Pregenerated sensors for CTDSPL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000137770Ensembl transcript IDs: ENST00000260327.9, ENST00000558373.5, ENST00000558966.5, ENST00000558968.1, ENST00000559175.1, ENST00000559793.5, ENST00000560620.1, ENST00000561189.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTTGGTTTTTATTATTGAAGTGCCCACAGGCACAAGAGTATAGGTaGTTACATTTCCCTTTAGATTATGGGAAAGCCCTTTTGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SWFLLLKCPQAQEYR*LHFPLDYGKALLRM Trigger: CATTCTCAAAAGGGCTTTCCCATAATCTAAAGGGAAATGTAAGCACCTATACTCTTGTGCCTGTGGGCACTTCAATAATAAAAACCAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR CCA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGAACCCAGGATCCTCCTaGCTCCCAGTCCTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRNPGSS*LPVLGS Trigger: AGAGCCAAGGACTGGGAGCCAGGAGGATCCTGGGTT...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| 3UTR-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATT | + |
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Preference number: 2 (lower is better) Translates to: HATIKISTSCGSCIREPREHSEV*GIPLSI Trigger: AATGGATAAAGGTATACCTCAGACTTCACTGTGCTC...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR TCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGAGAGATCTGGTCCTTATaGAGAATTCTGTGCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LYPQNSCLWASNFNSRYREIWSL*RILCSQ Trigger: CTGCGAGCACAGAATTCTTCATAAGGACCAGATCTC...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGAACAAATATACAATGTaGAGGCAGACAAAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HATIKISTSCGSCIREPRNKYTM*RQTKQE Trigger: TTCCTGCTTTGTCTGCCTGCACATTGTATATTTGTT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR TCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATCTTCATTGATGAGATaGAGTCTCTGTTTTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LYPQNSCLWASNFNSRYRSSLMR*SLCFSG Trigger: GCCTGAAAAACAGAGACTTCATCTCATCAATGAAGA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR CCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATCTTTACTAGTTGCTTaGCATAGTTATTCGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LYPQNSCLWASNFNSRYRSLLVA*HSYSVG Trigger: ACCCACCGAATAACTATGCCAAGCAACTAGTAAAGA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAATCAAGCCAAACAGGTaGCCAAACTTTCTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HAESSDLLSFGFRCLSIKIKPNR*PNFLLK Trigger: TTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGAT...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAAACAAATATACAATGTaGAGGCAGACAAAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VCHCKILPFENIRHHNGLNKYTM*RQTKQE Trigger: TTCCTGCTTTGTCTGCCTGCACATTGTATATTTGTT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR GCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGAAAATCTGTGTGCCATTaGAAGATATTACCATTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LYPQNSCLWASNFNSRYRKSVCH*KILPFE Trigger: CTCAAATGGTAATATCTTGCAATGGCACACAGATTT...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR GCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATCCATTAAATCTGTGTaGCATTGCAAGATATTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LYPQNSCLWASNFNSRYRSIKSV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACAGATTTAATGGA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAACTAGGTTCACAATTTTaGGCAAGAGCATATGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: HAESSDLLSFGFRCLSIKLGSQF*ARAYVK Trigger: CTTTACATATGCTCTTGCTCAAAATTGTGAACCTAG...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAATCCATTAAATCTGTGTaGCATTGCAAGATATTACCA | + |
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Preference number: 2 (lower is better) Translates to: HAESSDLLSFGFRCLSIKSIKSV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACAGATTTAATGGA...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR CAA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGCCTGGCTCCCAGTCCTaGGCTCTAACCAGTGGACCA | + |
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Preference number: 3 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRPGSQS*ALTSGP Trigger: TGGTCCACTGGTTAGAGCCAAGGACTGGGAGCCAGG...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| 3UTR CCA 72 bp | GTCAGCGAGGTCCTGCTTTTTAACCAATTTTCCAGATaGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGC | + |
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Preference number: 3 (lower is better) Translates to: VSEVLLFNQFSR*LTEEQGGQVTC Trigger: GCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTGGTTAAAAAGCAGGACCTCGCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| 3UTR TCA 72 bp | GTGATTGACACAGACATGGAAGAGATCTGGTCCTTATaGAGAATTCTGTGCTCGCAGGAAAGATCTGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: VIDTDMEEIWSL*RILCSQERSVG Trigger: TCCTACAGATCTTTCCTGCGAGCACAGAATTCTTCATAAGGACCAGATCTCTTCCATGTCTGTGTCAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR CCA 72 bp | ATAAGAAAGTCAATGAATGACAACCCTAAGGCCTTTTaGCCCATACATTTTTGTTCCCAGTCCACTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: IRKSMNDNPKAF*PIHFCSQSTLP Trigger: GGGAAGAGTGGACTGGGAACAAAAATGTATGGGCCAAAAGGCCTTAGGGTTGTCATTCATTGACTTTCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR GCA 72 bp | TTATTATTGAAGTGCCCACAGGCACAAGAGTATAGGTaGTTACATTTCCCTTTAGATTATGGGAAAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LLLKCPQAQEYR*LHFPLDYGKAL Trigger: AAGGGCTTTCCCATAATCTAAAGGGAAATGTAAGCACCTATACTCTTGTGCCTGTGGGCACTTCAATAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR-3UTR CAA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATTCCACAAAACAGGCTaGCTCTACATGCTAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: LYPQNSCLWASNFNSRYRFHKTG*LYMLDF Trigger: AAAATCTAGCATGTAGAGCAAGCCTGTTTTGTGGAA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR-3UTR CAA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGAAGTTGGTTTTTATTATaGAAGTGCCCACAGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: LYPQNSCLWASNFNSRYRSWFLL*KCPQAQ Trigger: TTGTGCCTGTGGGCACTTCAATAATAAAAACCAACT...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR GCA 72 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTaGATTAGAGAACCAAGGCTTGAAGACTATTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: HATIKISTSCGS*IREPRLEDYFH Trigger: ATGAAAATAGTCTTCAAGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| 3UTR GCA 72 bp | AAAAGATCTCAAATCATGTTATATCCCCAGAACTCTTaGCTCTGGGCAAGTAATTTCAATTCAAGATACAGA | + |
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Preference number: 3 (lower is better) Translates to: KRSQIMLYPQNS*LWASNFNSRYR Trigger: TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAACATGATTTGAGATCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| 3UTR CAA 72 bp | CCAAGGTCACACAGTAAGTCAGTGGTTAGCCCCGCATaGGAACCCAGGATCCTCCTGGCTCCCAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PRSHSKSVVSPA*EPRILLAPSPW Trigger: CCAAGGACTGGGAGCCAGGAGGATCCTGGGTTCCAATGCGGGGCTAACCACTGACTTACTGTGTGACCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| CDS-3UTR CCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCTCAGGCTCCGGCGATaGTCCCGACTGCGCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRLRLRR*SRLRNV Trigger: CACATTGCGCAGTCGGGACCATCGCCGGAGCCTGAG...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR TCA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGAACAAGGAGGTCAAGTaGCTTGCCCAAGGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRNKEVK*LAQGHT Trigger: TGTGTGACCTTGGGCAAGTCACTTGACCTCCTTGTT...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| CDS-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGGTTTCCTGTGTGAGCTaGAGGGGCTGGGCACATTTC | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRVSCVS*RGWAHF Trigger: GAAATGTGCCCAGCCCCTTCAGCTCACACAGGAAAC...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTCCCACAACAACCCTGTaGGGTAGGGTGATCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSPTTTL*GRVIRA Trigger: TGCCCTGATCACCCTACCTCACAGGGTTGTTGTGGG...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR TCA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGTTCCAGATGGTTGACTaGGGAACAAGGAGGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRFQMVD*GTRRSS Trigger: ACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAA...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGGGCGATGGTCCCGACTaGGCAATGTGTGGTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRGDGPD*AMCGVF Trigger: AAAGACACCACACATTGCGCAGTCGGGACCATCGCC...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTGTTTCCTGTGTGAGCTaGAGGGGCTGGGCACATTTC | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSVSCVS*RGWAHF Trigger: GAAATGTGCCCAGCCCCTTCAGCTCACACAGGAAAC...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTCGACTGCGCAATGTGTaGTGTCTTTCCCGCTTACCC | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSRLRNV*CLSRLP Trigger: GGGTAAGCGGGAAAGACACCACACATTGCGCAGTCG...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR CCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGACTGCATTGGTGGCTTaGGAGTGTACTGTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRTALVA*ECTVPQ Trigger: CTGTGGCACAGTACACTCCCAAGCCACCAATGCAGT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTCACGGAAAAGCCGGTaGCTGACCAGTTGCTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRSRKSR*LTSCFL Trigger: TAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTGGGGGCAGCAAATCATaGAAGCGAAATCTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSGGSKS*KRNLSL Trigger: CAGAGACAGATTTCGCTTGCATGATTTGCTGCCCCC...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGTTGTCAGCGAGGTCCTaGTTTTTAACCAATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRLSARS*FLTNFP Trigger: TGGAAAATTGGTTAAAAAGCAGGACCTCGCTGACAA...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000560620.1 |
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| CDS-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGAGCGAAATCTGTCTCTaGTGTGTGGTCGAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRSEICL*CVVEHL Trigger: AAGATGTTCGACCACACATCAGAGACAGATTTCGCT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTATCTGGAGTTACTGGTaGTGTAAGGGGTGGGATATC | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSIWSYW*CKGWDI Trigger: GATATCCCACCCCTTACAGCACCAGTAACTCCAGAT...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGACCTCTTGTGGTAGCTaGATTAGAGAACCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRTSCGS*IREPRL Trigger: AAGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTGTTTGGATTTGATTTaGCTGCTGAGAAGCTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRCLDLI*LLRSFP Trigger: CGGAAAGCTTCTCAGCAGTCAAATCAAATCCAAACA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGATGGGAAAGCCCTTTTaGGAATGCACTAAATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRMGKPF*ECTKSG Trigger: TCCTGATTTAGTGCATTCTCAAAAGGGCTTTCCCAT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGGTTGGTTTTTATTATTaGAGTGCCCACAGGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRVGFYY*SAHRHK Trigger: CTTGTGCCTGTGGGCACTTCAATAATAAAAACCAAC...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATCACGGAAAAGCCGGTaGCTGACCAGTTGCTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRSRKSR*LTSCFL Trigger: TAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTGTTTGGATTTGATTTaGCTGCTGAGAAGCTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSCLDLI*LLRSFP Trigger: CGGAAAGCTTCTCAGCAGTCAAATCAAATCCAAACA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATT | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSEHSEV*GIPLSI Trigger: AATGGATAAAGGTATACCTCAGACTTCACTGTGCTC...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTATCAAGCCAAACAGGTaGCCAAACTTTCTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSIKPNR*PNFLLK Trigger: TTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGAT...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR GCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTACTTGGGAGTGTACTGTaGCACAGGATTATGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLLGSVL*HRIMHS Trigger: GCTATGCATAATCCTGTGGCACAGTACACTCCCAAG...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTCTTTGTACTTAATCTaGGGGCAGCAAATCATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRSLYLI*GQQIMQ Trigger: TTGCATGATTTGCTGCCCCCAGATTAAGTACAAAGA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAAGCGAAATCTGTCTCTaGTGTGTGGTCGAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLSEICL*CVVEHL Trigger: AAGATGTTCGACCACACATCAGAGACAGATTTCGCT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGAATCAAGCCAAACAGGTaGCCAAACTTTCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRIKPNR*PNFLLK Trigger: TTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGAT...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR TCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTTATGCTTGATCAGCTaGCTTAAAGGAACTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSLCLIS*LKGTLL Trigger: TAGGAGAGTTCCTTTAAGTCAGCTGATCAAGCATAA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAGAGATCTGGTCCTTATaGAGAATTCTGTGCTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKEIWSL*RILCSQ Trigger: CTGCGAGCACAGAATTCTTCATAAGGACCAGATCTC...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTTTCAGCAATCAGAATaGATGCTGAAAGTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRFQQSE*MLKVQI Trigger: GATCTGAACTTTCAGCATGCATTCTGATTGCTGAAA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGGCACAAGAGTATAGGTaGTTACATTTCCCTTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRAQEYR*LHFPLD Trigger: ATCTAAAGGGAAATGTAAGCACCTATACTCTTGTGC...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTATATCCCCAGAACTCTTaGCTCTGGGCAAGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLYPQNS*LWASNF Trigger: GAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATA...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR CCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTCTTTACTAGTTGCTTaGCATAGTTATTCGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSSLLVA*HSYSVG Trigger: ACCCACCGAATAACTATGCCAAGCAACTAGTAAAGA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR CCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGACTATCTGGAGTTACTaGTGCATTTTTATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRTIWSY*CIFICW Trigger: CCAGCAAATAAAAATGCACCAGTAACTCCAGATAGT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAGCTTCTCCATTTACTTaGCTTTTCCGTCTTACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLASPFT*LFRLTR Trigger: TCGAGTAAGACGGAAAAGTCAAGTAAATGGAGAAGC...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLEHSEV*GIPLSI Trigger: AATGGATAAAGGTATACCTCAGACTTCACTGTGCTC...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAATGGGAAAGCCCTTTTaGGAATGCACTAAATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLMGKPF*ECTKSG Trigger: TCCTGATTTAGTGCATTCTCAAAAGGGCTTTCCCAT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAACTCAGGGGAAGACATaGGAAGTAATGACATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKTQGKT*EVMTSA Trigger: TGCTGATGTCATTACTTCTCATGTCTTCCCCTGAGT...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGAAATCTGTGTGCCATTaGAAGATATTACCATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRKSVCH*KILPFE Trigger: CTCAAATGGTAATATCTTGCAATGGCACACAGATTT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTCCATTAAATCTGTGTaGCATTGCAAGATATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRSIKSV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACAGATTTAATGGA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR GCA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTTTTTATTATTGAAGTaGCCACAGGCACAAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HATIKISTSCGSCIREPRFLLLK*PQAQEY Trigger: ATACTCTTGTGCCTGTGGGCACTTCAATAATAAAAA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| 3UTR CAA 72 bp | CCTACTCTCAAACCAGTGTCACATTTAGCTAAAACATaGATTACCCAATACTGGCTATTAGAATCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLKPVSHLAKT*ITQYWLLESPG Trigger: TCCTGGTGATTCTAATAGCCAGTATTGGGTAATCAATGTTTTAGCTAAATGTGACACTGGTTTGAGAGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAGTTGGTTTTTATTATTaGAGTGCCCACAGGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKVGFYY*SAHRHK Trigger: CTTGTGCCTGTGGGCACTTCAATAATAAAAACCAAC...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGACAAAGAGATGTCTGGTaGACTTTAATTTTGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRQRDVW*TLILLP Trigger: AGGCAACAAAATTAAAGTTCACCAGACATCTCTTTG...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR TCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATTCCTCCATGTATCTTaGATAAGCTCTGTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRFLHVS*ISSVKS Trigger: AGATTTCACAGAGCTTATTCAAGATACATGGAGGAA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR GCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTCCATTAAATCTGTGTaGCATTGCAAGATATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSSIKSV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACAGATTTAATGGA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTTTCCCTTTAGATTATaGGAAAGCCCTTTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSQTGDQTFSSKICEHSFPFRL*ESPFEN Trigger: ATTCTCAAAAGGGCTTTCCCATAATCTAAAGGGAAA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTACTAGGTTCACAATTTTaGGCAAGAGCATATGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLLGSQF*ARAYVK Trigger: CTTTACATATGCTCTTGCTCAAAATTGTGAACCTAG...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAATTATGCTTGATCAGCTaGCTTAAAGGAACTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKLCLIS*LKGTLL Trigger: TAGGAGAGTTCCTTTAAGTCAGCTGATCAAGCATAA...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTATTAGCTTTATGTGATTaGCACAGACATGGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLLALCD*HRHGRD Trigger: ATCTCTTCCATGTCTGTGTCAATCACATAAAGCTAA...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAGCACAAGAGTATAGGTaGTTACATTTCCCTTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLAQEYR*LHFPLD Trigger: ATCTAAAGGGAAATGTAAGCACCTATACTCTTGTGC...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAATCTTTGTACTTAATCTaGGGGCAGCAAATCATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKSLYLI*GQQIMQ Trigger: TTGCATGATTTGCTGCCCCCAGATTAAGTACAAAGA...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGATTTCCCTTTAGATTATaGGAAAGCCCTTTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRFPFRL*ESPFEN Trigger: ATTCTCAAAAGGGCTTTCCCATAATCTAAAGGGAAA...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR CCA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGAAAGGTAGAAGGAAGCTaGATAAATTGTCTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYPQNSCLWASNFNSRYRKVEGS*INCLCK Trigger: TTTACAGAGACAATTTATCCAGCTTCCTTCTACCTT...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR GCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAATTTCAGCAATCAGAATaGATGCTGAAAGTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKFQQSE*MLKVQI Trigger: GATCTGAACTTTCAGCATGCATTCTGATTGCTGAAA...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTATTTTTATTATTGAAGTaGCCACAGGCACAAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLFLLLK*PQAQEY Trigger: ATACTCTTGTGCCTGTGGGCACTTCAATAATAAAAA...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAAGATCTTTTAAGTTTTaGGTTTCGCTGTTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCHCKILPFENIRHHNGLRSFKF*VSLFEH Trigger: ATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAAGATCTTTTAAGTTTTaGGTTTCGCTGTTTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKRSFKF*VSLFEH Trigger: ATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCT...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAAAGGTAGAAGGAAGCTaGATAAATTGTCTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HAESSDLLSFGFRCLSIKKVEGS*INCLCK Trigger: TTTACAGAGACAATTTATCCAGCTTCCTTCTACCTT...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
||
| CDS CCA 90 bp | TACGAGGCGCCAAAGAGTGCATGCCTACCAAGGCGCCAGAGCCGCTaGAGGACCAGGTTTAGAAGGGGAGGAGATCCCGGCAGACGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YEAPKSACLPRRQSR*RTRFRRGGDPGRRP Trigger: GGGCCGTCTGCCGGGATCTCCTCCCCTTCTAAACCTGGTCCTCCAGCGGCTCTGGCGCCTTGGTAGGCATGCACTCTTTGGCGCCTCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
||
| CDS GCA 90 bp | AGGAGCGGCTCCGCACAGTGGACGTACGAGGCGCCAAAGAGTGCATaGCTACCAAGGCGCCAGAGCCGCTGGAGGACCAGGTTTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGSAQWTYEAPKSA*LPRRQSRWRTRFRR Trigger: CCTTCTAAACCTGGTCCTCCAGCGGCTCTGGCGCCTTGGTAGGCATGCACTCTTTGGCGCCTCGTACGTCCACTGTGCGGAGCCGCTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
||
| CDS CCA 90 bp | TTTCTGTTCCCAGGGGAAAGTCCAGACAGGAGCGGCTCCGCACAGTaGACGTACGAGGCGCCAAAGAGTGCATGCCTACCAAGGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFPGESPDRSGSAQ*TYEAPKSACLPRRQ Trigger: CTGGCGCCTTGGTAGGCATGCACTCTTTGGCGCCTCGTACGTCCACTGTGCGGAGCCGCTCCTGTCTGGACTTTCCCCTGGGAACAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
||
| CDS TCA 90 bp | AATCACAACGCAGGCCGCAACCTAAGAGGTGAAGCTGGCGGGAAGTaGGCTCCCTTTCTGTTCCCAGGGGAAAGTCCAGACAGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NHNAGRNLRGEAGGK*APFLFPGESPDRSG Trigger: GCCGCTCCTGTCTGGACTTTCCCCTGGGAACAGAAAGGGAGCTCACTTCCCGCCAGCTTCACCTCTTAGGTTGCGGCCTGCGTTGTGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558968.1 |
||
| CDS TCA 90 bp | TTATGGGTGCCACATGTAAAACTAAGAGGTGAAGCTGGCGGGAAGTaGGCTCCCTTTCTGTTCCCAGGGGAAAGTCCAGACAGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWVPHVKLRGEAGGK*APFLFPGESPDRSG Trigger: GCCGCTCCTGTCTGGACTTTCCCCTGGGAACAGAAAGGGAGCTCACTTCCCGCCAGCTTCACCTCTTAGTTTTACATGTGGCACCCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559793.5 |
||
| CDS TCA 90 bp | GTGAACAGAGTCAAAAATCAGATGCCCCTGCCAAGCTTTACAGAATaGGGAGTTGGACAACACAGTTACGTTTGGCTGCACTGTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VNRVKNQMPLPSFTE*GVGQHSYVWLHCGE Trigger: TTCACCACAGTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGCTTGGCAGGGGCATCTGATTTTTGACTCTGTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
||
| CDS GCA 90 bp | GGTTCAGCTCAAGAGCTAAGTGAAAAATGTCTTTTGATTCACTCCTaGTTGTGGATAGAAGTCATCTTCGGGATGGAAGAGGGAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSAQELSEKCLLIHS*LWIEVIFGMEEGVR Trigger: TCTCACTCCCTCTTCCATCCCGAAGATGACTTCTATCCACAAGCAGGAGTGAATCAAAAGACATTTTTCACTTAGCTCTTGAGCTGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTTGGCCCATACATTTTaGTTCCCAGTCCACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HATIKISTSCGSCIREPRLAHTF*FPVHSS Trigger: GGAAGAGTGGACTGGGAACAAAAATGTATGGGCCAA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260327.9 |
||
| CDS-3UTR CAA 90 bp | CAATTTTCCAGATGGTTGACTGAGGAACAAGGAGGTCAAGTGACTTGCCCAAGGGATCATCTCAGACCCTaGTGTATATTTCTTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFSRWLTEEQGGQVTCPRDHLRP*CIFLLC Trigger: GCAAAGAAGAAATATACACAAGGGTCTGAGATGATC...CCTTGGGCAAGTCACTTGACCTCCTTGTTCCTCAGTCAACCATCTGGAAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560620.1 |
||
| CDS TCA 90 bp | GACAGAGGAAGGTCATTGAGGAGGTGGTTCAGCTCAAGAGCTAAGTaGAAAATGTCTTTTGATTCACTCCTGCTTGTGGATAGAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DRGRSLRRWFSSRAK*KMSFDSLLLVDRSH Trigger: ATGACTTCTATCCACAAGCAGGAGTGAATCAAAAGACATTTTTCACTTAGCTCTTGAGCTGAACCACCTCCTCAATGACCTTCCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS-3UTR CAA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAAACTGCATTGGTGGCTaGGGAGTGTACTGTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: VCHCKILPFENIRHHNGLNCIGG*GVYCAT Trigger: TGTGGCACAGTACACTCCCAAGCCACCAATGCAGTT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGTTTGGGTTTCGCTGTTaGAGCATAAAAAGGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: HATIKISTSCGSCIREPRFGFRC*SIKRKG Trigger: TCCCTTCCTTTTTATGCTCAAACAGCGAAACCCAAA...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS TCA 90 bp | TTTACTGATCTTCAGAAAGCCACTGACTGGCTAAAGTCTTATTGGTaGACAGAGTCAAAAATCAGATGCCCCTGCCAAGCTTTACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: FTDLQKATDWLKSYW*TESKIRCPCQALQN Trigger: ATTCTGTAAAGCTTGGCAGGGGCATCTGATTTTTGACTCTGTTCACCAATAAGACTTTAGCCAGTCAGTGGCTTTCTGAAGATCAGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS-3UTR CAA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGACTCGAGATATCTGTTaGTTAGGTTTTTCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: HATIKISTSCGSCIREPRTRDIC*LGFSPA Trigger: AGCAGGAGAAAAACCTAACAAACAGATATCTCGAGT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTAGCTTCTCCATTTACTaGACTTTTCCGTCTTACTCG | + |
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Preference number: 5 (lower is better) Translates to: KSSQTGDQTFSSKICEHSSFSIY*TFPSYS Trigger: CGAGTAAGACGGAAAAGTCAAGTAAATGGAGAAGCT...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGAGTTGGTTTTTATTATaGAAGTGCCCACAGGCACAA | + |
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Preference number: 5 (lower is better) Translates to: HATIKISTSCGSCIREPRSWFLL*KCPQAQ Trigger: TTGTGCCTGTGGGCACTTCAATAATAAAAACCAACT...CCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS GCA 90 bp | CAAGCTTTACAGAATGAGGAGTTGGACAACACAGTTACGTTTGGCTaGACTGTGGTGAAACATATGAGGTATCTTCTTTTTGTCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: QALQNEELDNTVTFG*TVVKHMRYLLFVFN Trigger: ATTGAAGACAAAAAGAAGATACCTCATATGTTTCACCACAGTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS-3UTR CAA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTACTCGAGATATCTGTTaGTTAGGTTTTTCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KSSQTGDQTFSSKICEHSTRDIC*LGFSPA Trigger: AGCAGGAGAAAAACCTAACAAACAGATATCTCGAGT...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAGCCAAACAGGTGACCAAACTTTCTCCTCAAAGATTTGTGAGCACAGTTTCCACAAAACAGGCTaGCTCTACATGCTAGATTTT | + |
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Preference number: 5 (lower is better) Translates to: KSSQTGDQTFSSKICEHSFHKTG*LYMLDF Trigger: AAAATCTAGCATGTAGAGCAAGCCTGTTTTGTGGAA...ACTGTGCTCACAAATCTTTGAGGAGAAAGTTTGGTCACCTGTTTGGCTTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTATTTGGGTTTCGCTGTTaGAGCATAAAAAGGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: VCHCKILPFENIRHHNGLFGFRC*SIKRKG Trigger: TCCCTTCCTTTTTATGCTCAAACAGCGAAACCCAAA...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | CATGCTGAAAGTTCAGATCTTTTAAGTTTTGGGTTTCGCTGTTTGAGCATAAAAAGCTTCTCCATTTACTaGACTTTTCCGTCTTACTCG | + |
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Preference number: 5 (lower is better) Translates to: HAESSDLLSFGFRCLSIKSFSIY*TFPSYS Trigger: CGAGTAAGACGGAAAAGTCAAGTAAATGGAGAAGCT...TTTTATGCTCAAACAGCGAAACCCAAAACTTAAAAGATCTGAACTTTCAGCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | GTGTGCCATTGCAAGATATTACCATTTGAGAATATACGCCATCACAATGGTTTAAGTTGGTTTTTATTATaGAAGTGCCCACAGGCACAA | + |
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Preference number: 5 (lower is better) Translates to: VCHCKILPFENIRHHNGLSWFLL*KCPQAQ Trigger: TTGTGCCTGTGGGCACTTCAATAATAAAAACCAACT...TAAACCATTGTGATGGCGTATATTCTCAAATGGTAATATCTTGCAATGGCACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260327.9 ENST00000558373.5 |
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| CDS-3UTR CAA 90 bp | TTATATCCCCAGAACTCTTGCCTCTGGGCAAGTAATTTCAATTCAAGATACAGACTAAATCTACATTACTaGTTCACGGCTATACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LYPQNSCLWASNFNSRYRLNLHY*FTAILH Trigger: ATGCAGTATAGCCGTGAACAAGTAATGTAGATTTAG...TCTGTATCTTGAATTGAAATTACTTGCCCAGAGGCAAGAGTTCTGGGGATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260327.9 |
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| CDS GCA 72 bp | CGGCTCCGCACAGTGGACGTACGAGGCGCCAAAGAGTaGATGCCTACCAAGGCGCCAGAGCCGCTGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RLRTVDVRGAKE*MPTKAPEPLED Trigger: GTCCTCCAGCGGCTCTGGCGCCTTGGTAGGCATGCACTCTTTGGCGCCTCGTACGTCCACTGTGCGGAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
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| CDS GCA 72 bp | TCCGCACAGTGGACGTACGAGGCGCCAAAGAGTGCATaGCTACCAAGGCGCCAGAGCCGCTGGAGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAQWTYEAPKSA*LPRRQSRWRTR Trigger: CCTGGTCCTCCAGCGGCTCTGGCGCCTTGGTAGGCATGCACTCTTTGGCGCCTCGTACGTCCACTGTGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
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| CDS CCA 72 bp | CCAGGGGAAAGTCCAGACAGGAGCGGCTCCGCACAGTaGACGTACGAGGCGCCAAAGAGTGCATGCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: PGESPDRSGSAQ*TYEAPKSACLP Trigger: TGGTAGGCATGCACTCTTTGGCGCCTCGTACGTCCACTGTGCGGAGCCGCTCCTGTCTGGACTTTCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558968.1 ENST00000559793.5 |
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| CDS TCA 72 bp | GCAGGCCGCAACCTAAGAGGTGAAGCTGGCGGGAAGTaGGCTCCCTTTCTGTTCCCAGGGGAAAGTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: AGRNLRGEAGGK*APFLFPGESPD Trigger: GTCTGGACTTTCCCCTGGGAACAGAAAGGGAGCTCACTTCCCGCCAGCTTCACCTCTTAGGTTGCGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558968.1 |
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| CDS CCA 72 bp | ATGGGTGCCACATGTAAAACAAGGCGCCAGAGCCGCTaGAGGACCAGGTTTAGAAGGGGAGGAGATCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: MGATCKTRRQSR*RTRFRRGGDPG Trigger: GCCGGGATCTCCTCCCCTTCTAAACCTGGTCCTCCAGCGGCTCTGGCGCCTTGTTTTACATGTGGCACCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558966.5 |
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| CDS TCA 72 bp | CCACATGTAAAACTAAGAGGTGAAGCTGGCGGGAAGTaGGCTCCCTTTCTGTTCCCAGGGGAAAGTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: PHVKLRGEAGGK*APFLFPGESPD Trigger: GTCTGGACTTTCCCCTGGGAACAGAAAGGGAGCTCACTTCCCGCCAGCTTCACCTCTTAGTTTTACATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559793.5 |
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| CDS TCA 72 bp | AGGAACTTGAGATCGGAGTGGGGGTGGGTAGCAAAGTaGAATCTAACCCCAGAAATCACAACGCAGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RNLRSEWGWVAK*NLTPEITTQAA Trigger: TGCGGCCTGCGTTGTGATTTCTGGGGTTAGATTTCACTTTGCTACCCACCCCCACTCCGATCTCAAGTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558968.1 |
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| CDS CAA 72 bp | ATCAGATGCCCCTGCCAAGCTTTACAGAATGAGGAGTaGGACAACACAGTTACGTTTGGCTGCACTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IRCPCQALQNEE*DNTVTFGCTVV Trigger: CACCACAGTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGCTTGGCAGGGGCATCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS TCA 72 bp | GTCAAAAATCAGATGCCCCTGCCAAGCTTTACAGAATaGGGAGTTGGACAACACAGTTACGTTTGGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VKNQMPLPSFTE*GVGQHSYVWLH Trigger: GTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGCTTGGCAGGGGCATCTGATTTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS CAA 90 bp | GAGTCAAAAATCAGATGCCCCTGCCAAGCTTTACAGAATGAGGAGTaGGACAACACAGTTACGTTTGGCTGCACTGTGGTGAAACATATG | + |
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Preference number: 6 (lower is better) Translates to: ESKIRCPCQALQNEE*DNTVTFGCTVVKHM Trigger: CATATGTTTCACCACAGTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTGTAAAGCTTGGCAGGGGCATCTGATTTTTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS TCA 72 bp | CACTTTGCATCATCCCTATTCTGGACTGGCTTATTGTaGAGCAAATCTAAGAAATCCTATCACATGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFASSLFWTGLL*SKSKKSYHMGL Trigger: CAGCCCCATGTGATAGGATTTCTTAGATTTGCTTCACAATAAGCCAGTCCAGAATAGGGATGATGCAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559175.1 |
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| CDS GCA 72 bp | CAAGAGCTAAGTGAAAAATGTCTTTTGATTCACTCCTaGTTGTGGATAGAAGTCATCTTCGGGATGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: QELSEKCLLIHS*LWIEVIFGMEE Trigger: CTCTTCCATCCCGAAGATGACTTCTATCCACAAGCAGGAGTGAATCAAAAGACATTTTTCACTTAGCTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS GCA 72 bp | CAGAATGAGGAGTTGGACAACACAGTTACGTTTGGCTaGACTGTGGTGAAACATATGAGGTATCTTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QNEELDNTVTFG*TVVKHMRYLLF Trigger: AAAAAGAAGATACCTCATATGTTTCACCACAGTGCAGCCAAACGTAACTGTGTTGTCCAACTCCTCATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS GCA 72 bp | ACACAGGACAAATCTAGTTTATACTCCAATCCACTTTaGATCATCCCTATTCTGGACTGGCTTATTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TQDKSSLYSNPL*IIPILDWLIVK Trigger: CTTCACAATAAGCCAGTCCAGAATAGGGATGATGCAAAGTGGATTGGAGTATAAACTAGATTTGTCCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559175.1 |
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| CDS CCA 72 bp | CTATCTGTCCTTGAGTGCTTACCACAATCTGATTTCTaGACAGCTGACCCAAAGTTTGTTGATTTTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSVLECLPQSDF*TADPKFVDFTD Trigger: ATCAGTAAAATCAACAAACTTTGGGTCAGCTGTCCAGAAATCAGATTGTGGTAAGCACTCAAGGACAGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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| CDS CAA 72 bp | TACCACAATCTGATTTCTGGACAGCTGACCCAAAGTTaGTTGATTTTACTGATCTTCAGAAAGCCACTGACT | + |
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Preference number: 6 (lower is better) Translates to: YHNLISGQLTQS*LILLIFRKPLT Trigger: AGTCAGTGGCTTTCTGAAGATCAGTAAAATCAACAAACTTTGGGTCAGCTGTCCAGAAATCAGATTGTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561189.1 |
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