGCAGTCAGTaGTGCAGGTTTGGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSYFSSQ*CRFGLF
Trigger: GAAAAGCCCAAACCTGCACCACTGACTGCTGAAATA...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678520.1
3UTR-3UTR CCA 90 bp CATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: HDGPTQASSGLHCSLHRNPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...GTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 2 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTTTAAAACAGGAGCAATaGCCAGGTACAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: TYVALALSVFLPCLPRVFLKQEQ*PGTVAH
Trigger: ATGAGCCACTGTACCTGGCCATTGCTCCTGTTTTAA...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CCA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTATCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 2 (lower is better)
Translates to: VITKAVFLHFAWRISACVSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR CAA 90 bp ATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTTCCTGCATTAGTTaGCTGAGGATAACAGCTTCCAACTCCATCCATGTCCCTGAAAAG +
Preference number: 2 (lower is better)
Translates to: ISENMWWLVFCSCIS*LRITASNSIHVPEK
Trigger: CTTTTCAGGGACATGGATGGAGTTGGAAGCTGTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTTCTCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp TTTGGGCCTTGGGATTTTTCGACTGTGGCCACCACTTCTCCTAATCATATCTCCCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: FGPWDFSTVATTSPNHISLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...GGAGATATGATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCCAAGGCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR TCA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACCATTACAGCATGGCATaGAAGCAGAGGTACCTGCGA +
Preference number: 2 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNHYSMA*KQRYLR
Trigger: TCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATG...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp TTCCTGGATGCATACACACTCCCAAGACTGAATCAGGAAGAAGTTGGATCCCTGAGATGGATTTACAGTTaGATTCTACCAGAGGTACAA +
Preference number: 2 (lower is better)
Translates to: FLDAYTLPRLNQEEVGSLRWIYS*ILPEVQ
Trigger: TTGTACCTCTGGTAGAATTCAACTGTAAATCCATCT...CAGGGATCCAACTTCTTCCTGATTCAGTCTTGGGAGTGTGTATGCATCCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 2 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp AACTCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCTCTGGTGGGAAATGCTaGGATTCAGTGCTCGAAGGT +
Preference number: 2 (lower is better)
Translates to: NSETQNVKVKFPSMQLVSSGGKC*DSVLEG
Trigger: ACCTTCGAGCACTGAATCTCAGCATTTCCCACCAGA...GGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR TCA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 2 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR GCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAGAAAGCAGAGGTACCTaGGATATGCAATGGGAACCA +
Preference number: 2 (lower is better)
Translates to: KEMKTCYPITPLQHGMKAESRGT*DMQWEP
Trigger: TGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTC...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGACACTCCATTACAGCATaGCATGAAAGCAGAGGTACC +
Preference number: 2 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRHSITA*HESRGT
Trigger: GGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTG...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 2 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp TCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 2 (lower is better)
Translates to: SQDVGKCKIFCCISAVSGGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...ACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR CAA 90 bp ACAAGACAAGGATGCCCTCTCTCACCATTCTTATTCAATATAGTATaGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAG +
Preference number: 2 (lower is better)
Translates to: TRQGCPLSPFLFNIV*GVLARAIRQEKEIK
Trigger: CTTTATTTCTTTCTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGGTGAGAGAGGGCATCCTTGTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CAA 90 bp TGTTCTATTGTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTaGGTTTTCTGTTCCTGCATTAGTTTGCTGAGGATAACAGCTTCC +
Preference number: 2 (lower is better)
Translates to: CSIVQLPLISENMWW*VFCSCISLLRITAS
Trigger: GGAAGCTGTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAACAATAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCAAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: KAVFLHFAWRISACVGEAKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp CATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCAAGCTTCACTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 2 (lower is better)
Translates to: HILQKQLPWAHDGPTQASLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...TGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCATCCACCCAGACAATATaGATTAAACATAACCCCATA +
Preference number: 2 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPSTQTI*IKHNPI
Trigger: TATGGGGTTATGTTTAATTCATATTGTCTGGGTGGA...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCATACAGTAGGATTAATTaGATAGAGAGTCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPYSRIN*IESPFP
Trigger: AGGGAAAGGACTCTCTATTCAATTAATCCTACTGTA...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ACTCCTGGAGCCCTACTGCAGTTCAAGGAGGGTAAAAACATCATTATAGTGAATCTCAGAATGTTAAGGTaGAATTTCCAAGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: TPGALLQFKEGKNIIIVNLRMLR*NFQACS
Trigger: GCTGCATGCTTGGAAATTTCACCTTAACATTCTGAG...ATTCACTATAATGATGTTTTTACCCTCCTTGAACTGCAGTAGGGCTCCAGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR GCA 90 bp ATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAGTTCTGATGTTTCTCTATTCAAGCAGAAATaGAAGAGAGGAAAGTCCACC +
Preference number: 2 (lower is better)
Translates to: MKAEVPAICNGNQSSDVSLFKQK*KRGKST
Trigger: GGTGGACTTTCCTCTCTTGCATTTCTGCTTGAATAG...AGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAGAGGTACCTGCGATATaGAATGGGAACCAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: KEMKTCYPITPLQHGMKAEVPAI*NGNQSS
Trigger: AGAACTTTGGTTCCCATTGCATATCGCAGGTACCTC...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGAATAAAAGTTTCCAGGTaGGAGCAGTCCACTGTACTC +
Preference number: 2 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRIKVSR*EQSTVL
Trigger: GAGTACAGTGGACTGCTCCCACCTGGAAACTTTTAT...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 2 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp CTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCTTATTCTCCTGTTACATAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: LWSVFMFQSSDCLILLLHKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...ATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATAAACACGGACCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR TCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACCAGGCTTACCAAAGCTaGAAGAAGTCAGCTCTAAAC +
Preference number: 2 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNQAYQS*KKSALN
Trigger: GTTTAGAGCTGACTTCTTTCAGCTTTGGTAAGCCTG...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 2 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 2 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGGTTTCATATCCACTGTaGAATATCTCTGGGAGATTC +
Preference number: 2 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVVSYPL*NISGRF
Trigger: GAATCTCCCAGAGATATTTCACAGTGGATATGAAAC...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR GCA 90 bp GAGCAGGAAACAAGACCATTATTCGGCAGGAAAGAGCTAGAAGATAGCAATCAGTCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 2 (lower is better)
Translates to: EQETRPLFGRKELEDSNQSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...CTGATTGCTATCTTCTAGCTCTTTCCTGCCGAATAATGGTCTTGTTTCCTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAACAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGCAAAAAGAACAAACCTaGAGGCATCATGCTATCTTT +
Preference number: 2 (lower is better)
Translates to: PFLFNIVLGVLARAIRQEQKEQT*RHHAIF
Trigger: AAAGATAGCATGATGCCTCCAGGTTTGTTCTTTTTG...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCACATTGTGACATGAGATaGTATCTCATTGTGATTTTG +
Preference number: 2 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPHCDMR*YLIVIL
Trigger: CAAAATCACAATGAGATACCATCTCATGTCACAATG...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp TCTATTGTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTGCTCTATTTAATAACTaGCAGATGTGTGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: SIVQLPLISENMWWLVFCALFNN*QMCGSL
Trigger: CAGTGACCCACACATCTGCCAGTTATTAAATAGAGC...ACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAACAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679032.1
3UTR-3UTR TCA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp CTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: LQSQDVGKCKIFCCISAVKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGAAGTTTTGGTCTTCAATaGAAAAACCCTGGTTTAGGC +
Preference number: 2 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRSFGLQ*KNPGLG
Trigger: GCCTAAACCAGGGTTTTTTCATTGAAGACCAAAACT...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATCAGGCTTACCAAAGCTaGAAGAAGTCAGCTCTAAAC +
Preference number: 2 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYQAYQS*KKSALN
Trigger: GTTTAGAGCTGACTTCTTTCAGCTTTGGTAAGCCTG...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp AGAGTCCCTCAACAGATGCTCTATTTAATAACCAGTTTGTTCCTCAGATGTGGCTCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 2 (lower is better)
Translates to: RVPQQMLYLITSLFLRCGSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...GCCACATCTGAGGAACAAACTGGTTATTAAATAGAGCATCTGTTGAGGGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677468.1
ENST00000677796.1
3UTR-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCACCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR TCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR GCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 2 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACATCCCATTCTGTTGGTTaGCTGTTCACTCTGACAGTA +
Preference number: 2 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTSHSVG*LFTLTV
Trigger: TACTGTCAGAGTGAACAGGCAACCAACAGAATGGGA...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CCA 90 bp TCTATTGTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTAAATGGATAAATTCCTaGATGCATACACACTCCCAA +
Preference number: 2 (lower is better)
Translates to: SIVQLPLISENMWWLVFCKWINS*MHTHSQ
Trigger: TTGGGAGTGTGTATGCATCCAGGAATTTATCCATTT...ACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAACAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACCTTAAAACTTCAACATaGGCCCATGCAACATTAAAC +
Preference number: 2 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNLKTST*AHATLN
Trigger: GTTTAATGTTGCATGGGCTCATGTTGAAGTTTTAAG...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATGCGTCATCAAGGTCCTaGGTGATAAAGAATTTATCA +
Preference number: 2 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYASSRS*VIKNLS
Trigger: TGATAAATTCTTTATCACTCAGGACCTTGATGACGC...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATGAAGAATCAATATCATaGAAATGGCCATACTGCCCA +
Preference number: 2 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYEESIS*KWPYCP
Trigger: TGGGCAGTATGGCCATTTTCATGATATTGATTCTTC...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACAACCTGGAGGCATCATaGTATCTTTCATACTATACT +
Preference number: 2 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNNLEAS*YLSYYT
Trigger: AGTATAGTATGAAAGATAGCATGATGCCTCCAGGTT...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR GCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACAGATGTGTGGGTCACTaGTGGTTCATTATAAAGTTT +
Preference number: 2 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNRCVGH*WFIIKF
Trigger: AAACTTTATAATGAACCAGCAGTGACCCACACATCT...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679032.1
3UTR-3UTR GCA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAATCAGTCTTTTTACCATaGCTGCCTAGGGTTTTTGAC +
Preference number: 2 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKSVFLP*LPRVFD
Trigger: GTCAAAAACCCTAGGCAGGCATGGTAAAAAGACTGA...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR GCA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAAAGGCCTTTAAAGGGCTaGCTAAAATTTCTAGCAGTC +
Preference number: 2 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKRPLKG*LKFLAV
Trigger: GACTGCTAGAAATTTTAGGCAGCCCTTTAAAGGCCT...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CCA 90 bp TCTATTGTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTTCAATTTTCTGCATATaGCTAGCCAGATATACAGTA +
Preference number: 2 (lower is better)
Translates to: SIVQLPLISENMWWLVFCSIFCI*LARYTV
Trigger: TACTGTATATCTGGCTAGCCATATGCAGAAAATTGA...ACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAACAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR TCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATCTTAAAACTTCAACATaGGCCCATGCAACATTAAAC +
Preference number: 2 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYLKTST*AHATLN
Trigger: GTTTAATGTTGCATGGGCTCATGTTGAAGTTTTAAG...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATTTAGCATTCCAGAAATaGAACACTAGGCATAAATGG +
Preference number: 2 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYLAFQK*NTRHKW
Trigger: CCATTTATGCCTAGTGTTCCATTTCTGGAATGCTAA...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CAA 90 bp TTTAATAATCACCATTGTGACATGAGATGGTATCTCATTGTGATTTaGATATGCACGTCTCTAATGGTCAGTGATGTTGAGCTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: FNNHHCDMRWYLIVI*ICTSLMVSDVELFF
Trigger: GAAGAAAAGCTCAACATCACTGACCATTAGAGACGTGCATATCAAAATCACAATGAGATACCATCTCATGTCACAATGGTGATTATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACACACATGAATATCTTCTaGGAAGTGTCTGTTCATGTT +
Preference number: 2 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTHMNIF*EVSVHV
Trigger: AACATGAACAGACACTTCCCAGAAGATATTCATGTG...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CCA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACATCAATTTTCTGCATATaGCTAGCCAGATATACAGTA +
Preference number: 2 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTSIFCI*LARYTV
Trigger: TACTGTATATCTGGCTAGCCATATGCAGAAAATTGA...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CAA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 3 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GCAGTTCCCACCTTCTTTCCGGTGAAACAAGCCCAGTTCCGGCCCAACACATCAGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 3 (lower is better)
Translates to: AVPTFFPVKQAQFRPNTSAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...TGATGTGTTGGGCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CAA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 3 (lower is better)
Translates to: IPLPVPMCSIVQLPLISERRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CAA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 3 (lower is better)
Translates to: WCGCHCYALNCTLISSSAAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 3 (lower is better)
Translates to: AHDGPTQASSGLHCSLHRAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...TCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 3 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 3 (lower is better)
Translates to: QLHTHQFLCGSGSSHSHPPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CTGTGTAGGGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 3 (lower is better)
Translates to: LCRGSKLLPPAQNLGRTFAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCCCTACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR TCA 72 bp ACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGCCCAACACATCATGCA +
Preference number: 3 (lower is better)
Translates to: THSQRQFPPSFR*NKPSSGPTHHA
Trigger: TGCATGATGTGTTGGGCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCCCCATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: HQFLCGSGSSHSHPSRCPMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...GGGGCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp AAAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 3 (lower is better)
Translates to: KILGVLSCNKVWEAAFTAAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 3 (lower is better)
Translates to: VAATAMLSIAHSSVPLRIHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...GATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 3 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CAA 90 bp GCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 3 (lower is better)
Translates to: AATAMLSIAHSSVPLRIRVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...CCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 3 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR GCA 72 bp TTTACTGTTTTCCAAGGGAGTGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCAGGACTCCTTTGCATT +
Preference number: 3 (lower is better)
Translates to: FTVFQGSVQEGS*LGGRSPGLLCI
Trigger: AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCCTTGGAAAACAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
3UTR GCA 72 bp TTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCCGCCTTCACAGCCTTG +
Preference number: 3 (lower is better)
Translates to: FFHQPKILGVLS*NKVWEAAFTAL
Trigger: CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp AGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCTGCGGATCCGGAAGTA +
Preference number: 3 (lower is better)
Translates to: RNWCGCHCYALN*TLISSSADPEV
Trigger: TACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 72 bp CCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCT +
Preference number: 3 (lower is better)
Translates to: PKILGVLSCNKV*EAAFTALSILA
Trigger: AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 3 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 3 (lower is better)
Translates to: LKLHQGFIAASIETSYIVVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR GCA 72 bp CCAACACATCATGCACCCACCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGCTGCCCTCTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: PTHHAPTQSLSR*SKWSPCCPLLY
Trigger: ATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp ATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 3 (lower is better)
Translates to: IAASIETSYIVVLRGVITAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...CGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 3 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 3 (lower is better)
Translates to: LKLHQGFIAASIETSYIVHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CTCCCATTCTTCAGGTACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGTTTAATCCCAGCACTTaGGAACGCCGAGGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: LPFFRYLCCLGSFSLFTMFNPST*ERRGWG
Trigger: CCCCCAACCTCGGCGTTCCAAAGTGCTGGGATTAAA...CATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CAA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR TCA 72 bp TGGGGAGGGTTTCAGAGAGCAGCGTCATCAAGGTCCTaGGTGATAAAGAATTTATCAGGTCCAGAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: WGGFQRAASSRS*VIKNLSGPEVR
Trigger: TCTCACCTCTGGACCTGATAAATTCTTTATCACTCAGGACCTTGATGACGCTGCTCTCTGAAACCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CCA 72 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCGCTTCTAGCATACCCA +
Preference number: 3 (lower is better)
Translates to: PPEGLGLGSENC*LVYGFSLLAYP
Trigger: TGGGTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 72 bp AGGTGTTCTCCCATTCTTCAGGTACCTATGTTGCCTTaGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGG +
Preference number: 3 (lower is better)
Translates to: RCSPILQVPMLP*LFQSFYHACLG
Trigger: CCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAGAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CAA 90 bp TATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: YFSSQWCRFGPWDFSTVACKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CAA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCACTCCCATTCTGTTGGTaGCCTGTTCACTCTGACAGT +
Preference number: 3 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPLPFCW*PVHSDS
Trigger: ACTGTCAGAGTGAACAGGCAACCAACAGAATGGGAG...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CAA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 3 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp AGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: RCWQMQNLLLYFSSQWCRVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...CCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR-3UTR CAA 90 bp GGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATATGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: GKQASSTSPKSWAYFPAICKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: WCGCHCYALNCTLISSSAMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: LSCNKVWEAAFTALSILASSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: GVLSCNKVWEAAFTALSISSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: HDGPTQASSGLHCSLHRNQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 3 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR TCA 72 bp AAACATGCTACCCAATCACTCCATTACAGCATGGCATaGAAGCAGAGGTACCTGCGATATGCAATGGGAACC +
Preference number: 3 (lower is better)
Translates to: KHATQSLHYSMA*KQRYLRYAMGT
Trigger: GGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 72 bp CATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTaGAGCCTCCATAGAAACCTCCTACATAGTGGTACT +
Preference number: 3 (lower is better)
Translates to: HDGPTQASSGLH*SLHRNLLHSGT
Trigger: AGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAATTGCACACTCATCAGT +
Preference number: 3 (lower is better)
Translates to: GRHTLQFRNWCG*HCYALNCTLIS
Trigger: ACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp GAACAGAAAGAAAGAATAATGCCTTCAGGCCTAGACTaGCTAGACTGCTCTGCCACTGATTGGCTGTGTGAT +
Preference number: 3 (lower is better)
Translates to: EQKERIMPSGLD*LDCSATDWLCD
Trigger: ATCACACAGCCAATCAGTGGCAGAGCAGTCTAGGCAGTCTAGGCCTGAAGGCATTATTCTTTCTTTCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR GCA 72 bp CTCATAGGTGTTCTCCCATTCTTCAGGTACCTATGTTaGCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LIGVLPFFRYLC*LGSFSLFTMPA
Trigger: GGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAGAACACCTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CAA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: GKQASSTSPKSWAYFPAISSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 3 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
3UTR TCA 72 bp GCTGAGGATAACAGCTTCCAACTCCATCCATGTCCCTaGAAAGGACAGGATCTCATTCCTTTTTATTGCTGC +
Preference number: 3 (lower is better)
Translates to: AEDNSFQLHPCP*KGQDLIPFYCC
Trigger: GCAGCAATAAAAAGGAATGAGATCCTGTCCTTTTCAGGGACATGGATGGAGTTGGAAGCTGTTATCCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 72 bp TCATCATATACTTCAAAAGCAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTCATCAGGGCTTCATTG +
Preference number: 3 (lower is better)
Translates to: SSYTSKATAMGP*WTNSSFIRASL
Trigger: CAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp TTACAGCATGGCATGAAAGCAGAGGTACCTGCGATATaGAATGGGAACCAAAGTTCTGATGTTTCTCACGGT +
Preference number: 3 (lower is better)
Translates to: LQHGMKAEVPAI*NGNQSSDVSHG
Trigger: ACCGTGAGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCATGCCATGCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 72 bp CAGAGGAGTAATAACGAAAGCAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTGTGTAGGGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: QRSNNESSLPSF*MENQCLCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTACTCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp GTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTaGCATGGGCCCATGATGGACCAACTCAAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: VVEEVIIYFKSN*HGPMMDQLKLH
Trigger: ATGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACACTCATCAGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: HTLQFRNWCGCH*YALNCTLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 72 bp GGAGTAATAACGAAAGCAGTCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTAGGGGAAGCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: GVITKAVFLHFA*RISACVGEASF
Trigger: GAAGCTTGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR CCA 72 bp AGTCTTTTTCACTTCAAAGTTGCAATGTCTTTTCCCTaGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTC +
Preference number: 3 (lower is better)
Translates to: SLFHFKVAMSFP*LGPVTHPCGSL
Trigger: GAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAGTGAAAAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
3UTR-3UTR CAA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTACACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 3 (lower is better)
Translates to: VITKAVFLHFAWRISACVHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 3 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR GCA 72 bp TCACGTTCAAATTGTTGCCCAAGGCCTTTAAAGGGCTaGCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: SRSNCCPRPLKG*LKFLAVLIGVL
Trigger: GAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATTTGAACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR GCA 72 bp GATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAGGTACACCACTACTTT +
Preference number: 3 (lower is better)
Translates to: DGEMARIAKVII*CIQLLKVHHYF
Trigger: AAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
3UTR-3UTR CAA 90 bp GCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCATGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: ASIETSYIVVLRGVITKACKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...TGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: PPEGLGLGSENCWLVYGFMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR TCA 72 bp TCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTaGTACCAAAACCTGGCAGAGATACGACAACAAAAA +
Preference number: 3 (lower is better)
Translates to: SSLTHFMRPASS*YQNLAEIRQQK
Trigger: TTTTTGTTGTCGTATCTCTGCCAGGTTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 72 bp GGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATaGAAATCAATAAACGTCATTCATCACATAAACAGA +
Preference number: 3 (lower is better)
Translates to: GFIPRMQGRFNI*KSINVIHHINR
Trigger: TCTGTTTATGTGATGAATGACGTTTATTGATTTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 72 bp ATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTTCCTaGATTAGTTTGCTGAGGATAACAGCTTCCAACTCC +
Preference number: 3 (lower is better)
Translates to: ISENMWWLVFCS*ISLLRITASNS
Trigger: GGAGTTGGAAGCTGTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTTCTCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR GCA 72 bp ATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTaGCTAGGGTTTTTGACGCAGAACAGAAAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: MLPWLFQSFYHA*LGFLTQNRKKE
Trigger: TTCTTTCTTTCTGTTCTGCGTCAAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCTCTTGCCCTCTAAGTaGAGTCTCTATCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYLLPSK*SLYLCK
Trigger: TTTGCACAGATAGAGACTCAACTTAGAGGGCAAGAG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR CAA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR-3UTR CAA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
3UTR-3UTR CAA 90 bp TTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAGTCCCATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: LVSNRTDKIDTMNISPVPSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
3UTR TCA 72 bp AAGCTTCTGAGATTGCTGCTGAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTTACAACTGATGCAGAT +
Preference number: 3 (lower is better)
Translates to: KLLRLLLKVYSL*IYQFPFTTDAD
Trigger: ATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
3UTR TCA 72 bp TCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATaGGAGAGGACACAAACGAAGGGAAAAACGTTACAT +
Preference number: 3 (lower is better)
Translates to: SSRRTTNHYSRK*ERTQTKGKTLH
Trigger: ATGTAACGTTTTTCCCTTCGTTTGTGTCCTCTCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 72 bp CACCAACAAAAGGCAAGCAGAGAGCAAAATCATGAATaGACTCCCATTCCCAATAGCTACAGAGAGAATAAA +
Preference number: 3 (lower is better)
Translates to: HQQKASREQNHE*TPIPNSYRENK
Trigger: TTTATTCTCTCTGTAGCTATTGGGAATGGGAGTTCATTCATGATTTTGCTCTCTGCTTGCCTTTTGTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 3 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
3UTR TCA 72 bp CTATATGCAGTAATGATATTTCTGGTTCTAAATCCTTaGGGAATCACCACACTGTCTTCCACAGTGGTTGAA +
Preference number: 3 (lower is better)
Translates to: LYAVMIFLVLNP*GITTLSSTVVE
Trigger: TTCAACCACTGTGGAAGACAGTGTGGTGATTCCTCAAGGATTTAGAACCAGAAATATCATTACTGCATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR CCA 72 bp GAGGACACAAACGAAGGGAAAAACGTTACATGCTCATaGATAGGAAGAATCAATATCATGAAAATGGCCATA +
Preference number: 3 (lower is better)
Translates to: EDTNEGKNVTCS*IGRINIMKMAI
Trigger: TATGGCCATTTTCATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTGTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 3 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
3UTR TCA 72 bp GAACAGTATACCTCTCAGATCATACAAAGAGTCATCTaGATCAACAGAGTAAGGATGACAAACTACTCTCTA +
Preference number: 3 (lower is better)
Translates to: EQYTSQIIQRVI*INRVRMTNYSL
Trigger: TAGAGAGTAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAGGTATACTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 72 bp CTGCATATGGCTAGCCAGATATACAGTAGGATTAATTaGATAGAGAGTCCTTTCCCTATTGCTTCTTTTTGT +
Preference number: 3 (lower is better)
Translates to: LHMASQIYSRIN*IESPFPIASFC
Trigger: ACAAAAAGAAGCAATAGGGAAAGGACTCTCTATTCAATTAATCCTACTGTATATCTGGCTAGCCATATGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 72 bp GTGATGTTGAGCTTTTCTTCATGTTTATTGGCCACATaGATATCTTCTGGGAAGTGTCTGTTCATGTTCTTT +
Preference number: 3 (lower is better)
Translates to: VMLSFSSCLLAT*ISSGKCLFMFF
Trigger: AAAGAACATGAACAGACACTTCCCAGAAGATATTCATGTGGCCAATAAACATGAAGAAAAGCTCAACATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
3UTR TCA 72 bp AGTATTTCACTCATTAAGCTATTATTGCTCACCTACTaGAGACTAAGCAATACTCCCAAATACAAGATACAC +
Preference number: 3 (lower is better)
Translates to: SISLIKLLLLTY*RLSNTPKYKIH
Trigger: GTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAATAGCTTAATGAGTGAAATACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TCCCCAAGGGTCCCCGAATCCAGTCAAGATGCTCTGGCCACCCACAAGCGTCTGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPRVPESSQDALATHKRLRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CAGACGCTTGTGGGTGGCCAGAGCATCTTGACTGGATTCGGGGACCCTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CTAGCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LAATGRSTLSQAALSLSPRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR TCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCGGTGGGTGGATCACCTaGGGTCAGGAGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCGGWIT*GQEMET
Trigger: GGTCTCCATCTCCTGACCTCAGGTGATCCACCCACC...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677106.1
CDS-3UTR GCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTGCCCAGCACCCATGCTaGAGGGAGCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVAQHPC*RELRKE
Trigger: CTCTTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGC...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFAAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCAGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GRSTLSQAALSLSPNVCSVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...TGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATACAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTAGCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCATAATCCTCATAGGCTaGGCGCAGCGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LAATGRSTLSQAALSLSPIILIG*AQRVMP
Trigger: AGGCATGACCCGCTGCGCCCAGCCTATGAGGATTAT...GGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677106.1
CDS-3UTR GCA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCCCAGCACCCATGCTaGAGGGAGCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHAQHPC*RELRKE
Trigger: CTCTTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGC...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SVQEGSCLGGRSPGLLCIVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: EGSCLGGRSPGLLCILHAVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTGCATACCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VCGSMPGGPGSQTLNGAYQEAER*GLAVSP
Trigger: TGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTG...GTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGAGGGCCCAGCACCCATaGTGCAGGGAGCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTRAQHP*CRELKN
Trigger: ATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677106.1
CDS-3UTR GCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCGAATCCAGTCAAGATaGTCTGGCCACCCACAAGCG +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVRIQSR*SGHPQA
Trigger: CGCTTGTGGGTGGCCAGAGCATCTTGACTGGATTCG...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWQDRCS*QVCRSA
Trigger: TGCGCTGCGACACACCTGCCAACTGCACCTATCTTG...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LKLHQGFIAASIETSYIVPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCACGATACCATCTTTCTaGCCAGAGGTACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCTIPSF*PEVLEV
Trigger: GACCTCCAGTACCTCTGGCCAGAAAGATGGTATCGT...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GAAACAAGCCCAGTTCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ETSPVPAQHIMHPPSHCLTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACTGGGCTTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCCATTACAGCATGGCATaGAAGCAGAGGTACCTGCGA +
Preference number: 4 (lower is better)
Translates to: GPHCRRLLCLLAPTSVHGHYSMA*KQRYLR
Trigger: TCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATG...GCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCCTCCATCCATGTCCCTaGAAAGGACAGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCLHPCP*KGQDLI
Trigger: AATGAGATCCTGTCCTTTTCAGGGACATGGATGGAG...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp TATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCGGTGGGTGGATCACCTaGGGTCAGGAGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: YFSSQWCRFGPWDFSTVAGGWIT*GQEMET
Trigger: GGTCTCCATCTCCTGACCTCAGGTGATCCACCCACC...GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAGCCCAGCACCCATGCTaGAGGGAGCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQAQHPC*RELRKE
Trigger: CTCTTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGC...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GCAGTTCCCACCTTCTTTCCGGTGAAACAAGCCCAGTTCCGGCCCAACACATCAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: AVPTFFPVKQAQFRPNTSAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TGATGTGTTGGGCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGGCCATGGTGGTTTCCTaGACCTATCAACTCATCACC +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTAMVVS*TYQLIT
Trigger: GGTGATGAGTTGATAGGTGCAGGAAACCACCATGGC...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp ATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCAGCTTCGACGACCCGGAGGACTaGCGAGCCGGCGGCTTACCC +
Preference number: 4 (lower is better)
Translates to: MMVKWPELPRSSYAVSSFDDPED*RAGGLP
Trigger: GGGTAAGCCGCCGGCTCGGCAGTCCTCCGGGTCGTC...GAAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp GTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VFRRAAALEVGHQDSFAFQDRCS*QVCRSA
Trigger: TGCGCTGCGACACACCTGCCAACTGCACCTATCTTG...AAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp AGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAACCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCLGGRSPGLLCILHANKPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GTCTTATCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLSVLHNVVQELLGRALQPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...CTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGATAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp ACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: THQFLCGSGSSHSHPSRCSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTTCTTGTGGTCCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWFFLWS*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGACCACAAGAAAAA...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677796.1
3UTR CAA 72 bp AGTTCCGGCCCAACACATCATGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGGTCACCTTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGPTHHAPTQS*SRCSKWSPCCP
Trigger: AGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASITAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp ATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACCTATGTTGCCTCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ISSSPHRCSPILQVPMLPPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...AGGCAACATAGGTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp TTCCTGGATGCATACACACTCCCAAGACTGAATCAGGAAGAAGTTGGATCCCTGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: FLDAYTLPRLNQEEVGSLQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...CAGGGATCCAACTTCTTCCTGATTCAGTCTTGGGAGTGTGTATGCATCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTGGTAATAGAGAGAGCTaGGGAGGGTTTCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGGNRES*GGFQRA
Trigger: TGCTCTCTGAAACCCTCCCCAGCTCTCTCTATTACC...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTGGTAATAGAGAGAGCTaGGGAGGGTTTCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVGNRES*GGFQRA
Trigger: TGCTCTCTGAAACCCTCCCCAGCTCTCTCTATTACC...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCATAATCCTCATAGGCTaGGCGCAGCGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: QLHTHQFLCGSGSSHSHPIILIG*AQRVMP
Trigger: AGGCATGACCCGCTGCGCCCAGCCTATGAGGATTAT...GGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR TCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CTGTGTAGGGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: LCRGSKLLPPAQNLGRTFPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...GAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCCCTACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CTGTGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: LCHHVVKRSKVCGSMPGGPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...ACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCTCCATCCATGTCCCTaGAAAGGACAGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVLHPCP*KGQDLI
Trigger: AATGAGATCCTGTCCTTTTCAGGGACATGGATGGAG...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AHKQNSMISQLKGVERVSRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTGAAAGCAGAGGTACCTaGGATATGCAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCESRGT*DMQWEP
Trigger: TGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTC...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGGGCACAAGACAAGGATaGCCTCTCTCACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWGTRQG*PLSPFL
Trigger: TAAGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCC...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATCCCATTCTGTTGGTTaGCTGTTCACTCTGACAGTA +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFASHSVG*LFTLTV
Trigger: TACTGTCAGAGTGAACAGGCAACCAACAGAATGGGA...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTGCCCAGCACCCATGCTaGAGGGAGCTTAAAAATATA +
Preference number: 4 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGAQHPC*RELKNI
Trigger: TATATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGC...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677106.1
CDS-3UTR CCA 90 bp AGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAACAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SCLGGRSPGLLCILHANKQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAATAAAAGTTTCCAGGTaGGAGCAGTCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFAIKVSR*EQSTVL
Trigger: GAGTACAGTGGACTGCTCCCACCTGGAAACTTTTAT...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCAGTGAGAACATGTGGTaGTTGGTTTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPHCRRLLCLLAPTSVHGSENMW*LVFCSC
Trigger: GCAGGAACAGAAAACCAACCACCACATGTTCTCACT...GCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGAAACATGTGCCATGGTaGTTTCCTGCACCTATCAAC +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTKHVPW*FPAPIN
Trigger: GTTGATAGGTGCAGGAAACCACCATGGCACATGTTT...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTGCTGTATCCAGCTTCTaGAGGTACACCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVAVSSF*RYTTTF
Trigger: AAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGC...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR TCA 90 bp GGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKQASSTSPKSWAYFPAIQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: WCGCHCYALNCTLISSSASAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTCAGGCTTACCAAAGCTaGAAGAAGTCAGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGQAYQS*KKSALN
Trigger: GTTTAGAGCTGACTTCTTTCAGCTTTGGTAAGCCTG...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGGTTCTAAATCCTTaGGGAATCACCACACTGTCT +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWLVLNP*GITTLS
Trigger: AGACAGTGTGGTGATTCCTCAAGGATTTAGAACCAG...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTCTGGTTCTAAATCCTTaGGGAATCACCACACTGTCT +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCLVLNP*GITTLS
Trigger: AGACAGTGTGGTGATTCCTCAAGGATTTAGAACCAG...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTGTGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCACTTGCCAGCTGTGTaGCCTTGGACACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LCHHVVKRSKVCGSMPGGHLPAV*PWTHLL
Trigger: CAAGAGATGTGTCCAAGGTCACACAGCTGGCAAGTG...ACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GAAACAAGCCCAGTTCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: ETSPVPAQHIMHPPSHCLRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...GAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACTGGGCTTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAGTTCTGATGTTTCTCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MKAEVPAICNGNQSSDVSQEAER*GLAVSP
Trigger: TGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTG...AGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524463.6
CDS-3UTR GCA 90 bp CTAGCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCGATACAAAATCAATGTaGAGAAGTCACCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: LAATGRSTLSQAALSLSPDTKSM*RSHQDP
Trigger: GGGATCCTGGTGACTTCTGCACATTGATTTTGTATC...GGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGGCACAAGACAAGGATaGCCTCTCTCACCATTCTTA +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILGTRQG*PLSPFL
Trigger: TAAGAATGGTGAGAGAGGGCATCCTTGTCTTGTGCC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGGAGAACCAAACGATTaGAGTTCCCAAGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILGEPND*SSQVSL
Trigger: GAGAGAGACTTGGGAACTGCAATCGTTTGGTTCTCC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp AGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SLHRNLLHSGTQRSNNESQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LSCNKVWEAAFTALSILASCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTGATAAACATGTGCCATaGTGGTTTCCTGCACCTATC +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCDKHVP*WFPAPI
Trigger: GATAGGTGCAGGAAACCACCATGGCACATGTTTATC...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCTTTTTCTTGTGGTCCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LNCTLISSSADPEVAILTFFLWS*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGACCACAAGAAAAA...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCTGTATCCAGCTTCTaGAGGTACACCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHAVSSF*RYTTTF
Trigger: AAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGC...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR TCA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LKLHQGFIAASIETSYIVQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KVAMSFPWLGPVTHPCGSQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...ACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: PPEGLGLGSENCWLVYGFPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LKLHQGFIAASIETSYIVTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASITSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCGCGTCATCAAGGTCCTaGGTGATAAAGAATTTATCA +
Preference number: 4 (lower is better)
Translates to: GPHCRRLLCLLAPTSVHGASSRS*VIKNLS
Trigger: TGATAAATTCTTTATCACTCAGGACCTTGATGACGC...GCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCACAGAGAGCAAAATCATaGATGAACTCCCATTCCCAA +
Preference number: 4 (lower is better)
Translates to: GRSTLSQAALSLSPNVCSQRAKS*MNSHSQ
Trigger: TTGGGAATGGGAGTTCATTCATGATTTTGCTCTCTG...TGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCTACAGTAGGATTAATTaGATAGAGAGTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCYSRIN*IESPFP
Trigger: AGGGAAAGGACTCTCTATTCAATTAATCCTACTGTA...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGATACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLIPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTAT...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678395.1
CDS-3UTR GCA 90 bp TTTGGGCCTTGGGATTTTTCGACTGTGGCCACCACTTCTCCTAATCATATCTCCGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: FGPWDFSTVATTSPNHISAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GGAGATATGATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCCAAGGCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EGSCLGGRSPGLLCILHAAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp GTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: VAATAMLSIAHSSVPLRIQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AHKQNSMISQLKGVERVSFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp TGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CLFPGWVLLLIPVVVSQTFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...AGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSCNKVWEAAFTALSILACMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: CLGGRSPGLLCILHANKDVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTATTCAAGCAGAAATaGAAGAGAGGAAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWLFKQK*KRGKST
Trigger: GGTGGACTTTCCTCTCTTGCATTTCTGCTTGAATAG...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGAGGTACCTGCGATATaGAATGGGAACCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILEVPAI*NGNQSS
Trigger: AGAACTTTGGTTCCCATTGCATATCGCAGGTACCTC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTATTCCCCTCCCTGTaGCCATGTGTTCTATTGTTC +
Preference number: 4 (lower is better)
Translates to: SVQEGSCLGGRSPGLLCILFPSL*PCVLLF
Trigger: GAACAATAGAACACATGGGCACAGGGAGGGGAATAA...AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGACTTGCACCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TVNSMSNHPLISDRARLAPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...TGCAAGTCTGGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp GCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGATCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: AHDGPTQASSGLHCSLHRSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...TCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: LNCTLISSSADPEVAILTSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: YFSSQWCRFGPWDFSTVAYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: YFSSQWCRFGPWDFSTVALPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTAGCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LAATGRSTLSQAALSLSPLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...GGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATAAAAGTTTCCAGGTaGGAGCAGTCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCIKVSR*EQSTVL
Trigger: GAGTACAGTGGACTGCTCCCACCTGGAAACTTTTAT...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCAGTGAGAACATGTGGTaGTTGGTTTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCSENMW*LVFCSC
Trigger: GCAGGAACAGAAAACCAACCACCACATGTTCTCACT...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAAACACTAGGCATAAATaGGTTAAGCCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFANTRHK*VKPRMH
Trigger: ATGCATTCTGGGCTTAACCCATTTATGCCTAGTGTT...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGAAACATGTGCCATGGTaGTTTCCTGCACCTATCAAC +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILKHVPW*FPAPIN
Trigger: GTTGATAGGTGCAGGAAACCACCATGGCACATGTTT...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GTTGTAAATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCGGGGGAAGCGGTAGTTaGCGTGGCGCTGCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: VVNDGEMARIAKVIICCIGGSGS*RGAALG
Trigger: CCCTAACGCAGCGCCACGCCAACTACCGCTTCCCCC...GATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATTTACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677877.1
3UTR CAA 72 bp GTAGGGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGEASFFHQPKI*GVLSCNKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SLHRNLLHSGTQRSNNESPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...GCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QCCTGASRQGTSVFFTSKPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...CTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GPMMDQLKLHQGFIAASIAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR TCA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTGCATACTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: VCGSMPGGPGSQTLNGAYSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...GTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSCNKVWEAAFTALSILATSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGGCGTCATCAAGGTCCTaGGTGATAAAGAATTTATCA +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWASSRS*VIKNLS
Trigger: TGATAAATTCTTTATCACTCAGGACCTTGATGACGC...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGGGAATACAGAAGAAGTaGAGGATCTCTTCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMGIQKK*RISSRR
Trigger: TCTCCTTGAAGAGATCCTTCACTTCTTCTGTATTCC...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp TCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGGATGAGCATTTGGGTTaGTTCCATGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: STLSQAALSLSPNVCSWLDEHLG*FHVFAI
Trigger: AATAGCAAAGACATGGAATCAACCCAAATGCTCATC...CAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACACAAACAGGCAATTATaGCACAGAATACTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNTNRQL*HRILSL
Trigger: AAGGCTTAGTATTCTGTGTCATAATTGCCTGTTTGT...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLHRNLLHSGTQRSNNESRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PFLFNIVLGVLARAIRQERAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GTCTTATCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: VLSVLHNVVQELLGRALQAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...CTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGATAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp AAAGAAAGAATAATGCCTTCAGGCCTAGACTGCCTAGACTGCTCTGCCACTGATGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: KERIMPSGLDCLDCSATDAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...ATCAGTGGCAGAGCAGTCTAGGCAGTCTAGGCCTGAAGGCATTATTCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp CTTTCCAGCTTGAAAAGGCTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSLKRLWSVFMFQSSDCFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...GCAGTCAGAGCTCTGAAACATAAACACGGACCACAGCCTTTTCAAGCTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp GGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GYKTQPPEGLGLGSENCWQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: YFSSQWCRFGPWDFSTVAQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LSCNKVWEAAFTALSILAQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATATACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: GVLSCNKVWEAAFTALSIYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...TATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGTACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCATACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: CHHVVKRSKVCGSMPGGPYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...TGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp ACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGAAACAAGCCCAGACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: TYTFSEAVPTFFPVKQAQTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...CTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: LVWLPLLCSQLHTHQFLCWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...GCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: AHKQNSMISQLKGVERVSWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVWLPLLCSQLHTHQFLCRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...GCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: AHDGPTQASSGLHCSLHRRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...TCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYQEAER*GLAVSP
Trigger: TGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCCTATTCAAGCAGAAATaGAAGAGAGGAAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCLFKQK*KRGKST
Trigger: GGTGGACTTTCCTCTCTTGCATTTCTGCTTGAATAG...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGGGGAAAAACGTTACATaGTCATGGATAGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWGKNVT*SWIGRI
Trigger: GATTCTTCCTATCCATGAGCATGTAACGTTTTTCCC...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTTGGTTTTCTGTTCCTaGATTAGTTTGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTLVFCS*ISLLRI
Trigger: TATCCTCAGCAAACTAATGCAGGAACAGAAAACCAA...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTAGGGCCCAGCACCCATaGTGCAGGGAGCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGRAQHP*CRELKN
Trigger: ATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGCCCT...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR GCA 90 bp GTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTGCATACCATGACTCCATCACTTaGCAGCTGTGTGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: VCGSMPGGPGSQTLNGAYHDSIT*QLCDLG
Trigger: TCCAAGGTCACACAGCTGGCAAGTGATGGAGTCATG...GTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCQDRCS*QVCRSA
Trigger: TGCGCTGCGACACACCTGCCAACTGCACCTATCTTG...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGIPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR CCA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp TGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CLFPGWVLLLIPVVVSQTSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...AGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTCCGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: SFPWLGPVTHPCGSLSNSGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GGAGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp AAAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: KILGVLSCNKVWEAAFTASVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACAAGCCCAGTTCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCGTTGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: TSPVPAQHIMHPPSHCLVGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...AACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACTGGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LKLHQGFIAASIETSYIVSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: AHKQNSMISQLKGVERVSQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAACGTTACATGCTCATaGATAGGAAGAATCAATATC +
Preference number: 4 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCNVTCS*IGRINI
Trigger: GATATTGATTCTTCCTATCCATGAGCATGTAACGTT...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAAAATGGATAAATTCCTaGATGCATACACACTCCCAA +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFAKWINS*MHTHSQ
Trigger: TTGGGAGTGTGTATGCATCCAGGAATTTATCCATTT...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGCACATGAATATCTTCTaGGAAGTGTCTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTHMNIF*EVSVHV
Trigger: AACATGAACAGACACTTCCCAGAAGATATTCATGTG...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTAACACTAGGCATAAATaGGTTAAGCCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCNTRHK*VKPRMH
Trigger: ATGCATTCTGGGCTTAACCCATTTATGCCTAGTGTT...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ATTCATAAGAAAACCATAATCTCTCCAGTCACCCTCCAGTTTGTTCCTCAGATGCCACAAGCGTCTGCCTaGGGGGAAGCGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: IHKKTIISPVTLQFVPQMPQASA*GEAVVG
Trigger: GCCAACTACCGCTTCCCCCCAGGCAGACGCTTGTGG...CATCTGAGGAACAAACTGGAGGGTGACTGGAGAGATTATGGTTTTCTTATGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp AAAGAAAGAATAATGCCTTCAGGCCTAGACTGCCTAGACTGCTCTGCCACTGATTTGGAACGCCGAGGTTaGGGGAATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KERIMPSGLDCLDCSATDLERRG*GNHLRP
Trigger: TGGCCTCAAGTGATTCCCCCAACCTCGGCGTTCCAA...ATCAGTGGCAGAGCAGTCTAGGCAGTCTAGGCCTGAAGGCATTATTCTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR TCA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR TCA 90 bp CTGTGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCHHVVKRSKVCGSMPGGAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...ACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAACTATTCCAAACAATTaGAAAGGAGGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKTIPNN*KGGTPP
Trigger: GGGAGGAGTCCCTCCTTTTCAATTGTTTGGAATAGT...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAAACAGGATACCACCACTaGTCTCACAGAAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQTGYHH*SHRSTN
Trigger: GTTTGTACTTCTGTGAGATCAGTGGTGGTATCCTGT...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTGATGAGCATTTGGGTTaGTTCCATGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: SVQEGSCLGGRSPGLLCIDEHLG*FHVFAI
Trigger: AATAGCAAAGACATGGAATCAACCCAAATGCTCATC...AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GAGTCACGTTCAAATTGTTGCCCAAGGCCTTTAAAGGGCTGCCTAAAATTTCTAAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ESRSNCCPRPLKGCLKFLRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...TAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATTTGAACGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTCCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SFPWLGPVTHPCGSLSNSAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GGAGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp CAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: QLHTHQFLCGSGSSHSHPSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...GGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp GGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: GRSTLSQAALSLSPNVCSSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...TGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTTCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCGAGTCCTTTCCCTATTaGTTCTTTTTGTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCESFPY*FFLSAL
Trigger: CAAAGCTGACAAAAAGAAGCAATAGGGAAAGGACTC...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACACAGTTTCAATTTTCTaGATATGGCTAGCCAGATAT +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNTVSIF*IWLARY
Trigger: ATATCTGGCTAGCCATATGCAGAAAATTGAAACTGT...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTTCTGTTCATGTTCTTTaGCAACTTTTTAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: QVGPHCRRLLCLLAPTSVSVHVL*QLFNGA
Trigger: AGCCCCATTAAAAAGTTGGCAAAGAACATGAACAGA...AACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTATTAACCCATTTATaGCAGAGGTTGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNVLTHL*QRLQFV
Trigger: AACAAATTGCAACCTCTGGCATAAATGGGTTAATAC...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAATTCAGCAGTCAGTGGTaGAGGTTTGGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SAIAHKQNSMISQLKGVEFSSQW*RFGLFL
Trigger: CAGGAAAAGCCCAAACCTGCACCACTGACTGCTGAA...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678520.1
CDS-3UTR GCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATGCCCAGCACCCATGCTaGAGGGAGCTTAAAAATATA +
Preference number: 4 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHAQHPC*RELKNI
Trigger: TATATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGC...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR GCA 90 bp GGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGAGTGTCCAGTTCCCATaGTCTGTCAGTATGCCATAT +
Preference number: 4 (lower is better)
Translates to: GYKTQPPEGLGLGSENCWSVQFP*SVSMPY
Trigger: ATATGGCATACTGACAGAGCATGGGAACTGGACACT...CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR GCA 90 bp GGCTGCCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACCTAGACTGCCTAGACTaGTCTGCCACTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCLKFLAVLIGVLPFFRYLDCLD*SATDWL
Trigger: CAGCCAATCAGTGGCAGAGCAGTCTAGGCAGTCTAG...GTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCCCGCTGGAGCCCACCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVPLEPT*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGG...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR CCA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp AAGCCAAACTTTAAATGGTGCATACTCCTGGAGCCCTACTGCAGTTCAAGGAGGCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: KPNFKWCILLEPYCSSRRLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...CCTCCTTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATTTAAAGTTTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CTGAGATTCAGTGCTCGAAGGTGCTCAAAGAGAACTCGGTTTCGAAGATCTAAGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LRFSARRCSKRTRFRRSKSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CTTAGATCTTCGAAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: LNCTLISSSADPEVAILTTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTTTCCAGCTTGAAAAGGCTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: LSSLKRLWSVFMFQSSDCQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...GCAGTCAGAGCTCTGAAACATAAACACGGACCACAGCCTTTTCAAGCTGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAATCTGGCCAGAGGTACTaGAGGTCTATAATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKSGQRY*RSIICR
Trigger: TCTACAGATTATAGACCTCCAGTACCTCTGGCCAGA...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAGACACATAGACCAGTaGAAGAGAATGAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: EGSCLGGRSPGLLCILHARHIDQ*KRMKIS
Trigger: TGAGATCTTCATTCTCTTCCACTGGTCTATGTGTCT...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGCAAAAAGAACAAACCTaGAGGCATCATGCTATCTTT +
Preference number: 4 (lower is better)
Translates to: TLSQAALSLSPNVCSWLWQKEQT*RHHAIF
Trigger: AAAGATAGCATGATGCCTCCAGGTTTGTTCTTTTTG...CCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTCAAAAAGAACAAACCTaGAGGCATCATGCTATCTTT +
Preference number: 4 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGQKEQT*RHHAIF
Trigger: AAAGATAGCATGATGCCTCCAGGTTTGTTCTTTTTG...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACAACGTTACATGCTCATaGATAGGAAGAATCAATATC +
Preference number: 4 (lower is better)
Translates to: AATGRSTLSQAALSLSPNNVTCS*IGRINI
Trigger: GATATTGATTCTTCCTATCCATGAGCATGTAACGTT...GTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCACATTGTGACATGAGATaGTATCTCATTGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: GVFRRAAALEVGHQDSFAHCDMR*YLIVIL
Trigger: CAAAATCACAATGAGATACCATCTCATGTCACAATG...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTTAGCATTCCAGAAATaGAACACTAGGCATAAATGG +
Preference number: 4 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCLAFQK*NTRHKW
Trigger: CCATTTATGCCTAGTGTTCCATTTCTGGAATGCTAA...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACCCTCCAGTTTGTTCCTCAGATGTGGCAAATCATATATCCCCACAGTTCCCAGTGGTCCAGATCGGACTaGAGAACCAAACGATTGCAG +
Preference number: 4 (lower is better)
Translates to: TLQFVPQMWQIIYPHSSQWSRSD*RTKRLQ
Trigger: CTGCAATCGTTTGGTTCTCCAGTCCGATCTGGACCA...CTGGGAACTGTGGGGATATATGATTTGCCACATCTGAGGAACAAACTGGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp GGCTGCCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACTTAATCCCAGCACTTTaGAACGCCGAGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GCLKFLAVLIGVLPFFRYLIPAL*NAEVGG
Trigger: TCCCCCAACCTCGGCGTTCCAAAGTGCTGGGATTAA...GTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR CAA 72 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTaGCATGCAAATAAAGACTCCAGAAGGGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLGGRSPGLLCI*HANKDSRRDCS
Trigger: GCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR TCA 90 bp TGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: WLPLLCSQLHTHQFLCGSLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RCWQMQNLLLYFSSQWCRQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...CCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp ACAAGCCCAGTTCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCGTTAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSPVPAQHIMHPPSHCLVKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...AACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACTGGGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCTATTCAGGGATCTTCTaGCACATGTATCTGCAATTT +
Preference number: 4 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCYSGIF*HMYLQF
Trigger: AAATTGCAGATACATGTGTCAGAAGATCCCTGAATA...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGACAAACAGGCAATTATaGCACAGAATACTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMTNRQL*HRILSL
Trigger: AAGGCTTAGTATTCTGTGTCATAATTGCCTGTTTGT...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTGAGATTCAGTGCTCGAAGGTGCTCAAAGAGAACTCGGTTTCGAAGATCTAAGTCTGGTGGGAAATGCTaGGATTCAGTGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRFSARRCSKRTRFRRSKSGGKC*DSVLEG
Trigger: ACCTTCGAGCACTGAATCTCAGCATTTCCCACCAGA...CTTAGATCTTCGAAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp AAGAGTCCCTCAACAGATGCTCTATTTAATAACCAGTTTGTTCCTCAGATGTGGAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSPSTDALFNNQFVPQMWRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...CCACATCTGAGGAACAAACTGGTTATTAAATAGAGCATCTGTTGAGGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677468.1
ENST00000677796.1
CDS-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR GCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KVAMSFPWLGPVTHPCGSQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...ACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp CTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LQSQDVGKCKIFCCISAVRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGTTGCAATGTCTTTTCCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: ASRQGTSVFFTSKLQCLFRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GAAAAGACATTGCAACTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCATTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QASSGLHCSLHRNLLHSGLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...ACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LNCTLISSSADPEVAILTSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CACAGCCTTGAGCATACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATTGTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSLEHTGYKTQPPEGLGLCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...CAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCATCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: EGSCLGGRSPGLLCILHASPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: SVQEGSCLGGRSPGLLCISPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKAVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKQEAER*GLAVSP
Trigger: TGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAGATACAAAATCAATGTaGAGAAGTCACCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKDTKSM*RSHQDP
Trigger: GGGATCCTGGTGACTTCTGCACATTGATTTTGTATC...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGGTATTAACCCATTTATaGCAGAGGTTGCAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RSTLSQAALSLSPNVCSWVLTHL*QRLQFV
Trigger: AACAAATTGCAACCTCTGGCATAAATGGGTTAATAC...CCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCTCATCCTTTTGCCTTTaGCAACAACAGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALSSFCL*QQQPAA
Trigger: TGCAGCTGGCTGTTGTTGGCAAAGGCAAAAGGATGA...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp GGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAAGTGGTCACCTTGCTaGCCTCTTCTTTATACCAGT +
Preference number: 4 (lower is better)
Translates to: GKQASSTSPKSWAYFPAIKWSPC*PLLYTS
Trigger: ACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTT...TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS-3UTR CCA 90 bp ATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTACCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: IRKKSKNLGSYQFYTMLYQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...GTACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CCA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: LKLHQGFIAASIETSYIVGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: CSGGSHHILQKQLPWAHDCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...ATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FVVEEVIIYFKSNCHGPMCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...CATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCAAGCTTCACTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: HILQKQLPWAHDGPTQASLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...TGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: AHDGPTQASSGLHCSLHRGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...TCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAACTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACACGATACCATCTTTCTaGCCAGAGGTACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLGGRSPGLLCILHANKDTIPSF*PEVLEV
Trigger: GACCTCCAGTACCTCTGGCCAGAAAGATGGTATCGT...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCACACATGAATATCTTCTaGGAAGTGTCTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: EGSCLGGRSPGLLCILHAHMNIF*EVSVHV
Trigger: AACATGAACAGACACTTCCCAGAAGATATTCATGTG...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GTTGTAAATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCCAGTCAAGATGCTCTaGCCACCCACAAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VVNDGEMARIAKVIICCIPVKML*PPTSVC
Trigger: GCAGACGCTTGTGGGTGGCCAGAGCATCTTGACTGG...GATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATTTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CCA 90 bp CAGACAAGCAGGCTCAAGCAAGAAATTCATAAGAAAACCATAATCTCTCCAGTCTTAACTTCGCGAGCCTaGCGGGGAAGAAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTSRLKQEIHKKTIISPVLTSRA*RGRRSP
Trigger: TGGGGACCTTCTTCCCCGCCAGGCTCGCGAAGTTAA...GACTGGAGAGATTATGGTTTTCTTATGAATTTCTTGCTTGAGCCTGCTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR TCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTGCGCTCTCGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SDRARLALRFSDYRHCALAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: LSCNKVWEAAFTALSILALRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCACTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: CHHVVKRSKVCGSMPGGPLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...TGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp TTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAGTCCCACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSNRTDKIDTMNISPVPQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: IETSYIVVLRGVITKAVFPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: VAATAMLSIAHSSVPLRILLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...GATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp CTCCCATTCTTCAGGTACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGGAACTCCGGCCTGGATaGCAGAATCAGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LPFFRYLCCLGSFSLFTMELRPG*QNQIHS
Trigger: AGAATGGATCTGATTCTGTCATCCAGGCCGGAGTTC...CATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR TCA 90 bp CAGGTACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGGTGCAGAGAATTAACTaGCTCATGAGTCACGTTCAA +
Preference number: 4 (lower is better)
Translates to: QVPMLPWLFQSFYHACLGVQRIN*LMSHVQ
Trigger: TTGAACGTGACTCATGAGTCAGTTAATTCTCTGCAC...CCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR GCA 90 bp CAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCCGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QFPFTTDADHYEILEGIPAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GGGTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: VITKAVFLHFAWRISACVAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TTTGGGCCTTGGGATTTTTCGACTGTGGCCACCACTTCTCCTAATCATATCTCCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FGPWDFSTVATTSPNHISAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GGAGATATGATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCCAAGGCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp TTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAGTCCCACGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LVSNRTDKIDTMNISPVPRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...TGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCATTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KAVFLHFAWRISACVGEALGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RHTLQFRNWCGCHCYALNLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GCAGGTTTGGGCCTTGGGATTTTTCGACTGTGGCCACCACTTCTCCTAATCATATGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGLGLGIFRLWPPLLLIICYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...TATGATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCAAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: KAVFLHFAWRISACVGEARNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CTGAGATTCAGTGCTCGAAGGTGCTCAAAGAGAACTCGGTTTCGAAGATCTAAGAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRFSARRCSKRTRFRRSKRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...CTTAGATCTTCGAAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAATCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAATCACCAGGACTCCTTTaGATTTTGCATGCAAATAAA +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQSPGLL*ILHANK
Trigger: TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGA...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGGAGGTACCTGCGATATaGAATGGGAACCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEEVPAI*NGNQSS
Trigger: AGAACTTTGGTTCCCATTGCATATCGCAGGTACCTC...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAAGACAGTAGTTTCTTTTaGTGTGCAGAGCTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQDSSFF*CAELFS
Trigger: ACTAAAGAGCTCTGCACAGCAAAAGAAACTACTGTC...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGAAGTGGTCACCTTGCTaGCCTCTTCTTTATACCAGT +
Preference number: 4 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRKWSPC*PLLYTS
Trigger: ACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTT...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGAAGATAAACCTATGGTaGTTTCAATACTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMKINLW*FQYLFP
Trigger: TGGGAACAAGTATTGAAAGCACCATAGGTTTATCTT...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679032.1
CDS-3UTR GCA 90 bp CTTTCCAGCTTGAAAAGGCTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCTTCAGTGCTCGAAGGTaGTCAAAGAGAACTCGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSLKRLWSVFMFQSSDCFSARR*SKRTRF
Trigger: AAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAA...GCAGTCAGAGCTCTGAAACATAAACACGGACCACAGCCTTTTCAAGCTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAQDRCS*QVCRSA
Trigger: TGCGCTGCGACACACCTGCCAACTGCACCTATCTTG...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CCA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAACAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKQLTSR*EPLEPT
Trigger: GGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTG...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAAGGGTCTCTGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: AHKQNSMISQLKGVERVSGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...AGAGACCCTTTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: GKQASSTSPKSWAYFPAIGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp AAAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: KILGVLSCNKVWEAAFTALQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAAATGATGCTCACAGACTaGAATTTACCAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQMMLTD*NLPGNP
Trigger: TGGATTTCCTGGTAAATTCCAGTCTGTGAGCATCAT...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAGCAGGAAACAAGACCATTATTCGGCAGGAAAGAGCTAGAAGATAGCAATCAGATTCCCCGTGAAAACTaGCACAAGACAAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: EQETRPLFGRKELEDSNQIPREN*HKTRMP
Trigger: GGGCATCCTTGTCTTGTGCCAGTTTTCACGGGGAAT...CTGATTGCTATCTTCTAGCTCTTTCCTGCCGAATAATGGTCTTGTTTCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGGATAAACATGTGCCATaGTGGTTTCCTGCACCTATC +
Preference number: 4 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEDKHVP*WFPAPI
Trigger: GATAGGTGCAGGAAACCACCATGGCACATGTTTATC...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCCCGTGTTGCCCAGGCTaGTCTCAAACTCTAGGACTC +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAPCCPG*SQTLGL
Trigger: GAGTCCTAGAGTTTGAGACCAGCCTGGGCAACACGG...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTCACTATTCAAACCTTaGTCAGTGTCCAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPSLFKP*SVSSSH
Trigger: ATGGGAACTGGACACTGACCAAGGTTTGAATAGTGA...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR CCA 90 bp CTCCCATTCTTCAGGTACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGTGCTCTGCCACTGATTaGCTGTGTGATCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LPFFRYLCCLGSFSLFTMCSATD*LCDPEQ
Trigger: TTGCTCAGGATCACACAGCCAATCAGTGGCAGAGCA...CATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR CAA 72 bp ACTGGCTACAAGACACAACCTCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGGTTAGTATACGGATTC +
Preference number: 4 (lower is better)
Translates to: TGYKTQPPEGLG*GSENCWLVYGF
Trigger: GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCGCTGTATCCAGCTTCTaGAGGTACACCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCAVSSF*RYTTTF
Trigger: AAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGC...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR TCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGIPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR TCA 90 bp ACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGACTTGCACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TVNSMSNHPLISDRARLAQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TGCAAGTCTGGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAACTTAAAACTTCAACATaGGCCCATGCAACATTAAAC +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKLKTST*AHATLN
Trigger: GTTTAATGTTGCATGGGCTCATGTTGAAGTTTTAAG...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTCAGGCTTACCAAAGCTaGAAGAAGTCAGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTQAYQS*KKSALN
Trigger: GTTTAGAGCTGACTTCTTTCAGCTTTGGTAAGCCTG...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACCACTACTCAAGGAAATaGGAGAGGACACAAACGAAG +
Preference number: 4 (lower is better)
Translates to: CLGGRSPGLLCILHANKDHYSRK*ERTQTK
Trigger: CTTCGTTTGTGTCCTCTCTCATTTCCTTGAGTAGTG...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSERAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
CDS-3UTR GCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR GCA 90 bp AAAGAAAGAATAATGCCTTCAGGCCTAGACTGCCTAGACTGCTCTGCCACTGATGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KERIMPSGLDCLDCSATDAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...ATCAGTGGCAGAGCAGTCTAGGCAGTCTAGGCCTGAAGGCATTATTCTTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp AAGCCAAACTTTAAATGGTGCATACTCCTGGAGCCCTACTGCAGTTCAAGGAGGAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: KPNFKWCILLEPYCSSRRSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...CCTCCTTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATTTAAAGTTTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ILGVLSCNKVWEAAFTALFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...CAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCATTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp TTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FVVEEVIIYFKSNCHGPMLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...CATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: KCKIFCCISAVSGAGLGLCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...AAGGCCCAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CTTTCCAGCTTGAAAAGGCTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSLKRLWSVFMFQSSDCSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...GCAGTCAGAGCTCTGAAACATAAACACGGACCACAGCCTTTTCAAGCTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp GCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCATACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: ASIETSYIVVLRGVITKAYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...TGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HDGPTQASSGLHCSLHRNCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...GTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TGTGCTATGTTGACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CAMLTYTFSEAVPTFFPVCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...CACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGTCAACATAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: FVVEEVIIYFKSNCHGPMRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...CATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAAACCTGGAGGCATCATaGTATCTTTCATACTATACT +
Preference number: 4 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKNLEAS*YLSYYT
Trigger: AGTATAGTATGAAAGATAGCATGATGCCTCCAGGTT...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATTGTGATTTTGATATaGACGTCTCTAATGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RAAALEVGHQDSFAFCMQIVILI*TSLMVS
Trigger: ACTGACCATTAGAGACGTGCATATCAAAATCACAAT...TTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CTGAGATTCAGTGCTCGAAGGTGCTCAAAGAGAACTCGGTTTCGAAGATCTAAGAATGCTGAGATTCAGTaGTCGAAGGTGCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRFSARRCSKRTRFRRSKNAEIQ*SKVLKE
Trigger: CTCTTTGAGCACCTTCGAGCACTGAATCTCAGCATT...CTTAGATCTTCGAAACCGAGTTCTCTTTGAGCACCTTCGAGCACTGAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp TTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAGTCCCATGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVSNRTDKIDTMNISPVPCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...TGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SETQNVKVKFPSMQLVSLCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...CAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp TTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAGTCCCATCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LVSNRTDKIDTMNISPVPSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...TGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCAAGCTTCAACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: HILQKQLPWAHDGPTQASTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...TGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCAAGCTTCATCAGTGGTGCAGGTTTaGGCTTTTCCTGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: HILQKQLPWAHDGPTQASSVVQV*AFPENS
Trigger: AGAATTCTCAGGAAAAGCCCAAACCTGCACCACTGA...TGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678520.1
CDS-3UTR CCA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCGCAATGTCTTTTCCCTaGCTGGGTCCTGTTACTCAT +
Preference number: 4 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFAMSFP*LGPVTH
Trigger: ATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGC...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCCCACCTTCTTTCCGGTaGAACAAGCCCAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVPPSFR*NKPSSG
Trigger: GCCGGAACTGGGCTTGTTTCACCGGAAAGAAGGTGG...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGITAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSETAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKATAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATTATTGCTCACCTACTGAAGACTAAGCAATACTCCCAAATACAAGATACACACACTGCCATGGGCCCATaGTGGACCAACTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IIAHLLKTKQYSQIQDTHTAMGP*WTNSSF
Trigger: GAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGT...GTGTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR TCA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SGLHCSLHRNLLHSGTQRKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...CCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTGCATACAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: VCGSMPGGPGSQTLNGAYKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGAGTTTTGGTCTTCAATaGAAAAACCCTGGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: IPLPVPMCSIVQLPLISESFGLQ*KNPGLG
Trigger: GCCTAAACCAGGGTTTTTTCATTGAAGACCAAAACT...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCACATTACAGCATGGCATaGAAGCAGAGGTACCTGCGA +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSHYSMA*KQRYLR
Trigger: TCGCAGGTACCTCTGCTTTCATGCCATGCTGTAATG...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTGGAATACAGAAGAAGTaGAGGATCTCTTCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTGIQKK*RISSRR
Trigger: TCTCCTTGAAGAGATCCTTCACTTCTTCTGTATTCC...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTCAGAGAGCAAAATCATaGATGAACTCCCATTCCCAA +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTQRAKS*MNSHSQ
Trigger: TTGGGAATGGGAGTTCATTCATGATTTTGCTCTCTG...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp TCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCAGACTTGTTCTCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: SVLHNVVQELLGRALQSFSDLFS*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGAGAACAAGTCTGA...AAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp AAACCCAAAGGGCTTCCACCTATATTATTTGAGCCTCACGATAATCTCTTTGGGGTTTTGAGGTTACAGTaGGCAATGATCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: KPKGLPPILFEPHDNLFGVLRLQ*AMIQPL
Trigger: CAGTGGCTGGATCATTGCTCACTGTAACCTCAAAAC...CCCAAAGAGATTATCGTGAGGCTCAAATAATATAGGTGGAAGCCCTTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR TCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTTGGAGGCCTTCCAATaGTTCCGACCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGLEAFQ*FRPWLC
Trigger: GCATAGCCAGGGTCGGAATCATTGGAAGGCCTCCAA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAGCCCAGCACCCATGCTaGAGGGAGCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKAQHPC*RELRKE
Trigger: CTCTTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGC...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR GCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGCCCAGCACCCATGCTaGAGGGAGCTGAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISAQHPC*RELRKE
Trigger: CTCTTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGC...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCAGGGCCCAGCACCCATaGTGCAGGGAGCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVRAQHP*CRELRK
Trigger: TTTTCTCAGCTCCCTGCAGCATGGGTGCTGGGCCCT...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
CDS-3UTR GCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGAAACAAGCCCAGTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TYTFSEAVPTFFPVKQAQFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...CTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGGGCCTTTACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: KCKIFCCISAVSGAGLGLYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...AAGGCCCAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IETSYIVVLRGVITKAVFTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCAACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RHTLQFRNWCGCHCYALNCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: SETQNVKVKFPSMQLVSLWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...CAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp TATTTAATAACCAGTTTGTTCCTCAGATGTGGCAAATCATATATCCCCACAGTTGTTCAGGAGGGCAGCTaGCTTGGAGGTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: YLITSLFLRCGKSYIPTVVQEGS*LGGRSP
Trigger: TGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC...AACTGTGGGGATATATGATTTGCCACATCTGAGGAACAAACTGGTTATTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677468.1
ENST00000677796.1
CDS-3UTR GCA 90 bp TTCCTGGATGCATACACACTCCCAAGACTGAATCAGGAAGAAGTTGGATCCCTGGAGTCCTTTCCCTATTaGTTCTTTTTGTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FLDAYTLPRLNQEEVGSLESFPY*FFLSAL
Trigger: CAAAGCTGACAAAAAGAAGCAATAGGGAAAGGACTC...CAGGGATCCAACTTCTTCCTGATTCAGTCTTGGGAGTGTGTATGCATCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGGCATAAGCCACTGTaGCCAGCCCTAAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRARHKPL*PALSTE
Trigger: TTCTGTACTTAGGGCTGGGCACAGTGGCTTATGCCT...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACC +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYSKWSP*CPLLYT
Trigger: GGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp ATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACCTATGTTGCCTTCTTTTTACCATGCCTaGCTAGGGTTTTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: ISSSPHRCSPILQVPMLPSFYHA*LGFLTQ
Trigger: CTGCGTCAAAAACCCTAGGCAGGCATGGTAAAAAGA...AGGCAACATAGGTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp GGCTGCCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACAGGCCTTTAAAGGGCTaGCTAAAATTTCTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: GCLKFLAVLIGVLPFFRYRPLKG*LKFLAV
Trigger: GACTGCTAGAAATTTTAGGCAGCCCTTTAAAGGCCT...GTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACAGGTATGTGGCAGCATaGCAGGAGGTCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYRYVAA*QEVQEA
Trigger: GGCTTCCTGGACCTCCTGGCATGCTGCCACATACCT...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp AACTCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCGGCTATGCCTTCCAGTaGTGTTTCTGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: NSETQNVKVKFPSMQLVSGYAFQ*CFCATM
Trigger: CATGGTGGCACAGAAACAGCACTGGAAGGCATAGCC...GGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGQDRCS*QVCRSA
Trigger: TGCGCTGCGACACACCTGCCAACTGCACCTATCTTG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
CDS-3UTR CCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCATCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp TCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SETQNVKVKFPSMQLVSLSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...CAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGATGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HPLISDRARLALRFSDYRCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTATATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VITKAVFLHFAWRISACVYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAACCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SAIAHKQNSMISQLKGVEPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRALPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp AGTTGCAGTCCAAGACTTCTGAATGGCATTGATAGCTTTCACAAAGTTGTGATCCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: SCSPRLLNGIDSFHKVVILPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...GATCACAACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PPEGLGLGSENCWLVYGFFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCCGCCTTCACAGCCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYPPSQP*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGGCTGTGAAGGCGG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678915.1
3UTR CAA 72 bp AACATGTGGTGGTTGGTTTTCTGTTCCTGCATTAGTTaGCTGAGGATAACAGCTTCCAACTCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: NMWWLVFCSCIS*LRITASNSIHV
Trigger: GACATGGATGGAGTTGGAAGCTGTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCAAGACACAACCTCCTaGGGGCTTAGGATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSQDTTS*GLRIGV
Trigger: GACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCCGCCTTCACAGCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYPPSQP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TGTGCTATGTTGACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: CAMLTYTFSEAVPTFFPVLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...CACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGTCAACATAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR TCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCAAGTTTTGGTCTTCAATaGAAAAACCCTGGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPSFGLQ*KNPGLG
Trigger: GCCTAAACCAGGGTTTTTTCATTGAAGACCAAAACT...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp TTCCTGGATGCATACACACTCCCAAGACTGAATCAGGAAGAAGTTGGATCCCTGTCCACCCAGACAATATaGATTAAACATAACCCCATA +
Preference number: 4 (lower is better)
Translates to: FLDAYTLPRLNQEEVGSLSTQTI*IKHNPI
Trigger: TATGGGGTTATGTTTAATTCATATTGTCTGGGTGGA...CAGGGATCCAACTTCTTCCTGATTCAGTCTTGGGAGTGTGTATGCATCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGGAGCAAAATCATGAATaGACTCCCATTCCCAATAGC +
Preference number: 4 (lower is better)
Translates to: PFLFNIVLGVLARAIRQEEQNHE*TPIPNS
Trigger: GCTATTGGGAATGGGAGTTCATTCATGATTTTGCTC...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCACAGATAATATCATACTaGATGGGCAAAAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPQIISY*MGKSWK
Trigger: CTTCCAGCTTTTGCCCATTCAGTATGATATTATCTG...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGTATTCAGGGATCTTCTaGCACATGTATCTGCAATTT +
Preference number: 4 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEYSGIF*HMYLQF
Trigger: AAATTGCAGATACATGTGTCAGAAGATCCCTGAATA...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTGGGCGTACTTTCCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYWAYFP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGAAAGTACGCCCA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678464.1
CDS-3UTR TCA 90 bp GGCTGCCTAAAATTTCTAGCAGTCCTCATAGGTGTTCTCCCATTCTTCAGGTACAAGAGAACACAGAAATaGTATAGTCTTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GCLKFLAVLIGVLPFFRYKRTQK*YSLGGQ
Trigger: TTGTCCCCCAAGACTATATCATTTCTGTGTTCTCTT...GTACCTGAAGAATGGGAGAACACCTATGAGGACTGCTAGAAATTTTAGGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR TCA 90 bp CTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCTTATTCTCCTGTTACATTATGTTTCAGAGCTCTaGCTGCCTTATTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LWSVFMFQSSDCLILLLHYVSEL*LPYSPV
Trigger: AACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATA...ATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATAAACACGGACCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACGCAGGTCAAGATAGGTaGAGTTGGCAGGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYAGQDR*SWQVCR
Trigger: GCGACACACCTGCCAACTGCACCTATCTTGACCTGC...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: IETSYIVVLRGVITKAVFQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACGGCCCAACACATCATaGACCCACCCAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKRPNTS*THPVIV
Trigger: GACAATGACTGGGTGGGTGCATGATGTGTTGGGCCG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCATACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTAGTCATTCAACACAATCTCAAAGCCTTGGTTGTAAATGATGGTGAAATGGCCTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: VVIQHNLKALVVNDGEMAWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...GGCCATTTCACCATCATTTACAACCAAGGCTTTGAGATTGTGTTGAATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
CDS-3UTR GCA 90 bp GGATGCTTGGTTTCGAACAGGACTGACAAAATTGATACCATGAACATTTCTCCATGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: GCLVSNRTDKIDTMNISPWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...TGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTGACAGTAGTTTCTTTTaGTGTGCAGAGCTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTDSSFF*CAELFS
Trigger: ACTAAAGAGCTCTGCACAGCAAAAGAAACTACTGTC...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCAAATAAGAGTAACTACTaGCTAGATGGATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: KAVFLHFAWRISACVGEANKSNY*LDGSHS
Trigger: GCTATGGGATCCATCTAGGCAGTAGTTACTCTTATT...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR GCA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTTCAGTCTTTTTACCATaGCTGCCTAGGGTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: TYVALALSVFLPCLPRVFSVFLP*LPRVFD
Trigger: GTCAAAAACCCTAGGCAGGCATGGTAAAAAGACTGA...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTTTCAGGTACCTATGTTaGCTTGGCTCTTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TYVALALSVFLPCLPRVFFRYLC*LGSFSL
Trigger: AAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAA...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGATCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HPLISDRARLALRFSDYRSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: VITKAVFLHFAWRISACVGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAATGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSECRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKACRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGACTTGCATATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVNSMSNHPLISDRARLAYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...TGCAAGTCTGGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp TCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: SVLHNVVQELLGRALQSFGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...AAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCACCTAGGTATTAACCCACTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: MCHGGFLHLSTHHLGINPLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...TGGGTTAATACCTAGGTGATGAGTTGATAGGTGCAGGAAACCACCATGGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCLLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCACACTCCATTACAGCATaGCATGAAAGCAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKAHSITA*HESRGT
Trigger: GGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTG...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTTTTTCTTGTGGTCCTaGAAGACCCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGFFLWS*KTQVPS
Trigger: GCTGGGCACCTGGGTCTTCCAGGACCACAAGAAAAA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTTGTGTGGGTCACTGCTaGTTCATTATAAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTCVGHC*FIIKFG
Trigger: TCCAAACTTTATAATGAACCAGCAGTGACCCACACA...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679032.1
3UTR CAA 72 bp GTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTaGGTTTTCTGTTCCTGCATTAGTTTGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: VQLPLISENMWW*VFCSCISLLRI
Trigger: TATCCTCAGCAAACTAATGCAGGAACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCGCTGTATCCAGCTTCTaGAGGTACACCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAAVSSF*RYTTTF
Trigger: AAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGC...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp ATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCAGCTTCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: MMVKWPELPRSSYAVSSFLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GAAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
CDS-3UTR TCA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR TCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKASAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCACTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: KAVFLHFAWRISACVGEALLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAACTCCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: EVIIYFKSNCHGPMMDQLLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...GAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCAGATGGATTTACAGTTaGATTCTACCAGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCRWIYS*ILPEVQ
Trigger: TTGTACCTCTGGTAGAATTCAACTGTAAATCCATCT...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAACAGGATACCACCACTaGTCTCACAGAAGTACAAAC +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKATGYHH*SHRSTN
Trigger: GTTTGTACTTCTGTGAGATCAGTGGTGGTATCCTGT...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCATGCAACACTTACCTTaGGCATACTGGCTACAAGAC +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAMQHLP*AYWLQD
Trigger: GTCTTGTAGCCAGTATGCTCAAGGTAAGTGTTGCAT...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp AGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGGTTTGGGCTTTTCCTaGGAATTCTTAAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SPKMLANAKSFAVFQQSVGLGFS*EFLRCA
Trigger: AGCACACCTTAAGAATTCTCAGGAAAAGCCCAAACC...CACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678520.1
CDS-3UTR TCA 90 bp AAAGAAAGAATAATGCCTTCAGGCCTAGACTGCCTAGACTGCTCTGCCACTGATGAATTAACTGACTCATaGGTCACGTTCAAATTGTTG +
Preference number: 4 (lower is better)
Translates to: KERIMPSGLDCLDCSATDELTDS*VTFKLL
Trigger: CAACAATTTGAACGTGACTCATGAGTCAGTTAATTC...ATCAGTGGCAGAGCAGTCTAGGCAGTCTAGGCCTGAAGGCATTATTCTTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR GCA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp AGTTGCAGTCCAAGACTTCTGAATGGCATTGATAGCTTTCACAAAGTTGTGATCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SCSPRLLNGIDSFHKVVIAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GATCACAACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: HPLISDRARLALRFSDYRQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTTCAGCAGTCAGTGGTaGAGGTTTGGGCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKFSSQW*RFGPWD
Trigger: ATCCCAAGGCCCAAACCTGCACCACTGACTGCTGAA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATATGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGICMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKACMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGITHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSETHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATTATTGCTCACCTACTGAAGACTAAGCAATACTCCCAAATACAAGATACACACACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IIAHLLKTKQYSQIQDTHTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...GTGTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAATGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTAACCTGGAGGCATCATaGTATCTTTCATACTATACT +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTNLEAS*YLSYYT
Trigger: AGTATAGTATGAAAGATAGCATGATGCCTCCAGGTT...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCATCCCATTCTGTTGGTTaGCTGTTCACTCTGACAGTA +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKASHSVG*LFTLTV
Trigger: TACTGTCAGAGTGAACAGGCAACCAACAGAATGGGA...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTTGGTTTTCTGTTCCTaGATTAGTTTGCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: CLGGRSPGLLCILHANKDLVFCS*ISLLRI
Trigger: TATCCTCAGCAAACTAATGCAGGAACAGAAAACCAA...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGAAGCTAAGCCACCTTaGACAGCTCACAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGEAKPP*TAHKAA
Trigger: TGCAGCTTTGTGAGCTGTGCAAGGTGGCTTAGCTTC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATATCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGISRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTGCAGGTTTGGGCCTTaGGATTTTTCGACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSCRFGP*DFSTVA
Trigger: GGCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTACTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: IRKKSKNLGSYQFYTMLYSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GTACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKASVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAATATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ATTATTGCTCACCTACTGAAGACTAAGCAATACTCCCAAATACAAGATACACACTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IIAHLLKTKQYSQIQDTHYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GTGTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ACTCCTGGAGCCCTACTGCAGTTCAAGGAGGGTAAAAACATCATTATAGTGAATGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: TPGALLQFKEGKNIIIVNGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...ATTCACTATAATGATGTTTTTACCCTCCTTGAACTGCAGTAGGGCTCCAGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSSCNKV*EAAFTA
Trigger: GGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLHRNLLHSGTQRSNNESFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTAATTCCCCGTGAAAACTaGCACAAGACAAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLIPREN*HKTRMP
Trigger: GGGCATCCTTGTCTTGTGCCAGTTTTCACGGGGAAT...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTAAATGGATAAATTCCTaGATGCATACACACTCCCAA +
Preference number: 4 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTKWINS*MHTHSQ
Trigger: TTGGGAGTGTGTATGCATCCAGGAATTTATCCATTT...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp AGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAATTAGCATTCCAGAAATaGAACACTAGGCATAAATGG +
Preference number: 4 (lower is better)
Translates to: SCLGGRSPGLLCILHANKLAFQK*NTRHKW
Trigger: CCATTTATGCCTAGTGTTCCATTTCTGGAATGCTAA...TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp TCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTGAAGAGCAAGAATCTTaGGTCTTATCAGTTCTACAC +
Preference number: 4 (lower is better)
Translates to: SVLHNVVQELLGRALQSFEEQES*VLSVLH
Trigger: GTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTC...AAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTGTACCTATGTTGCCTTaGCTCTTTCAGTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: TYVALALSVFLPCLPRVFVPMLP*LFQSFY
Trigger: GTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTAC...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACAATGGTGCATACTCCTaGAGCCCTACTGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYNGAYS*SPTAVQ
Trigger: TTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATT...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTCAGCTCAAAGGGGTTaGAAGGGTCTCTTAGACCAG +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSSAQRG*KGLLDQ
Trigger: CTGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGATGTGCATTAGGTGTTaGAGATATACAGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PFLFNIVLGVLARAIRQEMCIRC*RYTGRN
Trigger: ATTTCTCCCTGTATATCTTCAACACCTAATGCACAT...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCAGAGCAAAATCATGAATaGACTCCCATTCCCAATAGC +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSEQNHE*TPIPNS
Trigger: GCTATTGGGAATGGGAGTTCATTCATGATTTTGCTC...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCGGGTTTTGGAGACGATaGTTAGAAGTGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAGFWRR*LEVKLQ
Trigger: TTGGAGTTTCACTTCTAATCATCGTCTCCAAAACCC...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAACAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CCTATTAGAATACTTTTCCTGAGAATTCTTAAGGTGTGCTATGTTGACATACACTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PIRILFLRILKVCYVDIHCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...GTGTATGTCAACATAGCACACCTTAAGAATTCTCAGGAAAAGTATTCTAATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTGCATGGAGAATCAGTaGCTGTGTAGGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYCMENQ*LCRGSK
Trigger: CTTGCTTCCCCTACACAGGCACTGATTCTCCATGCA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTACTTCAAAAGCAACTaGCATGGGCCCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGYFKSN*HGPMMD
Trigger: GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGACTCATCAGTTCCTCTaGGGATCCGGAAGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKTHQFL*GSGSSH
Trigger: ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGT...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATGGTGTGGCTGCCACTaGTATGCTCTCAATTGCACA +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKWCGCH*YALNCT
Trigger: TGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKARNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CACAAACGAAGGGAAAAACGTTACATGCTCATGGATAGGAAGAATCAATATCATGAAAGCAGAGGTACCTaGGATATGCAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: HKRREKRYMLMDRKNQYHESRGT*DMQWEP
Trigger: TGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTC...ATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKSRCSK*SPCCPL
Trigger: AAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGIGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTCAGTGGTGCAGGTTTaGGCCTTGGGATTTTTCGAC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKSVVQV*ALGFFD
Trigger: GTCGAAAAATCCCAAGGCCCAAACCTGCACCACTGA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKYFSSQ*CRFGPW
Trigger: CCAAGGCCCAAACCTGCACCACTGACTGCTGAAATA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTACTGCCACAGGATGCTTaGTTTCGAACAGGACTGACA +
Preference number: 4 (lower is better)
Translates to: NKEEEQESWVLSVLHNVVLPQDA*FRTGLT
Trigger: TGTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAG...TACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CCA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCAAAAGCAACTGCCATaGGCCCATGATGGACCAACT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKQKQLP*AHDGPT
Trigger: AGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTTG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AGTTGCAGTCCAAGACTTCTGAATGGCATTGATAGCTTTCACAAAGTTGTGATCCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SCSPRLLNGIDSFHKVVILQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GATCACAACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SETQNVKVKFPSMQLVSLLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...CAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTACACTCCATTACAGCATaGCATGAAAGCAGAGGTACC +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLHSITA*HESRGT
Trigger: GGTACCTCTGCTTTCATGCCATGCTGTAATGGAGTG...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAAAGATCAAAGGTATGTaGCAGCATGCCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKKIKGM*QHARRS
Trigger: GGACCTCCTGGCATGCTGCCACATACCTTTGATCTT...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGCTGTATCCAGCTTCTaGAGGTACACCACTACTTTT +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGAVSSF*RYTTTF
Trigger: AAAAGTAGTGGTGTACCTTCAGAAGCTGGATACAGC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRALRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR TCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGACAAGCAGAACAGCATaGTTAGTCAGCTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKTSRTA*LVSSKG
Trigger: CCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGT...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAGTTCTGATGTTTCTATGTGCATTAGGTGTTaGAGATATACAGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: MKAEVPAICNGNQSSDVSMCIRC*RYTGRN
Trigger: ATTTCTCCCTGTATATCTTCAACACCTAATGCACAT...AGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTACACTACTCAAGGAAATaGGAGAGGACACAAACGAAG +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLHYSRK*ERTQTK
Trigger: CTTCGTTTGTGTCCTCTCTCATTTCCTTGAGTAGTG...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCACAGATAATATCATACTaGATGGGCAAAAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSQIISY*MGKSWK
Trigger: CTTCCAGCTTTTGCCCATTCAGTATGATATTATCTG...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp CACAAACGAAGGGAAAAACGTTACATGCTCATGGATAGGAAGAATCAATATCATACTATTCCAAACAATTaGAAAGGAGGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HKRREKRYMLMDRKNQYHTIPNN*KGGTPP
Trigger: GGGAGGAGTCCCTCCTTTTCAATTGTTTGGAATAGT...ATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AACTCTGAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCTTATTGCTCACCTACTaGAGACTAAGCAATACTCCC +
Preference number: 4 (lower is better)
Translates to: NSETQNVKVKFPSMQLVSLLLTY*RLSNTP
Trigger: GGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAA...GGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTCAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR GCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGIAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGACTTGCAAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: TVNSMSNHPLISDRARLASKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...TGCAAGTCTGGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp CCTATTAGAATACTTTTCCTGAGAATTCTTAAGGTGTGCTATGTTGACATACACCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PIRILFLRILKVCYVDIHQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...GTGTATGTCAACATAGCACACCTTAAGAATTCTCAGGAAAAGTATTCTAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKQSLSR*SKWSPC
Trigger: GCAAGGTGACCACTTACTGCAACGAGACAATGACTG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGTTGCAATGTCTTTTCTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ASRQGTSVFFTSKLQCLFFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GAAAAGACATTGCAACTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCCAAATGAGTAGCAGCTaGCACAGGATGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVQMSSS*HRMLGF
Trigger: GAAACCAAGCATCCTGTGGCAGCTGCTACTCATTTG...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKLGVLS*NKVWEA
Trigger: GGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTGGCTGCCACTGCTATaGTCTCAATTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYWLPLL*SQLHTH
Trigger: ATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGAGGAATTGGTGTGGCTaGCACTGCTATGCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKRNWCG*HCYALN
Trigger: ATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCT...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTATTATTCCCCTCCCTGTaGCCATGTGTTCTATTGTTC +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLLFPSL*PCVLLF
Trigger: GAACAATAGAACACATGGGCACAGGGAGGGGAATAA...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTCTGCGCTCTCTCTACTaGATCATCCTTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISLRSLY*IILLPL
Trigger: CAAAGGCAAAAGGATGATGCAGTAGAGAGAGCGCAG...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGISKWSP*CPLLYT
Trigger: GGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS-3UTR GCA 90 bp ATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAGTTCTGATGTTTCTAGATGTGTGGGTCACTaGTGGTTCATTATAAAGTTT +
Preference number: 4 (lower is better)
Translates to: MKAEVPAICNGNQSSDVSRCVGH*WFIIKF
Trigger: AAACTTTATAATGAACCAGCAGTGACCCACACATCT...AGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679032.1
CDS-3UTR GCA 90 bp GGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCTTATTCTCCTGTTACATAATTTTTCAGAGCTCTGACTaGCTTATTCTCCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: GPCLCFRALTALFSCYIIFQSSD*LILLLH
Trigger: ATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAA...AATTATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATAAACACGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGGGATTTTTCGACTGTaGCCACCACTTCTCCTAATC +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKGIFRL*PPLLLI
Trigger: GATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TCTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SPVPRCWQMQNLLLYFSSPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...ACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSETSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGITSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GTTGTAAATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCTCCTGTGTAGTCTCTaGTTGTTCACATTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VVNDGEMARIAKVIICCILLCSL*LFTFQN
Trigger: ATTTTGGAATGTGAACAACCAGAGACTACACAGGAG...GATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATTTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677796.1
ENST00000677877.1
CDS-3UTR CCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTATCTGGCCAGAGGTACTaGAGGTCTATAATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLSGQRY*RSIICR
Trigger: TCTACAGATTATAGACCTCCAGTACCTCTGGCCAGA...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGAATGATGCTCACAGACTaGAATTTACCAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRMMLTD*NLPGNP
Trigger: TGGATTTCCTGGTAAATTCCAGTCTGTGAGCATCAT...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAAGACACATAGACCAGTaGAAGAGAATGAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKARHIDQ*KRMKIS
Trigger: TGAGATCTTCATTCTCTTCCACTGGTCTATGTGTCT...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAGCAGGAAACAAGACCATTATTCGGCAGGAAAGAGCTAGAAGATAGCAATCAGTCAATTTTCTGCATATaGCTAGCCAGATATACAGTA +
Preference number: 4 (lower is better)
Translates to: EQETRPLFGRKELEDSNQSIFCI*LARYTV
Trigger: TACTGTATATCTGGCTAGCCATATGCAGAAAATTGA...CTGATTGCTATCTTCTAGCTCTTTCCTGCCGAATAATGGTCTTGTTTCCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp GAGCAGGAAACAAGACCATTATTCGGCAGGAAAGAGCTAGAAGATAGCAATCAGCATTGTGACATGAGATaGTATCTCATTGTGATTTTG +
Preference number: 4 (lower is better)
Translates to: EQETRPLFGRKELEDSNQHCDMR*YLIVIL
Trigger: CAAAATCACAATGAGATACCATCTCATGTCACAATG...CTGATTGCTATCTTCTAGCTCTTTCCTGCCGAATAATGGTCTTGTTTCCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAAGAACATGTGGTGGTTaGTTTTCTGTTCCTGCATTA +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKARTCGG*FSVPAL
Trigger: TAATGCAGGAACAGAAAACCAACCACCACATGTTCT...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp CTCCCATTCTTCAGGTACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGACTTTTGTGCCACAATaGCAGAGATTTCATACTTTA +
Preference number: 4 (lower is better)
Translates to: LPFFRYLCCLGSFSLFTMTFVPQ*QRFHTL
Trigger: TAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGT...CATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACCTGAAGAATGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR CAA 72 bp AAACCACTTGTAGTCATTCAACACAATCTCAAAGCCTaGGTTGTAAATGATGGTGAAATGGCCAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: KPLVVIQHNLKA*VVNDGEMARIA
Trigger: GGCAATTCTGGCCATTTCACCATCATTTACAACCAAGGCTTTGAGATTGTGTTGAATGACTACAAGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677796.1
ENST00000677877.1
ENST00000678520.1
CDS-3UTR TCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCGCAGTCCAAGACTTCTaGATGGCATTGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVAVQDF*MALIAF
Trigger: GAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGC...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IETSYIVVLRGVITKAVFKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: SQDVGKCKIFCCISAVSGLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...ACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR TCA 90 bp TCTATTGTTCAGCTCCCACTTATAAGTGAGAACATGTGGTGGTTGGTTTTCTGTCTTAAAACTTCAACATaGGCCCATGCAACATTAAAC +
Preference number: 4 (lower is better)
Translates to: SIVQLPLISENMWWLVFCLKTST*AHATLN
Trigger: GTTTAATGTTGCATGGGCTCATGTTGAAGTTTTAAG...ACAGAAAACCAACCACCACATGTTCTCACTTATAAGTGGGAGCTGAACAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCAAGATGGATTTACAGTTaGATTCTACCAGAGGTACAA +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSRWIYS*ILPEVQ
Trigger: TTGTACCTCTGGTAGAATTCAACTGTAAATCCATCT...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACGCCAAGGTCATCATATaGTGTATCCAGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYAKVII*CIQLLK
Trigger: CTTCAGAAGCTGGATACAGCATATGATGACCTTGGC...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKASKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp ACCACTTCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TTSPNHISQGKSLIFHVCFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...ACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGAAGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR GCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKASLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKACYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACGGGAAAAACGTTACATaGTCATGGATAGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNGKNVT*SWIGRI
Trigger: GATTCTTCCTATCCATGAGCATGTAACGTTTTTCCC...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCATCTGTTCATGTTCTTTaGCAACTTTTTAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSSVHVL*QLFNGA
Trigger: AGCCCCATTAAAAAGTTGGCAAAGAACATGAACAGA...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTTCTGACTATAGACACTaGGCTCTCTCTACTGCATCA +
Preference number: 4 (lower is better)
Translates to: DILLDGTVNSMSNHPLISSDYRH*ALSTAS
Trigger: TGATGCAGTAGAGAGAGCGCAGTGTCTATAGTCAGA...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR GCA 90 bp GAGTCACGTTCAAATTGTTGCCCAAGGCCTTTAAAGGGCTGCCTAAAATTTCTACAGGAAGACATTCACTaGAGTATAACACAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: ESRSNCCPRPLKGCLKFLQEDIH*SITQVK
Trigger: TTTAACTTGTGTTATACTGCAGTGAATGTCTTCCTG...TAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATTTGAACGTGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CCA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: HPLISDRARLALRFSDYRPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAACCAGCCCAAAATCTTaGGCGTACTTTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKTSPKS*AYFPAI
Trigger: TATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGT...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGILQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAACTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSELQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTATTTCAGCAGTCAGTaGTGCAGGTTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVYFSSQ*CRFGLF
Trigger: GAAAAGCCCAAACCTGCACCACTGACTGCTGAAATA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678520.1
CDS-3UTR CCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATGCTCTATTTAATAACTaGCAGATGTGTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYALFNN*QMCGSL
Trigger: CAGTGACCCACACATCTGCCAGTTATTAAATAGAGC...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679032.1
CDS-3UTR TCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACTCCACCCAGACAATATaGATTAAACATAACCCCATA +
Preference number: 4 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNSTQTI*IKHNPI
Trigger: TATGGGGTTATGTTTAATTCATATTGTCTGGGTGGA...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACTACAGTAGGATTAATTaGATAGAGAGTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNYSRIN*IESPFP
Trigger: AGGGAAAGGACTCTCTATTCAATTAATCCTACTGTA...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp AATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTAAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: NKEEEQESWVLSVLHNVVSKWSP*CPLLYT
Trigger: AGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACT...TACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR GCA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGAGTCTTCCTTCATTTTaGATGGAGAATCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKSLPSF*MENQCL
Trigger: CAGGCACTGATTCTCCATGCAAAATGAAGGAAGACT...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATGCTATGCTCTCAATTaGACACTCATCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKCYALN*TLISSS
Trigger: AGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp GTTTCTTACATAGATAAACATGTGCCATGGTGGTTTCCTGCACCTATCAACTCAATTGTGATTTTGATATaGACGTCTCTAATGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VSYIDKHVPWWFPAPINSIVILI*TSLMVS
Trigger: ACTGACCATTAGAGACGTGCATATCAAAATCACAAT...TGAGTTGATAGGTGCAGGAAACCACCATGGCACATGTTTATCTATGTAAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGAAAATGGTGTCTGAAATaGAACACTTACCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HPLISDRARLALRFSDYRKWCLK*NTYLEH
Trigger: ATGCTCAAGGTAAGTGTTGCATTTCAGACACCATTT...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAGGGTCTGAGAATTGTTaGTTAGTATACGGATTCTCG +
Preference number: 4 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLGSENC*LVYGFS
Trigger: CGAGAATCCGTATACTAACCAACAATTCTCAGACCC...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CCA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: IYQFPFTTDADHYEILEGFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAATTCCTTCATTTTGCATaGAGAATCAGTGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEFLHFA*RISACV
Trigger: TACACAGGCACTGATTCTCCATGCAAAATGAAGGAA...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACCTACAATTTAGGAATTaGTGTGGCTGCCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYLQFRN*CGCHCY
Trigger: ATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAG...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCATCAATTTTCTGCATATaGCTAGCCAGATATACAGTA +
Preference number: 4 (lower is better)
Translates to: KEMKTCYPITPLQHGMKASIFCI*LARYTV
Trigger: TACTGTATATCTGGCTAGCCATATGCAGAAAATTGA...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CCA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATAGAACATGTGGTGGTTaGTTTTCTGTTCCTGCATTA +
Preference number: 4 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYRTCGG*FSVPAL
Trigger: TAATGCAGGAACAGAAAACCAACCACCACATGTTCT...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR TCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCCTTAGGATTGGGGTCTaGGAATTGTTGGTTAGTATA +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVLRIGV*ELLVSI
Trigger: TATACTAACCAACAATTCTCAGACCCCAATCCTAAG...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: YQFPFTTDADHYEILEGILLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: MASGRLKGILKLRAVLILLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTACTCATAAATGGTGTCTaGAATGCAACACTTACCTTG +
Preference number: 4 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLLINGV*NATLTL
Trigger: CAAGGTAAGTGTTGCATTTCAGACACCATTTATGAG...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR TCA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACGTTTCATATCCACTGTaGAATATCTCTGGGAGATTC +
Preference number: 4 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYVSYPL*NISGRF
Trigger: GAATCTCCCAGAGATATTTCACAGTGGATATGAAAC...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CCA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCCAGTCCCAAGATGTTaGCAAATGCAAAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKPVPRC*QMQNLL
Trigger: CAAAAGATTTTGCATTTGCCAACATCTTGGGACTGG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR TCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACAAAGTCTACAGTCTGTaGATATACCAATTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYKVYSL*IYQFPF
Trigger: AAAGGGGAATTGGTATATTCACAGACTGTAGACTTT...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR TCA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACTATTACTTCATAGCTaGCCATCTTCCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKLLLHS*PSSRKF
Trigger: GAATTTTCTGGAAGATGGTCAGCTATGAAGTAATAG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QISSWKSICKLLRLLLKVFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR GCA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTTCCATGTATGTAGTTaGAGTCCAAGACTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSFHVCS*SPRLLN
Trigger: ATTCAGAAGTCTTGGACTGCAACTACATACATGGAA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR GCA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTAACAGTTTCAATTTTCTaGATATGGCTAGCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLTVSIF*IWLARY
Trigger: ATATCTGGCTAGCCATATGCAGAAAATTGAAACTGT...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR GCA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAATACTGGAGAACAGCATaGCCATTCATTTATACATTG +
Preference number: 4 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKYWRTA*PFIYTL
Trigger: CAATGTATAAATGAATGGGCATGCTGTTCTCCAGTA...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
3UTR CAA 72 bp GCAGAGCTCACTCAATATATAGTAACTATTGACATTTaGCTGGATGGTACAGTAAATTCCATGAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: AELTQYIVTIDI*LDGTVNSMSNH
Trigger: ATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGTTACTATATATTGAGTGAGCTCTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS CCA 90 bp TGCCGAGCCGGCGGCTTACCCATAACCGAGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACCTGGAAGACCCAGGTGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CRAGGLPITEQLTSR*EPLEPTWKTQVPSR
Trigger: CCTGCTGGGCACCTGGGTCTTCCAGGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGGTAAGCCGCCGGCTCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS GCA 90 bp GCAGCAGGAGGGCGGCGAGCAGCAAGGAGGGCCCAGCACCCATGCTaGAGGGAGCTTAAAAATATAATCCTCATAGGCTGGGCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AAGGRRAARRAQHPC*RELKNIILIGWAQR
Trigger: CCGCTGCGCCCAGCCTATGAGGATTATATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGCCCTCCTTGCTGCTCGCCGCCCTCCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677106.1
ENST00000677661.1
CDS-3UTR CAA 90 bp GGGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSVQEGSCLGGRSPGLLCRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...GCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS GCA 90 bp AGGGAGCTGAGAAAAGAGGTGAAGAATTACCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCACCACGAGGCGCGCGCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: RELRKEVKNYQEAER*GLAVSPPRGARLEI
Trigger: TATTTCAAGGCGCGCGCCTCGTGGTGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTGGTAATTCTTCACCTCTTTTCTCAGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524463.6
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CAA 90 bp GGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCACCCATAACCGAGCAGTaGACATCGCGCTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: GRSTLSQAALSLSPNVCSPITEQ*TSRWEP
Trigger: CGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGG...TGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp GAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: EGSCLGGRSPGLLCILHARRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...TGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp AGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTCCCATAACCGAGCAGTaGACATCGCGCTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: SVQEGSCLGGRSPGLLCIPITEQ*TSRWEP
Trigger: CGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGG...AATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp AGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCCCATAACCGAGCAGTaGACATCGCGCTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: RRAAALEVGHQDSFAFCMPITEQ*TSRWEP
Trigger: CGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGG...CATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp CATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCCCAGCCGGTGCCCCGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: HQFLCGSGSSHSHPSRCPVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GGGGCACCGGCTGGGGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CCACAGTCAAGTTGGCTTCATCCCCAGGATGCAAGGCCGGTTCAACATATGCAAAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: PQSSWLHPQDARPVQHMQRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...TTGCATATGTTGAACCGGCCTTGCATCCTGGGGATGAAGCCAACTTGACTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp GGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: GVAATAMLSIAHSSVPLRAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...CCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCGTTGCAGTAAGTGGGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: SGPTHHAPTQSLSRCSKWAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...CCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTCTACCACAGTCAAGTaGGCTTCATCCCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: STLSQAALSLSPNVCSWLSTTVK*ASSPGC
Trigger: GCATCCTGGGGATGAAGCCAACTTGACTGTGGTAGA...CAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS TCA 90 bp TGGTGCAATCTCAGCTCACTCCATGCTCTGTCTCCAGCGTTCAAGTaGTTCTACTGCCTCGGCCTCCCAAGTAACTGGGACTACAGGCGT +
Preference number: 5 (lower is better)
Translates to: WCNLSSLHALSPAFK*FYCLGLPSNWDYRR
Trigger: ACGCCTGTAGTCCCAGTTACTTGGGAGGCCGAGGCAGTAGAATCACTTGAACGCTGGAGACAGAGCATGGAGTGAGCTGAGATTGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS-3UTR CAA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTCAGTCACCCTCCAGTTaGTTCCTCAGATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGQSPSS*FLRCGK
Trigger: TTTGCCACATCTGAGGAACAAACTGGAGGGTGACTG...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393301.5
ENST00000677877.1
CDS-3UTR CAA 90 bp GGAGTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCACTGTTCATGGCCAGTTaGTTCCTCAGATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: GVFRRAAALEVGHQDSFALFMAS*FLRCGK
Trigger: TTTGCCACATCTGAGGAACAAACTGGCCATGAACAG...TGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529974.2
CDS TCA 90 bp CGAGGTTGGGGGAATCACTTGAGGCCAGGTGTTTTGAGGTTACAGTaGGCAATGATCCAGCCACTGAACTCCGGCCTGGATGACAGAATC +
Preference number: 5 (lower is better)
Translates to: RGWGNHLRPGVLRLQ*AMIQPLNSGLDDRI
Trigger: GATTCTGTCATCCAGGCCGGAGTTCAGTGGCTGGATCATTGCTCACTGTAACCTCAAAACACCTGGCCTCAAGTGATTCCCCCAACCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS GCA 90 bp ATTCTGCAGCAGACACCAGCTCAGTGCCCTCCAGTACAACTCCAATaGTACCTACCAGGAGACAGTTTCAGATCCCGTAGGTTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ILQQTPAQCPPVQLQ*YLPGDSFRSRRLRA
Trigger: AGCCCTCAACCTACGGGATCTGAAACTGTCTCCTGGTAGGTAGCATTGGAGTTGTACTGGAGGGCACTGAGCTGGTGTCTGCTGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS-3UTR CAA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAAAGCAACTGCCATGGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: KSNCHGPMMDQLKLHQGFAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...GAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCCATGGCAGTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTGTGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LCHHVVKRSKVCGSMPGGAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...ACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp TGCCACCATGTGGTGAAAAGATCAAAGGTATGTGGCAGCATGCCAGGAGGTCCAGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: CHHVVKRSKVCGSMPGGPVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...TGGACCTCCTGGCATGCTGCCACATACCTTTGATCTTTTCACCACATGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp GGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATAGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: GVLSCNKVWEAAFTALSIAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...TATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: AHDGPTQASSGLHCSLHRAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...TCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATACTGGCTGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: LSCNKVWEAAFTALSILAAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...AGCCAGTATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: CLGGRSPGLLCILHANKDRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp AGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SCLGGRSPGLLCILHANKRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677468.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTGTGAAAAATCAGACCTaGGCAATGACCTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCVKNQT*AMTLSR
Trigger: CCTGCTCAAGGTCATTGCCAAGGTCTGATTTTTCAC...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTGGAGAACCAAACGATaGCAGTTCCCAAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCWRTKR*QFPSLS
Trigger: AGAGAGACTTGGGAACTGCAATCGTTTGGTTCTCCA...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CAA 90 bp ACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGAAACAAGCCCAGGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: TYTFSEAVPTFFPVKQAQAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...CTGGGCTTGTTTCACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp CTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATTCTCACCGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: LNCTLISSSADPEVAILTVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GGTGAGAATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp TTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: LVWLPLLCSQLHTHQFLCVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp ATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: IGVAATAMLSIAHSSVPLAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...CAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTGTGTAGGGGAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: LCRGSKLLPPAQNLGRTFPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTCCCCTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS GCA 90 bp AGTTCCGGCCCAACACATCATGCACCCACCCAGTCATTGTCTCGTTaGAGTAAGTGGTCACCTTGCTGCCCTCTTCTTTATACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SSGPTHHAPTQSLSR*SKWSPCCPLLYTSL
Trigger: CAAACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGGGCCGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS GCA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTaGAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGGTTTCGAAC +
Preference number: 5 (lower is better)
Translates to: EASFFHQPKILGVLS*NKVWEAAFTALVSN
Trigger: GTTCGAAACCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678915.1
CDS GCA 90 bp TTGAGCACAGTCTGCCTAGTGAAGAAACCAGAGGCTCCATCTTGTTaGCTCAAACAGTTCCTGCTCCGAGGCAAGACTGTGAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: LSTVCLVKKPEAPSC*LKQFLLRGKTVKLG
Trigger: GCCTAACTTCACAGTCTTGCCTCGGAGCAGGAACTGTTTGAGGCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGACTGTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS-3UTR CAA 90 bp TTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: FRRAAALEVGHQDSFAFCVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: SAIAHKQNSMISQLKGVEAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTTCAAAGTTGCAATGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: LQSCNVFSLAGSCYSSLWVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACATTGCAACTTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: EASFFHQPKILGVLSCNKAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...CTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: GPTQASSGLHCSLHRNLLPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...TAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAAGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: SAIAHKQNSMISQLKGVEAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGGAGAACATGTGGTGGTaGGTTTTCTGTTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: VQEGSCLGGRSPGLLCILENMWW*VFCSCI
Trigger: AATGCAGGAACAGAAAACCAACCACCACATGTTCTC...CAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGGCCAGAGGTTGCAATTaGTTGAATGTGAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: LLQVGPHCRRLLCLLAPTARGCN*LNVKNQ
Trigger: CTGATTTTTCACATTCAACAAATTGCAACCTCTGGC...CGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTGTTAGTAAGATGGAGTaGATCCTTGCCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: HCRRLLCLLAPTSVHGCGVSKME*ILALMK
Trigger: CTTCATTAGGGCAAGGATCAACTCCATCTTACTAAC...ACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS GCA 90 bp TGGTGGCCATCAACAGCTAGCATGGACAAACTGGTTTCCACCAGCTaGATATCACACCAGCAAATCCAGTTGAGGAAAGGCAACCTCTTC +
Preference number: 5 (lower is better)
Translates to: WWPSTASMDKLVSTS*ISHQQIQLRKGNLF
Trigger: GAAGAGGTTGCCTTTCCTCAACTGGATTTGCTGGTGTGATATGCAGCTGGTGGAAACCAGTTTGTCCATGCTAGCTGTTGATGGCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp GGGTTTCCACTAATTCAGTGGACTGGTGGCCATCAACAGCTAGCATaGACAAACTGGTTTCCACCAGCTGCATATCACACCAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: GFPLIQWTGGHQQLA*TNWFPPAAYHTSKS
Trigger: GGATTTGCTGGTGTGATATGCAGCTGGTGGAAACCAGTTTGTCCATGCTAGCTGTTGATGGCCACCAGTCCACTGAATTAGTGGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS-3UTR CAA 90 bp TGGGTCTTATCAGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: WVLSVLHNVVQELLGRALAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...AAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACTGATAAGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp GGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCACCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: GGSHHILQKQLPWAHDGPPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...TGGTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAATCTTGGGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: KSWAYFPAIRYGKPPSQPHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...AGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GTATGTGGCAGCATGCCAGGAGGTCCAGGAAGCCAAACTTTAAATGGTGCATACCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: VCGSMPGGPGSQTLNGAYHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...GTATGCACCATTTAAAGTTTGGCTTCCTGGACCTCCTGGCATGCTGCCACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLCSQLHTHQFLCGSGSSLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...GCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGAAGGAGGGCAGCTGCCTaGGAGGTAGGTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRRRAAA*EVGHQD
Trigger: GTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCT...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp ACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTCAGATGGATTTACAGTaGAATTCTACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: TGRSTLSQAALSLSPNVCQMDLQ*NSTRGT
Trigger: TGTACCTCTGGTAGAATTCAACTGTAAATCCATCTG...ACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CTAGCTGCTACAGGTAGGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAGAGGTTGCAATTTGTaGAATGTGAAAAATCAGACC +
Preference number: 5 (lower is better)
Translates to: LAATGRSTLSQAALSLSPRGCNL*NVKNQT
Trigger: GGTCTGATTTTTCACATTCAACAAATTGCAACCTCT...GGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACCTACCTGTAGCAGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp GGTCCACACTGTCGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCCATTTATGCCAGAGGTaGCAATTTGTTGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: GPHCRRLLCLLAPTSVHGHLCQR*QFVECE
Trigger: TTCACATTCAACAAATTGCAACCTCTGGCATAAATG...GCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCGACAGTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGTTAGTAAGATGGAGTaGATCCTTGCCCTAATGAAG +
Preference number: 5 (lower is better)
Translates to: QEGSCLGGRSPGLLCILHVSKME*ILALMK
Trigger: CTTCATTAGGGCAAGGATCAACTCCATCTTACTAAC...ATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS TCA 90 bp GGATCACCTGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTaGAACCCCATTTATCTTGTAGAGAGTCCACAGCTTGTAAATAGC +
Preference number: 5 (lower is better)
Translates to: GSPEVRRWRPSWLTR*NPIYLVESPQLVNS
Trigger: GCTATTTACAAGCTGTGGACTCTCTACAAGATAAATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCAGGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678664.1
CDS GCA 90 bp AAATATGTAGGAAGTTCTCCCCACCAGCAAGCAAGCAATCAATTCTaGAGCAGACACCAGCTCAGTGCCCTCCAGTACAACTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: KYVGSSPHQQASNQF*SRHQLSALQYNSNA
Trigger: AGCATTGGAGTTGTACTGGAGGGCACTGAGCTGGTGTCTGCTGCAGAATTGATTGCTTGCTTGCTGGTGGGGAGAACTTCCTACATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp TTAGACACCAGTCTCAAGTCCAGGCCTCCAGAACTTCTGATGGACTaGCTTCAAATTGGGGTTCCCATAACCCCCTCTTTGGGTTCAATT +
Preference number: 5 (lower is better)
Translates to: LDTSLKSRPPELLMD*LQIGVPITPSLGSI
Trigger: AATTGAACCCAAAGAGGGGGTTATGGGAACCCCAATTTGAAGCCAGTCCATCAGAAGTTCTGGAGGCCTGGACTTGAGACTGGTGTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp GCAATAGGAGCTATTCTGATTGATTCCGAAGTGGAATGCCGAGAATaGCAAAGAAGCTGTGTCTCTCCTGGTGAGATGCAGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: AIGAILIDSEVECRE*QRSCVSPGEMQDAE
Trigger: CTCAGCATCCTGCATCTCACCAGGAGAGACACAGCTTCTTTGCCATTCTCGGCATTCCACTTCGGAATCAATCAGAATAGCTCCTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp CCAACACATCATGCACCCACCCAGTCATTGTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTTCTTTATACCAGTTTGTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: PTHHAPTQSLSRCSK*SPCCPLLYTSLFLR
Trigger: TCTGAGGAACAAACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS-3UTR CAA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000679032.1
CDS-3UTR CAA 90 bp GGCGTACTTTCCTGCAATAAGGTATGGGAAGCCGCCTTCACAGCCTTGAGCATAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: GVLSCNKVWEAAFTALSIVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TATGCTCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: SLHRNLLHSGTQRSNNESVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...GCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp GGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCTCGCTTCTAGCATACGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: GLGSENCWLVYGFSLLAYAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...GTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp TTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LVWLPLLCSQLHTHQFLCQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TGTGCTATGTTGACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCGGTGGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: CAMLTYTFSEAVPTFFPVVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...CACCGGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGTCAACATAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTCTACCACAGTCAAGTaGGCTTCATCCCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: CLGGRSPGLLCILHANKDSTTVK*ASSPGC
Trigger: GCATCCTGGGGATGAAGCCAACTTGACTGTGGTAGA...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp GTGTTCAGGAGGGCAGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTCAGATGGATTTACAGTaGAATTCTACCAGAGGTACA +
Preference number: 5 (lower is better)
Translates to: VFRRAAALEVGHQDSFAFQMDLQ*NSTRGT
Trigger: TGTACCTCTGGTAGAATTCAACTGTAAATCCATCTG...AAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCTGCCCTCCTGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CAACACATCATGCACCCACCCAGTCATTGTCTCGTTGCAGTAAGTGGTCACCTTGCCTCTGCTTTCTCTTaGCAAATTACCCCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: QHIMHPPSHCLVAVSGHLASAFS*QITPVA
Trigger: TGCTACAGGGGTAATTTGCAAAGAGAAAGCAGAGGC...AAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATGATGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS-3UTR CAA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTTTTAATCCCAGCACTTaGGAACGCCGAGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: TYVALALSVFLPCLPRVFFNPST*ERRGWG
Trigger: CCCCCAACCTCGGCGTTCCAAAGTGCTGGGATTAAA...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS TCA 90 bp TCGATCACTGTGGGAGGCACAGGCTGCAAGTGCATTCAAGGGCTCTaGATGTGTTCTATTTACAGAGCAATCACAGGAACAAGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SITVGGTGCKCIQGL*MCSIYRAITGTREE
Trigger: TTCTTCCCTTGTTCCTGTGATTGCTCTGTAAATAGAACACATTCAGAGCCCTTGAATGCACTTGCAGCCTGTGCCTCCCACAGTGATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCCCATAACCGAGCAGTaGACATCGCGCTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYPITEQ*TSRWEP
Trigger: CGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000227266.10
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
CDS-3UTR CAA 90 bp GGGCCCATGATGGACCAACTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: GPMMDQLKLHQGFIAASISSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAGTTGGTCCATCATGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: RCWQMQNLLLYFSSQWCRAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...CCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: LQSQDVGKCKIFCCISAVAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...GACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCACCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: ASIETSYIVVLRGVITKAPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...TGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCACTTCAAAGCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: QCCTGASRQGTSVFFTSKPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...CTTTGAAGTGAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp AAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTAGGGGAAGCACACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: KAVFLHFAWRISACVGEAHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...TGCTTCCCCTACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AATTGTTGCCCAAGGCCTTTAAAGGGCTGCCTAAAATTTCTAGCAGTCCTCATAGGTTGGGGGAATCACTaGAGGCCAGGTGTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: NCCPRPLKGCLKFLAVLIGWGNH*RPGVLR
Trigger: CCTCAAAACACCTGGCCTCAAGTGATTCCCCCAACC...TATGAGGACTGCTAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS GCA 90 bp AGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGACACTaGGCTCTCTCTACTGCATCATCCTTTTGCCTTTGCCAACAACAG +
Preference number: 5 (lower is better)
Translates to: SDRARLALRFSDYRH*ALSTASSFCLCQQQ
Trigger: CTGTTGTTGGCAAAGGCAAAAGGATGATGCAGTAGAGAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS GCA 90 bp AAACCTAACAAGGCCTGTCTGTTCAGATTCTTCTTGGTGTCTCTGTaGAGTGTTCCTTCTGCTATGGTATGGGGCAGAATACTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: KPNKACLFRFFLVSL*SVPSAMVWGRILSG
Trigger: ACCAGAGAGTATTCTGCCCCATACCATAGCAGAAGGAACACTGCACAGAGACACCAAGAAGAATCTGAACAGACAGGCCTTGTTAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp GGACATGATCTAAACCTAACAAGGCCTGTCTGTTCAGATTCTTCTTaGTGTCTCTGTGCAGTGTTCCTTCTGCTATGGTATGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: GHDLNLTRPVCSDSS*CLCAVFLLLWYGAE
Trigger: TTCTGCCCCATACCATAGCAGAAGGAACACTGCACAGAGACACCAAGAAGAATCTGAACAGACAGGCCTTGTTAGGTTTAGATCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp GCTTTCTTGGCCCATAGCAGCCATGGAAATAATCTCTCTCAGTACTaGTCATTAAACTCCCATTATCTGACCATCGATCACTGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AFLAHSSHGNNLSQY*SLNSHYLTIDHCGR
Trigger: CCTCCCACAGTGATCGATGGTCAGATAATGGGAGTTTAATGACCAGTACTGAGAGAGATTATTTCCATGGCTGCTATGGGCCAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS-3UTR CAA 90 bp TCTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: SPVPRCWQMQNLLLYFSSVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...ACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp GGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCTTATTCTCCTGTTACATAATTGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: GPCLCFRALTALFSCYIIAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...AATTATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATAAACACGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp GTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGATGGACCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: VEEVIIYFKSNCHGPMMDQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GTCCATCATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CCTCCTGAGGGCTTAGGATTGGGGTCTGAGAATTGTTGGTTAGTATACGGATTCCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: PPEGLGLGSENCWLVYGFQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GAATCCGTATACTAACCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GGAAGGCATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: GRHTLQFRNWCGCHCYALCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...GAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGGAGAACATGTGGTGGTaGGTTTTCTGTTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEENMWW*VFCSCI
Trigger: AATGCAGGAACAGAAAACCAACCACCACATGTTCTC...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp TGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGGCATGATCTTTCACTaGTTGATGAGTAGAGTAATT +
Preference number: 5 (lower is better)
Translates to: WCGCHCYALNCTLISSSAGMIFH*LMSRVI
Trigger: AATTACTCTACTCATCAACAAGTGAAAGATCATGCC...CGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677661.1
CDS TCA 90 bp GATGAAAGGATTTATGTCTACAACGTTCAAAGCCATCAGGTTGGGTaGTGGAGGAATACATGTGAGCTGTGGAGGAATACACGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: DERIYVYNVQSHQVG*WRNTCELWRNTREL
Trigger: CAGCTCACGTGTATTCCTCCACAGCTCACATGTATTCCTCCATCACCCAACCTGATGGCTTTGAACGTTGTAGACATAAATCCTTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 90 bp AAGTTTCTAGCAATAGGAGCTATTCTGATTGATTCCGAAGTGGAATaGCGAGAATGGCAAAGAAGCTGTGTCTCTCCTGGTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: KFLAIGAILIDSEVE*REWQRSCVSPGEMQ
Trigger: CTGCATCTCACCAGGAGAGACACAGCTTCTTTGCCATTCTCGGCATTCCACTTCGGAATCAATCAGAATAGCTCCTATTGCTAGAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS-3UTR CAA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTACCCATAACCGAGCAGTaGACATCGCGCTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLPITEQ*TSRWEP
Trigger: CGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGG...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp TGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: CLGGRSPGLLCILHANKDVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393301.5
ENST00000524463.6
ENST00000528020.2
ENST00000529974.2
ENST00000677106.1
ENST00000677796.1
ENST00000677877.1
ENST00000677976.1
ENST00000679032.1
CDS-3UTR CAA 90 bp ACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCAGACTTGCAGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: TVNSMSNHPLISDRARLAAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...TGCAAGTCTGGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGAGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: HPLISDRARLALRFSDYRVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: SQDVGKCKIFCCISAVSGPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...ACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp AAGGTGTGCTATGTTGACATACACATTCTCAGAGGCAGTTCCCACCTTCTTTCCCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: KVCYVDIHILRGSSHLLSQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GGAAAGAAGGTGGGAACTGCCTCTGAGAATGTGTATGTCAACATAGCACACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTCAAGCTTCATCAGGGCTTCATTGCAGCCTCCATAGAAACCTCCTACATAGTGTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: LKLHQGFIAASIETSYIVCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...CACTATGTAGGAGGTTTCTATGGAGGCTGCAATGAAGCCCTGATGAAGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAATGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: SAIAHKQNSMISQLKGVECKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCAGCTTCAGTCACCCTCCAGTTaGTTCCTCAGATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: NDGEMARIAKVIICCIQLQSPSS*FLRCGK
Trigger: TTTGCCACATCTGAGGAACAAACTGGAGGGTGACTG...AAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CAA 90 bp CGCAGGCTGCTCTGTCTCTTAGCCCCAACGTCTGTTCATGGCTGTGGTTTTAAAATGTCCAGAATGATATaGCCTATATTCTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRLLCLLAPTSVHGCGFKMSRMI*PIFYSR
Trigger: CCTGGAATAGAATATAGGCAATATCATTCTGGACAT...TTTAAAACCACAGCCATGAACAGACGTTGGGGCTAAGAGACAGAGCAGCCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGCCGCCTTCACAGCCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAAAFTA*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGGCTGTGAAGGCGGC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678915.1
CDS-3UTR CAA 90 bp TGTCTTTTCCCTGGCTGGGTCCTGTTACTCATCCCTGTGGTAGTCTCTCAAACTAGAAGAGCAAGAATCTaGGGTCTTATCAGTTCTACA +
Preference number: 5 (lower is better)
Translates to: CLFPGWVLLLIPVVVSQTRRARI*GLISST
Trigger: TGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCT...AGTTTGAGAGACTACCACAGGGATGAGTAACAGGACCCAGCCAGGGAAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTGCCTGCCTAGGGTTTTaGACGCAGAACAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: TYVALALSVFLPCLPRVFACLGF*TQNRKK
Trigger: TTTCTTTCTGTTCTGCGTCAAAAACCCTAGGCAGGC...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CAA 90 bp GGTCCGTGTTTATGTTTCAGAGCTCTGACTGCCTTATTCTCCTGTTACATAATTATGGTCCTTTCCAGCTaGAAAAGGCTGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GPCLCFRALTALFSCYIIMVLSS*KRLWSV
Trigger: CACGGACCACAGCCTTTTCAAGCTGGAAAGGACCAT...AATTATGTAACAGGAGAATAAGGCAGTCAGAGCTCTGAAACATAAACACGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS TCA 90 bp AAAGAGACGAGACCCTTGGTGTCAGATGAAAAACAGAAATGTTGCTaGCTGGCTGTTATAAGACCCACTTGGGGCTCTCAACATTCAGAA +
Preference number: 5 (lower is better)
Translates to: KETRPLVSDEKQKCC*LAVIRPTWGSQHSE
Trigger: TTCTGAATGTTGAGAGCCCCAAGTGGGTCTTATAACAGCCAGTCAGCAACATTTCTGTTTTTCATCTGACACCAAGGGTCTCGTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS TCA 90 bp AGCTGTGCAACACTGGACAACTTACAAATACACCTTGGCGCCTCATaGAAGGAAACCAATGTCAAAGAAATAACACAACCCAGGAGAGTC +
Preference number: 5 (lower is better)
Translates to: SCATLDNLQIHLGAS*KETNVKEITQPRRV
Trigger: GACTCTCCTGGGTTGTGTTATTTCTTTGACATTGGTTTCCTTTCATGAGGCGCCAAGGTGTATTTGTAAGTTGTCCAGTGTTGCACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 90 bp TCTGTTACTTTAGGAAAGCTTCGGAGTCAAGAAGCTAAGCCACCTTaGACAGCTCACAAAGCTGCAAGGCATGATCTTTCACTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SVTLGKLRSQEAKPP*TAHKAARHDLSLVD
Trigger: ATCAACAAGTGAAAGATCATGCCTTGCAGCTTTGTGAGCTGTGCAAGGTGGCTTAGCTTCTTGACTCCGAAGCTTTCCTAAAGTAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677661.1
ENST00000678664.1
ENST00000679297.1
CDS-3UTR CAA 90 bp ATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCAGCTTCGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: MMVKWPELPRSSYAVSSFVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GAAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677796.1
ENST00000677877.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGTTCTACACAATGTTGTACAGGAGCTTCTAGGCAGGGCACTTCAGTCTTTTTCGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: SSTQCCTGASRQGTSVFFVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GAAAAAGACTGAAGTGCCCTGCCTAGAAGCTCCTGTACAACATTGTGTAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: IYQFPFTTDADHYEILEGVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp AAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: KQASSTSPKSWAYFPAIRSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...CCTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AGTGCCATAGCCCACAAGCAGAACAGCATGATTAGTCAGCTCAAAGGGGTTGAATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: SAIAHKQNSMISQLKGVESSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TTCAACCCCTTTGAGCTGACTAATCATGCTGTTCTGCTTGTGGGCTATGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAGCCAAACTTTAAATGGTGCATACTCCTGGAGCCCTACTGCAGTTCAAGGAGGTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: KPNFKWCILLEPYCSSRRSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...CCTCCTTGAACTGCAGTAGGGCTCCAGGAGTATGCACCATTTAAAGTTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATTATTGCTCACCTACTGAAGACTAAGCAATACTCCCAAATACAAGATACACACGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: IIAHLLKTKQYSQIQDTHAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...GTGTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGCCGCCTTCACAGCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: IYQFPFTTDADHYEILEGAAFTA*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGCTGTGAAGGCGGC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp AGTTGCAGTCCAAGACTTCTGAATGGCATTGATAGCTTTCACAAAGTTGTGATCCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: SCSPRLLNGIDSFHKVVIHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...GATCACAACTTTGTGAAAGCTATCAATGCCATTCAGAAGTCTTGGACTGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: IETSYIVVLRGVITKAVFVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LQSQDVGKCKIFCCISAVLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...GACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGGACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGGTTTGCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VGKCKIFCCISAVSGAGLLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...CAAACCTGCACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AATGATGGTGAAATGGCCAGAATTGCCAAGGTCATCATATGCTGTATCCAGCTTCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: NDGEMARIAKVIICCIQLLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...AAGCTGGATACAGCATATGATGACCTTGGCAATTCTGGCCATTTCACCATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676612.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp CTATGCTCTCAATTGCACACTCATCAGTTCCTCTGCGGATCCGGAAGTAGCCATATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: LCSQLHTHQFLCGSGSSHMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...ATGGCTACTTCCGGATCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAAGACTAACTATTCCAAACAATaGAAAAGGAGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALEVGHQDSFAFCMQIKTNYSKQ*KRRDSS
Trigger: GGAGGAGTCCCTCCTTTTCAATTGTTTGGAATAGTT...AGTCTTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp GAAGTGAAGGATCTCTTCAAGGAGAACTACAAACCACTACTCAAGGAAATGAGACTCCCATTCTGTTGGTaGCCTGTTCACTCTGACAGT +
Preference number: 5 (lower is better)
Translates to: EVKDLFKENYKPLLKEMRLPFCW*PVHSDS
Trigger: ACTGTCAGAGTGAACAGGCAACCAACAGAATGGGAG...TCTCATTTCCTTGAGTAGTGGTTTGTAGTTCTCCTTGAAGAGATCCTTCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp AGCTGCCTTGGAGGTAGGTCACCAGGACTCCTTTGCATTTTGCATGCAAATAAATATCTCACTTCCAGTTaGTTCCTCAGATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SCLGGRSPGLLCILHANKYLTSS*FLRCGK
Trigger: TTTGCCACATCTGAGGAACAAACTGGAAGTGAGATA...TTTATTTGCATGCAAAATGCAAAGGAGTCCTGGTGACCTACCTCCAAGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679032.1
CDS-3UTR CAA 90 bp CTTTCCAGCTTGAAAAGGCTGTGGTCCGTGTTTATGTTTCAGAGCTCTGACTGCGAAAATACGTGGGTTTaGCACAAAACTCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: LSSLKRLWSVFMFQSSDCENTWV*HKTLKL
Trigger: GAGTTTCAGAGTTTTGTGCAAAACCCACGTATTTTC...GCAGTCAGAGCTCTGAAACATAAACACGGACCACAGCCTTTTCAAGCTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS TCA 90 bp CAATGGCAAAACACCAAATGTGCTTACACCGTGATTCACAAAAAGTaGTACAATTCCTCATTCAGCCACCAGCTAATTCCCTCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: QWQNTKCAYTVIHKK*YNSSFSHQLIPSVP
Trigger: AGGGACAGAGGGAATTAGCTGGTGGCTGAATGAGGAATTGTATCACTTTTTGTGAATCACGGTGTAAGCACATTTGGTGTTTTGCCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS TCA 90 bp ACAATTCTCACATGCAATACTTATTACATGGGCTTGTGTTTTCCTTaGGTTACGCATCCTTTCAAGCACGGTTTCCCCAGCTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: TILTCNTYYMGLCFP*VTHPFKHGFPSCRK
Trigger: TTTCCTGCAGCTGGGGAAACCGTGCTTGAAAGGATGCGTAACTCAAGGAAAACACAAGCCCATGTAATAAGTATTGCATGTGAGAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 90 bp CTAATTTTATACAGGGATTTCTGGCAAACCTCTCCACCTCTCCTCTaGAAAAGACAATATCTTGATTATGCCGGATTGTCTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LILYRDFWQTSPPLL*KRQYLDYAGLSPGR
Trigger: CCTTCCTGGAGACAATCCGGCATAATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGAGGTTTGCCAGAAATCCCTGTATAAAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS-3UTR CAA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAAACTCAGAATGTTAAGGTGAAATTTCCAAGCATGCAGCTAGTATCCCTGGTGGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: ETQNVKVKFPSMQLVSLVVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...CACCAGGGATACTAGCTGCATGCTTGGAAATTTCACCTTAACATTCTGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: QISSWKSICKLLRLLLKVAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACCCACCCAGTCATaGTCTCGTTGCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKAPTQS*SRCSKW
Trigger: CCACTTACTGCAACGAGACAATGACTGGGTGGGTGC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGTGCAGGTTTGGGCCTaGGGATTTTTCGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKVQVWA*GFFDCG
Trigger: GCCACAGTCGAAAAATCCCAAGGCCCAAACCTGCAC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: IYQFPFTTDADHYEILEGVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ACTATTGACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: TIDILLDGTVNSMSNHPLAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...TAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTCAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAGCTGCCACAGGATGCTaGGTTTCGAACAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKAATGC*VSNRTD
Trigger: GTCAGTCCTGTTCGAAACCAAGCATCCTGTGGCAGC...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CCCAAGATGTTGGCAAATGCAAAATCTTTTGCTGTATTTCAGCAGTCAGTGGTGCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: PKMLANAKSFAVFQQSVVQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...CACCACTGACTGCTGAAATACAGCAAAAGATTTTGCATTTGCCAACATCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp ACTCCTGGAGCCCTACTGCAGTTCAAGGAGGGTAAAAACATCATTATAGTGAATCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TPGALLQFKEGKNIIIVNQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...ATTCACTATAATGATGTTTTTACCCTCCTTGAACTGCAGTAGGGCTCCAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp ATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGAAAGCAGTCTTCCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: IETSYIVVLRGVITKAVFLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...GAAGACTGCTTTCGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCACACTCATCATGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: NLGIGVAATAMLSIAHSSCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...TGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAAGCAAGCTTCTTCCACCAGCCCAAAATCTTGGGCGTACTTTCCTGCAATAAGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: EASFFHQPKILGVLSCNKMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CTTATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTGGAAGAAGCTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGAACTATTCCAAACAATaGAAAAGGAGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: PFLFNIVLGVLARAIRQENYSKQ*KRRDSS
Trigger: GGAGGAGTCCCTCCTTTTCAATTGTTTGGAATAGTT...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp ATTCCCCTCCCTGTGCCCATGTGTTCTATTGTTCAGCTCCCACTTATAAGTGAGTTTCTCATAAAATCTTaGCCCATTCCTATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: IPLPVPMCSIVQLPLISEFLIKS*PIPMSR
Trigger: TCTGGACATAGGAATGGGCAAAGATTTTATGAGAAA...CTCACTTATAAGTGGGAGCTGAACAATAGAACACATGGGCACAGGGAGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp AAAGAGATGAAAACATGCTACCCAATCACTCCATTACAGCATGGCATGAAAGCAGTGAAAAATCAGACCTaGGCAATGACCTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: KEMKTCYPITPLQHGMKAVKNQT*AMTLSR
Trigger: CCTGCTCAAGGTCATTGCCAAGGTCTGATTTTTCAC...TGCTTTCATGCCATGCTGTAATGGAGTGATTGGGTAGCATGTTTTCATCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGAATCATCCTTTTGCCTTaGCCAACAACAGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HPLISDRARLALRFSDYRIILLP*PTTASC
Trigger: GCAGCTGGCTGTTGTTGGCAAAGGCAAAAGGATGAT...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp TTTTGCATGCAAATAAAGACTCCAGAAGGGACTGTAGCTGCTAGAGGCCTTTGCTTCTTGATCAAAGTGTaGAGTCCCCAAGATAACCAA +
Preference number: 5 (lower is better)
Translates to: FCMQIKTPEGTVAARGLCFLIKV*SPQDNQ
Trigger: TTGGTTATCTTGGGGACTCAACACTTTGATCAAGAA...GCAAAGGCCTCTAGCAGCTACAGTCCCTTCTGGAGTCTTTATTTGCATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS-3UTR CAA 90 bp ACCTATGTTGCCTTGGCTCTTTCAGTCTTTTTACCATGCCTGCCTAGGGTTTTTACTTCTTCCTACAATTaGTCTTCTCACGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: TYVALALSVFLPCLPRVFTSSYN*SSHEEP
Trigger: TGGCTCTTCGTGAGAAGACAAATTGTAGGAAGAAGT...AAAAACCCTAGGCAGGCATGGTAAAAAGACTGAAAGAGCCAAGGCAACATAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CAA 90 bp CTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGATAGGGCCGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: LDGTVNSMSNHPLISDRAVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GGCCCTATCACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp GTAGTCATTCAACACAATCTCAAAGCCTTGGTTGTAAATGATGGTGAAATGGCCGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: VVIQHNLKALVVNDGEMAVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GGCCATTTCACCATCATTTACAACCAAGGCTTTGAGATTGTGTTGAATGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677796.1
ENST00000677877.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: DILLDGTVNSMSNHPLISVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACGTCAGTGGTGCAGGTTaGGGCCTTGGGATTTTTCGA +
Preference number: 5 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYVSGAG*GLGIFR
Trigger: TCGAAAAATCCCAAGGCCCAAACCTGCACCACTGAC...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GACATTTTGCTGGATGGTACAGTAAATTCCATGAGCAATCATCCATTAATAAGTCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: DILLDGTVNSMSNHPLISPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...ACTTATTAATGGATGATTGCTCATGGAATTTACTGTACCATCCAGCAAAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACCCTGAGGGCTTAGGATaGGGGTCTGAGAATTGTTGG +
Preference number: 5 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYPEGLG*GSENCW
Trigger: CCAACAATTCTCAGACCCCAATCCTAAGCCCTCAGG...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: MASGRLKGILKLRAVLILHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATTATTGCTCACCTACTGAAGACTAAGCAATACTCCCAAATACAAGATACACACGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: IIAHLLKTKQYSQIQDTHVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GTGTGTATCTTGTATTTGGGAGTATTGCTTAGTCTTCAGTAGGTGAGCAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CATACCCTACAATTTAGGAATTGGTGTGGCTGCCACTGCTATGCTCTCAATTGCATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: HTLQFRNWCGCHCYALNCMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...GCAATTGAGAGCATAGCAGTGGCAGCCACACCAATTCCTAAATTGTAGGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAGCAGGAAACAAGACCATTATTCGGCAGGAAAGAGCTAGAAGATAGCAATCAGGCCAGAGGTTGCAATTaGTTGAATGTGAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: EQETRPLFGRKELEDSNQARGCN*LNVKNQ
Trigger: CTGATTTTTCACATTCAACAAATTGCAACCTCTGGC...CTGATTGCTATCTTCTAGCTCTTTCCTGCCGAATAATGGTCTTGTTTCCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGATACTGCATCATCCTTTaGCCTTTGCCAACAACAGCC +
Preference number: 5 (lower is better)
Translates to: HPLISDRARLALRFSDYRYCIIL*PLPTTA
Trigger: GGCTGTTGTTGGCAAAGGCAAAAGGATGATGCAGTA...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACCACCAGCCCAAAATCTaGGGCGTACTTTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYHQPKI*GVLSLS
Trigger: GCTCAAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678464.1
CDS-3UTR CAA 90 bp AAACCCAAAGGGCTTCCACCTATATTATTTGAGCCTCACGATAATCTCTTTGGGGGTACCTATGTTGCCTaGGCTCTTTCAGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: KPKGLPPILFEPHDNLFGGTYVA*ALSVFL
Trigger: TAAAAAGACTGAAAGAGCCAAGGCAACATAGGTACC...CCCAAAGAGATTATCGTGAGGCTCAAATAATATAGGTGGAAGCCCTTTGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS TCA 90 bp CAGAACTTAATAAAGCAAGTTTCTAGCAATAGGAGCTATTCTGATTaGTTCCGAAGTGGAATGCCGAGAATGGCAAAGAAGCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: QNLIKQVSSNRSYSD*FRSGMPRMAKKLCL
Trigger: GAGACACAGCTTCTTTGCCATTCTCGGCATTCCACTTCGGAATCAATCAGAATAGCTCCTATTGCTAGAAACTTGCTTTATTAAGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS TCA 90 bp CTAATACAAAAGGCTCCAGAGAGAACTCTCATCCCTTCTACCATGTaGAGTTATAGAGAGAAGTCAGCCTGTGAGTCCTATTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: LIQKAPERTLIPSTM*SYREKSACESYFLL
Trigger: TAAAAGGAAATAGGACTCACAGGCTGACTTCTCTCTATAACTTCACATGGTAGAAGGGATGAGAGTTCTCTCTGGAGCCTTTTGTATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS TCA 90 bp CCTTCACAGCCTTGGTTTCGAACAGGACTGACAAAATTGATACCATaGACATTTCTCCAGTCCCAAGATGTTGGCAAATGCAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: PSQPWFRTGLTKLIP*TFLQSQDVGKCKIF
Trigger: AAAGATTTTGCATTTGCCAACATCTTGGGACTGGAGAAATGTTCATGGTATCAATTTTGTCAGTCCTGTTCGAAACCAAGGCTGTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678915.1
CDS GCA 90 bp AATAGCAGTGTCACTATTCAAACCTTGGTCAGTGTCCAGTTCCCATaGTCTGTCAGTATGCCATATACCGAATGCACCCAATTTTTAATT +
Preference number: 5 (lower is better)
Translates to: NSSVTIQTLVSVQFP*SVSMPYTECTQFLI
Trigger: AATTAAAAATTGGGTGCATTCGGTATATGGCATACTGACAGAGCATGGGAACTGGACACTGACCAAGGTTTGAATAGTGACACTGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000677661.1
ENST00000678664.1
ENST00000679297.1
CDS CCA 90 bp GAGGAACTCTCAGATGAGGATATCCTAATTTTATACAGGGATTTCTaGCAAACCTCTCCACCTCTCCTCTGGAAAAGACAATATCTTGAT +
Preference number: 5 (lower is better)
Translates to: EELSDEDILILYRDF*QTSPPLLWKRQYLD
Trigger: ATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGAGGTTTGCCAGAAATCCCTGTATAAAATTAGGATATCCTCATCTGAGAGTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS-3UTR CAA 90 bp GGCAAACCACTTGTAGTCATTCAACACAATCTCAAAGCCTTGGTTGTAAATGATGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: GKPLVVIQHNLKALVVNDVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...ATCATTTACAACCAAGGCTTTGAGATTGTGTTGAATGACTACAAGTGGTTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000676612.1
ENST00000677796.1
ENST00000677877.1
ENST00000678520.1
CDS-3UTR CAA 90 bp AAATGGCCATACTGCCCAAAGCAATTCACAGATTCAATGCTATTCCCATTAAACGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: KWPYCPKQFTDSMLFPLNVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GTTTAATGGGAATAGCATTGAATCTGTGAATTGCTTTGGGCAGTATGGCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACCACCAGCCCAAAATCTaGGGCGTACTTTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: VCEYTNSPLQLMQIIMKYHQPKI*GVLSCN
Trigger: ATTGCAGGAAAGTACGCCCAAGATTTTGGGCTGGTG...GTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: QISSWKSICKLLRLLLKVVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGTCAGCTCAAAGGGGTaGAAAGGGTCTCTTAGACCA +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKVSSKG*KGSLRP
Trigger: TGGTCTAAGAGACCCTTTCAACCCCTTTGAGCTGAC...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAACTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GQWPIERYIKIKGSFNSELLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCACTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKALLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp ATTGCAGCCTCCATAGAAACCTCCTACATAGTGGTACTCAGAGGAGTAATAACGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: IAASIETSYIVVLRGVITMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CGTTATTACTCCTCTGAGTACCACTATGTAGGAGGTTTCTATGGAGGCTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp ATGAAAGCAGAGGTACCTGCGATATGCAATGGGAACCAAAGTTCTGATGTTTCTAGAGTCCTTTCCCTATaGCTTCTTTTTGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: MKAEVPAICNGNQSSDVSRVLSL*LLFVSF
Trigger: AAAGCTGACAAAAAGAAGCAATAGGGAAAGGACTCT...AGAAACATCAGAACTTTGGTTCCCATTGCATATCGCAGGTACCTCTGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACACTCCCATTCTGTTGGTaGCCTGTTCACTCTGACAGT +
Preference number: 5 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTLPFCW*PVHSDS
Trigger: ACTGTCAGAGTGAACAGGCAACCAACAGAATGGGAG...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CCATTCTTATTCAATATAGTATTGGGAGTTCTGGCCAGGGCAATCAGGCAAGAGAGAGGTTGCAATTTGTaGAATGTGAAAAATCAGACC +
Preference number: 5 (lower is better)
Translates to: PFLFNIVLGVLARAIRQERGCNL*NVKNQT
Trigger: GGTCTGATTTTTCACATTCAACAAATTGCAACCTCT...CTCTTGCCTGATTGCCCTGGCCAGAACTCCCAATACTATATTGAATAAGAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp GAGTCACGTTCAAATTGTTGCCCAAGGCCTTTAAAGGGCTGCCTAAAATTTCTAGTGAGCAAACTAAAATaGGAGAAGACTGCCTATTTC +
Preference number: 5 (lower is better)
Translates to: ESRSNCCPRPLKGCLKFLVSKLK*EKTAYF
Trigger: GAAATAGGCAGTCTTCTCCAATTTTAGTTTGCTCAC...TAGAAATTTTAGGCAGCCCTTTAAAGGCCTTGGGCAACAATTTGAACGTGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CAA 90 bp TATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: YTNSPLQLMQIIMKYWKAVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TCTCCTAATCATATCTCCCAGGGTAAGAGTCTCATATTCCATGTATGTAGTTGCTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: SPNHISQGKSLIFHVCSCSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GCAACTACATACATGGAATATGAGACTCTTACCCTGGGAGATATGATTAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
CDS-3UTR CAA 90 bp GTAATAACGAAAGCAGTCTTCCTTCATTTTGCATGGAGAATCAGTGCCTGTGTATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: VITKAVFLHFAWRISACVSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TACACAGGCACTGATTCTCCATGCAAAATGAAGGAAGACTGCTTTCGTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp TCTGAGATTGCTGCTGAAAGTCTACAGTCTGTGAATATACCAATTCCCCTTTACTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: SEIAAESLQSVNIPIPLYSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GTAAAGGGGAATTGGTATATTCACAGACTGTAGACTTTCAGCAGCAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: IYQFPFTTDADHYEILEGQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCTGCTATGCTCTCAATaGCACACTCATCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYLLCSQ*HTHQFL
Trigger: GAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATACTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: TNSPLQLMQIIMKYWKAYCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...GTATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TTTTGTAGTGGAGGAAGTCATCATATACTTCAAAAGCAACTGCCATGGGCCCATATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: FCSGGSHHILQKQLPWAHMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...ATGGGCCCATGGCAGTTGCTTTTGAAGTATATGATGACTTCCTCCACTACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678520.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTTGGGCGTACTTTCCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKLGVLS*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGGAAAGTACGCCCAA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678464.1
CDS-3UTR CAA 90 bp ATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTACCTCAGACTTGTTCTCTaGAGCATACTGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: IRKKSKNLGSYQFYTMLYLRLVL*SILATR
Trigger: TCTTGTAGCCAGTATGCTCAAGAGAACAAGTCTGAG...GTACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CCTATTAGAATACTTTTCCTGAGAATTCTTAAGGTGTGCTATGTTGACATACACGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: PIRILFLRILKVCYVDIHVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...GTGTATGTCAACATAGCACACCTTAAGAATTCTCAGGAAAAGTATTCTAATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676612.1
ENST00000677661.1
ENST00000677802.1
CDS-3UTR CAA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAAGTGAAATGGCCAGAATaGCCAAGGTCATCATATGCT +
Preference number: 5 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKVKWPE*PRSSYA
Trigger: AGCATATGATGACCTTGGCAATTCTGGCCATTTCAC...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CAA 90 bp CATCCATTAATAAGTGATAGGGCCAGACTTGCACTCAGATTTTCTGACTATAGATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: HPLISDRARLALRFSDYRSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TCTATAGTCAGAAAATCTGAGTGCAAGTCTGGCCCTATCACTTATTAATGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAACAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGCAGTCTTCCTTCATTTaGCATGGAGAATCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKQSSFI*HGESVP
Trigger: AGGCACTGATTCTCCATGCAAAATGAAGGAAGACTG...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: MASGRLKGILKLRAVLILCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CATTGTCTATGGCTACTTTTGTGCCACAATGGCAGAGATTTCATACTTTATAAATGTCTATGGCTACTTTaGTGCCACAATGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: HCLWLLLCHNGRDFILYKCLWLL*CHNGRD
Trigger: ATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACA...TTTATAAAGTATGAAATCTCTGCCATTGTGGCACAAAAGTAGCCATAGACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679199.1
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACCTCTTGCCCTCTAAGTaGAGTCTCTATCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYLLPSK*SLYLCK
Trigger: TTTGCACAGATAGAGACTCAACTTAGAGGGCAAGAG...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679224.1
CDS TCA 90 bp CCTAATGAAAGAATAAGGATTCGATCAATGCCATCCAGAACCATATaGTTAGGCAGGGTTCTACCCTCCAACAGCATATATATTAATTCT +
Preference number: 5 (lower is better)
Translates to: PNERIRIRSMPSRTI*LGRVLPSNSIYINS
Trigger: AGAATTAATATATATGCTGTTGGAGGGTAGAACCCTGCCTAATCATATGGTTCTGGATGGCATTGATCGAATCCTTATTCTTTCATTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 90 bp GGGAATACAGGAACAGGTATCAAAGAAAGATTCCAACAAACCACTTaGAGAATGGTACACAATTCTTTGCTTCTACTAGAATCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: GNTGTGIKERFQQTT*RMVHNSLLLLESFL
Trigger: TAGGAAAGATTCTAGTAGAAGCAAAGAATTGTGTACCATTCTGCAAGTGGTTTGTTGGAATCTTTCTTTGATACCTGTTCCTGTATTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS-3UTR CAA 90 bp ATAAGGAAGAAGAGCAAGAATCTTGGGTCTTATCAGTTCTACACAATGTTGTACTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: IRKKSKNLGSYQFYTMLYSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GTACAACATTGTGTAGAACTGATAAGACCCAAGATTCTTGCTCTTCTTCCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678554.1
CDS-3UTR CAA 90 bp ATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: IYQFPFTTDADHYEILEGSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp AATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: NGQWPIERYIKIKGSFNSCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...AGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTACTGTAAGCTTCTGAGATaGCTGCTGAAAGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: ISSWKSICKLLRLLLKVYCKLLR*LLKVYS
Trigger: ACTGTAGACTTTCAGCAGCAATCTCAGAAGCTTACA...GTAGACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATCCTTGCCCTAATGAAGTTTAAAGACCAGAGAGGAATACAAACAGGCAATTATAGAGTCCTTTCCCTATaGCTTCTTTTTGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ILALMKFKDQRGIQTGNYRVLSL*LLFVSF
Trigger: AAAGCTGACAAAAAGAAGCAATAGGGAAAGGACTCT...ATAATTGCCTGTTTGTATTCCTCTCTGGTCTTTAAACTTCATTAGGGCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CAAATATCTTCATGGAAATCTATTTGTAAGCTTCTGAGATTGCTGCTGAAAGTCTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: QISSWKSICKLLRLLLKVSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...GACTTTCAGCAGCAATCTCAGAAGCTTACAAATAGATTTCCATGAAGATATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGTCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: EYTNSPLQLMQIIMKYWKSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...CTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678915.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATCCAGTCCCAAGATGTaGGCAAATGCAAAATCTTTT +
Preference number: 5 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKSSPKM*ANAKSF
Trigger: AAAAGATTTTGCATTTGCCAACATCTTGGGACTGGA...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp TACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAATACTGGAAGGCATAATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: YQFPFTTDADHYEILEGIMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...TATGCCTTCCAGTATTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp GGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGAAATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: GQWPIERYIKIKGSFNSEMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...TTCAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp ATGGCCAGTGGCCGATTGAAAGGTATATTAAAATTAAGGGCAGTTTTAATTCTGATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: MASGRLKGILKLRAVLILMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...CAGAATTAAAACTGCCCTTAATTTTAATATACCTTTCAATCGGCCACTGGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CTCTCAGATCATACAAAGAGTCATCTGAATCAACAGAGTAAGGATGACAAACTAATGTCCAGAATGATATaGCCTATATTCTATTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSDHTKSHLNQQSKDDKLMSRMI*PIFYSR
Trigger: CCTGGAATAGAATATAGGCAATATCATTCTGGACAT...TAGTTTGTCATCCTTACTCTGTTGATTCAGATGACTCTTTGTATGATCTGAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp CACAAACGAAGGGAAAAACGTTACATGCTCATGGATAGGAAGAATCAATATCATTTTCTCATAAAATCTTaGCCCATTCCTATGTCCAGA +
Preference number: 5 (lower is better)
Translates to: HKRREKRYMLMDRKNQYHFLIKS*PIPMSR
Trigger: TCTGGACATAGGAATGGGCAAAGATTTTATGAGAAA...ATGATATTGATTCTTCCTATCCATGAGCATGTAACGTTTTTCCCTTCGTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS-3UTR CAA 90 bp ACAGTCTGTGAATATACCAATTCCCCTTTACAACTGATGCAGATCATTATGAAAATGGCCAGTGGCCGATaGAAAGGTATATTAAAATTA +
Preference number: 5 (lower is better)
Translates to: TVCEYTNSPLQLMQIIMKMASGR*KGILKL
Trigger: TAATTTTAATATACCTTTCAATCGGCCACTGGCCAT...TTTCATAATGATCTGCATCAGTTGTAAAGGGGAATTGGTATATTCACAGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000227266.10
ENST00000676612.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000679224.1
CDS-3UTR CAA 90 bp CTCTACAACCTCACTAGCATGTTGTTTGACTTTTTAATAATCACCATTGTGACACATTTATGCCAGAGGTaGCAATTTGTTGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: LYNLTSMLFDFLIITIVTHLCQR*QFVECE
Trigger: TTCACATTCAACAAATTGCAACCTCTGGCATAAATG...TGTCACAATGGTGATTATTAAAAAGTCAAACAACATGCTAGTGAGGTTGTAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524463.6
ENST00000679032.1
CDS CCA 72 bp AGACCCAGGTGCCCAGCAGGTCAAGATAGGTGCAGTTaGCAGGTGTGTCGCAGCGCACGGCGCCGTCGCCGG +
Preference number: 6 (lower is better)
Translates to: RPRCPAGQDRCS*QVCRSARRRRR
Trigger: CCGGCGACGGCGCCGTGCGCTGCGACACACCTGCCAACTGCACCTATCTTGACCTGCTGGGCACCTGGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000227266.10
ENST00000393301.5
ENST00000524463.6
ENST00000527018.6
ENST00000529974.2
ENST00000533865.6
ENST00000533897.2
ENST00000534131.2
ENST00000676612.1
ENST00000677106.1
ENST00000677208.1
ENST00000677468.1
ENST00000677661.1
ENST00000677796.1
ENST00000677802.1
ENST00000677877.1
ENST00000677976.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678520.1
ENST00000678554.1
ENST00000678915.1
ENST00000679032.1
ENST00000679199.1
CDS CAA 72 bp GACTGCCGAGCCGGCGGCTTACCCATAACCGAGCAGTaGACATCGCGCTGGGAACCGCTGGAGCCCACCTGG +
Preference number: 6 (lower is better)
Translates to: DCRAGGLPITEQ*TSRWEPLEPTW
Trigger: CCAGGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGGTAAGCCGCCGGCTCGGCAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS CCA 72 bp GGCGGCTTACCCATAACCGAGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACCTGGAAGACCCAGGTG +
Preference number: 6 (lower is better)
Translates to: GGLPITEQLTSR*EPLEPTWKTQV
Trigger: CACCTGGGTCTTCCAGGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGGTAAGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677877.1
CDS GCA 72 bp AGAAAAGAGGTGAAGAATTACCAGGAAGCCGAGCGCTaGGGGCTAGCGGTGAGTCCACCACGAGGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: RKEVKNYQEAER*GLAVSPPRGAR
Trigger: GCGCGCGCCTCGTGGTGGACTCACCGCTAGCCCGCAGCGCTCGGCTTCCTGGTAATTCTTCACCTCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524463.6
ENST00000678506.1
ENST00000678915.1
CDS CCA 72 bp TCTTGTGGTCCCATAACCGAGCAGTTGACATCGCGCTaGGAACCGCTGGAGCCCACCTGGAAGACCCAGGTG +
Preference number: 6 (lower is better)
Translates to: SCGPITEQLTSR*EPLEPTWKTQV
Trigger: CACCTGGGTCTTCCAGGTGGGCTCCAGCGGTTCCCAGCGCGATGTCAACTGCTCGGTTATGGGACCACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000227266.10
ENST00000393301.5
ENST00000524463.6
ENST00000527018.6
ENST00000529974.2
ENST00000533865.6
ENST00000533897.2
ENST00000534131.2
ENST00000677106.1
ENST00000677208.1
ENST00000677661.1
ENST00000677802.1
ENST00000677976.1
ENST00000678395.1
ENST00000678464.1
ENST00000678506.1
ENST00000678554.1
ENST00000678915.1
ENST00000679032.1
ENST00000679199.1
CDS GCA 72 bp GGAGGGCGGCGAGCAGCAAGGAGGGCCCAGCACCCATaGTGCAGGGAGCTTAAAAATATAATCCTCATAGGC +
Preference number: 6 (lower is better)
Translates to: GGRRAARRAQHP*CRELKNIILIG
Trigger: GCCTATGAGGATTATATTTTTAAGCTCCCTGCAGCATGGGTGCTGGGCCCTCCTTGCTGCTCGCCGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677106.1
ENST00000677661.1
CDS TCA 72 bp CTCAGCTCACTCCATGCTCTGTCTCCAGCGTTCAAGTaGTTCTACTGCCTCGGCCTCCCAAGTAACTGGGAC +
Preference number: 6 (lower is better)
Translates to: LSSLHALSPAFK*FYCLGLPSNWD
Trigger: GTCCCAGTTACTTGGGAGGCCGAGGCAGTAGAATCACTTGAACGCTGGAGACAGAGCATGGAGTGAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp CAGACACCAGCTCAGTGCCCTCCAGTACAACTCCAATaGTACCTACCAGGAGACAGTTTCAGATCCCGTAGG +
Preference number: 6 (lower is better)
Translates to: QTPAQCPPVQLQ*YLPGDSFRSRR
Trigger: CCTACGGGATCTGAAACTGTCTCCTGGTAGGTAGCATTGGAGTTGTACTGGAGGGCACTGAGCTGGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp GGAAGTTCTCCCCACCAGCAAGCAAGCAATCAATTCTaGAGCAGACACCAGCTCAGTGCCCTCCAGTACAAC +
Preference number: 6 (lower is better)
Translates to: GSSPHQQASNQF*SRHQLSALQYN
Trigger: GTTGTACTGGAGGGCACTGAGCTGGTGTCTGCTGCAGAATTGATTGCTTGCTTGCTGGTGGGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp GTCTGCCTAGTGAAGAAACCAGAGGCTCCATCTTGTTaGCTCAAACAGTTCCTGCTCCGAGGCAAGACTGTG +
Preference number: 6 (lower is better)
Translates to: VCLVKKPEAPSC*LKQFLLRGKTV
Trigger: CACAGTCTTGCCTCGGAGCAGGAACTGTTTGAGGCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS CAA 90 bp CCCAGGAGAGTCTGGAAAAGGTCCCTTTCTGACCACCCAGCTTTCTaGGCCCATAGCAGCCATGGAAATAATCTCTCTCAGTACTGGTCA +
Preference number: 6 (lower is better)
Translates to: PRRVWKRSLSDHPAF*AHSSHGNNLSQYWS
Trigger: TGACCAGTACTGAGAGAGATTATTTCCATGGCTGCTATGGGCCAAGAAAGCTGGGTGGTCAGAAAGGGACCTTTTCCAGACTCTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 72 bp AGCAAGCAATCAATTCTGCAGCAGACACCAGCTCAGTaGCCTCCAGTACAACTCCAATGCTACCTACCAGGA +
Preference number: 6 (lower is better)
Translates to: SKQSILQQTPAQ*PPVQLQCYLPG
Trigger: TCCTGGTAGGTAGCATTGGAGTTGTACTGGAGGGCACTGAGCTGGTGTCTGCTGCAGAATTGATTGCTTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp TGGACTGGTGGCCATCAACAGCTAGCATGGACAAACTaGTTTCCACCAGCTGCATATCACACCAGCAAATCC +
Preference number: 6 (lower is better)
Translates to: WTGGHQQLAWTN*FPPAAYHTSKS
Trigger: GGATTTGCTGGTGTGATATGCAGCTGGTGGAAACCAGTTTGTCCATGCTAGCTGTTGATGGCCACCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp AGTCTCAAGTCCAGGCCTCCAGAACTTCTGATGGACTaGCTTCAAATTGGGGTTCCCATAACCCCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SLKSRPPELLMD*LQIGVPITPSL
Trigger: CAAAGAGGGGGTTATGGGAACCCCAATTTGAAGCCAGTCCATCAGAAGTTCTGGAGGCCTGGACTTGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp CCCAAAATCTTGGGCGTACTTTCCTGCAATAAGGTATaGGAAGCCGCCTTCACAGCCTTGGTTTCGAACAGG +
Preference number: 6 (lower is better)
Translates to: PKILGVLSCNKV*EAAFTALVSNR
Trigger: CCTGTTCGAAACCAAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACGCCCAAGATTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678915.1
CDS CAA 72 bp AGTCTGCCTAGTGAAGAAACCAGAGGCTCCATCTTGTaGCCTCAAACAGTTCCTGCTCCGAGGCAAGACTGT +
Preference number: 6 (lower is better)
Translates to: SLPSEETRGSIL*PQTVPAPRQDC
Trigger: ACAGTCTTGCCTCGGAGCAGGAACTGTTTGAGGCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS CAA 90 bp TTTGAGCACAGTCTGCCTAGTGAAGAAACCAGAGGCTCCATCTTGTaGCCTCAAACAGTTCCTGCTCCGAGGCAAGACTGTGAAGTTAGG +
Preference number: 6 (lower is better)
Translates to: FEHSLPSEETRGSIL*PQTVPAPRQDCEVR
Trigger: CCTAACTTCACAGTCTTGCCTCGGAGCAGGAACTGTTTGAGGCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGACTGTGCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS CAA 90 bp CAGTTTGAGCACAGTCTGCCTAGTGAAGAAACCAGAGGCTCCATCTaGTTGCCTCAAACAGTTCCTGCTCCGAGGCAAGACTGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: QFEHSLPSEETRGSI*LPQTVPAPRQDCEV
Trigger: AACTTCACAGTCTTGCCTCGGAGCAGGAACTGTTTGAGGCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGACTGTGCTCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS TCA 72 bp GAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTaGAACCCCATTTATCTTGTAGAGAGTCCACAGCTT +
Preference number: 6 (lower is better)
Translates to: EVRRWRPSWLTR*NPIYLVESPQL
Trigger: AAGCTGTGGACTCTCTACAAGATAAATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678664.1
CDS CCA 72 bp CTAATTCAGTGGACTGGTGGCCATCAACAGCTAGCATaGACAAACTGGTTTCCACCAGCTGCATATCACACC +
Preference number: 6 (lower is better)
Translates to: LIQWTGGHQQLA*TNWFPPAAYHT
Trigger: GGTGTGATATGCAGCTGGTGGAAACCAGTTTGTCCATGCTAGCTGTTGATGGCCACCAGTCCACTGAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp CATGCACCCACCCAGTCATTGTCTCGTTGCAGTAAGTaGTCACCTTGCTGCCCTCTTCTTTATACCAGTTTG +
Preference number: 6 (lower is better)
Translates to: HAPTQSLSRCSK*SPCCPLLYTSL
Trigger: CAAACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGTGGGTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS CAA 72 bp GTCTGGAAAAGGTCCCTTTCTGACCACCCAGCTTTCTaGGCCCATAGCAGCCATGGAAATAATCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: VWKRSLSDHPAF*AHSSHGNNLSQ
Trigger: CTGAGAGAGATTATTTCCATGGCTGCTATGGGCCAAGAAAGCTGGGTGGTCAGAAAGGGACCTTTTCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 72 bp TCAACAGCTAGCATGGACAAACTGGTTTCCACCAGCTaGATATCACACCAGCAAATCCAGTTGAGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: STASMDKLVSTS*ISHQQIQLRKG
Trigger: GCCTTTCCTCAACTGGATTTGCTGGTGTGATATGCAGCTGGTGGAAACCAGTTTGTCCATGCTAGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp TGCTTTCCTTTCATGCTACCCAGTTTGAGCACAGTCTaGCTAGTGAAGAAACCAGAGGCTCCATCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: CFPFMLPSLSTV*LVKKPEAPSCC
Trigger: GCAACAAGATGGAGCCTCTGGTTTCTTCACTAGGCAGACTGTGCTCAAACTGGGTAGCATGAAAGGAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS GCA 72 bp GCCAGACTTGCACTCAGATTTTCTGACTATAGACACTaGGCTCTCTCTACTGCATCATCCTTTTGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: ARLALRFSDYRH*ALSTASSFCLC
Trigger: GCAAAGGCAAAAGGATGATGCAGTAGAGAGAGCGCAGTGTCTATAGTCAGAAAATCTGAGTGCAAGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527018.6
CDS GCA 72 bp CAGATTCTTCTTGGTGTCTCTGTGCAGTGTTCCTTCTaGTATGGTATGGGGCAGAATACTCTCTGGTATGAG +
Preference number: 6 (lower is better)
Translates to: QILLGVSVQCSF*YGMGQNTLWYE
Trigger: CTCATACCAGAGAGTATTCTGCCCCATACCATAGCAGAAGGAACACTGCACAGAGACACCAAGAAGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp AAGGCCTGTCTGTTCAGATTCTTCTTGGTGTCTCTGTaGAGTGTTCCTTCTGCTATGGTATGGGGCAGAATA +
Preference number: 6 (lower is better)
Translates to: KACLFRFFLVSL*SVPSAMVWGRI
Trigger: TATTCTGCCCCATACCATAGCAGAAGGAACACTGCACAGAGACACCAAGAAGAATCTGAACAGACAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp GCAATAGGAGCTATTCTGATTGATTCCGAAGTGGAATaGCGAGAATGGCAAAGAAGCTGTGTCTCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: AIGAILIDSEVE*REWQRSCVSPG
Trigger: ACCAGGAGAGACACAGCTTCTTTGCCATTCTCGGCATTCCACTTCGGAATCAATCAGAATAGCTCCTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS GCA 72 bp ACCCAGTCATTGTCTCGTTGCAGTAAGTGGTCACCTTaGTGCCCTCTTCTTTATACCAGTTTGTTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: TQSLSRCSKWSP*CPLLYTSLFLR
Trigger: TCTGAGGAACAAACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS GCA 72 bp TTAGGAAAGCTTCGGAGTCAAGAAGCTAAGCCACCTTaGACAGCTCACAAAGCTGCAAGGCATGATCTTTCA +
Preference number: 6 (lower is better)
Translates to: LGKLRSQEAKPP*TAHKAARHDLS
Trigger: TGAAAGATCATGCCTTGCAGCTTTGTGAGCTGTGCAAGGTGGCTTAGCTTCTTGACTCCGAAGCTTTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677661.1
ENST00000678664.1
ENST00000679297.1
CDS CCA 72 bp ACCTGGGTTCCGCCCTCACGCCATCACTCAGGAAGCTaGGTTAATACTTACCATCACATATCGTATTCTAAT +
Preference number: 6 (lower is better)
Translates to: TWVPPSRHHSGS*VNTYHHISYSN
Trigger: ATTAGAATACGATATGTGATGGTAAGTATTAACCCAGCTTCCTGAGTGATGGCGTGAGGGCGGAACCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS TCA 72 bp AAGGCTCCAGAGAGAACTCTCATCCCTTCTACCATGTaGAGTTATAGAGAGAAGTCAGCCTGTGAGTCCTAT +
Preference number: 6 (lower is better)
Translates to: KAPERTLIPSTM*SYREKSACESY
Trigger: ATAGGACTCACAGGCTGACTTCTCTCTATAACTTCACATGGTAGAAGGGATGAGAGTTCTCTCTGGAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS TCA 72 bp CATGGGAGATTGCATGTGACAGGGCAGTGCAAATCCTaGTCTCTTTCTGCCCCAACCTTCAAACTCAAATTT +
Preference number: 6 (lower is better)
Translates to: HGRLHVTGQCKS*SLSAPTFKLKF
Trigger: AAATTTGAGTTTGAAGGTTGGGGCAGAAAGAGATCAGGATTTGCACTGCCCTGTCACATGCAATCTCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS TCA 72 bp AACCTCTCCACCTCTCCTCTGGAAAAGACAATATCTTaGTTATGCCGGATTGTCTCCAGGAAGGAGATGGAA +
Preference number: 6 (lower is better)
Translates to: NLSTSPLEKTIS*LCRIVSRKEME
Trigger: TTCCATCTCCTTCCTGGAGACAATCCGGCATAATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS GCA 72 bp CAGCATAGCTGGGAGAAGAACAAAGAAAGCCCATTCTaGCGTATTTCTAAGCTTCTCTTCCCTCTCATACCT +
Preference number: 6 (lower is better)
Translates to: QHSWEKNKESPF*RISKLLFPLIP
Trigger: AGGTATGAGAGGGAAGAGAAGCTTAGAAATACGGCAGAATGGGCTTTCTTTGTTCTTCTCCCAGCTATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 72 bp CAGTCATTGTCTCGTTGCAGTAAGTGGTCACCTTGCTaGCCTCTTCTTTATACCAGTTTGTTCCTCAGATGT +
Preference number: 6 (lower is better)
Translates to: QSLSRCSKWSPC*PLLYTSLFLRC
Trigger: ACATCTGAGGAACAAACTGGTATAAAGAAGAGGGCAGCAAGGTGACCACTTACTGCAACGAGACAATGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677661.1
ENST00000677802.1
CDS CCA 72 bp TTGGAGCTTAGTTTGTTTTACAGGACTTCCTGTCTCTaGGCAATTTGGTGGAGAGAATGCTACACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: LELSLFYRTSCL*AIWWRECYTEE
Trigger: CTCCTCTGTGTAGCATTCTCTCCACCAAATTGCCCAGAGACAGGAAGTCCTGTAAAACAAACTAAGCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp GTTTCCACCAGCTGCATATCACACCAGCAAATCCAGTaGAGGAAAGGCAACCTCTTCCTCTCTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: VSTSCISHQQIQ*RKGNLFLSISS
Trigger: AGATGAAATAGAGAGGAAGAGGTTGCCTTTCCTCAACTGGATTTGCTGGTGTGATATGCAGCTGGTGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp TCAGAGAGAGAGATTCTGGTTTCTGTAACAAGGGTCTaGGGAGTGAGTTATGAGCCAGGAACCATGGACAAA +
Preference number: 6 (lower is better)
Translates to: SEREILVSVTRV*GVSYEPGTMDK
Trigger: TTTGTCCATGGTTCCTGGCTCATAACTCACTCCCAAGACCCTTGTTACAGAAACCAGAATCTCTCTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp CCACAGCTTGTAAATAGCAGTGTCACTATTCAAACCTaGGTCAGTGTCCAGTTCCCATGCTCTGTCAGTATG +
Preference number: 6 (lower is better)
Translates to: PQLVNSSVTIQT*VSVQFPCSVSM
Trigger: CATACTGACAGAGCATGGGAACTGGACACTGACCAAGGTTTGAATAGTGACACTGCTATTTACAAGCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677661.1
ENST00000678664.1
ENST00000679297.1
CDS CAA 72 bp AAACCTCTCCACCTCTCCTCTGGAAAAGACAATATCTaGATTATGCCGGATTGTCTCCAGGAAGGAGATGGA +
Preference number: 6 (lower is better)
Translates to: KPLHLSSGKDNI*IMPDCLQEGDG
Trigger: TCCATCTCCTTCCTGGAGACAATCCGGCATAATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS TCA 72 bp ACATGCAATACTTATTACATGGGCTTGTGTTTTCCTTaGGTTACGCATCCTTTCAAGCACGGTTTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: TCNTYYMGLCFP*VTHPFKHGFPS
Trigger: GCTGGGGAAACCGTGCTTGAAAGGATGCGTAACTCAAGGAAAACACAAGCCCATGTAATAAGTATTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp GCCCATAGCAGCCATGGAAATAATCTCTCTCAGTACTaGTCATTAAACTCCCATTATCTGACCATCGATCAC +
Preference number: 6 (lower is better)
Translates to: AHSSHGNNLSQY*SLNSHYLTIDH
Trigger: GTGATCGATGGTCAGATAATGGGAGTTTAATGACCAGTACTGAGAGAGATTATTTCCATGGCTGCTATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS CCA 72 bp TACAGGGATTTCTGGCAAACCTCTCCACCTCTCCTCTaGAAAAGACAATATCTTGATTATGCCGGATTGTCT +
Preference number: 6 (lower is better)
Translates to: YRDFWQTSPPLL*KRQYLDYAGLS
Trigger: AGACAATCCGGCATAATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGAGGTTTGCCAGAAATCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS CAA 72 bp CACATGCAATACTTATTACATGGGCTTGTGTTTTCCTaGAGTTACGCATCCTTTCAAGCACGGTTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: HMQYLLHGLVFS*SYASFQARFPQ
Trigger: CTGGGGAAACCGTGCTTGAAAGGATGCGTAACTCAAGGAAAACACAAGCCCATGTAATAAGTATTGCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp ACAGAAATGTTGCTGACTGGCTGTTATAAGACCCACTaGGGGCTCTCAACATTCAGAACACTGCAAGAATTC +
Preference number: 6 (lower is better)
Translates to: TEMLLTGCYKTH*GLSTFRTLQEF
Trigger: GAATTCTTGCAGTGTTCTGAATGTTGAGAGCCCCAAGTGGGTCTTATAACAGCCAGTCAGCAACATTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS CAA 90 bp AACAATTCTCACATGCAATACTTATTACATGGGCTTGTGTTTTCCTaGAGTTACGCATCCTTTCAAGCACGGTTTCCCCAGCTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: NNSHMQYLLHGLVFS*SYASFQARFPQLQE
Trigger: TTCCTGCAGCTGGGGAAACCGTGCTTGAAAGGATGCGTAACTCAAGGAAAACACAAGCCCATGTAATAAGTATTGCATGTGAGAATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 90 bp TCTCCACCTCTCCTCTGGAAAAGACAATATCTTGATTATGCCGGATaGTCTCCAGGAAGGAGATGGAAACATCTCATCTTTGATATCCTG +
Preference number: 6 (lower is better)
Translates to: SPPLLWKRQYLDYAG*SPGRRWKHLIFDIL
Trigger: CAGGATATCAAAGATGAGATGTTTCCATCTCCTTCCTGGAGACAATCCGGCATAATCAAGATATTGTCTTTTCCAGAGGAGAGGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679297.1
CDS CCA 72 bp AGTTTGTTTTACAGGACTTCCTGTCTCTGGGCAATTTaGTGGAGAGAATGCTACACAGAGGAGCTTTATACA +
Preference number: 6 (lower is better)
Translates to: SLFYRTSCLWAI*WRECYTEELYT
Trigger: TGTATAAAGCTCCTCTGTGTAGCATTCTCTCCACCAAATTGCCCAGAGACAGGAAGTCCTGTAAAACAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp CTGGGTTATACAGAACACTGGTATTGGCAAAGTTGGTaGGAATTTTCAAGTAGCCCAATTAGCAGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: LGYTEHWYWQSW*EFSSSPISRKR
Trigger: TCTCTTCCTGCTAATTGGGCTACTTGAAAATTCCCACCAACTTTGCCAATACCAGTGTTCTGTATAACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS CAA 90 bp ATAATGATGAAAGGATTTATGTCTACAACGTTCAAAGCCATCAGGTaGGGTGATGGAGGAATACATGTGAGCTGTGGAGGAATACACGTG +
Preference number: 6 (lower is better)
Translates to: IMMKGFMSTTFKAIR*GDGGIHVSCGGIHV
Trigger: CACGTGTATTCCTCCACAGCTCACATGTATTCCTCCATCACCCAACCTGATGGCTTTGAACGTTGTAGACATAAATCCTTTCATCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS TCA 72 bp AGAATAAGGATTCGATCAATGCCATCCAGAACCATATaGTTAGGCAGGGTTCTACCCTCCAACAGCATATAT +
Preference number: 6 (lower is better)
Translates to: RIRIRSMPSRTI*LGRVLPSNSIY
Trigger: ATATATGCTGTTGGAGGGTAGAACCCTGCCTAATCATATGGTTCTGGATGGCATTGATCGAATCCTTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp ATACGTTTAACCTTCATAGATGAGGGCTCAGACCTGTaGGTGCCTTTAATTACTGAATTAAGGCCAAAGGTA +
Preference number: 6 (lower is better)
Translates to: IRLTFIDEGSDL*VPLITELRPKV
Trigger: TACCTTTGGCCTTAATTCAGTAATTAAAGGCACCCACAGGTCTGAGCCCTCATCTATGAAGGTTAAACGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676529.1
CDS CAA 72 bp TTAGCTGTGCAACACTGGACAACTTACAAATACACCTaGGCGCCTCATGAAAGGAAACCAATGTCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: LAVQHWTTYKYT*APHERKPMSKK
Trigger: TTTCTTTGACATTGGTTTCCTTTCATGAGGCGCCAAGGTGTATTTGTAAGTTGTCCAGTGTTGCACAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS TCA 72 bp ATAAAGCAAGTTTCTAGCAATAGGAGCTATTCTGATTaGTTCCGAAGTGGAATGCCGAGAATGGCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: IKQVSSNRSYSD*FRSGMPRMAKK
Trigger: CTTCTTTGCCATTCTCGGCATTCCACTTCGGAATCAATCAGAATAGCTCCTATTGCTAGAAACTTGCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 90 bp GGGGAATACAGGAACAGGTATCAAAGAAAGATTCCAACAAACCACTaGCAGAATGGTACACAATTCTTTGCTTCTACTAGAATCTTTCCT +
Preference number: 6 (lower is better)
Translates to: GEYRNRYQRKIPTNH*QNGTQFFASTRIFP
Trigger: AGGAAAGATTCTAGTAGAAGCAAAGAATTGTGTACCATTCTGCAAGTGGTTTGTTGGAATCTTTCTTTGATACCTGTTCCTGTATTCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS CAA 72 bp TTCCAACAAACCACTTGCAGAATGGTACACAATTCTTaGCTTCTACTAGAATCTTTCCTACTAGGAGGACAA +
Preference number: 6 (lower is better)
Translates to: FQQTTCRMVHNS*LLLESFLLGGQ
Trigger: TTGTCCTCCTAGTAGGAAAGATTCTAGTAGAAGCAAAGAATTGTGTACCATTCTGCAAGTGGTTTGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS TCA 72 bp AAATATTGTAAACTTGCTTGGACCGCCATAACCTTGTaGCAAACCACAACTCCCATGAGAAATTATAACAAG +
Preference number: 6 (lower is better)
Translates to: KYCKLAWTAITL*QTTTPMRNYNK
Trigger: CTTGTTATAATTTCTCATGGGAGTTGTGGTTTGTCACAAGGTTATGGCGGTCCAAGCAAGTTTACAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS TCA 72 bp AATGCCTCTAAGACTGTTTCCATCTTGCCACAGGCCTaGTTACTCCTTATTAGTTTACATAAGGTTATTTCA +
Preference number: 6 (lower is better)
Translates to: NASKTVSILPQA*LLLISLHKVIS
Trigger: TGAAATAACCTTATGTAAACTAATAAGGAGTAATCAGGCCTGTGGCAAGATGGAAACAGTCTTAGAGGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp AATAAAGTGGCAAAATTATACCAACTACTACTACTCTaGGGAAGAGTGGTGTCAATTCCGGTCATCTTCTTA +
Preference number: 6 (lower is better)
Translates to: NKVAKLYQLLLL*GRVVSIPVIFL
Trigger: TAAGAAGATGACCGGAATTGACACCACTCTTCCCAAGAGTAGTAGTAGTTGGTATAATTTTGCCACTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CAA 72 bp AGGAACAGGTATCAAAGAAAGATTCCAACAAACCACTaGCAGAATGGTACACAATTCTTTGCTTCTACTAGA +
Preference number: 6 (lower is better)
Translates to: RNRYQRKIPTNH*QNGTQFFASTR
Trigger: TCTAGTAGAAGCAAAGAATTGTGTACCATTCTGCAAGTGGTTTGTTGGAATCTTTCTTTGATACCTGTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS CAA 72 bp CAGCTCACAAAGCTGCAAGGCATGATCTTTCACTTGTaGATGAGTAGAGTAATTTTTAACATCCTTGTTTTG +
Preference number: 6 (lower is better)
Translates to: QLTKLQGMIFHL*MSRVIFNILVL
Trigger: CAAAACAAGGATGTTAAAAATTACTCTACTCATCAACAAGTGAAAGATCATGCCTTGCAGCTTTGTGAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000677661.1
ENST00000678664.1
ENST00000679297.1
CDS CAA 90 bp AAAGAAAGATTCCAACAAACCACTTGCAGAATGGTACACAATTCTTaGCTTCTACTAGAATCTTTCCTACTAGGAGGACAAATGAGTTTG +
Preference number: 6 (lower is better)
Translates to: KERFQQTTCRMVHNS*LLLESFLLGGQMSL
Trigger: CAAACTCATTTGTCCTCCTAGTAGGAAAGATTCTAGTAGAAGCAAAGAATTGTGTACCATTCTGCAAGTGGTTTGTTGGAATCTTTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533897.2
ENST00000678065.1
CDS TCA 72 bp AAATCTGTTCTTCTTGGGCTTTTATGGAGCGTTCATTaGATACACATGATTAAAGCATGGATAACCATGTTA +
Preference number: 6 (lower is better)
Translates to: KSVLLGLLWSVH*IHMIKAWITML
Trigger: TAACATGGTTATCCATGCTTTAATCATGTGTATTCAATGAACGCTCCATAAAAGCCCAAGAAGAACAGATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS TCA 72 bp CATTATTTTCTCAAGTACCTGACAAGATACTGTAGATaGGGGATCAATTCAAAGCAATTAATCCATCAAAGC +
Preference number: 6 (lower is better)
Translates to: HYFLKYLTRYCR*GINSKQLIHQS
Trigger: GCTTTGATGGATTAATTGCTTTGAATTGATCCCTCATCTACAGTATCTTGTCAGGTACTTGAGAAAATAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS TCA 72 bp TTAATTTCAATTTGCTCTCTGACTACAGAAAAGCTGTaGATTCCCTTAATTGCAGCTAATTCTGAATTCTGG +
Preference number: 6 (lower is better)
Translates to: LISICSLTTEKL*IPLIAANSEFW
Trigger: CCAGAATTCAGAATTAGCTGCAATTAAGGGAATTCACAGCTTTTCTGTAGTCAGAGAGCAAATTGAAATTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS GCA 72 bp AAATTATGTACAAGGTTTATGGTACATGGTAACAATTaGCTTGAATATCTCTTCCTTTGCACATGCATTCCA +
Preference number: 6 (lower is better)
Translates to: KLCTRFMVHGNN*LEYLFLCTCIP
Trigger: TGGAATGCATGTGCAAAGGAAGAGATATTCAAGGCAATTGTTACCATGTACCATAAACCTTGTACATAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533865.6
CDS CCA 72 bp CTATTTGGTGATAGCATAACTTGCAATCTCTTAACATaGACCCTTCAATTTCACTTTCCATTCATTTCTCAA +
Preference number: 6 (lower is better)
Translates to: LFGDSITCNLLT*TLQFHFPFISQ
Trigger: TTGAGAAATGAATGGAAAGTGAAATTGAAGGGTCCATGTTAAGAGATTGCAAGTTATGCTATCACCAAATAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS CCA 72 bp TTTCTACAATCTCAAATAGATAGTGTGATCTTCATATaGTATAACTATGTTCAGCAGCACCTTCTAACAGTG +
Preference number: 6 (lower is better)
Translates to: FLQSQIDSVIFI*YNYVQQHLLTV
Trigger: CACTGTTAGAAGGTGCTGCTGAACATAGTTATACCATATGAAGATCACACTATCTATTTGAGATTGTAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533897.2
CDS CAA 72 bp CCCCTCATAATTTCTGAGAAGCTTTTGGCAATATTCTaGATAATGATGAAAGGATTTATGTCTACAACGTTC +
Preference number: 6 (lower is better)
Translates to: PLIISEKLLAIF*IMMKGFMSTTF
Trigger: GAACGTTGTAGACATAAATCCTTTCATCATTATCAAGAATATTGCCAAAAGCTTCTCAGAAATTATGAGGGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533897.2