RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178971

Ensembl transcript IDs: ENST00000449476.7, ENST00000578240.1, ENST00000578441.5, ENST00000578537.1, ENST00000581671.2, ENST00000581729.1, ENST00000581967.1, ENST00000583254.1, ENST00000584439.1, ENST00000584842.1, ENST00000643543.1, ENST00000651323.1

Found 934 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCACGAAACCTGGTGCCAGGCCAGGCCAGGCCAGCCGGATCCCTaGTTACTCCTTACCCTGACATCCCGCTGGTGGAGAGGGATGGAG +
Preference number: 1 (lower is better)
Translates to: LHETWCQARPGQPDP*LLLTLTSRWWRGME
Trigger: CTCCATCCCTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAAGCAGGGATCCGGCTGGCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 90 bp GGGCTGCCTGGCGGAGCTAGAAGATCCAGGGTAGGAGCCAGGAGTTaGAGTCCCAGGCTGGGGCTCCCAGGAGAGGAATGTTGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: GLPGGARRSRVGARS*SPRLGLPGEECCRN
Trigger: GTTCCTGCAACATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAACTCCTGGCTCCTACCCTGGATCTTCTAGCTCCGCCAGGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 90 bp TTCACATGGCCTCAGCCCTTCTGCACCCTGCTGCACGAAACCTGGTaGCAGGCCAGGCCAGGCCAGCCGGATCCCTGCTTACTCCTTACC +
Preference number: 1 (lower is better)
Translates to: FTWPQPFCTLLHETW*QARPGQPDPCLLLT
Trigger: GGTAAGGAGTAAGCAGGGATCCGGCTGGCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTaGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGCCCCTGC +
Preference number: 1 (lower is better)
Translates to: ALGQALGKPTGLTVA*GPIAQSPRVLTCPC
Trigger: GCAGGGGCAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 90 bp CCATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTaGGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGG +
Preference number: 1 (lower is better)
Translates to: PSSTRSLMMAWLIAV*VGQVEPRRVHFPCR
Trigger: CCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR GCA 90 bp TTTCTTGGACTCTGTTCACATGGCCTCAGCCCTTCTGCACCCTGCTaGACGAAACCTGGTGCCAGGCCAGGCCAGGCCAGCCGGATCCCT +
Preference number: 1 (lower is better)
Translates to: FLGLCSHGLSPSAPC*TKPGARPGQASRIP
Trigger: AGGGATCCGGCTGGCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAACAGAGTCCAAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 90 bp TGCTTTCTTGGACTCTGTTCACATGGCCTCAGCCCTTCTGCACCCTaGTGCACGAAACCTGGTGCCAGGCCAGGCCAGGCCAGCCGGATC +
Preference number: 1 (lower is better)
Translates to: CFLGLCSHGLSPSAP*CTKPGARPGQASRI
Trigger: GATCCGGCTGGCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAACAGAGTCCAAGAAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 90 bp TGCAGTCCCAGGCTGGGGCTCCCAGGAGAGGAATGTTGCAGGAACTaGTGGTGTCTCAGCACATGGGGACACAGCTTGCAGGCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: CSPRLGLPGEECCRN*WCLSTWGHSLQASS
Trigger: GGAGCTGGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCTGCAACATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 90 bp CCATCGAGGGTGGGGCGGCCGCCTGACCCAGTCCACCTGCACCAGTaGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTATGCAA +
Preference number: 1 (lower is better)
Translates to: PSRVGRPPDPVHLHQ*GVASVKQRTLRPMQ
Trigger: TTGCATAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGGGTCAGGCGGCCGCCCCACCCTCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 90 bp GAGGCCCACTCTCTAGGACACAGCCCTAGTGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTCCACC +
Preference number: 1 (lower is better)
Translates to: EAHSLGHSPSAAATW*FLQVTTASAVPSST
Trigger: GGTGGAGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGCACTAGGGCTGTGTCCTAGAGAGTGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 90 bp GCAAGAAGAGCCGGCTCTGTCCTAGGTGGGGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTGAGGGTGTTGCTGAATGAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: ARRAGSVLGGVPLGR*DLSEVLRVLLNEGR
Trigger: CCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGCTCTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 90 bp CGAATGATGCTTTCTTGGACTCTGTTCACATGGCCTCAGCCCTTCTaGACCCTGCTGCACGAAACCTGGTGCCAGGCCAGGCCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: RMMLSWTLFTWPQPF*TLLHETWCQARPGQ
Trigger: CTGGCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAACAGAGTCCAAGAAAGCATCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 90 bp AGGCCCAGGCCTTACGCTGTCCTTCTTCTTTCAGGGTGGCCAGAGTaGGGAAGGAGGAGGGAGTCTGCAGCCGAGTGTATTTCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: RPRPYAVLLLSGWPE*GRRRESAAECISGG
Trigger: CCCTCCAGAAATACACTCGGCTGCAGACTCCCTCCTCCTTCCCCACTCTGGCCACCCTGAAAGAAGAAGGACAGCGTAAGGCCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 90 bp GGGTGGGGCGGCCGCCTGACCCAGTCCACCTGCACCAGTGGGGTGTaGCATCAGTTAAGCAAAGGACCCTTAGGCCTATGCAACATTTCT +
Preference number: 1 (lower is better)
Translates to: GWGGRLTQSTCTSGV*HQLSKGPLGLCNIS
Trigger: AGAAATGTTGCATAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGGGTCAGGCGGCCGCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 90 bp TTCCAGGAAGGGAAGCTGCTTCTCACGTCCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACCAGGCAGCCTATCAGCCGTGGGTCA +
Preference number: 1 (lower is better)
Translates to: FQEGKLLLTSLSTIN*NLSARTRQPISRGS
Trigger: TGACCCACGGCTGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 90 bp TCACCATCACCCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCTGTGAATGC +
Preference number: 1 (lower is better)
Translates to: SPSPHSEQVFCSLSS*DKVRTQVLRAACEC
Trigger: GCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGGGTGATGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp CCCTTCCACACCAGGATCCCTAGCGACTCCCGAATGATGCTTTCTTaGACTCTGTTCACATGGCCTCAGCCCTTCTGCACCCTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: PFHTRIPSDSRMMLS*TLFTWPQPFCTLLH
Trigger: GTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAACAGAGTCCAAGAAAGCATCATTCGGGAGTCGCTAGGGATCCTGGTGTGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 90 bp GACTCTCGGATAGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCTCCACACTGGAATCGCTGTAGCCGA +
Preference number: 1 (lower is better)
Translates to: DSRIERQDNRSLGFT*VRKGSSPHWNRCSR
Trigger: TCGGCTACAGCGATTCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR GCA 90 bp TCAACCCTGGCTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTaGAAGACCACTCTGCCTGGCACTTGGACGAAATCTAGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: STLAEDSSWAPGPAN*KTTLPGTWTKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGCCAGGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR GCA 90 bp GGTGTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGGACTGAAGAGCCAAAGAAAATGAGG +
Preference number: 1 (lower is better)
Translates to: GVAGPGAMSRYTCPG*KNSNQRTEEPKKMR
Trigger: CCTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 90 bp AAGGCTGAAGACAGAGACGATATGGCAAGAGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGG +
Preference number: 1 (lower is better)
Translates to: KAEDRDDMARGSGLE*GLTTLQKFSQVDVG
Trigger: CCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCCTCTTGCCATATCGTCTCTGTCTTCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR CCA 90 bp CACATAGAAACTGAGGGCGGGCTTGGGCACCTCTGGACTTGCTCCTaGGGGGACACAAAAATTACGCTTCATGAGGGCCTCCTTGTGGCA +
Preference number: 1 (lower is better)
Translates to: HIETEGGLGHLWTCS*GDTKITLHEGLLVA
Trigger: TGCCACAAGGAGGCCCTCATGAAGCGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTTCTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 90 bp AAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTaGTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAG +
Preference number: 1 (lower is better)
Translates to: KSFVPSAPATKSEPR*SGPPVNAGALSQSE
Trigger: CTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp GGTCTCAAGGTATATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACA +
Preference number: 1 (lower is better)
Translates to: GLKVYRSRICLRPGP*ETYRANRSLGPYST
Trigger: TGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATATACCTTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp GGGAAAACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGT +
Preference number: 1 (lower is better)
Translates to: GKTQDLETLFSNWLK*TRAPGSSPSEGGKC
Trigger: ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578537.1
3UTR CCA 90 bp GGAGGGAGTCTGCAGCCGAGTGTATTTCTGGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATTGTGTGCATTCCGAACAGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: GGSLQPSVFLEGTVM*LFKDLIVCIPNRAA
Trigger: GGCAGCCCTGTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAAATACACTCGGCTGCAGACTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 90 bp CAGTTAACAGGAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCAGGACAATCGGAGCCTGGGGTTCAC +
Preference number: 1 (lower is better)
Translates to: QLTGGSKDPQRAGVL*LSDRKAGQSEPGVH
Trigger: GTGAACCCCAGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTCCTGTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR TCA 90 bp GGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTaGAGACAGAGACGATATGGCAAGAGGCAGTGGCCTGGAATGGGG +
Preference number: 1 (lower is better)
Translates to: GRCWYNKHTPRRAEG*RQRRYGKRQWPGMG
Trigger: CCCCATTCCAGGCCACTGCCTCTTGCCATATCGTCTCTGTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR GCA 90 bp TCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCTGTGAATaGAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGCCATG +
Preference number: 1 (lower is better)
Translates to: SCDKVRTQVLRAACE*RCLVPIRGHINRAM
Trigger: CATGGCCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGGAAGCAAGGATCCCCAGAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: LGLQVFSKEGLSGHP*SSVNRRKQGSPESW
Trigger: CCAGCTCTCTGGGGATCCTTGCTTCCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR GCA 90 bp GATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAGGATCTaGCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGC +
Preference number: 1 (lower is better)
Translates to: DFGAPSGLKVYRSRI*LRPGPWETYRANRS
Trigger: GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 90 bp ACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTaGCTTGTTCATTTGGTTCTGCACAGGGTCCAGCCCAGTGCTTGG +
Preference number: 1 (lower is better)
Translates to: TSPCSYSAVSAERGT*LVHLVLHRVQPSAW
Trigger: CCAAGCACTGGGCTGGACCCTGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 90 bp AGTGCTTGGCACAAACGTGGTCTCGGCAGTGCTGCATCCCTGGCTTaGCCTGGAGGTAGCAATTCCTTCAAGCCATTTGCTCATCTTACA +
Preference number: 1 (lower is better)
Translates to: SAWHKRGLGSAASLA*PGGSNSFKPFAHLT
Trigger: TGTAAGATGAGCAAATGGCTTGAAGGAATTGCTACCTCCAGGTCAAGCCAGGGATGCAGCACTGCCGAGACCACGTTTGTGCCAAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 90 bp GACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGACATATTAATAGGGCCATGATTTCC +
Preference number: 1 (lower is better)
Translates to: DKVRTQVLRAACECR*LVPIRGHINRAMIS
Trigger: GGAAATCATGGCCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 90 bp GAGTCGGTACACCTGTCCCGGGTGCAAGAACTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAGGTGAACCTTCTGATCATTGTCGTC +
Preference number: 1 (lower is better)
Translates to: ESVHLSRVQELKPAD*RAKENEVNLLIIVV
Trigger: GACGACAATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTACCGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 90 bp TCTCTTCCAAATCACTTTCCACCTTTGGCCCTGGCGGCAAAGGGCTaGAATGATGATGAACGACTAGGAGTTCCTAGGAGGTGGACAACT +
Preference number: 1 (lower is better)
Translates to: SLPNHFPPLALAAKG*NDDERLGVPRRWTT
Trigger: AGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGATTTGGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp GATTCAGGCAATGACTTGTTTGCATCCAGCACATCTTGGATATCCTaGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGACAGTGAGG +
Preference number: 1 (lower is better)
Translates to: DSGNDLFASSTSWIS*ELSSSRVQLSWTVR
Trigger: CCTCACTGTCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 90 bp GTCAGTGAGGATTCAGGCAATGACTTGTTTGCATCCAGCACATCTTaGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: VSEDSGNDLFASSTS*ISWELSSSRVQLSW
Trigger: CCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAATCCTCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 90 bp AATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGCCATaGTTTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGA +
Preference number: 1 (lower is better)
Translates to: NAGALSQSEDILIGP*FPVATILPRQAGTR
Trigger: TCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp CTATGCAACATTTCTGCCCCTAAGTTAGAGAACCACCTTTTAGAGTaGCGATCTCATGGGAGTGGCAGCTTGACTCTGCAGGAAATGTGG +
Preference number: 1 (lower is better)
Translates to: LCNISAPKLENHLLE*RSHGSGSLTLQEMW
Trigger: CCACATTTCCTGCAGAGTCAAGCTGCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTTCTCTAACTTAGGGGCAGAAATGTTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 90 bp CTTCAAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATaGTGTCGAGAGCTTTCTGCCTATCTTCCAAGGAGGTTTAGGTCC +
Preference number: 1 (lower is better)
Translates to: LQAICSSYIGSWAME*CRELSAYLPRRFRS
Trigger: GGACCTAAACCTCCTTGGAAGATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 90 bp CTTGTCCCAATCAGAGGACATATTAATAGGGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAA +
Preference number: 1 (lower is better)
Translates to: LVPIRGHINRAMISC*HNFAKAGWHQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCCCTATTAATATGTCCTCTGATTGGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 90 bp ATCAAATTCTCGATTCTAGAGTTCCTAGATGAGAGGTTTGGAGGGTaGCGACTGGATCATCCCATCCTGGAGAGAAATATGGTCAGTATG +
Preference number: 1 (lower is better)
Translates to: IKFSILEFLDERFGG*RLDHPILERNMVSM
Trigger: CATACTGACCATATTTCTCTCCAGGATGGGATGATCCAGTCGGCACCCTCCAAACCTCTCATCTAGGAACTCTAGAATCGAGAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 90 bp AGCTCATCTTTCCACCTCTCCATCTATCAGTCCCCAGTAAAGAAATaGAGCAACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTT +
Preference number: 1 (lower is better)
Translates to: SSSFHLSIYQSPVKK*SNTSQRHWYLQRIV
Trigger: AACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGACTGATAGATGGAGAGGTGGAAAGATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 90 bp GGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAGGAT +
Preference number: 1 (lower is better)
Translates to: GISKELFLDPLIVRL*FRSTFWSQGISIKD
Trigger: ATCCTTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 90 bp TATCAGTCCCCAGTAAAGAAATGCAGCAACACCAGCCAAAGGCATTaGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTT +
Preference number: 1 (lower is better)
Translates to: YQSPVKKCSNTSQRH*YLQRIVPRSPNCTV
Trigger: AACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGACTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp CTGGGTGCCCCCAAGCCAGCTCCCCAACACATAGAAACTGAGGGCGGGCTTGGGCGGCTCTGTCCTAGGTaGGGTCCCTCTGGGCCGGTG +
Preference number: 2 (lower is better)
Translates to: LGAPKPAPQHIETEGGLGRLCPR*GPSGPV
Trigger: CACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCG...CCCAAGCCCGCCCTCAGTTTCTATGTGTTGGGGAGCTGGCTTGGGGGCACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CAA 90 bp GTCCTAGGTGGGGTCCCTCTGGGCCGGTGGGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAAGGCAGGGTCTGGGCACAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLGGVPLGRWDLSEV*RVLLNEGRVWAQAG
Trigger: TCCTGCCTGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCCACCTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTGCAAGAACTCAGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VAGPGAMSRYTCPGCKNSGSGLE*GLTTLQ
Trigger: CTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCC...TGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: TQVGLQALQTARPLCLALAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR TCA 90 bp GTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTAGCCTGGAATGGGGACTaGCCACCCTGCAGAAGTTCA +
Preference number: 2 (lower is better)
Translates to: VGQVEPRRVHFPCRQMLVAWNGD*PPCRSS
Trigger: TGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGC...TACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR TCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCCGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: RKAGQSEPGVHVSQERELRGQEL*VGTPVP
Trigger: CGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCG...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACATCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: RASGAQASALSLPADAGTSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR CCA 90 bp GTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTGCAAGAACTCATTGTCGTCATTTCCCTaGGGCTCGGGCAGCCCCCAT +
Preference number: 2 (lower is better)
Translates to: VAGPGAMSRYTCPGCKNSLSSFP*GSGSPH
Trigger: ATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAA...TGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GGTCCAGCCCAGTGCTTGGCACAAACGTGGTCTCGGCAGTGCTGCATCCCTGGCTCGTGGGCCATGGAATaGTGTCGAGAGCTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: GPAQCLAQTWSRQCCIPGSWAME*CRELSA
Trigger: GGCAGAAAGCTCTCGACACCATTCCATGGCCCACGA...GCCAGGGATGCAGCACTGCCGAGACCACGTTTGTGCCAAGCACTGGGCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR TCA 90 bp GTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTGCAAGAACTCACCAACACATAGAAACTaGGGGCGGGCTTGGGCACCT +
Preference number: 2 (lower is better)
Translates to: VAGPGAMSRYTCPGCKNSPTHRN*GRAWAP
Trigger: AGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGG...TGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTCCACCAGGAGTTGCAGTCCCAGGCTaGGGCTCCCAGGAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: HGDSYRSPRLRQSHPPPGVAVPG*GSQERN
Trigger: ATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAAC...TCCTGGTGGAGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: GPPVNAGALSQSEDILIGAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp CTGCTGCCACATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: LLPHGDSYRSPRLRQSHPFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...AGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATGTGGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR GCA 90 bp GTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTGCAAGAACTCATTGGGCTCCAGGCCCTaGAAACTGCAAGACCACTCT +
Preference number: 2 (lower is better)
Translates to: VAGPGAMSRYTCPGCKNSLGSRP*KLQDHS
Trigger: AGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAA...TGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTAGGCAGGATTCGAACCTaGGCGGGGAGACCCCAATGG +
Preference number: 2 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLGRIRT*AGRPQW
Trigger: CCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCC...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCGGGAGCTCTCCACACTaGAATCGCTGTAGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPGSSPH*NRCSRG
Trigger: TCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCC...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPTARKK*PPSSSE
Trigger: TTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGT...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCTGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLCSLSS*DKVRTQ
Trigger: CTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACA...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTTCCCCAGTAAAGAAATaGAGCAACACCAGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPSPVKK*SNTSQR
Trigger: CCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGA...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGGAGTTCCTAGGAGGTaGACAACTAGGAGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLGVPRR*TTRSQE
Trigger: CTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGATCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: TIGAWGSRESGKGALHTGSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTGGTGTCTCAGCACATaGGGACACAGCTTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: RKAGQSEPGVHVSQERELWCLST*GHSLQA
Trigger: GGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCA...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGAATGAAGGCAGGGTCTaGGCACAGGCAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: LKTQVGLQALQTARPLCLNEGRV*AQAGSG
Trigger: CCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATT...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTTCTTACATTGGTTCGTaGGCCATGGAATGGTGTCGA +
Preference number: 2 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPSYIGS*AMEWCR
Trigger: TCGACACCATTCCATGGCCCACGAACCAATGTAAGA...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR TCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTCCTTCTTTGTGCTTGTaGACACCTCTAGGCATTCAT +
Preference number: 2 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPPSLCL*TPLGIH
Trigger: ATGAATGCCTAGAGGTGTTCACAAGCACAAAGAAGG...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCGGCAGAAGGATCACTTaGGCTCAGGAGGTGGAGATC +
Preference number: 2 (lower is better)
Translates to: SRICLRPGPWETYRANRSGRRIT*AQEVEI
Trigger: GATCTCCACCTCCTGAGCTCAAGTGATCCTTCTGCC...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACC +
Preference number: 2 (lower is better)
Translates to: RKAGQSEPGVHVSQERELLSTIN*NLSART
Trigger: GGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAG...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTAAGGGCCGCCTGTGAATaGAGGTGCCTTGTCCCAATC +
Preference number: 2 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLRAACE*RCLVPI
Trigger: GATTGGGACAAGGCACCTGCATTCACAGGCGGCCCT...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTTACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGG +
Preference number: 2 (lower is better)
Translates to: TQVGLQALQTARPLCLALYTCPG*KNSNQR
Trigger: CCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTA...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp GGTCCAGCCCAGTGCTTGGCACAAACGTGGTCTCGGCAGTGCTGCATCCCTGGCTGCAGGAAATGTGGGTaGTATGAGTGCAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: GPAQCLAQTWSRQCCIPGCRKCG*YECRTE
Trigger: TTCTGTTCTGCACTCATAGCACCCACATTTCCTGCA...GCCAGGGATGCAGCACTGCCGAGACCACGTTTGTGCCAAGCACTGGGCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCGGCCAGCCGGATCCCTaGTTACTCCTTACCCTGACA +
Preference number: 2 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCGQPDP*LLLTLT
Trigger: TGTCAGGGTAAGGAGTAAGCAGGGATCCGGCTGGCC...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCGCTGAAGACTCAAGTTaGGCTCCAGGCCCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: RKAGQSEPGVHVSQERELAEDSS*APGPAN
Trigger: GTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGC...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCTGGGCTCGTCAACCCTaGCTGAAGACTCAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: SRICLRPGPWETYRANRSWARQP*LKTQVG
Trigger: CCCAACTTGAGTCTTCAGCCAGGGTTGACGAGCCCA...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCGTGAGACCCCATCTCTaGGCTGGGCAGAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFVRPHL*AGQKAE
Trigger: CTCTGCCTTCTGCCCAGCCCAGAGATGGGGTCTCAC...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CAA 90 bp CAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGTCTTTaGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: QVNRPVTITPQRASL*FPQLLRQSQNPGAQ
Trigger: CTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGTTGGGCTCCAGGCCCTaGAAACTGCAAGACCACTCT +
Preference number: 2 (lower is better)
Translates to: LQGPALLTETIIAMLSALLGSRP*KLQDHS
Trigger: AGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAA...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp CCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTGAAGACGACAGTGAGGCAGGATaGACAGCCAGCCAACTCCAG +
Preference number: 2 (lower is better)
Translates to: PADAGTISTHPEELKAEDDSEAG*TASQLQ
Trigger: CTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTC...GTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTGCAGCCTATCAGCCGTaGGTCACTGAGGGGTTGAGA +
Preference number: 2 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAAAYQP*VTEGLR
Trigger: TCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGC...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGAGAGTCCAGTTGTCCTaGACAGTGAGGCAGGATGCA +
Preference number: 2 (lower is better)
Translates to: LKTQVGLQALQTARPLCLRVQLS*TVRQDA
Trigger: TGCATCCTGCCTCACTGTCCAGGACAACTGGACTCT...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCCTGGCGGCAAAGGGCTaGAATGATGATGAACGACTA +
Preference number: 2 (lower is better)
Translates to: RKAGQSEPGVHVSQERELLAAKG*NDDERL
Trigger: TAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAG...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR TCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCCCGGTGGGATCTGTCTaGGGTGTTGAGGGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSPVGSV*GVEGVA
Trigger: AGCAACACCCTCAACACCTCAGACAGATCCCACCGG...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGACCAGAGGGCTTCATTaGAGGTCAATAGGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRTRGLH*RSIGLS
Trigger: TGACAGGCCTATTGACCTGCAATGAAGCCCTCTGGT...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCATTCCGAACAGGGCTaGCTGGCGGAGCTAGAAGAT +
Preference number: 2 (lower is better)
Translates to: PALLTETIIAMLSALPPTHSEQG*LAELED
Trigger: ATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATG...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWTLPGT*TKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGT...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAAC +
Preference number: 2 (lower is better)
Translates to: EEARIPRELEYSDSRIERLRPGP*ETYRAN
Trigger: GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAG...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGTTACCAGAAGGCAACTaGCTCCGGGTAGAAACTTCC +
Preference number: 2 (lower is better)
Translates to: LKTQVGLQALQTARPLCLLPEGN*LRVETS
Trigger: GGAAGTTTCTACCCGGAGCCAGTTGCCTTCTGGTAA...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449476.7
3UTR-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCTGGAGTAGCAGTTTGTaGATCTGGAGTCCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: SRICLRPGPWETYRANRSWSSSL*IWSPWF
Trigger: GAACCAAGGACTCCAGATTCACAAACTGCTACTCCA...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCCCAGCCTTACTGACTaGGACCATCATAGCTATGCT +
Preference number: 2 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCPSLTD*DHHSYA
Trigger: AGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGCTAGGCATTCATATTTaGCTTCCTGCAGGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: EEARIPRELEYSDSRIERLGIHI*LPAGPS
Trigger: GCTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAG...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: PALLTETIIAMLSALPPTACECR*LVPIRG
Trigger: TCCTCTGATTGGGACAAGGCACCTGCATTCACAGGC...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTTCCTTTCACCCGGGTaGCCAGAGACTCCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTFLSPG*PETPPS
Trigger: GGAGGGAGGAGTCTCTGGGCACCCGGGTGAAAGGAA...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGTCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRSHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGGGCAGGGAACCACTTTaGTCCCGAAGTTGCAGACAA +
Preference number: 2 (lower is better)
Translates to: EEARIPRELEYSDSRIERGREPL*SRSCRQ
Trigger: TTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCC...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCTGGCGGCAAAGGGCTaGAATGATGATGAACGACTA +
Preference number: 2 (lower is better)
Translates to: PALLTETIIAMLSALPPTLAAKG*NDDERL
Trigger: TAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAG...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTACTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGG +
Preference number: 2 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLLIVRL*FRSTFW
Trigger: CCAGAAGGTGCTCCGAAATCACAACCGTACAATTAG...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR TCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTAAGCCAGGCGGCGATTaGGTTGGCAGCTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPKPGGD*VGSWAG
Trigger: ACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCLKPAD*RAKENE
Trigger: CTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGAAACATCTGCCTCCATaGAAGCGCTTCAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRKHLPP*KRFREK
Trigger: TTTTTCCCTGAAGCGCTTTCATGGAGGCAGATGTTT...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGACTGCAAGACCACTCTaGCTGGCACTTGGACGAAAT +
Preference number: 2 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGTARPL*LALGRN
Trigger: ATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGT...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCACCAGAGGGCTTCATTaGAGGTCAATAGGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFTRGLH*RSIGLS
Trigger: TGACAGGCCTATTGACCTGCAATGAAGCCCTCTGGT...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp CCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTGAAGACTTCCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 2 (lower is better)
Translates to: PADAGTISTHPEELKAEDFPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAA...GTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCAGAGGAACATGGTCATaGGCTCGTCAACCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCARGTWS*ARQPWL
Trigger: CAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCGGATCCCCAGAGAGCTaGAGTACTCTGACTCTCGGA +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCAGSPES*STLTLG
Trigger: TCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCC...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATT +
Preference number: 2 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQEGTVM*LFKDLI
Trigger: AATGAGATCCTTGAAGAGCCACATCACTGTCCCCTC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTAACCACCTTTTAGAGTaGCGATCTCATGGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: PALLTETIIAMLSALPPTNHLLE*RSHGSG
Trigger: GCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CAA 90 bp CTGCATCCCTGGCTTGACCTGGAGGTAGCAATTCCTTCAAGCCATTaGCTCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGA +
Preference number: 2 (lower is better)
Translates to: LHPWLDLEVAIPSSH*LILHWFVGHGMVSR
Trigger: TCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGAAGGAATTGCTACCTCCAGGTCAAGCCAGGGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACAGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TVPLVLKGERALFIWFCTACECR*LVPIRG
Trigger: TCCTCTGATTGGGACAAGGCACCTGCATTCACAGGC...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGAAAGGATCTCATTGTGTaGATTCCGAACAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGKDLIV*IPNRAA
Trigger: GGCAGCCCTGTTCGGAATGCACACAATGAGATCCTT...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCARAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR TCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATCTGGGACCCCAGAGATaGGTACCAGTGAGAAATGAC +
Preference number: 2 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYLGPQR*VPVRND
Trigger: GTCATTTCTCACTGGTACTCATCTCTGGGGTCCCAG...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCACTGCAAGACCACTCTaGCTGGCACTTGGACGAAAT +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCATARPL*LALGRN
Trigger: ATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCTTCCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCAFPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAA...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCATCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: LEVVLVREASVGLLYIHPSHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCCTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 2 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVPAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR TCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR TCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTGTCCTCACCTGCCCCTaGTTGTGCCTGGCACTTGCC +
Preference number: 2 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIVLTCP*LCLALA
Trigger: GGCAAGTGCCAGGCACAAGCAGGGGCAGGTGAGGAC...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp CCACAAGGGGTTCACATAGTGTCCGTGACAAAATCTCAGCGGAGAAAGACACCAGAGGACGCCGAGATATaGAGGATGAACCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: PQGVHIVSVTKSQRRKTPEDAEI*RMNHPF
Trigger: AAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTC...TGGTGTCTTTCTCCGCTGAGATTTTGTCACGGACACTATGTGAACCCCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGTLPGT*TKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGT...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTATCACTTTCCACCTTTaGCCCTGGCGGCAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPITFHL*PWRQRA
Trigger: AGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGAT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp AATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATGACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCT +
Preference number: 2 (lower is better)
Translates to: NSHSAVSRATVSFTHLLMTLFSN*LKWTRA
Trigger: AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGT...CATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR CCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTACCCTGACATCCCGCTaGTGGAGAGGGATGGAGGTA +
Preference number: 2 (lower is better)
Translates to: TPAKGIGISKELFLDPLITLTSR*WRGMEV
Trigger: TACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGT...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR TCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 2 (lower is better)
Translates to: LQGPALLTETIIAMLSALILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTAATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 2 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR TCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTTTCTGGAGGGGACAGTaGTGTGGCTCTTCAAGGATC +
Preference number: 2 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPFWRGQ*CGSSRI
Trigger: GATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAA...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR GCA 90 bp CCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTGTGGGTGCTATGAGTaGAGAACAGAAACTCTTACG +
Preference number: 2 (lower is better)
Translates to: PVLTVPLVLKGERALFIWCGCYE*RTETLT
Trigger: CGTAAGAGTTTCTGTTCTGCACTCATAGCACCCACA...CCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAGTGTCCAGAGGAACATaGTCATGGGCTCGTCAACCC +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQVSRGT*SWARQP
Trigger: GGGTTGACGAGCCCATGACCATGTTCCTCTGGACAC...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR CCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAAC +
Preference number: 2 (lower is better)
Translates to: TPAKGIGISKELFLDPLILRPGP*ETYRAN
Trigger: GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAG...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR TCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 2 (lower is better)
Translates to: YRSRICLRPGPWETYRANILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACTGTTGCCACAATTTTaGCAAGGCAGGCTGGCACCA +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQLLPQF*QGRLAP
Trigger: TGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQCSLSS*DKVRTQ
Trigger: CTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR GCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACCAGGAGAGGAATGTTaGAGGAACTGGTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQPGEEC*RNWWCL
Trigger: GAGACACCACCAGTTCCTGCAACATTCCTCTCCTGG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CCA 90 bp AATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATGAGCCTGATGATGGCCTaGCTTATAGCTGTCTGCGTA +
Preference number: 2 (lower is better)
Translates to: NSHSAVSRATVSFTHLLMSLMMA*LIAVCV
Trigger: TACGCAGACAGCTATAAGCCAGGCCATCATCAGGCT...CATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR TCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLRAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACTATGCTCTCTGCCTTaGCGCCAACTCCCCAATTTA +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQLCSLP*RQLPNL
Trigger: TAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: TPAKGIGISKELFLDPLIFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCTACCATTTCTTCTGCTaGACGAAAAGCTCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: QILTARKKWPPSSSERCAYHFFC*TKSSSL
Trigger: AAGAGAAGAGCTTTTCGTCCAGCAGAAGAAATGGTA...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQTARKK*PPSSSE
Trigger: TTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CAA 90 bp TACATGAAAGGATGTGGATTTAGCCGCAAAATCACGCTGTTTCAATaGAATAAAGGCACCGCTGGGATTCGAACCCAGGATCTCCTGTTT +
Preference number: 2 (lower is better)
Translates to: YMKGCGFSRKITLFQ*NKGTAGIRTQDLLF
Trigger: AAACAGGAGATCCTGGGTTCGAATCCCAGCGGTGCCTTTATTCAATTGAAACAGCGTGATTTTGCGGCTAAATCCACATCCTTTCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATTACCATTTCTTCTGCTaGACGAAAAGCTCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYYHFFC*TKSSSL
Trigger: AAGAGAAGAGCTTTTCGTCCAGCAGAAGAAATGGTA...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATACCAGCCAAAGGCATTaGTATCTCCAAAGAATTGTT +
Preference number: 2 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYTSQRH*YLQRIV
Trigger: AACAATTCTTTGGAGATACCAATGCCTTTGGCTGGT...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTCTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVILSGHP*SSVNRR
Trigger: CCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAG...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR-3UTR GCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: TPAKGIGISKELFLDPLIAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATTTCGGAGCACCTTCTaGTCTCAAGGTATATCGATC +
Preference number: 2 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQFRSTF*SQGISI
Trigger: GATCGATATACCTTGAGACCAGAAGGTGCTCCGAAA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 72 bp ACCTGGTGCCAGGCCAGGCCAGGCCAGCCGGATCCCTaGTTACTCCTTACCCTGACATCCCGCTGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: TWCQARPGQPDP*LLLTLTSRWWR
Trigger: TCTCCACCAGCGGGATGTCAGGGTAAGGAGTAAGCAGGGATCCGGCTGGCCTGGCCTGGCCTGGCACCAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 72 bp GTGGGGCGGCCGCCTGACCCAGTCCACCTGCACCAGTaGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGG +
Preference number: 3 (lower is better)
Translates to: VGRPPDPVHLHQ*GVASVKQRTLR
Trigger: CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGGGTCAGGCGGCCGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 72 bp GCCGGCTCTGTCCTAGGTGGGGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTGAGGGTGTTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: AGSVLGGVPLGR*DLSEVLRVLLN
Trigger: ATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 72 bp GTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTaGCTGGCACTTGGACGAAATCTAGGAGGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: VGLQALQTARPL*LALGRNLGGRP
Trigger: GGGCCTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR GCA 72 bp GTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTaGTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: VPSAPATKSEPR*SGPPVNAGALS
Trigger: GGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 72 bp CCCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: PHSEQVFCSLSS*DKVRTQVLRAA
Trigger: GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp CAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTaGGGCCCTATAGCACAGTCACCCAGAGTCCTCACC +
Preference number: 3 (lower is better)
Translates to: QALGKPTGLTVA*GPIAQSPRVLT
Trigger: GGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp GGCCGCCTGACCCAGTCCACCTGCACCAGTGGGGTGTaGCATCAGTTAAGCAAAGGACCCTTAGGCCTATGC +
Preference number: 3 (lower is better)
Translates to: GRLTQSTCTSGV*HQLSKGPLGLC
Trigger: GCATAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGGGTCAGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 72 bp CTTTCTTGGACTCTGTTCACATGGCCTCAGCCCTTCTaGACCCTGCTGCACGAAACCTGGTGCCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LSWTLFTWPQPF*TLLHETWCQAR
Trigger: CCTGGCCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGGGCTGAGGCCATGTGAACAGAGTCCAAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 72 bp AGGCTGGGGCTCCCAGGAGAGGAATGTTGCAGGAACTaGTGGTGTCTCAGCACATGGGGACACAGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: RLGLPGEECCRN*WCLSTWGHSLQ
Trigger: CTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCTGCAACATTCCTCTCCTGGGAGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 72 bp ACTGAGGGCGGGCTTGGGCACCTCTGGACTTGCTCCTaGGGGGACACAAAAATTACGCTTCATGAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: TEGGLGHLWTCS*GDTKITLHEGL
Trigger: GAGGCCCTCATGAAGCGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCCACCAGAGGGCTTCATaGCAGGTCAATAGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLHQRAS*QVNRPV
Trigger: GACAGGCCTATTGACCTGCAATGAAGCCCTCTGGTG...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 3 (lower is better)
Translates to: SRICLRPGPWETYRANRSPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTAGCTTGTGCCTGGCACTaGCCTCCCCCTACACCTTCT +
Preference number: 3 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLACAWH*PPPTPS
Trigger: AGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGC...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGACAAGCCAGGCGGCGATaGAGTTGGCAGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGQARRR*SWQLGR
Trigger: CCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTG...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 72 bp GGGAAGCTGCTTCTCACGTCCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACCAGGCAGCCTATCAGC +
Preference number: 3 (lower is better)
Translates to: GKLLLTSLSTIN*NLSARTRQPIS
Trigger: GCTGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 72 bp TCTCTAGGACACAGCCCTAGTGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACGGCTTCGGCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: SLGHSPSAAATW*FLQVTTASAVP
Trigger: TGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGCACTAGGGCTGTGTCCTAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 72 bp ACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTaGGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTT +
Preference number: 3 (lower is better)
Translates to: TRSLMMAWLIAV*VGQVEPRRVHF
Trigger: AAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR GCA 72 bp TCTCACGTCCCTCTCTACGATCAACTGAAACCTCTCTaGCCGCACCAGGCAGCCTATCAGCCGTGGGTCACT +
Preference number: 3 (lower is better)
Translates to: SHVPLYDQLKPL*PHQAAYQPWVT
Trigger: AGTGACCCACGGCTGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 72 bp GGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGGACTGAAGAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: GPGAMSRYTCPG*KNSNQRTEEPK
Trigger: CTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 72 bp GGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAGGCCCACTCTCTAGGA +
Preference number: 3 (lower is better)
Translates to: GPANCKTTLPGT*TKSRREAHSLG
Trigger: TCCTAGAGAGTGGGCCTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR CCA 72 bp GTATATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCC +
Preference number: 3 (lower is better)
Translates to: VYRSRICLRPGP*ETYRANRSLGP
Trigger: GGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGCCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 3 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp GTAGCGGGGCCAGGAGCTATGAGTCGGTACACCTGTCCCGGGTGCAAGAACTCATCTAGGCATTCATATTaGACTTCCTGCAGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: VAGPGAMSRYTCPGCKNSSRHSY*TSCRAQ
Trigger: CTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAGA...TGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGGCTTGTGCCTGGCACTaGCCTCCCCCTACACCTTCT +
Preference number: 3 (lower is better)
Translates to: EEARIPRELEYSDSRIERACAWH*PPPTPS
Trigger: AGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGC...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR CCA 72 bp CAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGA +
Preference number: 3 (lower is better)
Translates to: QDLETLFSNWLK*TRAPGSSPSEG
Trigger: TCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578537.1
3UTR CCA 72 bp GACAGAGACGATATGGCAAGAGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: DRDDMARGSGLE*GLTTLQKFSQV
Trigger: TACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCCTCTTGCCATATCGTCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR CCA 72 bp GAGGTGTTGAGGGTGTTGCTGAATGAAGGCAGGGTCTaGGCACAGGCAGGATCAGGGCATCAGCCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: EVLRVLLNEGRV*AQAGSGHQPER
Trigger: TCTTTCTGGCTGATGCCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCACCAGAGGGCTTCATaGCAGGTCAATAGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: LQGPALLTETIIAMLSALHQRAS*QVNRPV
Trigger: GACAGGCCTATTGACCTGCAATGAAGCCCTCTGGTG...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 72 bp GGAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCAGGACAATCGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GGSKDPQRAGVL*LSDRKAGQSEP
Trigger: AGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR TCA 72 bp CGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCCAATCAGAGGACATAT +
Preference number: 3 (lower is better)
Translates to: RQSQNPGAQGRL*MQVPCPNQRTY
Trigger: ATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 72 bp AGAACTGGACATAGACTCTGGCCTGCTGCTTCTGGATaGAGCCTGGCATGCTCAGCTCCTTCCAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: RTGHRLWPAASG*SLACSAPSRKG
Trigger: TCCCTTCCTGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 72 bp AGAACCCAGGTGCTCAGGGCCGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGACATATTAATAGGGCC +
Preference number: 3 (lower is better)
Translates to: RTQVLRAACECR*LVPIRGHINRA
Trigger: GGCCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp GGGAAAACTCAGGACCTGGAAACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCT +
Preference number: 3 (lower is better)
Translates to: GKTQDLETLFSN*LKWTRAPGSSP
Trigger: AGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578537.1
3UTR CCA 72 bp CTTGGCACAAACGTGGTCTCGGCAGTGCTGCATCCCTaGCTTGACCTGGAGGTAGCAATTCCTTCAAGCCAT +
Preference number: 3 (lower is better)
Translates to: LGTNVVSAVLHP*LDLEVAIPSSH
Trigger: ATGGCTTGAAGGAATTGCTACCTCCAGGTCAAGCCAGGGATGCAGCACTGCCGAGACCACGTTTGTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 72 bp AGGCCTGGGACCCCAGAGATGAGTACCAGTGAGAAATaGCACCAGAGGGCTTCATTGCAGGTCAATAGGCCT +
Preference number: 3 (lower is better)
Translates to: RPGTPEMSTSEK*HQRASLQVNRP
Trigger: AGGCCTATTGACCTGCAATGAAGCCCTCTGGTGTCATTTCTCACTGGTACTCATCTCTGGGGTCCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 72 bp AAACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTG +
Preference number: 3 (lower is better)
Translates to: KLRTWKPFSPTG*SGPGLLEVVLV
Trigger: CACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578537.1
3UTR TCA 72 bp CACAAACGTGGTCTCGGCAGTGCTGCATCCCTGGCTTaGCCTGGAGGTAGCAATTCCTTCAAGCCATTTGCT +
Preference number: 3 (lower is better)
Translates to: HKRGLGSAASLA*PGGSNSFKPFA
Trigger: AGCAAATGGCTTGAAGGAATTGCTACCTCCAGGTCAAGCCAGGGATGCAGCACTGCCGAGACCACGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 72 bp GCACCTTCTGGTCTCAAGGTATATCGATCAAGGATCTaGCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCT +
Preference number: 3 (lower is better)
Translates to: APSGLKVYRSRI*LRPGPWETYRA
Trigger: AGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATATACCTTGAGACCAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp TCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTTTCATCCAGAGAGACG +
Preference number: 3 (lower is better)
Translates to: SQERLLASHTFS*PPCSPVSSRET
Trigger: CGTCTCTCTGGATGAAACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR TCA 72 bp CATTGTGAGATCTGGAAACCCTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTG +
Preference number: 3 (lower is better)
Translates to: HCEIWKPFSPTG*SGPGLLEVVLV
Trigger: CACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGATCTCACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: GPPVNAGALSQSEDILIGGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCGCTATGCTCTCTGCCTaGCCGCCAACTCCCCAATTT +
Preference number: 3 (lower is better)
Translates to: QILTARKKWPPSSSERCAAMLSA*PPTPQF
Trigger: AAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGC...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTTTCTTACTTCCCTaGACTGACAAACATCTGCCT +
Preference number: 3 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRPFLLP*TDKHLP
Trigger: AGGCAGATGTTTGTCAGTCAAGGGAAGTAAGAAAGG...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATCATGGGAGTGGCAGCTaGACTCTGCAGGAAATGTGG +
Preference number: 3 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYHGSGS*TLQEMW
Trigger: CCACATTTCCTGCAGAGTCAAGCTGCCACTCCCATG...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 72 bp GGAGTCTGCAGCCGAGTGTATTTCTGGAGGGGACAGTaGTGTGGCTCTTCAAGGATCTCATTGTGTGCATTC +
Preference number: 3 (lower is better)
Translates to: GVCSRVYFWRGQ*CGSSRISLCAF
Trigger: GAATGCACACAATGAGATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAAATACACTCGGCTGCAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 72 bp CACCTGTCCCGGGTGCAAGAACTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAGGTGAACCTTCTGATC +
Preference number: 3 (lower is better)
Translates to: HLSRVQELKPAD*RAKENEVNLLI
Trigger: GATCAGAAGGTTCACCTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR GCA 72 bp CAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGGAAGCAAGGATCCCCA +
Preference number: 3 (lower is better)
Translates to: QVFSKEGLSGHP*SSVNRRKQGSP
Trigger: TGGGGATCCTTGCTTCCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
3UTR CCA 72 bp CTGCAGCCGAGTGTATTTCTGGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATTGTGTGCATTCCGAAC +
Preference number: 3 (lower is better)
Translates to: LQPSVFLEGTVM*LFKDLIVCIPN
Trigger: GTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAAATACACTCGGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCTTTACAGACTGATTTaGGTACCATTTCTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRLYRLI*VPFLLL
Trigger: CAGCAGAAGAAATGGTACCAAAATCAGTCTGTAAAG...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTACTTTGGTCCCGAAGTaGCAGACAACCTTTATGAGA +
Preference number: 3 (lower is better)
Translates to: RASLLFPQLLRQSQNPGATLVPK*QTTFMR
Trigger: TCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGT...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR CCA 72 bp CCCAAACACGAACAAATCCTAACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAAAGATGTGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: PKHEQILTARKK*PPSSSERCASA
Trigger: AGCTGAGGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTGTTCGTGTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp GTAACTGCAAGTGAAAGACCAGTTAGAGGACCGCATCTGGAAGCTGTGCCAAATTGGCTCTTGCATCACTaGTCCATTCCTCGGATTTCC +
Preference number: 3 (lower is better)
Translates to: VTASERPVRGPHLEAVPNWLLHH*SIPRIS
Trigger: GGAAATCCGAGGAATGGACAAGTGATGCAAGAGCCA...ATTTGGCACAGCTTCCAGATGCGGTCCTCTAACTGGTCTTTCACTTGCAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 72 bp CGAAAAGCTCTTCTCTTCCAAATCACTTTCCACCTTTaGCCCTGGCGGCAAAGGGCTGAAATGATGATGAAC +
Preference number: 3 (lower is better)
Translates to: RKALLFQITFHL*PWRQRAEMMMN
Trigger: GTTCATCATCATTTCAGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGATTTGGAAGAGAAGAGCTTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp ATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATaGTGTCGAGAGCTTTCTGCCTATCTTCCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: ICSSYIGSWAME*CRELSAYLPRR
Trigger: CCTCCTTGGAAGATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp GGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTAGGTGCAATATAATTCTGTTACAGCGAGCAAGTCTTTaGTTCCCTCAGCTCCTGCGA +
Preference number: 3 (lower is better)
Translates to: GALVIQGIGSSRCNIILLQRASL*FPQLLR
Trigger: TCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTG...TAACAGAATTATATTGCACCTACTGCTTCCTATTCCCTGAATCACTAGCGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGCTATGCTCTCTGCCTaGCCGCCAACTCCCCAATTT +
Preference number: 3 (lower is better)
Translates to: TPAKGIGISKELFLDPLIAMLSA*PPTPQF
Trigger: AAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGC...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR-3UTR CAA 90 bp GTTAGAGAACCACCTTTTAGAGTGGCGATCTCATGGGAGTGGCAGCTTGACTCTCACCAGCCAAAGGCATaGGTATCTCCAAAGAATTGT +
Preference number: 3 (lower is better)
Translates to: VREPPFRVAISWEWQLDSHQPKA*VSPKNC
Trigger: ACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTG...AGAGTCAAGCTGCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTTCTCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp AATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATGAGGCAGAAGGATCACTaGAGCTCAGGAGGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: NSHSAVSRATVSFTHLLMRQKDH*SSGGGD
Trigger: ATCTCCACCTCCTGAGCTCAAGTGATCCTTCTGCCT...CATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR-3UTR CAA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGACTTTACAGACTGATTTaGGTACCATTTCTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGLYRLI*VPFLLL
Trigger: CAGCAGAAGAAATGGTACCAAAATCAGTCTGTAAAG...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 72 bp GATGTGGATTTAGCCGCAAAATCACGCTGTTTCAATTaGATAAAGGCACCGCTGGGATTCGAACCCAGGATC +
Preference number: 3 (lower is better)
Translates to: DVDLAAKSRCFN*IKAPLGFEPRI
Trigger: GATCCTGGGTTCGAATCCCAGCGGTGCCTTTATTCAATTGAAACAGCGTGATTTTGCGGCTAAATCCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 72 bp ATCAGAGGACATATTAATAGGGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCAGGCTGGCACCAGAAC +
Preference number: 3 (lower is better)
Translates to: IRGHINRAMISC*HNFAKAGWHQN
Trigger: GTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCCCTATTAATATGTCCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR GCA 72 bp GTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTATaGAACATTTCTGCCCCTAAGTTAGAGAACCACCTT +
Preference number: 3 (lower is better)
Translates to: VWHQLSKGPLGL*NISAPKLENHL
Trigger: AAGGTGGTTCTCTAACTTAGGGGCAGAAATGTTGCATAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR GCA 72 bp GAGCTTTCTGCCTATCTTCCAAGGAGGTTTAGGTCCTaGCAAGAGCTCACAGATCCTATTTCTTGCCTTATC +
Preference number: 3 (lower is better)
Translates to: ELSAYLPRRFRS*QELTDPISCLI
Trigger: GATAAGGCAAGAAATAGGATCTGTGAGCTCTTGGCAGGACCTAAACCTCCTTGGAAGATAGGCAGAAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CCA 72 bp AAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATaGAATGGTGTCGAGAGCTTTCTGCCTATCTTCCAA +
Preference number: 3 (lower is better)
Translates to: KPFAHLTLVRGP*NGVESFLPIFQ
Trigger: TTGGAAGATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR-3UTR CAA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTCACCAGAGGGCTTCATaGCAGGTCAATAGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIHQRAS*QVNRPV
Trigger: GACAGGCCTATTGACCTGCAATGAAGCCCTCTGGTG...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CCA 72 bp TGGTCTCAGGGGGAAAACTCAGGACCTGCACATAAGTaGATGACCGGAAACAACAATAAACATTGTGAGATC +
Preference number: 3 (lower is better)
Translates to: WSQGENSGPAHK*MTGNNNKHCEI
Trigger: GATCTCACAATGTTTATTGTTGTTTCCGGTCATCCACTTATGTGCAGGTCCTGAGTTTTCCCCCTGAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643543.1
3UTR TCA 72 bp ACTCTAAATCAAATTCTCGATTCTAGAGTTCCTAGATaGGAGGTTTGGAGGGTGCCGACTGGATCATCCCAT +
Preference number: 3 (lower is better)
Translates to: TLNQILDSRVPR*EVWRVPTGSSH
Trigger: ATGGGATGATCCAGTCGGCACCCTCCAAACCTCTCATCTAGGAACTCTAGAATCGAGAATTTGATTTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR TCA 72 bp AAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGGTCTCAAGGTATATCG +
Preference number: 3 (lower is better)
Translates to: KELFLDPLIVRL*FRSTFWSQGIS
Trigger: CGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTTCGGAGGAAGGGACCTaGGCCCGGCCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPSEEGT*ARPAAM
Trigger: CATGGCGGCTGGCCGGGCCCAGGTCCCTTCCTCCGA...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: VGQVEPRRVHFPCRQMLVRGQEL*VGTPVP
Trigger: CGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCG...TACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR GCA 90 bp CAGAGCAAGAAGAGCCGGCTCTGTCCTAGGTGGGGTCCCTCTGGGCCGGTGGGAAGCTGGGCAGGGACCTaGACGATGATGGACACGTGG +
Preference number: 4 (lower is better)
Translates to: QSKKSRLCPRWGPSGPVGSWAGT*TMMDTW
Trigger: CCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCT...TCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGCTCTTCTTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCGGAGGAAGGGACCTaGGCCCGGCCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCSEEGT*ARPAAM
Trigger: CATGGCGGCTGGCCGGGCCCAGGTCCCTTCCTCCGA...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACATGTCCTCCGAGTTGCTaGGCATGGGGAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RASGAQASALSLPADAGTCPPSC*AWGVAW
Trigger: CCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACA...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp TCGTCAACCCTGGCTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGCGGCTCTGTCCTAGGTaGGGTCCCTCTGGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SSTLAEDSSWAPGPANCKRLCPR*GPSGPV
Trigger: CACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCG...CTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGCCAGGGTTGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCACGGCTCTGTCCTAGGTaGGGTCCCTCTGGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRARLCPR*GPSGPV
Trigger: CACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCG...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
3UTR CAA 72 bp GGGGTCCCTCTGGGCCGGTGGGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAAGGCAGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVPLGRWDLSEV*RVLLNEGRVWA
Trigger: TGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCCAAGTGCCCTTCCCCTaGGGAATTCCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPQVPFP*GIPPGR
Trigger: CCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTG...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCTCAGCCGTGGGTCACTaGGGGGTTGAGAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPSAVGH*GVESAW
Trigger: CCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGA...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGCGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: LKTQVGLQALQTARPLCLRGQEL*VGTPVP
Trigger: CGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCG...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGCGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQRGQEL*VGTPVP
Trigger: CGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCG...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCGTCCTCACCTGCCCCTaGTTGTGCCTGGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAVLTCP*LCLALA
Trigger: GGCAAGTGCCAGGCACAAGCAGGGGCAGGTGAGGAC...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCTCGGAGGAAGGGACCTaGGCCCGGCCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFSEEGT*ARPAAM
Trigger: CATGGCGGCTGGCCGGGCCCAGGTCCCTTCCTCCGA...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTACCCCAAGTAAAACCTaGGCTGGGCAGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPTPSKT*AGQKAE
Trigger: CTCTGCCTTCTGCCCAGCCCAGGTTTTACTTGGGGT...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACAAATGAAGGCAGGGTCTaGGCACAGGCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: RASGAQASALSLPADAGTNEGRV*AQAGSG
Trigger: CCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATT...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLVPLGR*DLSEVL
Trigger: CAACACCTCAGACAGATCCCACCGGCCCAGAGGGAC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCGSGLE*GLTTLQ
Trigger: CTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCC...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTCCTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPPAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGG...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CAA 72 bp CTGGGCCGGTGGGATCTGTCTGAGGTGTTGAGGGTGTaGCTGAATGAAGGCAGGGTCTGGGCACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGRWDLSEVLRV*LNEGRVWAQAG
Trigger: TCCTGCCTGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp GCATTCCGAACAGGGCTGCCTGGCGGAGCTAGAAGATCCAGGGTAGGAGCCAGGAAAGGTCCAGGTCTATaGGCTCACAGCTCAGGACGC +
Preference number: 4 (lower is better)
Translates to: AFRTGLPGGARRSRVGARKGPGL*AHSSGR
Trigger: GCGTCCTGAGCTGTGAGCTCATAGACCTGGACCTTT...CCTGGCTCCTACCCTGGATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACACAAACATGCTGGCGCTaGCCACGGATCTTGGACACT +
Preference number: 4 (lower is better)
Translates to: RASGAQASALSLPADAGTQTCWR*PRILDT
Trigger: AGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTG...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp ATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MAWLIAVCVGQVEPRRVHFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...GTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCGCCTGGAATGGGGACTaGCCACCCTGCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPAWNGD*PPCRSS
Trigger: TGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGC...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCTCCACGACAGGTGGCTaGAGCATGGGAGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPSTTGG*SMGDAG
Trigger: ACCAGCGTCTCCCATGCTGCAGCCACCTGTCGTGGA...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAGGCCGAAGGGCTCTGTaGCACACCAGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILGRRAL*HTSWAG
Trigger: CCCTGCCCAGCTGGTGTGGCACAGAGCCCTTCGGCC...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGGACAGTGAGGCAGGATaGACAGCCAGCCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: ICLRPGPWETYRANRSLGDSEAG*TASQLQ
Trigger: CTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTC...CCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGCTGACCCAGTCCACCTaGACCAGTGGGGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLLTQST*TSGVWH
Trigger: ATGCCACACCCCACTGGTGCAGGTGGACTGGGTCAG...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCCAGGTGGCTGCAGCATaGGAGACGCTGGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPQVAAA*ETLVSL
Trigger: AAGACTCACCAGCGTCTCCCATGCTGCAGCCACCTG...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCCAGGTGGCTGCAGCATaGGAGACGCTGGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLQVAAA*ETLVSL
Trigger: AAGACTCACCAGCGTCTCCCATGCTGCAGCCACCTG...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCTTTGGTCCAGCCTCTTaGGCCCAGGCCTGGTATGCA +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLFGPAS*AQAWYA
Trigger: TGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAA...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGGTTTGGTCCAGCCTCTTaGGCCCAGGCCTGGTATGCA +
Preference number: 4 (lower is better)
Translates to: GLEWGLTTLQKFSQVDVGFGPAS*AQAWYA
Trigger: TGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAA...CCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCCAGGGGGTTCCCATTTaGTCCAGCCTCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAQGVPI*SSLLGP
Trigger: TGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTG...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCCGGCTCTGTCCTAGGTaGGGTCCCTCTGGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFRLCPR*GPSGPV
Trigger: CACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCG...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAGTACCCTCCTTCCTCTaGGTGCCCCCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRAVPSFL*VPPSQL
Trigger: GAGCTGGCTTGGGGGCACCCAGAGGAAGGAGGGTAC...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp AGGAACTGGTGGTGTCTCAGCACATGGGGACACAGCTTGCAGGCCAGCTCCTCCGGGAGCTCTCCACACTaGAATCGCTGTAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RNWWCLSTWGHSLQASSSGSSPH*NRCSRG
Trigger: TCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCC...GGAGGAGCTGGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp ATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGGGATCCCCAGAGAGCTaGAGTACTCTGACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: IAVCVGQVEPRRVHFPCRGSPES*STLTLG
Trigger: TCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCC...CCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGGGCTAACCGTAGCCTaGGGCCCTATAGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLGLTVA*GPIAQS
Trigger: TGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAGAGCAAGAAGAGCCGGCTCTGTCCTAGGTGGGGTCCCTCTGGGCCGGTGGGAACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QSKKSRLCPRWGPSGPVGTARKK*PPSSSE
Trigger: TTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGT...TCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGCTCTTCTTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGTGAGACCCCATCTCTaGGCTGGGCAGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCVRPHL*AGQKAE
Trigger: CTCTGCCTTCTGCCCAGCCCAGAGATGGGGTCTCAC...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGCCCTTCCATCGAGGGTaGGGCGGCCGCCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRPFHRG*GGRLTQ
Trigger: CTGGGTCAGGCGGCCGCCCCACCCTCGATGGAAGGG...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCTGCTGCACGAAACCTaGTGCCAGGCCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALLLHET*CQARPG
Trigger: GCCTGGCCTGGCCTGGCACCAGGTTTCGTGCAGCAG...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGGCAGTGCTGCATCCCTaGCTTGACCTGGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLAVLHP*LDLEVA
Trigger: TGCTACCTCCAGGTCAAGCCAGGGATGCAGCACTGC...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCCCTGCTGCTTCTGGATaGAGCCTGGCATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPPAASG*SLACSA
Trigger: AGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGG...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCCCGGTGGGATCTGTCTaGGGTGTTGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAPVGSV*GVEGVA
Trigger: AGCAACACCCTCAACACCTCAGACAGATCCCACCGG...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGGCAGCCGGTGGGATCTGTCTaGGGTGTTGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LEWGLTTLQKFSQVDVGQPVGSV*GVEGVA
Trigger: AGCAACACCCTCAACACCTCAGACAGATCCCACCGG...CTGCCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTRGQEL*VGTPVP
Trigger: CGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCG...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCGGCCCAGGCCTGGTATaGACTACTGCTCCACGACAG +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELGPGLV*TTAPRQ
Trigger: CTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCC...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTTCCAGTTCCAGCTCCTaGACACATTCTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPSSSSS*THSGFS
Trigger: GCTGAAACCAGAATGTGTGCAGGAGCTGGAACTGGA...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGACCTGCCCCTGCTTGTaGCTGGCACTTGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGTCPCL*LALASP
Trigger: GGGGGAGGCAAGTGCCAGGCACAAGCAGGGGCAGGT...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCGTCCTCACCTGCCCCTaGTTGTGCCTGGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPVLTCP*LCLALA
Trigger: GGCAAGTGCCAGGCACAAGCAGGGGCAGGTGAGGAC...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGCAGGGGGTTCCCATTTaGTCCAGCCTCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQQGVPI*SSLLGP
Trigger: TGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTG...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCCTGAGGAATTCCACCTaGCAGGAGGGAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLLRNST*QEGGNS
Trigger: GGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAG...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCATTCCGAACAGGGCTGCCTGGCGGAGCTAGAAGATCCAGGGTAGGAGCCAGGACGATGATGGACACGTaGGTGACAGCTGGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: AFRTGLPGGARRSRVGARTMMDT*VTAGCD
Trigger: ATCACACCCAGCTGTCACCCACGTGTCCATCATCGT...CCTGGCTCCTACCCTGGATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCCGAGTTGCTGGGCATaGGGAGTGGCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCPSCWA*GVAWGQ
Trigger: CTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TCGTCAACCCTGGCTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGGTTGCAGTCCCAGGCTaGGGCTCCCAGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SSTLAEDSSWAPGPANCKVAVPG*GSQERN
Trigger: ATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAAC...CTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGCCAGGGTTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCGTTGCAGTCCCAGGCTaGGGCTCCCAGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSVAVPG*GSQERN
Trigger: ATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAAC...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGGGTTGAGAGTGCTTaGCCAGGAGCAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGVESA*PGAGRA
Trigger: TGCCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGSGLE*GLTTLQ
Trigger: CTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLLRPGP*ETYRAN
Trigger: GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAG...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCCAAACATGCTGGCGCTaGCCACGGATCTTGGACACT +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPQTCWR*PRILDT
Trigger: AGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTG...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGAAGGGGAAGTCCTAACTaGCGTTCCCACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TIGAWGSRESGKGALHTGRGSPN*RSHTSC
Trigger: GCAGCTGGTGTGGGAACGTCAGTTAGGACTTCCCCT...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTAAGCCAGGCGGCGATTaGGTTGGCAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAKPGGD*VGSWAG
Trigger: ACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTT...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTGATGTGGCTCTTCAAGGATCTCATTGTGTGCATTCCGAACAGGGCTGCCTGGAAGCCAGGCGGCGATTaGGTTGGCAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VMWLFKDLIVCIPNRAAWKPGGD*VGSWAG
Trigger: ACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTT...CCAGGCAGCCCTGTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp GGTCCAGCCCAGTGCTTGGCACAAACGTGGTCTCGGCAGTGCTGCATCCCTGGCTGCAGACAACCTTTATaGGATGAAGCCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: GPAQCLAQTWSRQCCIPGCRQPL*DEATRT
Trigger: GGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCA...GCCAGGGATGCAGCACTGCCGAGACCACGTTTGTGCCAAGCACTGGGCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTAAAAATTACGCTTCATaGGGGCCTCCTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPKNYAS*GPPCGR
Trigger: TCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTT...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTGGACCCGGGCTCCCCAACACATAGAAACTaGGGGCGGGCTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: NSGPGNPFLQLAEVDPGSPTHRN*GRAWAP
Trigger: AGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGG...GGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578537.1
CDS-3UTR TCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGCAGAAGGATCACTTaGGCTCAGGAGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCGRRIT*AQEVEI
Trigger: GATCTCCACCTCCTGAGCTCAAGTGATCCTTCTGCC...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCGCTTACTCCTTACCCTaGCATCCCGCTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSAYSLP*HPAGGE
Trigger: CTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAAGC...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCTCCACGACAGGTGGCTaGAGCATGGGAGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPSTTGG*SMGDAG
Trigger: ACCAGCGTCTCCCATGCTGCAGCCACCTGTCGTGGA...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGCCCAGGCCTGGTATaGACTACTGCTCCACGACAG +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGPGLV*TTAPRQ
Trigger: CTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGGGCCCAGGCCTGGTATaGACTACTGCTCCACGACAG +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALGPGLV*TTAPRQ
Trigger: CTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCC...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGATCTTGTCCTCCGAGTTaGTGGGCATGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TIGAWGSRESGKGALHTGSCPPS*WAWGVA
Trigger: AGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGA...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCCATTCCGAACAGGGCTaGCTGGCGGAGCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAHSEQG*LAELED
Trigger: ATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATG...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGGTCCAGGAAGGGAAGCTaGTTCTCACGTCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GLEWGLTTLQKFSQVDVGSRKGS*FSRPSL
Trigger: TAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGA...CCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGGACAGTGAGGCAGGATaGACAGCCAGCCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQDSEAG*TASQLQ
Trigger: CTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTC...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLACECR*LVPIRG
Trigger: TCCTCTGATTGGGACAAGGCACCTGCATTCACAGGC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGTCCTCACCTGCCCCTaGTTGTGCCTGGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGVLTCP*LCLALA
Trigger: GGCAAGTGCCAGGCACAAGCAGGGGCAGGTGAGGAC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCGAGAGGTTTGGAGGGTaGCGACTGGATCATCCCATC +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPERFGG*RLDHPI
Trigger: GATGGGATGATCCAGTCGGCACCCTCCAAACCTCTC...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp GGAGGGTGCCGACTGGATCATCCCATCCTGGAGAGAAATATGGTCAGTATGCTGTTGCCCAGGCTGGGATaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGCRLDHPILERNMVSMLLPRLG*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCATCCCAGCCTGGGCAA...CAGCATACTGACCATATTTCTCTCCAGGATGGGATGATCCAGTCGGCACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCCAGGTGGCTGCAGCATaGGAGACGCTGGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELQVAAA*ETLVSL
Trigger: AAGACTCACCAGCGTCTCCCATGCTGCAGCCACCTG...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGCAGGAAGCACTCTCTaGGTAGAGGACAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCAGSTL*VEDRDR
Trigger: CCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGC...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGGCAGGACGGGAGGACTGACTaGTCATCCAAACATGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEWGLTTLQKFSQVDVGQDGRTD*SSKHAG
Trigger: GCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTC...CTGCCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGCCGAGTTGCTGGGCATaGGGAGTGGCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGPSCWA*GVAWGQ
Trigger: CTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGG...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGGCAGCCTATCAGCCGTaGGTCACTGAGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQAAYQP*VTEGLR
Trigger: TCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGC...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGATGAGGGCCTCCTTGTaGCAGAGCAAGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRMRASL*QSKKSR
Trigger: CCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCAT...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGGCTAGTACAAAGTGTCCAGAGGAACATGGTCATGGGCTCGTCAACCCTGTACCCTCCTTCCTCTaGGTGCCCCCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGASTKCPEEHGHGLVNPVPSFL*VPPSQL
Trigger: GAGCTGGCTTGGGGGCACCCAGAGGAAGGAGGGTAC...AGGGTTGACGAGCCCATGACCATGTTCCTCTGGACACTTTGTACTAGCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp ATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGAGAGTCCAGTTGTCCTaGACAGTGAGGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: ICLRPGPWETYRANRSLGRVQLS*TVRQDA
Trigger: TGCATCCTGCCTCACTGTCCAGGACAACTGGACTCT...CCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGTCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLSHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTTCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCSHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCGGATCCCCAGAGAGCTaGAGTACTCTGACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAGSPES*STLTLG
Trigger: TCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCC...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGGGAGTTCCTAGGAGGTaGACAACTAGGAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLGVPRR*TTRSQE
Trigger: CTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCC...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTAAGCCTGATGATGGCCTaGCTTATAGCTGTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: VGQVEPRRVHFPCRQMLVSLMMA*LIAVCV
Trigger: TACGCAGACAGCTATAAGCCAGGCCATCATCAGGCT...TACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp ATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACCTTGAGCTCAGGAGGTaGAGATCAGCCTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: MAWLIAVCVGQVEPRRVHLELRR*RSAWQH
Trigger: ATGTTGCCAGGCTGATCTCCACCTCCTGAGCTCAAG...GTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGCGATCTCATGGGAGTaGCAGCTTGACTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLAISWE*QLDSAG
Trigger: TCCTGCAGAGTCAAGCTGCCACTCCCATGAGATCGC...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGACAAACATGCTGGCGCTaGCCACGGATCTTGGACACT +
Preference number: 4 (lower is better)
Translates to: TIGAWGSRESGKGALHTGQTCWR*PRILDT
Trigger: AGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTG...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCAGGGGAAGTCCTAACTaGCGTTCCCACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCRGSPN*RSHTSC
Trigger: GCAGCTGGTGTGGGAACGTCAGTTAGGACTTCCCCT...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACTCAGCCGTGGGTCACTaGGGGGTTGAGAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANSAVGH*GVESAW
Trigger: CCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGA...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGCAGGACAATCGGTCAGCCGTGGGTCACTaGGGGGTTGAGAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IPRELEYSDSRIERQDNRSAVGH*GVESAW
Trigger: CCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGA...CCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSLSTIN*NLSART
Trigger: GGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAG...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGCCTGGAATGGGGACTaGCCACCCTGCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQAWNGD*PPCRSS
Trigger: TGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCTCTAGAGTTCCTAGATaGGAGGTTTGGAGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPSRVPR*EVWRVP
Trigger: CGGCACCCTCCAAACCTCTCATCTAGGAACTCTAGA...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCCTGGTATGCACTACTaGTCCACGACAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCPGMHY*STTGGC
Trigger: GCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGGAACTGGTGGTGTCTCAGCACATGGGGACACAGCTTGCAGGCCAGCTCCTCCTCCAGTTCCAGCTCCTaGACACATTCTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RNWWCLSTWGHSLQASSSSSSSS*THSGFS
Trigger: GCTGAAACCAGAATGTGTGCAGGAGCTGGAACTGGA...GGAGGAGCTGGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp TCGTCAACCCTGGCTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGCATTCCGAACAGGGCTaGCTGGCGGAGCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SSTLAEDSSWAPGPANCKHSEQG*LAELED
Trigger: ATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATG...CTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGCCAGGGTTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCAAGGATCTCATTGTGTaGATTCCGAACAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLKDLIV*IPNRAA
Trigger: GGCAGCCCTGTTCGGAATGCACACAATGAGATCCTT...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGAGCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLEPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGCTC...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449476.7
CDS-3UTR GCA 90 bp CGTCCCTCTCTACGATCAACTGAAACCTCTCTGCCCGCACCAGGCAGCCTATCATTGGGCTCCAGGCCCTaGAAACTGCAAGACCACTCT +
Preference number: 4 (lower is better)
Translates to: RPSLRSTETSLPAPGSLSLGSRP*KLQDHS
Trigger: AGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAA...TGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGAGGGCCGCCTGTGAATaGAGGTGCCTTGTCCCAATC +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWRAACE*RCLVPI
Trigger: GATTGGGACAAGGCACCTGCATTCACAGGCGGCCCT...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTTGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCCSLSS*DKVRTQ
Trigger: CTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACA...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCACCAGAGGGCTTCATTaGAGGTCAATAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPTRGLH*RSIGLS
Trigger: TGACAGGCCTATTGACCTGCAATGAAGCCCTCTGGT...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTTATCGATCAAGGATCTaGCTTAGGCCAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCYRSRI*LRPGPW
Trigger: CCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp ATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTCCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 4 (lower is better)
Translates to: MAWLIAVCVGQVEPRRVHFPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAA...GTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR GCA 90 bp TTACTCCTTACCCTGACATCCCGCTGGTGGAGAGGGATGGAGGTAACTGCAAGTTGGTCTCGGCAGTGCTaGATCCCTGGCTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTLTSRWWRGMEVTASWSRQC*IPGLTW
Trigger: CCAGGTCAAGCCAGGGATGCAGCACTGCCGAGACCA...ACTTGCAGTTACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAATCTTGGGCCCAGGCCTaGTATGCACTACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQSWAQA*YALLLH
Trigger: GTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGA...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTACAGGGGGTTCCCATTTaGTCCAGCCTCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILQGVPI*SSLLGP
Trigger: TGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTG...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TCGTCAACCCTGGCTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGCTGAGGAATTCCACCTaGCAGGAGGGAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: SSTLAEDSSWAPGPANCKLRNST*QEGGNS
Trigger: GGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAG...CTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGCCAGGGTTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTGCAGGAAGCACTCTCTaGGTAGAGGACAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: TQVGLQALQTARPLCLALAGSTL*VEDRDR
Trigger: CCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGC...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCCCGGACAAGACTTTCTaGATCCTTCTTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPPDKTF*ILLVLR
Trigger: TCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGG...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAACTGGCCTGCTGCTTCTaGATGAAGCCTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQLACCF*MKPGML
Trigger: GAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAG...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGVPLGR*DLSEVL
Trigger: CAACACCTCAGACAGATCCCACCGGCCCAGAGGGAC...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAAACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTGGACCCGGGCTGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KTQDLETLFSNWLKWTRAVPLGR*DLSEVL
Trigger: CAACACCTCAGACAGATCCCACCGGCCCAGAGGGAC...AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578537.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGTCCCTCTGGGCCGGTaGGATCTGTCTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGVPLGR*DLSEVL
Trigger: CAACACCTCAGACAGATCCCACCGGCCCAGAGGGAC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TACCCTCAGGCCAGATTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTCGGCTCTGTCCTAGGTaGGGTCCCTCTGGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: YPQARLDSTSPCSYSAVSRLCPR*GPSGPV
Trigger: CACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCG...ACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAATCTGGCCTGAGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGCTCTGGACTTGCTCCTaGGGGGACACAAAAATTACG +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLLWTCS*GDTKIT
Trigger: CGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAG...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTGAAGACTTGTCGTCATTTCCCTaGGGCTCGGGCAGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PADAGTISTHPEELKAEDLSSFP*GSGSPH
Trigger: ATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAA...GTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCTTGTCGTCATTTCCCTaGGGCTCGGGCAGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFLSSFP*GSGSPH
Trigger: ATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAA...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CGTCCCTCTCTACGATCAACTGAAACCTCTCTGCCCGCACCAGGCAGCCTATCAAGAGGAACATGGTCATaGGCTCGTCAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RPSLRSTETSLPAPGSLSRGTWS*ARQPWL
Trigger: CAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCT...TGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CGTCCCTCTCTACGATCAACTGAAACCTCTCTGCCCGCACCAGGCAGCCTATCAGTGTCCAGAGGAACATaGTCATGGGCTCGTCAACCC +
Preference number: 4 (lower is better)
Translates to: RPSLRSTETSLPAPGSLSVSRGT*SWARQP
Trigger: GGGTTGACGAGCCCATGACCATGTTCCTCTGGACAC...TGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGGAGCTCTCCACACTaGAATCGCTGTAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGSSPH*NRCSRG
Trigger: TCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCGGAGTTCCTAGGAGGTaGACAACTAGGAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPGVPRR*TTRSQE
Trigger: CTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCC...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGCTGCCACATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTGGAGTTCCTAGGAGGTaGACAACTAGGAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPHGDSYRSPRLRQSHPGVPRR*TTRSQE
Trigger: CTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCC...AGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATGTGGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCATCACTTTCCACCTTTaGCCCTGGCGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELITFHL*PWRQRA
Trigger: AGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGAT...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGTTACCAGAAGGCAACTaGCTCCGGGTAGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLLPEGN*LRVETS
Trigger: GGAAGTTTCTACCCGGAGCCAGTTGCCTTCTGGTAA...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGGCGGACAAGACTTTCTaGATCCTTCTTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLADKTF*ILLVLR
Trigger: TCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGC...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCTGACATCCCGCTGGTaGAGAGGGATGGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRLTSRW*RGMEVT
Trigger: AGTTACCTCCATCCCTCTCCACCAGCGGGATGTCAG...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTAACCCTGACATCCCGCTaGTGGAGAGGGATGGAGGTA +
Preference number: 4 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLTLTSR*WRGMEV
Trigger: TACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGT...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTTTTTGGATGAAGACCTaGGCATCCTCAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCFWMKT*ASSSQA
Trigger: AGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAA...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCCATGGGAGACGCTGGTaGGTCTTGAGGTCCTGTACT +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPHGRRW*VLRSCT
Trigger: AGTACAGGACCTCAAGACTCACCAGCGTCTCCCATG...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAACATGGGAGACGCTGGTaGGTCTTGAGGTCCTGTACT +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQHGRRW*VLRSCT
Trigger: AGTACAGGACCTCAAGACTCACCAGCGTCTCCCATG...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGAAAGGTCCAGGTCTATaGGCTCACAGCTCAGGACGC +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALKGPGL*AHSSGR
Trigger: GCGTCCTGAGCTGTGAGCTCATAGACCTGGACCTTT...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGAGGGGAAGTCCTAACTaGCGTTCCCACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERRGSPN*RSHTSC
Trigger: GCAGCTGGTGTGGGAACGTCAGTTAGGACTTCCCCT...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTTCTGGAGGGGACAGTaGTGTGGCTCTTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQFWRGQ*CGSSRI
Trigger: GATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAA...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCTGCAGACAACCTTTATaGGATGAAGCCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLCRQPL*DEATRT
Trigger: GGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCA...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTGATGTGGCTCTTCAAGGATCTCATTGTGTGCATTCCGAACAGGGCTGCCTGGCCTGCTGCTTCTGGATaGAGCCTGGCATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VMWLFKDLIVCIPNRAAWPAASG*SLACSA
Trigger: AGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGG...CCAGGCAGCCCTGTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp GGAGGGTGCCGACTGGATCATCCCATCCTGGAGAGAAATATGGTCAGTATGCTGAGTTGTCCTGGACAGTaGGGCAGGATGCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGCRLDHPILERNMVSMLSCPGQ*GRMHSQ
Trigger: CTGGCTGTGCATCCTGCCTCACTGTCCAGGACAACT...CAGCATACTGACCATATTTCTCTCCAGGATGGGATGATCCAGTCGGCACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCGCCTGGAATGGGGACTaGCCACCCTGCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFAWNGD*PPCRSS
Trigger: TGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGC...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERAAATW*FLQVTT
Trigger: CGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGC...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGTGGAGTAGCAGTTTGTaGATCTGGAGTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLWSSSL*IWSPWF
Trigger: GAACCAAGGACTCCAGATTCACAAACTGCTACTCCA...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCAGTACCAGTGAGAAATaGCACCAGAGGGCTTCATTG +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPSTSEK*HQRASL
Trigger: CAATGAAGCCCTCTGGTGTCATTTCTCACTGGTACT...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCCTGGCGGCAAAGGGCTaGAATGATGATGAACGACTA +
Preference number: 4 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAALAAKG*NDDERL
Trigger: TAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAG...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCCTCGTCAACCCTGGCTaGAGACTGCCGGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSLVNPG*RLPADA
Trigger: AGCATCTGCCGGCAGTCTTCAGCCAGGGTTGACGAG...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581729.1
CDS-3UTR GCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGTCCCACAGCTCCAAGTaGCCTTCCCCTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALSHSSK*PSPEEF
Trigger: GAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGA...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCAGCTGGGCAGGGACCTaGACGATGATGGACACGTGG +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSSWAGT*TMMDTW
Trigger: CCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCT...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGTCTTGTCCTCCGAGTTaGTGGGCATGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGSCPPS*WAWGVA
Trigger: AGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGA...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGCAACTGAAACCTCTCTaGCCGCACCAGGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWQLKPL*PHQAAY
Trigger: ATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTG...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGGAGGACGCCGAGATATaGAGGATGAACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLEDAEI*RMNHPF
Trigger: AAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTC...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGCTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLLSGHP*SSVNRR
Trigger: CCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAG...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTCTGTTGCCACAATTTTaGCAAGGCAGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TQVGLQALQTARPLCLALLLPQF*QGRLAP
Trigger: TGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCATAGCTATGCTCTCTaGCTTGCCGCCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCHSYAL*LAANSP
Trigger: TGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTTATCGATCAAGGATCTaGCTTAGGCCAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TQVGLQALQTARPLCLALYRSRI*LRPGPW
Trigger: CCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGTCCCCAGTAAAGAAATaGAGCAACACCAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLSPVKK*SNTSQR
Trigger: CCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGA...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGCCAGCCAGGTTTCGCTaGACACCTCTGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQPARFR*TPLSLF
Trigger: AAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGG...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCATTCCTTTCACCCGGGTaGCCAGAGACTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSFLSPG*PETPPS
Trigger: GGAGGGAGGAGTCTCTGGGCACCCGGGTGAAAGGAA...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCACGATGATGGACACGTaGGTGACAGCTGGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSTMMDT*VTAGCD
Trigger: ATCACACCCAGCTGTCACCCACGTGTCCATCATCGT...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCTGGTGTCTCAGCACATaGGGACACAGCTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFWCLST*GHSLQA
Trigger: GGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCA...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGTGGTGTCTCAGCACATaGGGACACAGCTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGWCLST*GHSLQA
Trigger: GGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCA...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTTGCAGTCCCAGGCTaGGGCTCCCAGGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSVAVPG*GSQERN
Trigger: ATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAAC...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPEGTVM*LFKDLI
Trigger: AATGAGATCCTTGAAGAGCCACATCACTGTCCCCTC...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCACAAGGGGTTCACATAGTGTCCGTGACAAAATCTCAGCGGAGAAAGACACCAGGGGTTGAGAGTGCTTaGCCAGGAGCAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PQGVHIVSVTKSQRRKTPGVESA*PGAGRA
Trigger: TGCCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCC...TGGTGTCTTTCTCCGCTGAGATTTTGTCACGGACACTATGTGAACCCCTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCGGGGTTGAGAGTGCTTaGCCAGGAGCAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCAGVESA*PGAGRA
Trigger: TGCCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCC...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTATGAGGGCCTCCTTGTaGCAGAGCAAGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTMRASL*QSKKSR
Trigger: CCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCAT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATGGCCCCCGATGAGGGCCTCCTTGTaGCAGAGCAAGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: IQQSQERLLASHTFSWPPMRASL*QSKKSR
Trigger: CCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCAT...CGGGGGCCATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp AGAGGGGCTAGTACAAAGTGTCCAGAGGAACATGGTCATGGGCTCGTCAACCCTATGAGGGCCTCCTTGTaGCAGAGCAAGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RGASTKCPEEHGHGLVNPMRASL*QSKKSR
Trigger: CCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCAT...AGGGTTGACGAGCCCATGACCATGTTCCTCTGGACACTTTGTACTAGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAGGGCATCAGCCAGAAAGAACTGGACATAGACTCTGGCCTGCTGCTTCTGGATTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QGISQKELDIDSGLLLLDSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...ATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGAACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TIGAWGSRESGKGALHTGTLPGT*TKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGT...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGTGGGCTCGTCAACCCTaGCTGAAGACTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWWARQP*LKTQVG
Trigger: CCCAACTTGAGTCTTCAGCCAGGGTTGACGAGCCCA...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCGGGAGCTCTCCACACTaGAATCGCTGTAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFGSSPH*NRCSRG
Trigger: TCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCC...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WLKWTRAPGSSPSEGGKCFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGGGGCTAACCGTAGCCTaGGGCCCTATAGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGGLTVA*GPIAQS
Trigger: TGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCC...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWLRPGP*ETYRAN
Trigger: GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAG...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGAGCCTGATGATGGCCTaGCTTATAGCTGTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLSLMMA*LIAVCV
Trigger: TACGCAGACAGCTATAAGCCAGGCCATCATCAGGCT...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGTCCAGCCCAGTGCTTaGCACAAACGTGGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSVQPSA*HKRGLG
Trigger: GCCGAGACCACGTTTGTGCCAAGCACTGGGCTGGAC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCTTTTGGATGAAGACCTaGGCATCCTCAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSFWMKT*ASSSQA
Trigger: AGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAA...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAGACGCTGGTGAGTCTTaGGGTCCTGTACTGAGACGA +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILDAGES*GPVLRR
Trigger: TCGTCTCAGTACAGGACCTCAAGACTCACCAGCGTC...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGGACGCTGGTGAGTCTTaGGGTCCTGTACTGAGACGA +
Preference number: 4 (lower is better)
Translates to: SALSLPADAGTISTHPEEDAGES*GPVLRR
Trigger: TCGTCTCAGTACAGGACCTCAAGACTCACCAGCGTC...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATGGTGACAGCTGGGTGTaGTCTGAGCCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNGDSWV*SEPEQA
Trigger: TGCCTGCTCAGGCTCAGATCACACCCAGCTGTCACC...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449476.7
CDS-3UTR TCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCAACAGACGGGAGGACTaGCTGGTCATCCAAACATGC +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCNRRED*LVIQTC
Trigger: GCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTT...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGLSTIN*NLSART
Trigger: GGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAG...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGAGGGTGTTGCTGAATaGAGGCAGGGTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSEGVAE*RQGLGT
Trigger: TGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCACCAACACATAGAAACTaGGGGCGGGCTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSPTHRN*GRAWAP
Trigger: AGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGG...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAGTTGTCCTGGACAGTaGGGCAGGATGCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRSCPGQ*GRMHSQ
Trigger: CTGGCTGTGCATCCTGCCTCACTGTCCAGGACAACT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCAGTTGTCCTGGACAGTaGGGCAGGATGCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSSCPGQ*GRMHSQ
Trigger: CTGGCTGTGCATCCTGCCTCACTGTCCAGGACAACT...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCATTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSAAATW*FLQVTT
Trigger: CGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGAGTACCAGTGAGAAATaGCACCAGAGGGCTTCATTG +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLSTSEK*HQRASL
Trigger: CAATGAAGCCCTCTGGTGTCATTTCTCACTGGTACT...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGACTGGCGGCAAAGGGCTaGAATGATGATGAACGACTA +
Preference number: 4 (lower is better)
Translates to: TIGAWGSRESGKGALHTGLAAKG*NDDERL
Trigger: TAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAG...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp CAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAAGAGGCTTCCGTTCCTaGACTCTTGTTCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QASALSLPADAGTISTHPRGFRS*TLVPSL
Trigger: CAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCT...TGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGTCCCACAGCTCCAAGTaGCCTTCCCCTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGSHSSK*PSPEEF
Trigger: GAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGA...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GGAATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCACGTTCCCACACCAGCTaGTCGTACAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GIHIQQSQERLLASHTFSRSHTS*SYREAP
Trigger: CGGGGCCTCCCTGTACGAGCAGCTGGTGTGGGAACG...TGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCGTTCCCACACCAGCTaGTCGTACAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVRSHTS*SYREAP
Trigger: CGGGGCCTCCCTGTACGAGCAGCTGGTGTGGGAACG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TTACTCCTTACCCTGACATCCCGCTGGTGGAGAGGGATGGAGGTAACTGCAAGTCATTCCGAACAGGGCTaGCTGGCGGAGCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LLLTLTSRWWRGMEVTASHSEQG*LAELED
Trigger: ATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATG...ACTTGCAGTTACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGTACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: SALSLPADAGTISTHPEEYTCPG*KNSNQR
Trigger: CCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTA...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR GCA 90 bp AGTGGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGACTGCAAGACCACTCTaGCTGGCACTTGGACGAAAT +
Preference number: 4 (lower is better)
Translates to: SGLEWGLTTLQKFSQVDVTARPL*LALGRN
Trigger: ATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGT...CACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGAAGGGCCGCCTGTGAATaGAGGTGCCTTGTCCCAATC +
Preference number: 4 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGRAACE*RCLVPI
Trigger: GATTGGGACAAGGCACCTGCATTCACAGGCGGCCCT...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGACCAGAGGGCTTCATTaGAGGTCAATAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQTRGLH*RSIGLS
Trigger: TGACAGGCCTATTGACCTGCAATGAAGCCCTCTGGT...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGCTATGCTCTCTGCCTTaGCGCCAACTCCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: LKTQVGLQALQTARPLCLLCSLP*RQLPNL
Trigger: TAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAG...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp AGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGTCCCCAGTAAAGAAATaGAGCAACACCAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RICLRPGPWETYRANRSLSPVKK*SNTSQR
Trigger: CCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGA...CAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGCCTTCTGCACCCTGCTaGACGAAACCTGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVLTVPLVLKGERALFIWPSAPC*TKPGAR
Trigger: CCTGGCACCAGGTTTCGTGCAGCAGGGTGCAGAAGG...CCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp GGAGGGTGCCGACTGGATCATCCCATCCTGGAGAGAAATATGGTCAGTATGCTGAGTGCTCCAGAAAAGTaGCCTGCCCTTCCACACCAG +
Preference number: 4 (lower is better)
Translates to: GGCRLDHPILERNMVSMLSAPEK*PALPHQ
Trigger: CTGGTGTGGAAGGGCAGGGCACTTTTCTGGAGCACT...CAGCATACTGACCATATTTCTCTCCAGGATGGGATGATCCAGTCGGCACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCTTGGTTCCTTCCCTaGGACAACCAGACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALPWFLP*DNQTVF
Trigger: GAAGACTGTCTGGTTGTCCCAGGGAAGGAACCAAGG...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGTCTTGGGCCCAGGCCTaGTATGCACTACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRSWAQA*YALLLH
Trigger: GTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGA...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGGCAGGGAACCACTTTaGTCCCGAAGTTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWGREPL*SRSCRQ
Trigger: TTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCC...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGCAGCCTATCAGCCGTaGGTCACTGAGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSAAYQP*VTEGLR
Trigger: TCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAGCAGCCTATCAGCCGTaGGTCACTGAGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRREAAYQP*VTEGLR
Trigger: TCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGC...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGACTGGCCTGCTGCTTCTaGATGAAGCCTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGLACCF*MKPGML
Trigger: GAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAG...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCACTCTGGACTTGCTCCTaGGGGGACACAAAAATTACG +
Preference number: 4 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRALWTCS*GDTKIT
Trigger: CGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAG...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGACATCTTGGATATCCTaGGAGCTTTCAAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLTSWIS*ELSSSR
Trigger: TCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGT...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGTCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SALSLPADAGTISTHPEESHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTATCACACACCTTCTCATaGCCCCCGTGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILSHTFS*PPCSPV
Trigger: AACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGA...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCCTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANPAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGG...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAAACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTGGACCCGGGCTCCTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: KTQDLETLFSNWLKWTRAPAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGG...AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578537.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGCCTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGPAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGG...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPTLPGT*TKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGT...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGCTGAAGACTCAAGTTaGGCTCCAGGCCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGAEDSS*APGPAN
Trigger: GTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACGTGTCCAGAGGAACATaGTCATGGGCTCGTCAACCC +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANVSRGT*SWARQP
Trigger: GGGTTGACGAGCCCATGACCATGTTCCTCTGGACAC...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTAGGACAATCGGAGCCTaGGGTTCACGTGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTRTIGA*GSRESG
Trigger: TCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACAGGACAATCGGAGCCTaGGGTTCACGTGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANRTIGA*GSRESG
Trigger: TCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCT...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGGGCTAACCGTAGCCTaGGGCCCTATAGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSGLTVA*GPIAQS
Trigger: TGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCGGAGCACCTTCTaGTCTCAAGGTATATCGATC +
Preference number: 4 (lower is better)
Translates to: MAWLIAVCVGQVEPRRVHFRSTF*SQGISI
Trigger: GATCGATATACCTTGAGACCAGAAGGTGCTCCGAAA...GTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCTCTTACATTGGTTCGTaGGCCATGGAATGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPSYIGS*AMEWCR
Trigger: TCGACACCATTCCATGGCCCACGAACCAATGTAAGA...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGGCGCCCGGCCATACATaGCAAGTTTCTACATGGTGT +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALAPGHT*QVSTWC
Trigger: ACACCATGTAGAAACTTGCCATGTATGGCCGGGCGC...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCATCTTGTTGCCCAGGCTaGGATGCAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSSCCPG*DAVARS
Trigger: AGATCGCGCCACTGCATCCCAGCCTGGGCAACAAGA...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CAA 72 bp CTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTaGTTCATTTGGTTCTGCACAGGGTCCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LTVPLVLKGERA*FIWFCTGSSPV
Trigger: CACTGGGCTGGACCCTGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTCATGGGAGACGCTGGTaGGTCTTGAGGTCCTGTACT +
Preference number: 4 (lower is better)
Translates to: RPSGFQQGRTLRPSLQFSHGRRW*VLRSCT
Trigger: AGTACAGGACCTCAAGACTCACCAGCGTCTCCCATG...ACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp TACCCTCAGGCCAGATTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTCAAGTGCCCTTCCCCTaGGGAATTCCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: YPQARLDSTSPCSYSAVSQVPFP*GIPPGR
Trigger: CCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTG...ACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAATCTGGCCTGAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AGAGGGGCTAGTACAAAGTGTCCAGAGGAACATGGTCATGGGCTCGTCAACCCTTTCTGGAGGGGACAGTaGTGTGGCTCTTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: RGASTKCPEEHGHGLVNPFWRGQ*CGSSRI
Trigger: GATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAA...AGGGTTGACGAGCCCATGACCATGTTCCTCTGGACACTTTGTACTAGCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCCCGGTGGGATCTGTCTaGGGTGTTGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCAPVGSV*GVEGVA
Trigger: AGCAACACCCTCAACACCTCAGACAGATCCCACCGG...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGTGGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGAAAAATTACGCTTCATaGGGGCCTCCTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLEWGLTTLQKFSQVDVKNYAS*GPPCGR
Trigger: TCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTT...CACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp GCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTTACCAACACATAGAAACTaGGGGCGGGCTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AFRFSARKDSQAILAVQLPTHRN*GRAWAP
Trigger: AGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGG...TAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp CAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCACTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: QASALSLPADAGTISTHPLKPAD*RAKENE
Trigger: CTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAG...TGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNFSPTG*SGPGLL
Trigger: CAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAA...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTGGAGTAGCAGTTTGTaGATCTGGAGTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELWSSSL*IWSPWF
Trigger: GAACCAAGGACTCCAGATTCACAAACTGCTACTCCA...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGAGAGATGAGTACCAGTaGGAAATGACACCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALRDEYQ*EMTPEG
Trigger: GCCCTCTGGTGTCATTTCTCACTGGTACTCATCTCT...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGCTGGGACCCCAGAGATaGGTACCAGTGAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERLGPQR*VPVRND
Trigger: GTCATTTCTCACTGGTACTCATCTCTGGGGTCCCAG...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAACCCAGCCTTACTGACTaGGACCATCATAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQPSLTD*DHHSYA
Trigger: AGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGG...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGGTGACAGCTGGGTGTaGTCTACCAAGAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGGDSWV*STKRQD
Trigger: ATCCTGTCTCTTGGTAGATCACACCCAGCTGTCACC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTCGCGGCGGTTGCACGTaGACCTTCCTTTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPRGGCT*TFLSPG
Trigger: CCCGGGTGAAAGGAAGGTTCACGTGCAACCGCCGCG...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTGTTTCAGACTTAGCTaGTCACCCTCTACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCCFRLS*SPSTLR
Trigger: CCTGAGGGTAGAGGGTGATCAGCTAAGTCTGAAACA...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGAGGCTTCCGTTCCTaGACTCTTGTTCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPRGFRS*TLVPSL
Trigger: CAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCT...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGTCCAGTTCCAGCTCCTaGACACATTCTGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWSSSSS*THSGFS
Trigger: GCTGAAACCAGAATGTGTGCAGGAGCTGGAACTGGA...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTCGTTCCCACACCAGCTaGTCGTACAGGGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSRSHTS*SYREAP
Trigger: CGGGGCCTCCCTGTACGAGCAGCTGGTGTGGGAACG...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAATACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRREYTCPG*KNSNQR
Trigger: CCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTA...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCCTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCLSGHP*SSVNRR
Trigger: CCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAG...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTCCACCAGGAGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HGDSYRSPRLRQSHPPPGAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...TCCTGGTGGAGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGCATAGCTATGCTCTCTaGCTTGCCGCCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRHSYAL*LAANSP
Trigger: TGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATG...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTACCTGCCCCTGCTTGTaGCTGGCACTTGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPTCPCL*LALASP
Trigger: GGGGGAGGCAAGTGCCAGGCACAAGCAGGGGCAGGT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGTTCCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWFPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAA...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCCAGCCAGGTTTCGCTaGACACCTCTGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SALSLPADAGTISTHPEEPARFR*TPLSLF
Trigger: AAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGG...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGGGCCAGCCGGATCCCTaGTTACTCCTTACCCTGACA +
Preference number: 4 (lower is better)
Translates to: PVLTVPLVLKGERALFIWGQPDP*LLLTLT
Trigger: TGTCAGGGTAAGGAGTAAGCAGGGATCCGGCTGGCC...CCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCTTGTTCATTTGGTTCTaGACAGGGTCCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPLFIWF*TGSSPV
Trigger: CACTGGGCTGGACCCTGTGCAGAACCAAATGAACAA...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTGGCAGTGTAGAACCTTaGTTCCTTCCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAGSVEP*FLPWDN
Trigger: GTTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCC...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGGGCAGTGTAGAACCTTaGTTCCTTCCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERGSVEP*FLPWDN
Trigger: GTTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCC...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGGCTGACCACGGATCTTaGACACTCGCAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SALSLPADAGTISTHPEEADHGS*TLAVLS
Trigger: TGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGC...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCCGAGTTGCTGGGCATaGGGAGTGGCTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVPSCWA*GVAWGQ
Trigger: CTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTAGAGTCCAGTTGTCCTaGACAGTGAGGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTRVQLS*TVRQDA
Trigger: TGCATCCTGCCTCACTGTCCAGGACAACTGGACTCT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTGCATCCAGCACATCTTaGATATCCTGGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQVGLQALQTARPLCLALASSTS*ISWELS
Trigger: TGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGC...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGGCATCCAGCACATCTTaGATATCCTGGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQASSTS*ISWELS
Trigger: TGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGC...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRTLFSN*LKWTRA
Trigger: AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GCACATCTTGGATATCCTGGGAGCTTTCAAGCTCCAGAGTCCAGTTGTCCTGGAACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: AHLGYPGSFQAPESSCPGTLFSN*LKWTRA
Trigger: AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGT...TCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp GCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTAAACATTGTGAGATCTaGAAACCCTTTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ALGQALGKPTGLTVAWGPKHCEI*KPFSPT
Trigger: AGTTGGAGAAAAGGGTTTCCAGATCTCACAATGTTT...AGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAGAGGAACATGGTCATaGGCTCGTCAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRRGTWS*ARQPWL
Trigger: CAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGTGTCCAGAGGAACATaGTCATGGGCTCGTCAACCC +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRVSRGT*SWARQP
Trigger: GGGTTGACGAGCCCATGACCATGTTCCTCTGGACAC...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGATCCCCAGAGAGCTaGAGTACTCTGACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRGSPES*STLTLG
Trigger: TCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCC...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTCCACCTGCACCAGTaGGGTGTGGCATCAGTTAAG +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSVHLHQ*GVASVK
Trigger: CTTAACTGATGCCACACCCCACTGGTGCAGGTGGAC...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTGCCTTGTTCATTTaGTTCTGCACAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANRALFI*FCTGSS
Trigger: GCTGGACCCTGTGCAGAACCAAATGAACAAGGCACG...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAACAGACGGGAGGACTaGCTGGTCATCCAAACATGC +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRNRRED*LVIQTC
Trigger: GCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GATGAACGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGTGCAGACAACCTTTATaGGATGAAGCCACCAGAACC +
Preference number: 4 (lower is better)
Translates to: DERLGVPRRWTTRSQEAWCRQPL*DEATRT
Trigger: GGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCA...CCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCGTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNLSTIN*NLSART
Trigger: GGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAG...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATCCTGCTGCTTCTGGATaGAGCCTGGCATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYPAASG*SLACSA
Trigger: AGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGG...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TCAAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGACCAACACATAGAAACTaGGGGCGGGCTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SSHLLILHWFVGHGMVSRPTHRN*GRAWAP
Trigger: AGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGG...TCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp GCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACAGCCTGGAATGGGGACTaGCCACCCTGCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: APGSSPSEGGKCGSSIYTAWNGD*PPCRSS
Trigger: TGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGC...TGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILRAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFRAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGRAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTGCTCAGGGCCGCCTGTaGATGCAGGTGCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLAQGRL*MQVPCP
Trigger: GGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTAGAGATGAGTACCAGTaGGAAATGACACCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTRDEYQ*EMTPEG
Trigger: GCCCTCTGGTGTCATTTCTCACTGGTACTCATCTCT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCCTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPLIVRL*FRSTFW
Trigger: CCAGAAGGTGCTCCGAAATCACAACCGTACAATTAG...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCAAACATCTGCCTCCATaGAAGCGCTTCAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SRICLRPGPWETYRANRSKHLPP*KRFREK
Trigger: TTTTTCCCTGAAGCGCTTTCATGGAGGCAGATGTTT...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGGCTGCATCCCTGGCTTaGCCTGGAGGTAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTAASLA*PGGSNS
Trigger: GGAATTGCTACCTCCAGGTCAAGCCAGGGATGCAGC...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGAGAGGCTTCCGTTCCTaGACTCTTGTTCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERRGFRS*TLVPSL
Trigger: CAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCT...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGAGCTGGGCAGGGACCTaGACGATGATGGACACGTGG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVSWAGT*TMMDTW
Trigger: CCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCT...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCAAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGATCTTGTCCTCCGAGTTaGTGGGCATGGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSHLLILHWFVGHGMVSRSCPPS*WAWGVA
Trigger: AGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGA...TCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCCCAGGAGAGGAATGTTaGAGGAACTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSPGEEC*RNWWCL
Trigger: GAGACACCACCAGTTCCTGCAACATTCCTCTCCTGG...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CAGGGCATCAGCCAGAAAGAACTGGACATAGACTCTGGCCTGCTGCTTCTGGATAAGGATCTCATTGTGTaGATTCCGAACAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGISQKELDIDSGLLLLDKDLIV*IPNRAA
Trigger: GGCAGCCCTGTTCGGAATGCACACAATGAGATCCTT...ATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGTCCAGGAAGGGAAGCTaGTTCTCACGTCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRSRKGS*FSRPSL
Trigger: TAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGA...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTTATACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: AFRFSARKDSQAILAVQLYTCPG*KNSNQR
Trigger: CCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTA...TAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp GCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACAGACAGTGAGGCAGGATaGACAGCCAGCCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: APGSSPSEGGKCGSSIYTDSEAG*TASQLQ
Trigger: CTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTC...TGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp GCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTTATTGGGCTCCAGGCCCTaGAAACTGCAAGACCACTCT +
Preference number: 4 (lower is better)
Translates to: AFRFSARKDSQAILAVQLLGSRP*KLQDHS
Trigger: AGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAA...TAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR GCA 90 bp CAGGGCATCAGCCAGAAAGAACTGGACATAGACTCTGGCCTGCTGCTTCTGGATCTATGCTCTCTGCCTTaGCGCCAACTCCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: QGISQKELDIDSGLLLLDLCSLP*RQLPNL
Trigger: TAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAG...ATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTACTATGCTCTCTGCCTTaGCGCCAACTCCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILLCSLP*RQLPNL
Trigger: TAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAG...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTACCTGCCCCTGCTTGTaGCTGGCACTTGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLITCPCL*LALASP
Trigger: GGGGGAGGCAAGTGCCAGGCACAAGCAGGGGCAGGT...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTTTCCCTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTFPAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAA...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTGGCAGGATTCGAACCTaGGCGGGGAGACCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPGRIRT*AGRPQW
Trigger: CCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCC...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAGGACCCTTAGGCCTATaGAACATTTCTGCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILGPLGL*NISAPK
Trigger: CTTAGGGGCAGAAATGTTGCATAGGCCTAAGGGTCC...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAACGATGATGGACACGTaGGTGACAGCTGGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSTMMDT*VTAGCD
Trigger: ATCACACCCAGCTGTCACCCACGTGTCCATCATCGT...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAGCTGACCACGGATCTTaGACACTCGCAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRREADHGS*TLAVLS
Trigger: TGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGC...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GTTAGAGAACCACCTTTTAGAGTGGCGATCTCATGGGAGTGGCAGCTTGACTCTGACGGGAGGACTGACTaGTCATCCAAACATGCTGGC +
Preference number: 4 (lower is better)
Translates to: VREPPFRVAISWEWQLDSDGRTD*SSKHAG
Trigger: GCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTC...AGAGTCAAGCTGCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTTCTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGCTTCTGGATGAAGCCTaGCATGCTCAGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRLLDEA*HAQLLP
Trigger: TGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAG...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATGGCCCCCGCTCTGGACTTGCTCCTaGGGGGACACAAAAATTACG +
Preference number: 4 (lower is better)
Translates to: IQQSQERLLASHTFSWPPLWTCS*GDTKIT
Trigger: CGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAG...CGGGGGCCATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACAACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: TVPLVLKGERALFIWFCTTLFSN*LKWTRA
Trigger: AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGT...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPGSGLE*GLTTLQ
Trigger: CTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCC...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGCAGTGGCCTGGAATaGGGACTGACCACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSGSGLE*GLTTLQ
Trigger: CTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCC...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAACTCTGCCTGGCACTTaGACGAAATCTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSTLPGT*TKSRRE
Trigger: CTCCCTCCTAGATTTCGTCCAAGTGCCAGGCAGAGT...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAAAGGACAATCGGAGCCTaGGGTTCACGTGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKRTIGA*GSRESG
Trigger: TCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCT...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGTARKK*PPSSSE
Trigger: TTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGT...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTAACCAGCCTAGCTTCAGTGCTCCAGAAAAGTGCCCTGCCCTTCTTGGAGGGTGCCGACTaGATCATCCCATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISSLTSLASVLQKSALPFLEGAD*IIPSWR
Trigger: TCTCCAGGATGGGATGATCCAGTCGGCACCCTCCAA...GAAGGGCAGGGCACTTTTCTGGAGCACTGAAGCTAGGCTGGTTAAGGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAAGAGTGGCGATCTCATaGGAGTGGCAGCTTGACTCT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSRVAIS*EWQLDS
Trigger: AGAGTCAAGCTGCCACTCCCATGAGATCGCCACTCT...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTCTTGAGGTCCTGTACTaGGACGAAGCTATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RPSGFQQGRTLRPSLQFSLEVLY*DEAIAE
Trigger: CTCAGCTATAGCTTCGTCTCAGTACAGGACCTCAAG...ACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCAACAGACGGGAGGACTaGCTGGTCATCCAAACATGC +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCANRRED*LVIQTC
Trigger: GCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCCATTCAACACGCCAGTaGCTGCTCCCGAATAGGATA +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSHSTRQ*LLPNRI
Trigger: TATCCTATTCGGGAGCAGTCACTGGCGTGTTGAATG...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR TCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTAAGCCAGGCGGCGATTaGGTTGGCAGCTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLKPGGD*VGSWAG
Trigger: ACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTT...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGAGGGTGTTGCTGAATaGAGGCAGGGTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGEGVAE*RQGLGT
Trigger: TGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCACCGGTGGGATCTGTCTaGGGTGTTGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPPVGSV*GVEGVA
Trigger: AGCAACACCCTCAACACCTCAGACAGATCCCACCGG...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGAAAAATTACGCTTCATaGGGGCCTCCTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGKNYAS*GPPCGR
Trigger: TCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTT...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANLKPAD*RAKENE
Trigger: CTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAG...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPAAATW*FLQVTT
Trigger: CGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGC...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGCTGCTGCCACATGGTaGTTCCTACAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVAAATW*FLQVTT
Trigger: CGTGGTGACCTGTAGGAATCACCATGTGGCAGCAGC...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAGAGCTGGAGTACTCTaGCTCTCGGATAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRRAGVL*LSDRKA
Trigger: TGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGTGGAGTAGCAGTTTGTaGATCTGGAGTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GPPVNAGALSQSEDILIGWSSSL*IWSPWF
Trigger: GAACCAAGGACTCCAGATTCACAAACTGCTACTCCA...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 4 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAACTGGCGGCAAAGGGCTaGAATGATGATGAACGACTA +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRRELAAKG*NDDERL
Trigger: TAGTCGTTCATCATCATTTCAGCCCTTTGCCGCCAG...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCCCCAGCCTTACTGACTaGGACCATCATAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSPSLTD*DHHSYA
Trigger: AGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGG...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCTTCTTTGTGCTTGTaGACACCTCTAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LQGPALLTETIIAMLSALPSLCL*TPLGIH
Trigger: ATGAATGCCTAGAGGTGTTCACAAGCACAAAGAAGG...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAAGGTGACAGCTGGGTGTaGTCTACCAAGAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKGDSWV*STKRQD
Trigger: ATCCTGTCTCTTGGTAGATCACACCCAGCTGTCACC...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCGAAATGTGGGTGCTATaGGTGCAGAACAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPEMWVL*VQNRNS
Trigger: AGAGTTTCTGTTCTGCACTCATAGCACCCACATTTC...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCCTAGCGACTCCCGAATaGTGCTTTCTTGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSLATPE*CFLGLC
Trigger: ACAGAGTCCAAGAAAGCATCATTCGGGAGTCGCTAG...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTGGCCGAAGGGCTCTGTaGCACACCAGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIGRRAL*HTSWAG
Trigger: CCCTGCCCAGCTGGTGTGGCACAGAGCCCTTCGGCC...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAAGGATCTCATTGTGTaGATTCCGAACAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRKDLIV*IPNRAA
Trigger: GGCAGCCCTGTTCGGAATGCACACAATGAGATCCTT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGCAACTGAAACCTCTCTaGCCGCACCAGGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTQLKPL*PHQAAY
Trigger: ATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTG...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAACTGCAAGACCACTCTaGCTGGCACTTGGACGAAAT +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRRETARPL*LALGRN
Trigger: ATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGT...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAACTGTTGCCACAATTTTaGCAAGGCAGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKLLPQF*QGRLAP
Trigger: TGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNACECR*LVPIRG
Trigger: TCCTCTGATTGGGACAAGGCACCTGCATTCACAGGC...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATATCGATCAAGGATCTaGCTTAGGCCAGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKYRSRI*LRPGPW
Trigger: CCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCCTATGTGGGTGCTATGAGTaGAGAACAGAAACTCTTACG +
Preference number: 4 (lower is better)
Translates to: STCTSGVWHQLSKGPLGLCGCYE*RTETLT
Trigger: CGTAAGAGTTTCTGTTCTGCACTCATAGCACCCACA...TAGGCCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTACGTGGTCTCGGCAGTaGTGCATCCCTGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPTWSRQ*CIPGLT
Trigger: GGTCAAGCCAGGGATGCAGCACTGCCGAGACCACGT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGACAGGGTCCAGCCCAGTaGTTGGCACAAACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGQGPAQ*LAQTWS
Trigger: AGACCACGTTTGTGCCAAGCACTGGGCTGGACCCTG...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCAGGCTCCTTGACAGCTaGACACAGGGTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSRLLDS*TQGLLD
Trigger: ATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCT...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTCTTCCTTAACCAGCCTAGCTTCAGTGCTCCAGAAAAGTGCCCTGCCCTTCCCTTGGTTCCTTCCCTaGGACAACCAGACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISSLTSLASVLQKSALPFPWFLP*DNQTVF
Trigger: GAAGACTGTCTGGTTGTCCCAGGGAAGGAACCAAGG...GAAGGGCAGGGCACTTTTCTGGAGCACTGAAGCTAGGCTGGTTAAGGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp GGAATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCATCTTGGGCCCAGGCCTaGTATGCACTACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GIHIQQSQERLLASHTFSSWAQA*YALLLH
Trigger: GTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGA...TGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp CCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGGCTGACCACGGATCTTaGACACTCGCAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PVLTVPLVLKGERALFIWADHGS*TLAVLS
Trigger: TGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGC...CCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCACCGGACAAGACTTTCTaGATCCTTCTTGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSPDKTF*ILLVLR
Trigger: TCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGG...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGACTGGCCTGCTGCTTCTaGATGAAGCCTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGLACCF*MKPGML
Trigger: GAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAG...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCATCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPSNWLK*TRAPGS
Trigger: ACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGA...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp ATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGAAACATTGTGAGATCTaGAAACCCTTTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ICLRPGPWETYRANRSLGKHCEI*KPFSPT
Trigger: AGTTGGAGAAAAGGGTTTCCAGATCTCACAATGTTT...CCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TACCCTCAGGCCAGATTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAGACTCAAGTTaGGCTCCAGGCCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: YPQARLDSTSPCSYSAVSAEDSS*APGPAN
Trigger: GTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGC...ACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAATCTGGCCTGAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGAGGTTCTAATGGGACGATCTTCGACGGTTTCCTTTCCAGCTCAAAAGAAAGCCTTAGGCCAGGCCCTTaGGAAACCTACAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: GGSNGTIFDGFLSSSKESLRPGP*ETYRAN
Trigger: GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAG...GCTTTCTTTTGAGCTGGAAAGGAAACCGTCGAAGATCGTCCCATTAGAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATACTGCCGGCAGATGCTaGTACAATAAGCACACACCC +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNTAGRC*YNKHTP
Trigger: GGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGT...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581729.1
CDS-3UTR CCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTTGGGCTCGTCAACCCTaGCTGAAGACTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSWARQP*LKTAGR
Trigger: TCTGCCGGCAGTCTTCAGCCAGGGTTGACGAGCCCA...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581729.1
CDS-3UTR CCA 90 bp CTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAAACCACCTTTTAGAGTaGCGATCTCATGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLPQFCQGRLAPEHQRRENHLLE*RSHGSG
Trigger: GCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTT...TTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTGCACCAGTGGGGTGTaGCATCAGTTAAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSCTSGV*HQLSKG
Trigger: TCCTTTGCTTAACTGATGCCACACCCCACTGGTGCA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATTCGTGGGCCATGGAATaGTGTCGAGAGCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYSWAME*CRELSA
Trigger: GGCAGAAAGCTCTCGACACCATTCCATGGCCCACGA...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCTTGGCACAAACGTaGTCTCGGCAGTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTCLAQT*SRQCCI
Trigger: GATGCAGCACTGCCGAGACCACGTTTGTGCCAAGCA...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CAA 72 bp CTGAGCAGGTCGGTCAGTGAGGATTCAGGCAATGACTaGTTTGCATCCAGCACATCTTGGATATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSRSVSEDSGND*FASSTSWISWE
Trigger: CTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAATCCTCACTGACCGACCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCTTTTGGATGAAGACCTaGGCATCCTCAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCAFWMKT*ASSSQA
Trigger: AGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAA...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTACAGGGTCTTTTGGATaGAGACCTGAGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: RPSGFQQGRTLRPSLQFSTGSFG*RPEHPQ
Trigger: TTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGT...ACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAACTTGAGGTCCTGTACTaGGACGAAGCTATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKLEVLY*DEAIAE
Trigger: CTCAGCTATAGCTTCGTCTCAGTACAGGACCTCAAG...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAGGTGAGTTCTGGAGGGGACAGTaGTGTGGCTCTTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: VVLVREASVGLLYIHPGEFWRGQ*CGSSRI
Trigger: GATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAA...CTCACCTGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCAAAAATTACGCTTCATaGGGGCCTCCTTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSKNYAS*GPPCGR
Trigger: TCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTT...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAAAGAGCCAAAGAAAATaGGGTGAACCTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRAKSQRK*GEPSDH
Trigger: ATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTT...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR TCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCCTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSLKPAD*RAKENE
Trigger: CTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAG...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTAGCCTGGGGTTCACGTaGGTCAGGAAAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSSLGFT*VRKGSS
Trigger: AGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCT...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATAGAGATGAGTACCAGTaGGAAATGACACCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNRDEYQ*EMTPEG
Trigger: GCCCTCTGGTGTCATTTCTCACTGGTACTCATCTCT...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACACTGGGACCCCAGAGATaGGTACCAGTGAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: APGSSPSEGGKCGSSIYTLGPQR*VPVRND
Trigger: GTCATTTCTCACTGGTACTCATCTCTGGGGTCCCAG...TGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR TCA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACACCCAGCCTTACTGACTaGGACCATCATAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: TVPLVLKGERALFIWFCTPSLTD*DHHSYA
Trigger: AGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGG...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TCAAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGACTAGGCATTCATATTTaGCTTCCTGCAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSHLLILHWFVGHGMVSRLGIHI*LPAGPS
Trigger: GCTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAG...TCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCCCTTCTTTGTGCTTGTaGACACCTCTAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFPSLCL*TPLGIH
Trigger: ATGAATGCCTAGAGGTGTTCACAAGCACAAAGAAGG...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAACACCAAGGAATCTGTaGAAAGCGGGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPTPRNL*KAGPGA
Trigger: AGCTCCTGGCCCCGCTTTTCACAGATTCCTTGGTGT...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578537.1
CDS-3UTR TCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTACCAAGAGACAGGATaGAGTAAGCTTTCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELYQETG*SKLSVY
Trigger: GTAAACAGAAAGCTTACTTCATCCTGTCTCTTGGTA...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTCCTGGTATGCACTACTaGTCCACGACAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPPGMHY*STTGGC
Trigger: GCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGG...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATCCAGGAGAGGAATGTTaGAGGAACTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYPGEEC*RNWWCL
Trigger: GAGACACCACCAGTTCCTGCAACATTCCTCTCCTGG...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCAACTGAAACCTCTCTaGCCGCACCAGGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVQLKPL*PHQAAY
Trigger: ATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGTACACCTGTCCCGGGTaGAAGAACTCAAACCAGCGG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVYTCPG*KNSNQR
Trigger: CCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTA...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTAGGGCCGCCTGTGAATaGAGGTGCCTTGTCCCAATC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPRAACE*RCLVPI
Trigger: GATTGGGACAAGGCACCTGCATTCACAGGCGGCCCT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCACCAGAGGGCTTCATTaGAGGTCAATAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCATRGLH*RSIGLS
Trigger: TGACAGGCCTATTGACCTGCAATGAAGCCCTCTGGT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCACATAGCTATGCTCTCTaGCTTGCCGCCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPHSYAL*LAANSP
Trigger: TGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATG...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCATGGCTTATAGCTGTCTaGGTAGGGCAAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPWLIAV*VGQVEP
Trigger: GGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCA...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGTGGCTTATAGCTGTCTaGGTAGGGCAAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVWLIAV*VGQVEP
Trigger: GGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCA...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGACAGATCCTATTTCTTaGCTTATCTCTGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: ICLRPGPWETYRANRSLGTDPIS*LISGIY
Trigger: ATAAATGCCAGAGATAAGGCAAGAAATAGGATCTGT...CCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCAGGCTCCTTGACAGCTaGACACAGGGTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCARLLDS*TQGLLD
Trigger: ATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCT...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTACCAATGGAGTCAACTaGACATTAGGCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: RASLLFPQLLRQSQNPGATNGVN*TLGSLT
Trigger: TGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGT...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GTAACTGCAAGTGAAAGACCAGTTAGAGGACCGCATCTGGAAGCTGTGCCAAATGGCAGTGTAGAACCTTaGTTCCTTCCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: VTASERPVRGPHLEAVPNGSVEP*FLPWDN
Trigger: GTTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCC...ATTTGGCACAGCTTCCAGATGCGGTCCTCTAACTGGTCTTTCACTTGCAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGACGGGAGGACTGACTaGTCATCCAAACATGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGDGRTD*SSKHAG
Trigger: GCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTTGTCCTCCGAGTTGCTaGGCATGGGGAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLCPPSC*AWGVAW
Trigger: CCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACA...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSEGTVM*LFKDLI
Trigger: AATGAGATCCTTGAAGAGCCACATCACTGTCCCCTC...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGACCCCAAGTAAAACCTaGGCTGGGCAGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVTPSKT*AGQKAE
Trigger: CTCTGCCTTCTGCCCAGCCCAGGTTTTACTTGGGGT...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000651323.1
CDS-3UTR CCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATCTCTGGACTTGCTCCTaGGGGGACACAAAAATTACG +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNLWTCS*GDTKIT
Trigger: CGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAG...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAGTACCCTCCTTCCTCTaGGTGCCCCCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSVPSFL*VPPSQL
Trigger: GAGCTGGCTTGGGGGCACCCAGAGGAAGGAGGGTAC...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTTTGTCGTCATTTCCCTaGGGCTCGGGCAGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLLSSFP*GSGSPH
Trigger: ATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAA...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGACATCTTGGATATCCTaGGAGCTTTCAAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCCHNFAKAGWHQNTKEGTSWIS*ELSSSR
Trigger: TCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGT...CCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPTLFSN*LKWTRA
Trigger: AGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGT...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGTGGGCTCGTCAACCCTaGCTGAAGACTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVWARQP*LKTQVG
Trigger: CCCAACTTGAGTCTTCAGCCAGGGTTGACGAGCCCA...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTGGGAGCTCTCCACACTaGAATCGCTGTAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPGSSPH*NRCSRG
Trigger: TCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCC...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGGATCCCCAGAGAGCTaGAGTACTCTGACTCTCGGA +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGGSPES*STLTLG
Trigger: TCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAATCACTTTCCACCTTTaGCCCTGGCGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPITFHL*PWRQRA
Trigger: AGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGAT...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CCA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTTACCATTTCTTCTGCTaGACGAAAAGCTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TQVGLQALQTARPLCLALYHFFC*TKSSSL
Trigger: AAGAGAAGAGCTTTTCGTCCAGCAGAAGAAATGGTA...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCACCAGCCAAAGGCATTaGTATCTCCAAAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: RKAGQSEPGVHVSQERELTSQRH*YLQRIV
Trigger: AACAATTCTTTGGAGATACCAATGCCTTTGGCTGGT...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp GCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTTAACAGCCAGGAAGAAATaGCCTCCCAGTAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AFRFSARKDSQAILAVQLTARKK*PPSSSE
Trigger: TTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGT...TAACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp GGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTAGGTGCAATATAATTCTGTTAGTGGAGAAAGAGGCCTaGAAGGTGGGCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GALVIQGIGSSRCNIILLVEKEA*KVGSPF
Trigger: GAAGGGGCTGCCCACCTTCCAGGCCTCTTTCTCCAC...TAACAGAATTATATTGCACCTACTGCTTCCTATTCCCTGAATCACTAGCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAAACAGGGTCTTTTGGATaGAGACCTGAGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKTGSFG*RPEHPQ
Trigger: TTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGT...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GTAACTGCAAGTGAAAGACCAGTTAGAGGACCGCATCTGGAAGCTGTGCCAAATCATTCAACACGCCAGTaGCTGCTCCCGAATAGGATA +
Preference number: 4 (lower is better)
Translates to: VTASERPVRGPHLEAVPNHSTRQ*LLPNRI
Trigger: TATCCTATTCGGGAGCAGTCACTGGCGTGTTGAATG...ATTTGGCACAGCTTCCAGATGCGGTCCTCTAACTGGTCTTTCACTTGCAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAAGAGCCAAAGAAAATaGGGTGAACCTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPKSQRK*GEPSDH
Trigger: ATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTT...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 4 (lower is better)
Translates to: QASALSLPADAGTISTHPILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...TGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCATCCACGACAGGTGGCTaGAGCATGGGAGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSSTTGG*SMGDAG
Trigger: ACCAGCGTCTCCCATGCTGCAGCCACCTGTCGTGGA...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGACCAGGAGAGGAATGTTaGAGGAACTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGPGEEC*RNWWCL
Trigger: GAGACACCACCAGTTCCTGCAACATTCCTCTCCTGG...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATGAGGACGCCGAGATATaGAGGATGAACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNEDAEI*RMNHPF
Trigger: AAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTC...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAGCCTGTGAATGCAGGTaGCTTGTCCCAATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LEVVLVREASVGLLYIHPACECR*LVPIRG
Trigger: TCCTCTGATTGGGACAAGGCACCTGCATTCACAGGC...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCTCCCCAGTAAAGAAATaGAGCAACACCAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCASPVKK*SNTSQR
Trigger: CCTTTGGCTGGTGTTGCTGCATTTCTTTACTGGGGA...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATAAGACTGCCGGCAGATaGTGGTACAATAAGCACACA +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNKTAGR*WYNKHT
Trigger: TGTGTGCTTATTGTACCAGCATCTGCCGGCAGTCTT...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581729.1
CDS-3UTR GCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTTCCAGAAAAGTGCCCTaGCCTTCCACACCAGGATCC +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSSRKVP*PSTPGS
Trigger: GGATCCTGGTGTGGAAGGGCAGGGCACTTTTCTGGA...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATAGGAGGTTTAGGTCCTaGCAAGAGCTCACAGATCCT +
Preference number: 4 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYRRFRS*QELTDP
Trigger: AGGATCTGTGAGCTCTTGGCAGGACCTAAACCTCCT...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATTTGGTCCAGCCTCTTaGGCCCAGGCCTGGTATGCA +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQFGPAS*AQAWYA
Trigger: TGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTCTGAGGAATTCCACCTaGCAGGAGGGAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPLRNST*QEGGNS
Trigger: GGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAG...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCAGGAAGCACTCTCTaGGTAGAGGACAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSAGSTL*VEDRDR
Trigger: CCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGC...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCATGTCCTCCGAGTTGCTaGGCATGGGGAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSCPPSC*AWGVAW
Trigger: CCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACA...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATGGTGTCTCAGCACATaGGGACACAGCTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQWCLST*GHSLQA
Trigger: GGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAAGAGGGGACAGTGATGTaGCTCTTCAAGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: CCHNFAKAGWHQNTKEGKEGTVM*LFKDLI
Trigger: AATGAGATCCTTGAAGAGCCACATCACTGTCCCCTC...TTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCTTCTGGATGAAGCCTaGCATGCTCAGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVLLDEA*HAQLLP
Trigger: TGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAAATGAAGGCAGGGTCTaGGCACAGGCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQNEGRV*AQAGSG
Trigger: CCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTAGGTGCAATATAATTCTGTTAAATGAAGGCAGGGTCTaGGCACAGGCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GALVIQGIGSSRCNIILLNEGRV*AQAGSG
Trigger: CCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATT...TAACAGAATTATATTGCACCTACTGCTTCCTATTCCCTGAATCACTAGCGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAATCCTAACAGCCAGGAAGAAATGGCCTCCCAGTAGCTCTGAAAGATGTGCCGCATCCAGCACATCTTaGATATCCTGGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QILTARKKWPPSSSERCAASSTS*ISWELS
Trigger: TGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGC...GGCACATCTTTCAGAGCTACTGGGAGGCCATTTCTTCCTGGCTGTTAGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTGCTGAAGACTCAAGTTaGGCTCCAGGCCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPAEDSS*APGPAN
Trigger: GTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAGC...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTTGGGCTCGTCAACCCTaGCTGAAGACTCAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSWARQP*LKTQVG
Trigger: CCCAACTTGAGTCTTCAGCCAGGGTTGACGAGCCCA...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
3UTR CAA 72 bp TGGCTTGACCTGGAGGTAGCAATTCCTTCAAGCCATTaGCTCATCTTACATTGGTTCGTGGGCCATGGAATG +
Preference number: 4 (lower is better)
Translates to: WLDLEVAIPSSH*LILHWFVGHGM
Trigger: CATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGAAGGAATTGCTACCTCCAGGTCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGACGCTGGTGAGTCTTaGGGTCCTGTACTGAGACGA +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLIDAGES*GPVLRR
Trigger: TCGTCTCAGTACAGGACCTCAAGACTCACCAGCGTC...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAGAGGGTGTTGCTGAATaGAGGCAGGGTCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSEGVAE*RQGLGT
Trigger: TGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTC...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTAAGAGCCAAAGAAAATaGGGTGAACCTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: PALLTETIIAMLSALPPTKSQRK*GEPSDH
Trigger: ATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCATATTAATAGGGCCATaGTTTCCTGTTGCCACAATT +
Preference number: 4 (lower is better)
Translates to: PTASKSFVPSAPATKSEPILIGP*FPVATI
Trigger: AATTGTGGCAACAGGAAATCATGGCCCTATTAATAT...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTCTGGGACCCCAGAGATaGGTACCAGTGAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSLGPQR*VPVRND
Trigger: GTCATTTCTCACTGGTACTCATCTCTGGGGTCCCAG...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTCTAGGCATTCATATTTaGCTTCCTGCAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSLGIHI*LPAGPS
Trigger: GCTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAG...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GGAGGTTCTAATGGGACGATCTTCGACGGTTTCCTTTCCAGCTCAAAAGAAAGCCTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGSNGTIFDGFLSSSKESLIVRL*FRSTFW
Trigger: CCAGAAGGTGCTCCGAAATCACAACCGTACAATTAG...GCTTTCTTTTGAGCTGGAAAGGAAACCGTCGAAGATCGTCCCATTAGAACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR TCA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGCTAATTGTACGGTTGTaGTTTCGGAGCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTLIVRL*FRSTFW
Trigger: CCAGAAGGTGCTCCGAAATCACAACCGTACAATTAG...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTTTGGGCTCCAGGCCCTaGAAACTGCAAGACCACTCT +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLILGSRP*KLQDHS
Trigger: AGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAA...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTTGTTCCCTCAGCTCCTaGGACAAAGTCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPCSLSS*DKVRTQ
Trigger: CTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACA...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATACCAATGGAGTCAACTaGACATTAGGCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: VATILPRQAGTRTPKKGNTNGVN*TLGSLT
Trigger: TGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGT...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAACAATCAATTACCAATaGAGTCAACTGGACATTAGG +
Preference number: 4 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQTINYQ*SQLDIR
Trigger: CCTAATGTCCAGTTGACTCCATTGGTAATTGATTGT...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAAGAGGAACATGGTCATaGGCTCGTCAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQRGTWS*ARQPWL
Trigger: CAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTAGAGGAACATGGTCATaGGCTCGTCAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLIRGTWS*ARQPWL
Trigger: CAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCT...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GGAGCGCTAGTGATTCAGGGAATAGGAAGCAGTAGGTGCAATATAATTCTGTTAAGGACAATCGGAGCCTaGGGTTCACGTGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GALVIQGIGSSRCNIILLRTIGA*GSRESG
Trigger: TCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCT...TAACAGAATTATATTGCACCTACTGCTTCCTATTCCCTGAATCACTAGCGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp TATCGATCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACTACCATTTCTTCTGCTaGACGAAAAGCTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YRSRICLRPGPWETYRANYHFFC*TKSSSL
Trigger: AAGAGAAGAGCTTTTCGTCCAGCAGAAGAAATGGTA...GTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGATCGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGACCAGCCAAAGGCATTaGTATCTCCAAAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: EEARIPRELEYSDSRIERTSQRH*YLQRIV
Trigger: AACAATTCTTTGGAGATACCAATGCCTTTGGCTGGT...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CCA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACACGAATGATGCTTTCTTaGACTCTGTTCACATGGCCT +
Preference number: 4 (lower is better)
Translates to: TVPLVLKGERALFIWFCTRMMLS*TLFTWP
Trigger: AGGCCATGTGAACAGAGTCCAAGAAAGCATCATTCG...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGTTGGTTCGTGGGCCATaGAATGGTGTCGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVLVRGP*NGVESF
Trigger: AAAGCTCTCGACACCATTCCATGGCCCACGAACCAA...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAAAAGGTCCAGGTCTATaGGCTCACAGCTCAGGACGC +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSKGPGL*AHSSGR
Trigger: GCGTCCTGAGCTGTGAGCTCATAGACCTGGACCTTT...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAAAGAGCCAAAGAAAATaGGGTGAACCTTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSKSQRK*GEPSDH
Trigger: ATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTT...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGACTCAAACCAGCGGACTaGAGAGCCAAAGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGLKPAD*RAKENE
Trigger: CTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAG...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTACCAAGAGACAGGATaGAGTAAGCTTTCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSYQETG*SKLSVY
Trigger: GTAAACAGAAAGCTTACTTCATCCTGTCTCTTGGTA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCATCCCACAGCTCCAAGTaGCCTTCCCCTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSSHSSK*PSPEEF
Trigger: GAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGA...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp GGAATTCACATTCAGCAGTCTCAAGAGCGACTGTTAGCTTCACACACCTTCTCAGAGGACGCCGAGATATaGAGGATGAACCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GIHIQQSQERLLASHTFSEDAEI*RMNHPF
Trigger: AAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTC...TGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR GCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTACTGCAAGACCACTCTaGCTGGCACTTGGACGAAAT +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPTARPL*LALGRN
Trigger: ATTTCGTCCAAGTGCCAGGCAGAGTGGTCTTGCAGT...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTCTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSLSGHP*SSVNRR
Trigger: CCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAG...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp TACCCTCAGGCCAGATTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCCATGATTTCCTGTTaGCACAATTTTGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: YPQARLDSTSPCSYSAVSAMISC*HNFAKA
Trigger: TGCCTTGGCAAAATTGTGGCAACAGGAAATCATGGC...ACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAATCTGGCCTGAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACCTTGGTTCCTTCCCTaGGACAACCAGACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQPWFLP*DNQTVF
Trigger: GAAGACTGTCTGGTTGTCCCAGGGAAGGAACCAAGG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAGGCAGGGAACCACTTTaGTCCCGAAGTTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQGREPL*SRSCRQ
Trigger: TTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCC...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGGCAGGGAACCACTTTaGTCCCGAAGTTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLIGREPL*SRSCRQ
Trigger: TTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCC...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAAGAGTCCAGTTGTCCTaGACAGTGAGGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQRVQLS*TVRQDA
Trigger: TGCATCCTGCCTCACTGTCCAGGACAACTGGACTCT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAAAACATTGTGAGATCTaGAAACCCTTTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: CSGPPVNAGALSQSEDILKHCEI*KPFSPT
Trigger: AGTTGGAGAAAAGGGTTTCCAGATCTCACAATGTTT...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAATCACTTTCCACCTTTaGCCCTGGCGGCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSITFHL*PWRQRA
Trigger: AGCCCTTTGCCGCCAGGGCCAAAGGTGGAAAGTGAT...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp TACCCTCAGGCCAGATTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTTTTCGGAGCACCTTCTaGTCTCAAGGTATATCGATC +
Preference number: 4 (lower is better)
Translates to: YPQARLDSTSPCSYSAVSFRSTF*SQGISI
Trigger: GATCGATATACCTTGAGACCAGAAGGTGCTCCGAAA...ACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAATCTGGCCTGAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CAA 72 bp GGATGTGGATTTAGCCGCAAAATCACGCTGTTTCAATaGAATAAAGGCACCGCTGGGATTCGAACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GCGFSRKITLFQ*NKGTAGIRTQD
Trigger: ATCCTGGGTTCGAATCCCAGCGGTGCCTTTATTCAATTGAAACAGCGTGATTTTGCGGCTAAATCCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
3UTR CAA 72 bp GGTAGCAATTCCTTCAAGCCATTTGCTCATCTTACATaGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSNSFKPFAHLT*VRGPWNGVESF
Trigger: AAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGAAGGAATTGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTCTTGAGGTCCTGTACTaGGACGAAGCTATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TPAKGIGISKELFLDPLILEVLY*DEAIAE
Trigger: CTCAGCTATAGCTTCGTCTCAGTACAGGACCTCAAG...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR TCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCCTTCTTTGTGCTTGTaGACACCTCTAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVPSLCL*TPLGIH
Trigger: ATGAATGCCTAGAGGTGTTCACAAGCACAAAGAAGG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTCTCTCAGGCCATCCTTaGAGTTCAGTTAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLLSGHP*SSVNRR
Trigger: CCTCCTGTTAACTGAACTGCAAGGATGGCCTGAGAG...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGAACTCAACTGGCTCTTaGATCACTTGTCCATTCCTC +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVNSTGS*ITCPFL
Trigger: GAGGAATGGACAAGTGATGCAAGAGCCAGTTGAGTT...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAACCAATGGAGTCAACTaGACATTAGGCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGTNGVN*TLGSLT
Trigger: TGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGT...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCACTTCTGGATGAAGCCTaGCATGCTCAGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSLLDEA*HAQLLP
Trigger: TGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAG...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGACATCTTGGATATCCTaGGAGCTTTCAAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVTSWIS*ELSSSR
Trigger: TCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGT...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTGTGTCCAGAGGAACATaGTCATGGGCTCGTCAACCC +
Preference number: 4 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIVSRGT*SWARQP
Trigger: GGGTTGACGAGCCCATGACCATGTTCCTCTGGACAC...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTTTTGCCAAGGCAGGCTaGCACCAGAACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLFAKAG*HQNTKE
Trigger: TTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAA...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCCAGGAAGGGAAGCTaGTTCTCACGTCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVISRKGS*FSRPSL
Trigger: TAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGA...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTCTGTTGCCACAATTTTaGCAAGGCAGGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVILLPQF*QGRLAP
Trigger: TGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAG...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCATAGGAAGCAGTAGGTaGAATATAATTCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSIGSSR*NIILLP
Trigger: TGGTAACAGAATTATATTGCACCTACTGCTTCCTAT...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACAACAATCAATTACCAATaGAGTCAACTGGACATTAGG +
Preference number: 4 (lower is better)
Translates to: TVPLVLKGERALFIWFCTTINYQ*SQLDIR
Trigger: CCTAATGTCCAGTTGACTCCATTGGTAATTGATTGT...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAAGCCTGATGATGGCCTaGCTTATAGCTGTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSSLMMA*LIAVCV
Trigger: TACGCAGACAGCTATAAGCCAGGCCATCATCAGGCT...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTTTGCTCATCTTACATTaGTTCGTGGGCCATGGAATG +
Preference number: 4 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSLLILH*FVGHGM
Trigger: CATTCCATGGCCCACGAACCAATGTAAGATGAGCAA...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR TCA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCATGGAGTAGCAGTTTGTaGATCTGGAGTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSWSSSL*IWSPWF
Trigger: GAACCAAGGACTCCAGATTCACAAACTGCTACTCCA...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR GCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATGCAGGAAATGTGGGTaGTATGAGTGCAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQCRKCG*YECRTE
Trigger: TTCTGTTCTGCACTCATAGCACCCACATTTCCTGCA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR GCA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTTGAAGCGATTCTCTTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVILKRFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAAGAGAATCGCTTCAA...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp CAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTCGGAGCACCTTTTTCGGAGCACCTTCTaGTCTCAAGGTATATCGATC +
Preference number: 4 (lower is better)
Translates to: QRIVPRSPNCTVVISEHLFRSTF*SQGISI
Trigger: GATCGATATACCTTGAGACCAGAAGGTGCTCCGAAA...AAGGTGCTCCGAAATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAACCAGCCAAAGGCATTaGTATCTCCAAAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGTSQRH*YLQRIV
Trigger: AACAATTCTTTGGAGATACCAATGCCTTTGGCTGGT...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp CCAACATATGGGTTTAACCACGCTCTAAAGGTCTCCCAAACACGAACAAATCCTTACCATTTCTTCTGCTaGACGAAAAGCTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTYGFNHALKVSQTRTNPYHFFC*TKSSSL
Trigger: AAGAGAAGAGCTTTTCGTCCAGCAGAAGAAATGGTA...AGGATTTGTTCGTGTTTGGGAGACCTTTAGAGCGTGGTTAAACCCATATGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAATTAGAGGACCGCATCTaGAAGCTGTGCCAAATTTTA +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQLEDRI*KLCQIL
Trigger: TAAAATTTGGCACAGCTTCCAGATGCGGTCCTCTAA...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CCA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAACAATCAATTACCAATaGAGTCAACTGGACATTAGG +
Preference number: 4 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQTINYQ*SQLDIR
Trigger: CCTAATGTCCAGTTGACTCCATTGGTAATTGATTGT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS CCA 90 bp CGGGGCAGGGGGTTCCCATTTGGTCCAGCCTCTTGGGCCCAGGCCTaGTATGCACTACTGCTCCACGACAGGTGGCTGCAGCATGGGAGA +
Preference number: 5 (lower is better)
Translates to: RGRGFPFGPASWAQA*YALLLHDRWLQHGR
Trigger: TCTCCCATGCTGCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CCA 90 bp AACAGCTGCTCTCGGGGCAGGGGGTTCCCATTTGGTCCAGCCTCTTaGGCCCAGGCCTGGTATGCACTACTGCTCCACGACAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NSCSRGRGFPFGPAS*AQAWYALLLHDRWL
Trigger: CAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCGAGAGCAGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGCAAGCCAGGCGGCGATaGAGTTGGCAGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLQARRR*SWQLGR
Trigger: CCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTG...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGGCATGGGGAGTGGCTaGGGGTCAGCCTCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLGMGSG*GSASKR
Trigger: CCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGAAAGGCAGGACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCGCAGGGGGTTCCCATTaGGTCCAGCCTCTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RKAGQSEPGVHVSQERELAGGSH*VQPLGP
Trigger: GGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGC...GAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp TTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGGCCGCCGGCATGGGGAGTGGCTaGGGGTCAGCCTCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: FCSLSSCDKVRTQVLRAAGMGSG*GSASKR
Trigger: CCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCC...GGCGGCCCTGAGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCCAGGCGGCGATTGAGTaGGCAGCTGGGCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPQAAIE*AAGQVG
Trigger: TCCTACCTGCCCAGCTGCCAACTCAATCGCCGCCTG...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCGCTTGTGCCTGGCACTaGCCTCCCCCTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: PTGLTVAWGPIAQSPRVLACAWH*PPPTPS
Trigger: AGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGC...GAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS TCA 90 bp GCCTCACTACCCATCCCAGGCCAGAGCTGCTGCCCTCACATGACATaGAAGCCCACACCTGACCCCCACCTTAGAGGGGTGACACCTTCT +
Preference number: 5 (lower is better)
Translates to: ASLPIPGQSCCPHMT*KPTPDPHLRGVTPS
Trigger: AGAAGGTGTCACCCCTCTAAGGTGGGGGTCAGGTGTGGGCTTTCATGTCATGTGAGGGCAGCAGCTCTGGCCTGGGATGGGTAGTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS GCA 90 bp CCATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTaGGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: PSSTRSLMMAWLIAV*VGQVEPRRVHFPWD
Trigger: ATCCCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 90 bp AGGCCCAGGCCTTACGCTGTCCTTCTTCTTTCAGGGTGGCCAGAGTaGGGAAGGAGGAGGGAGTCTGCAGCCGAGTGTACTGTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RPRPYAVLLLSGWPE*GRRRESAAECTVKE
Trigger: CTCCTTGACAGTACACTCGGCTGCAGACTCCCTCCTCCTTCCCCACTCTGGCCACCCTGAAAGAAGAAGGACAGCGTAAGGCCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583254.1
CDS-3UTR CAA 90 bp ATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGATCCTCAAGCCAGGCTaGTTCGGAGGAAGGGACCTG +
Preference number: 5 (lower is better)
Translates to: ICLRPGPWETYRANRSLGILKPG*FGGRDL
Trigger: CAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGAT...CCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATAGCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGGGGCAGTGTAGAACCTaGGTTCCTTCCCTGGGACAA +
Preference number: 5 (lower is better)
Translates to: IAVCVGQVEPRRVHFPCRGQCRT*VPSLGQ
Trigger: TTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCCC...CCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACATTCATGAGGGCCTCCTaGTGGCAGAGCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RASGAQASALSLPADAGTFMRAS*WQSKKS
Trigger: GCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAA...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CAA 90 bp CGACTAGGAGTTCCTAGGAGGTGGACAACTAGGAGTCAGGAGGCCTGGGACCCCGGGCAGTGTAGAACCTaGGTTCCTTCCCTGGGACAA +
Preference number: 5 (lower is better)
Translates to: RLGVPRRWTTRSQEAWDPGQCRT*VPSLGQ
Trigger: TTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCCC...GGGGTCCCAGGCCTCCTGACTCCTAGTTGTCCACCTCCTAGGAACTCCTAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CGTCCCTCTCTACGATCAACTGAAACCTCTCTGCCCGCACCAGGCAGCCTATCATTCTTGTCCTCCGAGTaGCTGGGCATGGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: RPSLRSTETSLPAPGSLSFLSSE*LGMGSG
Trigger: GCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAA...TGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGTTCTTGTCCTCCGAGTaGCTGGGCATGGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRFLSSE*LGMGSG
Trigger: GCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAA...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGGGGCTTTCTGGATCCTTCTaGTCCTCCGAGTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GLEWGLTTLQKFSQVDVGLSGSF*SSELLG
Trigger: GCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAG...CCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTGAAGACCAAGCCAGGCGGCGATaGAGTTGGCAGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PADAGTISTHPEELKAEDQARRR*SWQLGR
Trigger: CCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTG...GTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCAAGCCAGGCGGCGATaGAGTTGGCAGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTQARRR*SWQLGR
Trigger: CCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTG...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTCCACCAGGAGGGCAGGGAACCACTTaGGTCCCGAAGTTGCAGACA +
Preference number: 5 (lower is better)
Translates to: HGDSYRSPRLRQSHPPPGGQGTT*VPKLQT
Trigger: TGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCC...TCCTGGTGGAGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGAAACTGAGGGCGGGCTaGGGCACCTCTGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: LKTQVGLQALQTARPLCLKLRAG*GTSGLA
Trigger: AGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTT...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS CCA 90 bp GGACAAGACTTTCTGGATCCTTCTTGTCCTCCGAGTTGCTGGGCATaGGGAGTGGCTTGGGGTCAGCCTCTAAGAGGGGTCCTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GQDFLDPSCPPSCWA*GVAWGQPLRGVLPA
Trigger: AGCTGGAAGGACCCCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCAATCCTCAAGCCAGGCTaGTTCGGAGGAAGGGACCTG +
Preference number: 5 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRAILKPG*FGGRDL
Trigger: CAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGAT...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGGCGGCGATTGAGTaGGCAGCTGGGCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAQAAIE*AAGQVG
Trigger: TCCTACCTGCCCAGCTGCCAACTCAATCGCCGCCTG...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAAACTGAGGGCGGGCTaGGGCACCTCTGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: PTASKSFVPSAPATKSEPKLRAG*GTSGLA
Trigger: AGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTT...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGCTTGTGCCTGGCACTaGCCTCCCCCTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQACAWH*PPPTPS
Trigger: AGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTCCACCAGGATGCACACCTCTGAGCTaGTTTCTGAGCCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HGDSYRSPRLRQSHPPPGCTPLS*FLSLSR
Trigger: CCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCA...TCCTGGTGGAGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTGGTCCAGCCCAGTGCTaGGCACAAACGTGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTGPAQC*AQTWSR
Trigger: CCGAGACCACGTTTGTGCCAAGCACTGGGCTGGACC...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS TCA 90 bp TTAGGCTCCTTGACAGCTGGACACAGGGTCTTTTGGATGAAGACCTaGGCATCCTCAAGCCAGGCTTGTTCGGAGGAAGGGACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGSLTAGHRVFWMKT*ASSSQACSEEGTWA
Trigger: GGCCCAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS TCA 90 bp CTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGGGATaGAGACAGTGGTTGGAAAAGTCCTCTTGGTCCCATCACATCCCT +
Preference number: 5 (lower is better)
Translates to: LRRASGAQASALSLG*RQWLEKSSWSHHIP
Trigger: AGGGATGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 90 bp GCTGTCTGCGTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTaGGATGAAGACAGTGGTTGGAAAAGTCCTCTTGGTCCCATCACA +
Preference number: 5 (lower is better)
Translates to: AVCVGQVEPRRVHFP*DEDSGWKSPLGPIT
Trigger: TGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTACGCAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS-3UTR CAA 90 bp AGTGGCCTGGAATGGGGACTGACCACCCTGCAGAAGTTCAGCCAGGTAGATGTGTGGACATTAGGCTCCTaGACAGCTGGACACAGGGTC +
Preference number: 5 (lower is better)
Translates to: SGLEWGLTTLQKFSQVDVWTLGS*TAGHRV
Trigger: GACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCA...CACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp TCAAGGATCTGCCTTAGGCCAGGCCCTTGGGAAACCTACAGGGCTAACCGTAGCGGGCAGTGTAGAACCTaGGTTCCTTCCCTGGGACAA +
Preference number: 5 (lower is better)
Translates to: SRICLRPGPWETYRANRSGQCRT*VPSLGQ
Trigger: TTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCCC...GCTACGGTTAGCCCTGTAGGTTTCCCAAGGGCCTGGCCTAAGGCAGATCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGATTTGGTCCAGCCTCTaGGGCCCAGGCCTGGTATGC +
Preference number: 5 (lower is better)
Translates to: SALSLPADAGTISTHPEEIWSSL*GPGLVC
Trigger: GCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAAT...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTATTTGGTCCAGCCTCTaGGGCCCAGGCCTGGTATGC +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTIWSSL*GPGLVC
Trigger: GCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAAT...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCAGTCCACCTGCACCAGTGGGGTGTGGCATCAGTTAAGCAAAGGACCCTTAGGCTTTCTGGATCCTTCTaGTCCTCCGAGTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PVHLHQWGVASVKQRTLRLSGSF*SSELLG
Trigger: GCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAG...CCTAAGGGTCCTTTGCTTAACTGATGCCACACCCCACTGGTGCAGGTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCGGGCAGGGAACCACTTaGGTCCCGAAGTTGCAGACA +
Preference number: 5 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCGQGTT*VPKLQT
Trigger: TGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCC...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGCTGAAGGCTGAAGACAAACTGAGGGCGGGCTaGGGCACCTCTGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: PADAGTISTHPEELKAEDKLRAG*GTSGLA
Trigger: AGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTT...GTCTTCAGCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CAA 90 bp AGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGCCGGCAGATGCTGGTACAAAGGAATCTGTGAAATaGTCACTGAGCAGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: RASGAQASALSLPADAGTKESVK*SLSRSV
Trigger: GACCGACCTGCTCAGTGACAATTTCACAGATTCCTT...TGTACCAGCATCTGCCGGCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CTGCAGGGCCCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LQGPALLTETIIAMLSALPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...CAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGGGCCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGTCTAGGCATTCATATTaGACTTCCTGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLSRHSY*TSCRAQ
Trigger: CTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAGA...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp TTACTCCTTACCCTGACATCCCGCTGGTGGAGAGGGATGGAGGTAACTGCAAGTGCTTGTGCCTGGCACTaGCCTCCCCCTACACCTTCT +
Preference number: 5 (lower is better)
Translates to: LLLTLTSRWWRGMEVTASACAWH*PPPTPS
Trigger: AGAAGGTGTAGGGGGAGGCAAGTGCCAGGCACAAGC...ACTTGCAGTTACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS CCA 90 bp AGGACTGACTGGTCATCCAAACATGCTGGCGCTGACCACGGATCTTaGACACTCGCAGTTCTGTCAGCACATAGGCTGTACCAGGCCGAA +
Preference number: 5 (lower is better)
Translates to: RTDWSSKHAGADHGS*TLAVLSAHRLYQAE
Trigger: TTCGGCCTGGTACAGCCTATGTGCTGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTGGATGACCAGTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 90 bp GTGGAGCCCAGGCGAGTGCACTTTCCCTGGGATGAAGACAGTGGTTaGAAAAGTCCTCTTGGTCCCATCACATCCCTCTGGCACTCCATA +
Preference number: 5 (lower is better)
Translates to: VEPRRVHFPWDEDSG*KSPLGPITSLWHSI
Trigger: TATGGAGTGCCAGAGGGATGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCTGGGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 90 bp CACTACCATCTTCTTTCCACATCTGAACTCCAAACCTATCAGCCGTaGGTCACTGAGGGGTTGAGAGTGCTTGGCCAGGAGCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: HYHLLSTSELQTYQP*VTEGLRVLGQEQAG
Trigger: CCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGATAGGTTTGGAGTTCAGATGTGGAAAGAAGATGGTAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS-3UTR CAA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTGGACATTAGGCTCCTaGACAGCTGGACACAGGGTC +
Preference number: 5 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCWTLGS*TAGHRV
Trigger: GACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCA...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GGAGGTTCTAATGGGACGATCTTCGACGGTTTCCTTTCCAGCTCAAAAGAAAGCGCAGGGGGTTCCCATTaGGTCCAGCCTCTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GGSNGTIFDGFLSSSKESAGGSH*VQPLGP
Trigger: GGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGC...GCTTTCTTTTGAGCTGGAAAGGAAACCGTCGAAGATCGTCCCATTAGAACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCTGACGAGAGAAGCTTaGAAGCAGAACGGCGCCACG +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTLTREA*KQNGAT
Trigger: CGTGGCGCCGTTCTGCTTCAAAGCTTCTCTCGTCAG...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCGAGGTGTTGAGGGTGTaGCTGAATGAAGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PTASKSFVPSAPATKSEPEVLRV*LNEGRV
Trigger: GACCCTGCCTTCATTCAGCAACACCCTCAACACCTC...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCCACAGCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCCACCAGAGGGCTTCATaGCAGGTCAATAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PTASKSFVPSAPATKSEPHQRAS*QVNRPV
Trigger: GACAGGCCTATTGACCTGCAATGAAGCCCTCTGGTG...GGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCGCTATGCTCTCTGCCTaGCCGCCAACTCCCCAATTT +
Preference number: 5 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCAMLSA*PPTPQF
Trigger: AAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGC...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS TCA 90 bp CAGGGCAGGGAACCACTTTGGTCCCGAAGTTGCAGACAACCTTTATaGGATGAAGCCACCAGAACCCCAAGTAAAACCTGGGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QGREPLWSRSCRQPL*DEATRTPSKTWAGQ
Trigger: CTGCCCAGCCCAGGTTTTACTTGGGGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581967.1
ENST00000583254.1
ENST00000651323.1
CDS TCA 90 bp GTGACACTACACATCTTCACCTGGAAACCCTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: VTLHIFTWKPFSPTG*SGPGLLEVVLVREA
Trigger: TGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTGAAGATGTGTAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578240.1
ENST00000584439.1
CDS GCA 90 bp TTCACCAGAGCACTCAATCGAACTAGACTCCCAGCCAGGTTTCGCTaGACACCTCTGAGCTTGTTTCTGAGCCTGAGCAGGCAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: FTRALNRTRLPARFR*TPLSLFLSLSRQEA
Trigger: TGCTTCCTGCCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGGGAGTCTAGTTCGATTGAGTGCTCTGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 90 bp GCAGGTGACACTACACATCTTCACCTGGAAACCCTTTTCTCCAACTaGCTGAAGTGGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: AGDTTHLHLETLFSN*LKWTRAPGSSPSEG
Trigger: TCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTGAAGATGTGTAGTGTCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578240.1
ENST00000584439.1
CDS-3UTR CAA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGATGGACACAGGGTCTTTaGGATGAAGACCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: TIGAWGSRESGKGALHTGWTQGL*DEDLSI
Trigger: GATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCA...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGCAGGGGGTTCCCATTaGGTCCAGCCTCTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGAGGSH*VQPLGP
Trigger: GGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTGCTGCCACATGGTGATTCCTACAGGTCACCACGGCTTCGGCAGTCCCATCCTGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAA +
Preference number: 5 (lower is better)
Translates to: LLPHGDSYRSPRLRQSHPDLSEV*RVLLNE
Trigger: TTCATTCAGCAACACCCTCAACACCTCAGACAGATC...AGGATGGGACTGCCGAAGCCGTGGTGACCTGTAGGAATCACCATGTGGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CAA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTATTCATGAGGGCCTCCTaGTGGCAGAGCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CSGPPVNAGALSQSEDILFMRAS*WQSKKS
Trigger: GCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAA...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCTTCATGAGGGCCTCCTaGTGGCAGAGCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PRPSGFQQGRTLRPSLQFFMRAS*WQSKKS
Trigger: GCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAA...GAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCACAAGGGGTTCACATAGTGTCCGTGACAAAATCTCAGCGGAGAAAGACACCAAAACTGAGGGCGGGCTaGGGCACCTCTGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: PQGVHIVSVTKSQRRKTPKLRAG*GTSGLA
Trigger: AGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTT...TGGTGTCTTTCTCCGCTGAGATTTTGTCACGGACACTATGTGAACCCCTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGCCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCAGCGAGCAAGTCTTTaGTTCCCTCAGCTCCTGCGA +
Preference number: 5 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAQRASL*FPQLLR
Trigger: TCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTG...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTACAGCGAGCAAGTCTTTaGTTCCCTCAGCTCCTGCGA +
Preference number: 5 (lower is better)
Translates to: CSGPPVNAGALSQSEDILQRASL*FPQLLR
Trigger: TCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTG...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGCACCAGAGGGCTTCATaGCAGGTCAATAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: GPPVNAGALSQSEDILIGHQRAS*QVNRPV
Trigger: GACAGGCCTATTGACCTGCAATGAAGCCCTCTGGTG...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCAGAGTCCTCACCTGCACCAGCCAAAGGCATaGGTATCTCCAAAGAATTGT +
Preference number: 5 (lower is better)
Translates to: RANRSLGPYSTVTQSPHLHQPKA*VSPKNC
Trigger: ACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTG...CAGGTGAGGACTCTGGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GGAGGGTGCCGACTGGATCATCCCATCCTGGAGAGAAATATGGTCAGTATGCTGCATGGGAGTGGCAGCTaGACTCTGCAGGAAATGTGG +
Preference number: 5 (lower is better)
Translates to: GGCRLDHPILERNMVSMLHGSGS*TLQEMW
Trigger: CCACATTTCCTGCAGAGTCAAGCTGCCACTCCCATG...CAGCATACTGACCATATTTCTCTCCAGGATGGGATGATCCAGTCGGCACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GCGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCACGTGCCTTGTTCATTaGGTTCTGCACAGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ASKSFVPSAPATKSEPRCTCLVH*VLHRVQ
Trigger: CTGGACCCTGTGCAGAACCAAATGAACAAGGCACGT...GCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS TCA 90 bp TTCCAGGAAGGGAAGCTGCTTCTCACGTCCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACCAGGCAGCCTAGAGGAAGAAAGTTT +
Preference number: 5 (lower is better)
Translates to: FQEGKLLLTSLSTIN*NLSARTRQPRGRKF
Trigger: AAACTTTCTTCCTCTAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS TCA 90 bp AAAGCTAGGGGAAGACTAGGAGGAGGACCAGCCTGCAACACCTCGTaGGGGTACTGGCTGGGCACAAATGGCAGACTGATATATGGAAAC +
Preference number: 5 (lower is better)
Translates to: KARGRLGGGPACNTS*GYWLGTNGRLIYGN
Trigger: GTTTCCATATATCAGTCTGCCATTTGTGCCCAGCCAGTACCCTCACGAGGTGTTGCAGGCTGGTCCTCCTCCTAGTCTTCCCCTAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CCA 90 bp ACTACACATCTTCACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: TTHLHLETLFSNWLK*TRAPGSSPSEGGKC
Trigger: ACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTGAAGATGTGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578240.1
ENST00000584439.1
CDS-3UTR CAA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTGGACATTAGGCTCCTaGACAGCTGGACACAGGGTC +
Preference number: 5 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSWTLGS*TAGHRV
Trigger: GACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATCCTCCACCAGGAGCCTGATGATGGCCTGGCTTATAGCTGTCTGCGTAGGGCATCTTCAAGGATCTCATaGTGTGCATTCCGAACAGGG +
Preference number: 5 (lower is better)
Translates to: ILHQEPDDGLAYSCLRRASSRIS*CAFRTG
Trigger: CCCTGTTCGGAATGCACACAATGAGATCCTTGAAGA...TGCCCTACGCAGACAGCTATAAGCCAGGCCATCATCAGGCTCCTGGTGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGCAGGCGGCGATTGAGTaGGCAGCTGGGCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: QFCQGRLAPEHQRREIIVQAAIE*AAGQVG
Trigger: TCCTACCTGCCCAGCTGCCAACTCAATCGCCGCCTG...CACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCAGTGAGGTGTTGAGGGTGTaGCTGAATGAAGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RPSGFQQGRTLRPSLQFSEVLRV*LNEGRV
Trigger: GACCCTGCCTTCATTCAGCAACACCCTCAACACCTC...ACTGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp ACCAGGATCCCTAGCGACTCCCGAATGATGCTTTCTTGGACTCTGTTCACATGGGAGGTGTTGAGGGTGTaGCTGAATGAAGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TRIPSDSRMMLSWTLFTWEVLRV*LNEGRV
Trigger: GACCCTGCCTTCATTCAGCAACACCCTCAACACCTC...CCATGTGAACAGAGTCCAAGAAAGCATCATTCGGGAGTCGCTAGGGATCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTTCATGAGGGCCTCCTaGTGGCAGAGCAAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSFMRAS*WQSKKS
Trigger: GCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCGATTCAGGCAATGACTaGTTTGCATCCAGCACATCT +
Preference number: 5 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPDSGND*FASSTS
Trigger: AGATGTGCTGGATGCAAACAAGTCATTGCCTGAATC...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGCACTTAAGGAATCTGTGAAATaGTCACTGAGCAGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: TQVGLQALQTARPLCLALKESVK*SLSRSV
Trigger: GACCGACCTGCTCAGTGACAATTTCACAGATTCCTT...AAGTGCCAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp GAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTCCCCAATTTACTTCCTGCACACCTCTGAGCTaGTTTCTGAGCCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ETIIAMLSALPPTPQFTSCTPLS*FLSLSR
Trigger: CCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCA...GGAAGTAAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGTGCACTTTCCCTGCCGGCAGATGCTGGTACAATAAGCACACACCCAGAAGAGAGGCAGAAGGATCACTaGAGCTCAGGAGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: SALSLPADAGTISTHPEERQKDH*SSGGGD
Trigger: ATCTCCACCTCCTGAGCTCAAGTGATCCTTCTGCCT...CTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGGAAAGTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS TCA 90 bp CCTGCAACACCTCGTGAGGGTACTGGCTGGGCACAAATGGCAGACTaGTATATGGAAACCTGTATGAAAGAGAAGGGGTCGCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PATPREGTGWAQMAD*YMETCMKEKGSLQQ
Trigger: TTGCTGCAGCGACCCCTTCTCTTTCATACAGGTTTCCATATATCAGTCTGCCATTTGTGCCCAGCCAGTACCCTCACGAGGTGTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CCA 90 bp GCAAGTGGAAGAGGAATAGTGAGTGACCAGGAAGACAAGGCAAATTaGGGTAGAAGCTGGGACTCAGAGATCAAGCACCACAGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: ASGRGIVSDQEDKAN*GRSWDSEIKHHRVA
Trigger: GGCCACTCTGTGGTGCTTGATCTCTGAGTCCCAGCTTCTACCCCAATTTGCCTTGTCTTCCTGGTCACTCACTATTCCTCTTCCACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CCA 90 bp GAAGACAGTGGTTGGAAAAGTCCTCTTGGTCCCATCACATCCCTCTaGCACTCCATACTCAGTTCAGCCTGTTCCTTCCCTCCCTTACCT +
Preference number: 5 (lower is better)
Translates to: EDSGWKSPLGPITSL*HSILSSACSFPPLP
Trigger: AGGTAAGGGAGGGAAGGAACAGGCTGAACTGAGTATGGAGTGCCAGAGGGATGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTTGGACACAGGGTCTTTaGGATGAAGACCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTWTQGL*DEDLSI
Trigger: GATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCA...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGACTTTGGTCCCGAAGTaGCAGACAACCTTTATGAGA +
Preference number: 5 (lower is better)
Translates to: LKTQVGLQALQTARPLCLTLVPK*QTTFMR
Trigger: TCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGT...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAA +
Preference number: 5 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQDLSEV*RVLLNE
Trigger: TTCATTCAGCAACACCCTCAACACCTCAGACAGATC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTGAAGACTCAAGTTGGGCTCCAGGCCCTGCAAACTGCAAGACCACTCTGCCTGGATTCAGGCAATGACTaGTTTGCATCCAGCACATCT +
Preference number: 5 (lower is better)
Translates to: LKTQVGLQALQTARPLCLDSGND*FASSTS
Trigger: AGATGTGCTGGATGCAAACAAGTCATTGCCTGAATC...CAGGCAGAGTGGTCTTGCAGTTTGCAGGGCCTGGAGCCCAACTTGAGTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAAAGGAATCTGTGAAATaGTCACTGAGCAGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQKESVK*SLSRSV
Trigger: GACCGACCTGCTCAGTGACAATTTCACAGATTCCTT...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CAGGGCATCAGCCAGAAAGAACTGGACATAGACTCTGGCCTGCTGCTTCTGGATGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: QGISQKELDIDSGLLLLDGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...ATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp CCAGCCTTACTGACTGAGACCATCATAGCTATGCTCTCTGCCTTGCCGCCAACTGTGAATGCAGGTGCCTaGTCCCAATCAGAGGACATA +
Preference number: 5 (lower is better)
Translates to: PALLTETIIAMLSALPPTVNAGA*SQSEDI
Trigger: TATGTCCTCTGATTGGGACAAGGCACCTGCATTCAC...AGTTGGCGGCAAGGCAGAGAGCATAGCTATGATGGTCTCAGTCAGTAAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTGTGAATGCAGGTGCCTaGTCCCAATCAGAGGACATA +
Preference number: 5 (lower is better)
Translates to: RASLLFPQLLRQSQNPGAVNAGA*SQSEDI
Trigger: TATGTCCTCTGATTGGGACAAGGCACCTGCATTCAC...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAATAGGGTCTAGGCATTCATATTaGACTTCCTGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPPVNAGALSQSEDILIGSRHSY*TSCRAQ
Trigger: CTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAGA...CCCTATTAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACAATCGGAGCCTGGGGTTCACGTGAGTCAGGAAAGGGAGCTCTCCACACTGGACACCAGCCAAAGGCATaGGTATCTCCAAAGAATTGT +
Preference number: 5 (lower is better)
Translates to: TIGAWGSRESGKGALHTGHQPKA*VSPKNC
Trigger: ACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTG...TCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGCCTTTCTTACTTCCCTaGACTGACAAACATCTGCCT +
Preference number: 5 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQPFLLP*TDKHLP
Trigger: AGGCAGATGTTTGTCAGTCAAGGGAAGTAAGAAAGG...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTATGGCTCTTGCATCACTaGTCCATTCCTCGGATTTCC +
Preference number: 5 (lower is better)
Translates to: CSGPPVNAGALSQSEDILWLLHH*SIPRIS
Trigger: GGAAATCCGAGGAATGGACAAGTGATGCAAGAGCCA...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS TCA 90 bp TCTAGTAAATCCCAGCAGGCTTTTCCTCCCAGGCTCCCCTGGCTATaGGAACCACCATCCCACTACCATCTTCTTTCCACATCTGAACTC +
Preference number: 5 (lower is better)
Translates to: SSKSQQAFPPRLPWL*EPPSHYHLLSTSEL
Trigger: GAGTTCAGATGTGGAAAGAAGATGGTAGTGGGATGGTGGTTCTCATAGCCAGGGGAGCCTGGGAGGAAAAGCCTGCTGGGATTTACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS GCA 90 bp AGCTCAGGACGCCAGTGTTATCTCTCACATAGAGGCTTCCGTTCCTaGACTCTTGTTCCAAGTCTGCCGATAGGTCTGTTAGTGTCCCTA +
Preference number: 5 (lower is better)
Translates to: SSGRQCYLSHRGFRS*TLVPSLPIGLLVSL
Trigger: TAGGGACACTAACAGACCTATCGGCAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCTATGTGAGAGATAACACTGGCGTCCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTATTTGGTCCAGCCTCTaGGGCCCAGGCCTGGTATGC +
Preference number: 5 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSIWSSL*GPGLVC
Trigger: GCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAAT...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAGGCATGGGGAGTGGCTaGGGGTCAGCCTCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQGMGSG*GSASKR
Trigger: CCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCC...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCACTGACGAGAGAAGCTTaGAAGCAGAACGGCGCCACG +
Preference number: 5 (lower is better)
Translates to: LEVVLVREASVGLLYIHPLTREA*KQNGAT
Trigger: CGTGGCGCCGTTCTGCTTCAAAGCTTCTCTCGTCAG...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGGGCAGGGAACCACTTaGGTCCCGAAGTTGCAGACA +
Preference number: 5 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGGQGTT*VPKLQT
Trigger: TGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GCTCCTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACAGAGGTGTTGAGGGTGTaGCTGAATGAAGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: APGSSPSEGGKCGSSIYTEVLRV*LNEGRV
Trigger: GACCCTGCCTTCATTCAGCAACACCCTCAACACCTC...TGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578537.1
ENST00000643543.1
CDS-3UTR CAA 90 bp TGCTCAGGGCCGCCTGTGAATGCAGGTGCCTTGTCCCAATCAGAGGACATATTAGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAA +
Preference number: 5 (lower is better)
Translates to: CSGPPVNAGALSQSEDILDLSEV*RVLLNE
Trigger: TTCATTCAGCAACACCCTCAACACCTCAGACAGATC...TAATATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTGGAAGTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCACCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LEVVLVREASVGLLYIHPPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...TGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp AATCACAGAACAAGTAGGGAGAGGAGCCAGGACCTAGGCCTTCAGGTTTTCAGCGTGAATGCAGGTGCCTaGTCCCAATCAGAGGACATA +
Preference number: 5 (lower is better)
Translates to: NHRTSRERSQDLGLQVFSVNAGA*SQSEDI
Trigger: TATGTCCTCTGATTGGGACAAGGCACCTGCATTCAC...GCTGAAAACCTGAAGGCCTAGGTCCTGGCTCCTCTCCCTACTTGTTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CTTGGGAAACCTACAGGGCTAACCGTAGCCTGGGGCCCTATAGCACAGTCACCCCTTTACAGACTGATTTaGGTACCATTTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGKPTGLTVAWGPIAQSPLYRLI*VPFLLL
Trigger: CAGCAGAAGAAATGGTACCAAAATCAGTCTGTAAAG...GGGTGACTGTGCTATAGGGCCCCAGGCTACGGTTAGCCCTGTAGGTTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GTAGTCCTAGTGAGGGAGGCAAGTGTGGGTCTTCTATATATACATCCAGGTGAGGCTATGCTCTCTGCCTaGCCGCCAACTCCCCAATTT +
Preference number: 5 (lower is better)
Translates to: VVLVREASVGLLYIHPGEAMLSA*PPTPQF
Trigger: AAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGC...CTCACCTGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS-3UTR CAA 90 bp TCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGAGCTTTCTGCCTATGCTATGCTCTCTGCCTaGCCGCCAACTCCCCAATTT +
Preference number: 5 (lower is better)
Translates to: SSYIGSWAMEWCRELSAYAMLSA*PPTPQF
Trigger: AAATTGGGGAGTTGGCGGCAAGGCAGAGAGCATAGC...ATAGGCAGAAAGCTCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp CTAGGCCTTCAGGTTTTCAGCAAGGAAGGACTCTCAGGCCATCCTTGCAGTTCACCGAATGATGCTTTCTaGGACTCTGTTCACATGGCC +
Preference number: 5 (lower is better)
Translates to: LGLQVFSKEGLSGHPCSSPNDAF*DSVHMA
Trigger: GGCCATGTGAACAGAGTCCAAGAAAGCATCATTCGG...TGAACTGCAAGGATGGCCTGAGAGTCCTTCCTTGCTGAAAACCTGAAGGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTCGTGATCCGCCCACCTaGGCCTCCCAAAGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIRDPPT*ASQSAG
Trigger: CCCAGCGCTTTGGGAGGCCAAGGTGGGCGGATCACG...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS TCA 90 bp GTACTGGCTGGGCACAAATGGCAGACTGATATATGGAAACCTGTATaGAAGAGAAGGGGTCGCTGCAGCAAAGTTAAGCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: VLAGHKWQTDIWKPV*KRRGRCSKVKQGCT
Trigger: TGTGCACCCCTGCTTAACTTTGCTGCAGCGACCCCTTCTCTTTCATACAGGTTTCCATATATCAGTCTGCCATTTGTGCCCAGCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS GCA 90 bp GCCATACAAGTCTCCCAGAAGTTGTTGATTGACATGTGTCACTTCTaGATCTCTAGTAAATCCCAGCAGGCTTTTCCTCCCAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: AIQVSQKLLIDMCHF*ISSKSQQAFPPRLP
Trigger: GGGGAGCCTGGGAGGAAAAGCCTGCTGGGATTTACTAGAGATGCAGAAGTGACACATGTCAATCAACAACTTCTGGGAGACTTGTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS CCA 90 bp CCTTCCCTGGGACAACCAGACAGTCTTCACACAATCAATTACCAATaGAGTCAACTGGACATTAGGCTCCTTGACAGCTGGACACAGGGT +
Preference number: 5 (lower is better)
Translates to: PSLGQPDSLHTINYQ*SQLDIRLLDSWTQG
Trigger: ACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGTCTGGTTGTCCCAGGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GAGGAAGCAAGGATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGACTTTGGTCCCGAAGTaGCAGACAACCTTTATGAGA +
Preference number: 5 (lower is better)
Translates to: EEARIPRELEYSDSRIERTLVPK*QTTFMR
Trigger: TCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGT...CCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp TTACTCCTTACCCTGACATCCCGCTGGTGGAGAGGGATGGAGGTAACTGCAAGTCACCAGCCAAAGGCATaGGTATCTCCAAAGAATTGT +
Preference number: 5 (lower is better)
Translates to: LLLTLTSRWWRGMEVTASHQPKA*VSPKNC
Trigger: ACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTG...ACTTGCAGTTACCTCCATCCCTCTCCACCAGCGGGATGTCAGGGTAAGGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp ACCAGGATCCCTAGCGACTCCCGAATGATGCTTTCTTGGACTCTGTTCACATGGATCACGCTGTTTCAATaGAATAAAGGCACCGCTGGG +
Preference number: 5 (lower is better)
Translates to: TRIPSDSRMMLSWTLFTWITLFQ*NKGTAG
Trigger: CCCAGCGGTGCCTTTATTCAATTGAAACAGCGTGAT...CCATGTGAACAGAGTCCAAGAAAGCATCATTCGGGAGTCGCTAGGGATCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GACTCCTCCCTCCAAGCCTTCGGGAGCGCTAGTGATTCAGGGAATAGGAAGCAGATTCCTTCAAGCCATTaGCTCATCTTACATTGGTTC +
Preference number: 5 (lower is better)
Translates to: DSSLQAFGSASDSGNRKQIPSSH*LILHWF
Trigger: GAACCAATGTAAGATGAGCAAATGGCTTGAAGGAAT...CTGCTTCCTATTCCCTGAATCACTAGCGCTCCCGAAGGCTTGGAGGGAGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp TTCCTGTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGAAAGGGGAACGTGCCTaGTTCATTTGGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: FLLPQFCQGRLAPEHQRRKGERA*FIWFCT
Trigger: TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTT...CCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS CCA 90 bp CCACCTCCCCGTTTGTTTCCTCAGAGACTTAATTGCCTTGATCCTTaGACACCATTCTTGTCAGGATCTGAGGCATCTGATCTCCACCTT +
Preference number: 5 (lower is better)
Translates to: PPPRLFPQRLNCLDP*TPFLSGSEASDLHL
Trigger: AAGGTGGAGATCAGATGCCTCAGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTGAGGAAACAAACGGGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS-3UTR CAA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTCTTTCTGGATCCTTCTaGTCCTCCGAGTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSLSGSF*SSELLG
Trigger: GCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAG...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACAGTGCCGTTAGTGCTGAAAGGGGAACGTGCCTTGTTCATTTGGTTCTGCACATCTTCAAGGATCTCATaGTGTGCATTCCGAACAGGG +
Preference number: 5 (lower is better)
Translates to: TVPLVLKGERALFIWFCTSSRIS*CAFRTG
Trigger: CCCTGTTCGGAATGCACACAATGAGATCCTTGAAGA...TGTGCAGAACCAAATGAACAAGGCACGTTCCCCTTTCAGCACTAACGGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp GTTAGAGAACCACCTTTTAGAGTGGCGATCTCATGGGAGTGGCAGCTTGACTCTGATCTGTCTGAGGTGTaGAGGGTGTTGCTGAATGAA +
Preference number: 5 (lower is better)
Translates to: VREPPFRVAISWEWQLDSDLSEV*RVLLNE
Trigger: TTCATTCAGCAACACCCTCAACACCTCAGACAGATC...AGAGTCAAGCTGCCACTCCCATGAGATCGCCACTCTAAAAGGTGGTTCTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACCTGTTGCCACAATTTaGCCAAGGCAGGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQPVATI*PRQAGT
Trigger: GGTGCCAGCCTGCCTTGGCAAAATTGTGGCAACAGG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAAGGTATCTCCAAAGAATaGTTCCTAGATCCCCTAATT +
Preference number: 5 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQGISKE*FLDPLI
Trigger: AATTAGGGGATCTAGGAACAATTCTTTGGAGATACC...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AGAGGGCTTCATTGCAGGTCAATAGGCCTGTCACCATCACCCCACAGCGAGCAACACAGATCCTATTTCTaGCCTTATCTCTGGCATTTA +
Preference number: 5 (lower is better)
Translates to: RGLHCRSIGLSPSPHSEQHRSYF*PYLWHL
Trigger: TAAATGCCAGAGATAAGGCAAGAAATAGGATCTGTG...TTGCTCGCTGTGGGGTGATGGTGACAGGCCTATTGACCTGCAATGAAGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS TCA 90 bp CAGGGCAGGGAACCACTTTGGTCCCGAAGTTGCAGACAACCTTTATaGGATGAAGCCACCAGAACCCCAAGTAAAACTTTATATGCACTG +
Preference number: 5 (lower is better)
Translates to: QGREPLWSRSCRQPL*DEATRTPSKTLYAL
Trigger: CAGTGCATATAAAGTTTTACTTGGGGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581671.2
CDS CCA 90 bp ATCAATTACCAATGGAGTCAACTGGACATTAGGCTCCTTGACAGCTaGACACAGGGTCTTTTGGATGAAGACCTGAGCATCCTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: INYQWSQLDIRLLDS*TQGLLDEDLSILKP
Trigger: TGGCTTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AAGAAGGGAAATTATAGTGGAGTAGCAGTTTGTGAATCTGGAGTCCTTGGTTCAATCCTCAAGCCAGGCTaGTTCGGAGGAAGGGACCTG +
Preference number: 5 (lower is better)
Translates to: KKGNYSGVAVCESGVLGSILKPG*FGGRDL
Trigger: CAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGAT...TGAACCAAGGACTCCAGATTCACAAACTGCTACTCCACTATAATTTCCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp CATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTGTACGGTTGTGATTTTCTTGTCCTCCGAGTaGCTGGGCATGGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: HWYLQRIVPRSPNCTVVIFLSSE*LGMGSG
Trigger: GCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAA...AATCACAACCGTACAATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAACAGCGAGCAAGTCTTTaGTTCCCTCAGCTCCTGCGA +
Preference number: 5 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQQRASL*FPQLLR
Trigger: TCGCAGGAGCTGAGGGAACAAAAGACTTGCTCGCTG...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATCCCCAGAGAGCTGGAGTACTCTGACTCTCGGATAGAAAGGCAGGACAATCGGCTTTACAGACTGATTTaGGTACCATTTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: IPRELEYSDSRIERQDNRLYRLI*VPFLLL
Trigger: CAGCAGAAGAAATGGTACCAAAATCAGTCTGTAAAG...CCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449476.7
ENST00000643543.1
CDS-3UTR CAA 90 bp CGAGCAAGTCTTTTGTTCCCTCAGCTCCTGCGACAAAGTCAGAACCCAGGTGCTCTTTACAGACTGATTTaGGTACCATTTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RASLLFPQLLRQSQNPGALYRLI*VPFLLL
Trigger: CAGCAGAAGAAATGGTACCAAAATCAGTCTGTAAAG...AGCACCTGGGTTCTGACTTTGTCGCAGGAGCTGAGGGAACAAAAGACTTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGATCTAGGCATTCATATTaGACTTCCTGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGSRHSY*TSCRAQ
Trigger: CTGGGCCCTGCAGGAAGTCAAATATGAATGCCTAGA...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS CCA 90 bp GACAACCAGACAGTCTTCACACAATCAATTACCAATGGAGTCAACTaGACATTAGGCTCCTTGACAGCTGGACACAGGGTCTTTTGGATG +
Preference number: 5 (lower is better)
Translates to: DNQTVFTQSITNGVN*TLGSLTAGHRVFWM
Trigger: CATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGTCTGGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGCCATGATTTCCTGTaGCCACAATTTTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSGHDFL*PQFCQG
Trigger: GCCTTGGCAAAATTGTGGCAACAGGAAATCATGGCC...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581729.1
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp AATTGTACGGTTGTGATTTCGGAGCACCTTCTGGTCTCAAGGTATATCGATCAAAAAAAGACGCGGCGGTaGCACGTGAACCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: NCTVVISEHLLVSRYIDQKKTRR*HVNLPF
Trigger: GAAAGGAAGGTTCACGTGCAACCGCCGCGTCTTTTT...TTGATCGATATACCTTGAGACCAGAAGGTGCTCCGAAATCACAACCGTACAATT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS-3UTR CAA 90 bp TTAGATTCCACTTCTCCCTGTTCTTACAGTGCCGTTAGTGCTGAAAGGGGAACGTTTGCTCATCTTACATaGGTTCGTGGGCCATGGAAT +
Preference number: 5 (lower is better)
Translates to: LDSTSPCSYSAVSAERGTFAHLT*VRGPWN
Trigger: ATTCCATGGCCCACGAACCAATGTAAGATGAGCAAA...CGTTCCCCTTTCAGCACTAACGGCACTGTAAGAACAGGGAGAAGTGGAATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS CCA 90 bp GGTCAGGGAAATACACTGAGAATGGAGGCACAAGAAAGCACAGAGTaGAGACAGTCAGATTCAAGGCAGAAAATGGAGCTAAAGTATCTG +
Preference number: 5 (lower is better)
Translates to: GQGNTLRMEAQESTE*RQSDSRQKMELKYL
Trigger: CAGATACTTTAGCTCCATTTTCTGCCTTGAATCTGACTGTCTCCACTCTGTGCTTTCTTGTGCCTCCATTCTCAGTGTATTTCCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584439.1
CDS-3UTR CAA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAACTTTGGTCCCGAAGTaGCAGACAACCTTTATGAGA +
Preference number: 5 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGTLVPK*QTTFMR
Trigger: TCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGT...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp GTTGCCACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATGGTATCTCCAAAGAATaGTTCCTAGATCCCCTAATT +
Preference number: 5 (lower is better)
Translates to: VATILPRQAGTRTPKKGNGISKE*FLDPLI
Trigger: AATTAGGGGATCTAGGAACAATTCTTTGGAGATACC...ATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGTGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACACCAGCCAAAGGCATTGGTATCTCCAAAGAATTGTTCCTAGATCCCCTAATTTCTTCAAGGATCTCATaGTGTGCATTCCGAACAGGG +
Preference number: 5 (lower is better)
Translates to: TPAKGIGISKELFLDPLISSRIS*CAFRTG
Trigger: CCCTGTTCGGAATGCACACAATGAGATCCTTGAAGA...AATTAGGGGATCTAGGAACAATTCTTTGGAGATACCAATGCCTTTGGCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ACAATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGATTCAGGCAATGACTaGTTTGCATCCAGCACATCT +
Preference number: 5 (lower is better)
Translates to: TILPRQAGTRTPKKGNYSDSGND*FASSTS
Trigger: AGATGTGCTGGATGCAAACAAGTCATTGCCTGAATC...ACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp ATTTTGCCAAGGCAGGCTGGCACCAGAACACCAAAGAAGGGAAATTATAGTGGAGGTATCTCCAAAGAATaGTTCCTAGATCCCCTAATT +
Preference number: 5 (lower is better)
Translates to: ILPRQAGTRTPKKGNYSGGISKE*FLDPLI
Trigger: AATTAGGGGATCTAGGAACAATTCTTTGGAGATACC...TCCACTATAATTTCCCTTCTTTGGTGTTCTGGTGCCAGCCTGCCTTGGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS-3UTR CAA 90 bp TCAAGCCATTTGCTCATCTTACATTGGTTCGTGGGCCATGGAATGGTGTCGAGACTTTCTAGAACTAATTaGGTAACTCAACTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSHLLILHWFVGHGMVSRLSRTN*VTQLAL
Trigger: AAGAGCCAGTTGAGTTACCAAATTAGTTCTAGAAAG...TCTCGACACCATTCCATGGCCCACGAACCAATGTAAGATGAGCAAATGGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651323.1
CDS CCA 72 bp TCTCGGGGCAGGGGGTTCCCATTTGGTCCAGCCTCTTaGGCCCAGGCCTGGTATGCACTACTGCTCCACGAC +
Preference number: 6 (lower is better)
Translates to: SRGRGFPFGPAS*AQAWYALLLHD
Trigger: GTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CAA 72 bp CTCTCGGGGCAGGGGGTTCCCATTTGGTCCAGCCTCTaGGGCCCAGGCCTGGTATGCACTACTGCTCCACGA +
Preference number: 6 (lower is better)
Translates to: LSGQGVPIWSSL*GPGLVCTTAPR
Trigger: TCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS GCA 72 bp CCCATTTGGTCCAGCCTCTTGGGCCCAGGCCTGGTATaGACTACTGCTCCACGACAGGTGGCTGCAGCATGG +
Preference number: 6 (lower is better)
Translates to: PIWSSLLGPGLV*TTAPRQVAAAW
Trigger: CCATGCTGCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS GCA 72 bp GGAAACACTGGCACAGGGGCATCCCACAGCTCCAAGTaGCCTTCCCCTGAGGAATTCCACCTGGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GNTGTGASHSSK*PSPEEFHLAGG
Trigger: CCCTCCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGATGCCCCTGTGCCAGTGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp GGGTTCCCATTTGGTCCAGCCTCTTGGGCCCAGGCCTaGTATGCACTACTGCTCCACGACAGGTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GFPFGPASWAQA*YALLLHDRWLQ
Trigger: CTGCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp CGTGACGGGGCCAGGACTGATGGTCAAAGGAAACACTaGCACAGGGGCATCCCACAGCTCCAAGTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: RDGARTDGQRKH*HRGIPQLQVPF
Trigger: GAAGGGCACTTGGAGCTGTGGGATGCCCCTGTGCCAGTGTTTCCTTTGACCATCAGTCCTGGCCCCGTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp CTTGTTTCTGAGCCTGAGCAGGCAGGAAGCACTCTCTaGGTAGAGGACAGGGATAGGCGTGACGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LVSEPEQAGSTL*VEDRDRRDGAR
Trigger: CCTGGCCCCGTCACGCCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGCCTGCTCAGGCTCAGAAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp ACCAGCTGGGCAGGGACCTGCACGATGATGGACACGTaGGTGACAGCTGGGTGTGATCTACCAAGAGACAGG +
Preference number: 6 (lower is better)
Translates to: TSWAGTCTMMDT*VTAGCDLPRDR
Trigger: CCTGTCTCTTGGTAGATCACACCCAGCTGTCACCCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS TCA 72 bp GGGAAGCTGCTTCTCACGTCCCTCTCTACGATCAACTaGAACCTCTCTGCCCGCACCAGGCAGCCTAGAGGA +
Preference number: 6 (lower is better)
Translates to: GKLLLTSLSTIN*NLSARTRQPRG
Trigger: TCCTCTAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS GCA 72 bp GTGTGTCCCATGGGCCCCAGGTGTCCTCCAGTGTTCTaGCACCATCCTTCCCCCACATCCTCATACTTTCTG +
Preference number: 6 (lower is better)
Translates to: VCPMGPRCPPVF*HHPSPTSSYFL
Trigger: CAGAAAGTATGAGGATGTGGGGGAAGGATGGTGGCAGAACACTGGAGGACACCTGGGGCCCATGGGACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583254.1
CDS CCA 72 bp ACAGCTCCAAGTGCCCTTCCCCTGAGGAATTCCACCTaGCAGGAGGGAGGTAACTCCAACGGGGGAACAGAA +
Preference number: 6 (lower is better)
Translates to: TAPSALPLRNST*QEGGNSNGGTE
Trigger: TTCTGTTCCCCCGTTGGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTGGAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp TTTCTGGATCCTTCTTGTCCTCCGAGTTGCTGGGCATaGGGAGTGGCTTGGGGTCAGCCTCTAAGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: FLDPSCPPSCWA*GVAWGQPLRGV
Trigger: GACCCCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CAA 72 bp CGGACAAGACTTTCTGGATCCTTCTTGTCCTCCGAGTaGCTGGGCATGGGGAGTGGCTTGGGGTCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: RTRLSGSFLSSE*LGMGSGLGSAS
Trigger: AGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS TCA 72 bp GGAAGACTAGGAGGAGGACCAGCCTGCAACACCTCGTaGGGGTACTGGCTGGGCACAAATGGCAGACTGATA +
Preference number: 6 (lower is better)
Translates to: GRLGGGPACNTS*GYWLGTNGRLI
Trigger: TATCAGTCTGCCATTTGTGCCCAGCCAGTACCCTCACGAGGTGTTGCAGGCTGGTCCTCCTCCTAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CCA 72 bp CAGGACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGTAGTCCTTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: QDLETLFSNWLK*TRAPGSSPSHG
Trigger: GCCATGAGAAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 72 bp GCCTGTTCCTTCCCTCCCTTACCTGCCGGCAGATGCTaGTACAATAAGCACACACCCAGAAGAGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: ACSFPPLPAGRC*YNKHTPRRAEG
Trigger: GCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGTAAGGGAGGGAAGGAACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 72 bp GCTCGTCAACCCTGGCTGAAGACTGCCGGCAGATGCTaGTACAATAAGCACACACCCAGAAGAGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: ARQPWLKTAGRC*YNKHTPRRAEG
Trigger: GCCTTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGTCTTCAGCCAGGGTTGACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581729.1
CDS CCA 72 bp GGAGCAGGTGAACATCCTGGAGCGGACAAGACTTTCTaGATCCTTCTTGTCCTCCGAGTTGCTGGGCATGGG +
Preference number: 6 (lower is better)
Translates to: GAGEHPGADKTF*ILLVLRVAGHG
Trigger: CCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGCTCCAGGATGTTCACCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS TCA 72 bp CACCAAGGAATCTGTGAAAAGCGGGGCCAGGAGCTATaGGTCGGTACACCTGTCCCGGGTGCAAGAACTCAA +
Preference number: 6 (lower is better)
Translates to: HQGICEKRGQEL*VGTPVPGARTQ
Trigger: TTGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTTTTCACAGATTCCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578537.1
CDS TCA 72 bp GCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTGGGATaGAGACAGTGGTTGGAAAAGTCCTCTTGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: ASGAQASALSLG*RQWLEKSSWSH
Trigger: ATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS GCA 72 bp GCACTCAATCGAACTAGACTCCCAGCCAGGTTTCGCTaGACACCTCTGAGCTTGTTTCTGAGCCTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: ALNRTRLPARFR*TPLSLFLSLSR
Trigger: CCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGGGAGTCTAGTTCGATTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp CAAGACTTTCTGGATCCTTCTTGTCCTCCGAGTTGCTaGGCATGGGGAGTGGCTTGGGGTCAGCCTCTAAGA +
Preference number: 6 (lower is better)
Translates to: QDFLDPSCPPSC*AWGVAWGQPLR
Trigger: TCTTAGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp CTTCACCTGGAAACCCTTTTCTCCAACTGGCTGAAGTaGACCCGGGCTCCTGGAAGTAGTCCTAGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: LHLETLFSNWLK*TRAPGSSPSEG
Trigger: TCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578240.1
ENST00000584439.1
CDS CCA 72 bp GTAGGGCAAGTGGAGCCCAGGCGAGTGCACTTTCCCTaGGATGAAGACAGTGGTTGGAAAAGTCCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: VGQVEPRRVHFP*DEDSGWKSPLG
Trigger: ACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCTGGGCTCCACTTGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CAA 72 bp AACATCCTGGAGCGGACAAGACTTTCTGGATCCTTCTaGTCCTCCGAGTTGCTGGGCATGGGGAGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: NILERTRLSGSF*SSELLGMGSGL
Trigger: CAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGCTCCAGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643543.1
CDS TCA 72 bp TTGACAGCTGGACACAGGGTCTTTTGGATGAAGACCTaGGCATCCTCAAGCCAGGCTTGTTCGGAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: LTAGHRVFWMKT*ASSSQACSEEG
Trigger: CCCTTCCTCCGAACAAGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000643543.1
ENST00000651323.1
CDS TCA 72 bp AAACTCAGGACCTGGAAACCCTTTTCTCCAACTGGCTaGAGTGGACCCGGGCTCCTGGAAGTAGTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: KLRTWKPFSPTG*SGPGLLEVVLL
Trigger: GAGAAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGGTCCTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS GCA 72 bp TCAGCCTGTTCCTTCCCTCCCTTACCTGCCGGCAGATaGTGGTACAATAAGCACACACCCAGAAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: SACSFPPLPAGR*WYNKHTPRRAE
Trigger: TTCAGCTCTTCTGGGTGTGTGCTTATTGTACCAGCATCTGCCGGCAGGTAAGGGAGGGAAGGAACAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 72 bp TGGTCATCCAAACATGCTGGCGCTGACCACGGATCTTaGACACTCGCAGTTCTGTCAGCACATAGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: WSSKHAGADHGS*TLAVLSAHRLY
Trigger: GTACAGCCTATGTGCTGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTGGATGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp ATTCTGGTTTCAGCAGCAACAGACGGGAGGACTGACTaGTCATCCAAACATGCTGGCGCTGACCACGGATCT +
Preference number: 6 (lower is better)
Translates to: ILVSAATDGRTD*SSKHAGADHGS
Trigger: AGATCCGTGGTCAGCGCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTTGCTGCTGAAACCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp AGGCGAGTGCACTTTCCCTGGGATGAAGACAGTGGTTaGAAAAGTCCTCTTGGTCCCATCACATCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: RRVHFPWDEDSG*KSPLGPITSLW
Trigger: CCAGAGGGATGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CCA 72 bp CTTCTTTCCACATCTGAACTCCAAACCTATCAGCCGTaGGTCACTGAGGGGTTGAGAGTGCTTGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LLSTSELQTYQP*VTEGLRVLGQE
Trigger: CTCCTGGCCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGATAGGTTTGGAGTTCAGATGTGGAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS GCA 72 bp TCTGTTTTGACAAGAAAGGAGACCTGTGGGGTGGGTTaGAAGGCAAACCATCCTACCGGCCTCACTACCCAT +
Preference number: 6 (lower is better)
Translates to: SVLTRKETCGVG*KANHPTGLTTH
Trigger: ATGGGTAGTGAGGCCGGTAGGATGGTTTGCCTTGCAACCCACCCCACAGGTCTCCTTTCTTGTCAAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS GCA 72 bp AAGAGAAGGGGTCGCTGCAGCAAAGTTAAGCAGGGGTaGACATTCCAGAGAGCCACATCAGTAGCAAGAGGA +
Preference number: 6 (lower is better)
Translates to: KRRGRCSKVKQG*TFQRATSVARG
Trigger: TCCTCTTGCTACTGATGTGGCTCTCTGGAATGTGCACCCCTGCTTAACTTTGCTGCAGCGACCCCTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CCA 72 bp GGTTGGAAAAGTCCTCTTGGTCCCATCACATCCCTCTaGCACTCCATACTCAGTTCAGCCTGTTCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GWKSPLGPITSL*HSILSSACSFP
Trigger: AGGGAAGGAACAGGCTGAACTGAGTATGGAGTGCCAGAGGGATGTGATGGGACCAAGAGGACTTTTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS CAA 72 bp AGTCTAGAATACCGGACAAGACTTTCTGGATCCTTCTaGTCCTCCGAGTTGCTGGGCATGGGGAGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLEYRTRLSGSF*SSELLGMGSGL
Trigger: CAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGGTATTCTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000651323.1
CDS CAA 72 bp TTCTGTTTTGACAAGAAAGGAGACCTGTGGGGTGGGTaGCAAGGCAAACCATCCTACCGGCCTCACTACCCA +
Preference number: 6 (lower is better)
Translates to: FCFDKKGDLWGG*QGKPSYRPHYP
Trigger: TGGGTAGTGAGGCCGGTAGGATGGTTTGCCTTGCAACCCACCCCACAGGTCTCCTTTCTTGTCAAAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CAA 90 bp CTCTCTGCCCGCACCAGGCAGCCTAGAGGAAGAAAGTTTTCTGTTTaGACAAGAAAGGAGACCTGTGGGGTGGGTTGCAAGGCAAACCAT +
Preference number: 6 (lower is better)
Translates to: LSARTRQPRGRKFSV*TRKETCGVGCKANH
Trigger: ATGGTTTGCCTTGCAACCCACCCCACAGGTCTCCTTTCTTGTCAAAACAGAAAACTTTCTTCCTCTAGGCTGCCTGGTGCGGGCAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CAA 90 bp GAGTGCACTTTCCCTGGGATGAAGACAGTGGTTGGAAAAGTCCTCTaGGTCCCATCACATCCCTCTGGCACTCCATACTCAGTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: ECTFPGMKTVVGKVL*VPSHPSGTPYSVQP
Trigger: AGGCTGAACTGAGTATGGAGTGCCAGAGGGATGTGATGGGACCAAGAGGACTTTTCCAACCACTGTCTTCATCCCAGGGAAAGTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578441.5
CDS TCA 72 bp CCTCGTGAGGGTACTGGCTGGGCACAAATGGCAGACTaGTATATGGAAACCTGTATGAAAGAGAAGGGGTCG +
Preference number: 6 (lower is better)
Translates to: PREGTGWAQMAD*YMETCMKEKGS
Trigger: CGACCCCTTCTCTTTCATACAGGTTTCCATATATCAGTCTGCCATTTGTGCCCAGCCAGTACCCTCACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS CAA 72 bp CGCACCAGGCAGCCTAGAGGAAGAAAGTTTTCTGTTTaGACAAGAAAGGAGACCTGTGGGGTGGGTTGCAAG +
Preference number: 6 (lower is better)
Translates to: RTRQPRGRKFSV*TRKETCGVGCK
Trigger: CTTGCAACCCACCCCACAGGTCTCCTTTCTTGTCAAAACAGAAAACTTTCTTCCTCTAGGCTGCCTGGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578240.1
CDS GCA 72 bp CGCCAGTGTTATCTCTCACATAGAGGCTTCCGTTCCTaGACTCTTGTTCCAAGTCTGCCGATAGGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: RQCYLSHRGFRS*TLVPSLPIGLL
Trigger: TAACAGACCTATCGGCAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCTATGTGAGAGATAACACTGGCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449476.7
ENST00000581671.2
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp CTAAGAGTAACAGGGCCTATGGGAAAAAGAGGGTTGTaGCAGATCATTCAAAACCCGCACAAGGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: LRVTGPMGKRGL*QIIQNPHKVAH
Trigger: GTGAGCCACCTTGTGCGGGTTTTGAATGATCTGCCACAACCCTCTTTTTCCCATAGGCCCTGTTACTCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584439.1
CDS GCA 72 bp CACCCACCTCCCCGTTTGTTTCCTCAGAGACTTAATTaGCTTGATCCTTGGACACCATTCTTGTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: HPPPRLFPQRLN*LDPWTPFLSGS
Trigger: AGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTGAGGAAACAAACGGGGAGGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS CAA 72 bp CACCTCCCCGTTTGTTTCCTCAGAGACTTAATTGCCTaGATCCTTGGACACCATTCTTGTCAGGATCTGAGG +
Preference number: 6 (lower is better)
Translates to: HLPVCFLRDLIA*ILGHHSCQDLR
Trigger: CCTCAGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTGAGGAAACAAACGGGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS CAA 72 bp ACACTAAGAGTAACAGGGCCTATGGGAAAAAGAGGGTaGTGGCAGATCATTCAAAACCCGCACAAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: TLRVTGPMGKRG*WQIIQNPHKVA
Trigger: AGCCACCTTGTGCGGGTTTTGAATGATCTGCCACAACCCTCTTTTTCCCATAGGCCCTGTTACTCTTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584439.1
CDS CAA 90 bp TTGTTTCCTCAGAGACTTAATTGCCTTGATCCTTGGACACCATTCTaGTCAGGATCTGAGGCATCTGATCTCCACCTTCCACTCACCTCA +
Preference number: 6 (lower is better)
Translates to: LFPQRLNCLDPWTPF*SGSEASDLHLPLTS
Trigger: TGAGGTGAGTGGAAGGTGGAGATCAGATGCCTCAGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTGAGGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS GCA 72 bp GTCTCCCAGAAGTTGTTGATTGACATGTGTCACTTCTaGATCTCTAGTAAATCCCAGCAGGCTTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: VSQKLLIDMCHF*ISSKSQQAFPP
Trigger: GGGAGGAAAAGCCTGCTGGGATTTACTAGAGATGCAGAAGTGACACATGTCAATCAACAACTTCTGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS CCA 72 bp ACAGTCTTCACACAATCAATTACCAATGGAGTCAACTaGACATTAGGCTCCTTGACAGCTGGACACAGGGTC +
Preference number: 6 (lower is better)
Translates to: TVFTQSITNGVN*TLGSLTAGHRV
Trigger: GACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CCA 72 bp GGACAACCAGACAGTCTTCACACAATCAATTACCAATaGAGTCAACTGGACATTAGGCTCCTTGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: GQPDSLHTINYQ*SQLDIRLLDSW
Trigger: CCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGTCTGGTTGTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CAA 72 bp TCAATTACCAATGGAGTCAACTGGACATTAGGCTCCTaGACAGCTGGACACAGGGTCTTTTGGATGAAGACC +
Preference number: 6 (lower is better)
Translates to: SITNGVNWTLGS*TAGHRVFWMKT
Trigger: GGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449476.7
ENST00000584842.1
ENST00000643543.1
ENST00000651323.1
CDS CAA 72 bp CAGAGACTTAATTGCCTTGATCCTTGGACACCATTCTaGTCAGGATCTGAGGCATCTGATCTCCACCTTCCA +
Preference number: 6 (lower is better)
Translates to: QRLNCLDPWTPF*SGSEASDLHLP
Trigger: TGGAAGGTGGAGATCAGATGCCTCAGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS CAA 72 bp TCCTGTTCTCTGCCTGCCATACAAGTCTCCCAGAAGTaGTTGATTGACATGTGTCACTTCTGCATCTCTAGT +
Preference number: 6 (lower is better)
Translates to: SCSLPAIQVSQK*LIDMCHFCISS
Trigger: ACTAGAGATGCAGAAGTGACACATGTCAATCAACAACTTCTGGGAGACTTGTATGGCAGGCAGAGAACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581967.1
CDS CCA 72 bp CGTTTGTTTCCTCAGAGACTTAATTGCCTTGATCCTTaGACACCATTCTTGTCAGGATCTGAGGCATCTGAT +
Preference number: 6 (lower is better)
Translates to: RLFPQRLNCLDP*TPFLSGSEASD
Trigger: ATCAGATGCCTCAGATCCTGACAAGAATGGTGTCCAAGGATCAAGGCAATTAAGTCTCTGAGGAAACAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584842.1
CDS TCA 72 bp GTTCTCTGCCTGCCATACAAGTCTCCCAGAAGTTGTTaGTTGACATGTGTCACTTCTGCATCTCTAGTAAAT +
Preference number: 6 (lower is better)
Translates to: VLCLPYKSPRSC*LTCVTSASLVN
Trigger: ATTTACTAGAGATGCAGAAGTGACACATGTCAATCAACAACTTCTGGGAGACTTGTATGGCAGGCAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581967.1