Pregenerated sensors for CT75 (Homo sapiens)
Ensembl gene IDs: ENSG00000237732Ensembl transcript IDs: ENST00000424010.1, ENST00000429475.5, ENST00000439237.1, ENST00000446532.1, ENST00000555502.5, ENST00000587192.1, ENST00000589724.1, ENST00000590427.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCCCGCCGGCACAGCGCGGGCGTGCCCGGAGCTCAGGCAGCAGCTaGGCGCGATGGGGCAGGTGCACGGCGCGCGTGCGCGATCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SPPAQRGRARSSGSS*ARWGRCTARVRDRS Trigger: GCTCCGATCGCGCACGCGCGCCGTGCACCTGCCCCATCGCGCCCAGCTGCTGCCTGAGCTCCGGGCACGCCCGCGCTGTGCCGGCGGGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS CCA 90 bp | GCCGGGCCACGCCGCGGAACCGGCGCCTGCACCTCCAGCCCCGCGTaGCGGGAGAAGAGGGGGCCTCTGGCTCGGTGCGCTCGAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: AGPRRGTGACTSSPA*REKRGPLARCARAS Trigger: AGAAGCTCGAGCGCACCGAGCCAGAGGCCCCCTCTTCTCCCGCCACGCGGGGCTGGAGGTGCAGGCGCCGGTTCCGCGGCGTGGCCCGGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 90 bp | GCGGAGGAGCGACACATAGCCGGGCCACGCCGCGGAACCGGCGCCTaGACCTCCAGCCCCGCGTGGCGGGAGAAGAGGGGGCCTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: AEERHIAGPRRGTGA*TSSPAWREKRGPLA Trigger: AGCCAGAGGCCCCCTCTTCTCCCGCCACGCGGGGCTGGAGGTGCAGGCGCCGGTTCCGCGGCGTGGCCCGGCTATGTGTCGCTCCTCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | GCGCCTGCACCTCCAGCCCCGCGTGGCGGGAGAAGAGGGGGCCTCTaGCTCGGTGCGCTCGAGCTTCTGCACCCTCTCCCTGCTGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: APAPPAPRGGRRGGL*LGALELLHPLPAAP Trigger: GGGGGCAGCAGGGAGAGGGTGCAGAAGCTCGAGCGCACCGAGCCAGAGGCCCCCTCTTCTCCCGCCACGCGGGGCTGGAGGTGCAGGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | CCCCTGGCGAGGCACCGGCCACCGGGTCGCCCTCGCCCTCGCCCGTaGGGCCCATCTGCCTGTCGGTGGCCAGCATCCTGGCACTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLARHRPPGRPRPRP*GPSACRWPASWHSS Trigger: AGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCGAGGGCGACCCGGTGGCCGGTGCCTCGCCAGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 90 bp | GCACCGGCCACCGGGTCGCCCTCGCCCTCGCCCGTGGGGCCCATCTaGCTGTCGGTGGCCAGCATCCTGGCACTCTTCTCGGTCGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: APATGSPSPSPVGPI*LSVASILALFSVVV Trigger: GACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCGAGGGCGACCCGGTGGCCGGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | CCGGGTCGCCCTCGCCCTCGCCCGTGGGGCCCATCTGCCTGTCGGTaGCCAGCATCCTGGCACTCTTCTCGGTCGTTGTCACCTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PGRPRPRPWGPSACR*PASWHSSRSLSPGS Trigger: TGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCGAGGGCGACCCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 90 bp | GCCAGCATCCTGGCACTCTTCTCGGTCGTTGTCACCTGGGTCATCTaGTGGCTCAAGTATCGGCCCGAGGGTGCGGCCGCGGGCTCGACG | + |
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Preference number: 5 (lower is better) Translates to: ASILALFSVVVTWVI*WLKYRPEGAAAGST Trigger: CGTCGAGCCCGCGGCCGCACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | AGCATCCTGGCACTCTTCTCGGTCGTTGTCACCTGGGTCATCTGCTaGCTCAAGTATCGGCCCGAGGGTGCGGCCGCGGGCTCGACGGGG | + |
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Preference number: 5 (lower is better) Translates to: SILALFSVVVTWVIC*LKYRPEGAAAGSTG Trigger: CCCCGTCGAGCCCGCGGCCGCACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | CGCCCTCGCCCGTGGGGCCCATCTGCCTGTCGGTGGCCAGCATCCTaGCACTCTTCTCGGTCGTTGTCACCTGGGTCATCTGCTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RPRPWGPSACRWPAS*HSSRSLSPGSSAGS Trigger: TGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | CTGTCGGTGGCCAGCATCCTGGCACTCTTCTCGGTCGTTGTCACCTaGGTCATCTGCTGGCTCAAGTATCGGCCCGAGGGTGCGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: LSVASILALFSVVVT*VICWLKYRPEGAAA Trigger: CGCGGCCGCACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 90 bp | CTGGCTGCGTGTGCGTGGTCTTCTCCTTCCTCTCCATGGTGGTGCTaGTCTTCACCGGCCTCATCTTCGTCAACCACTACGGCGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LAACAWSSPSSPWWC*SSPASSSSTTTAAG Trigger: CCCCGCCGCCGTAGTGGTTGACGAAGATGAGGCCGGTGAAGAGCAGCACCACCATGGAGAGGAAGGAGAAGACCACGCACACGCAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS TCA 90 bp | AAAAGGATTTCCTGCTTCCTAGCGGTCCTGGAAAGGGAGAGATCCTaGGCGCTGAGAGTGACGGACACTCCCCGCCGGCACAGCGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: KRISCFLAVLERERS*ALRVTDTPRRHSAG Trigger: GCCCGCGCTGTGCCGGCGGGGAGTGTCCGTCACTCTCAGCGCTCAGGATCTCTCCCTTTCCAGGACCGCTAGGAAGCAGGAAATCCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS TCA 90 bp | TGTCCAAGGGTCAACTGTATTGCAACTCTCTCCCAACTCGGCCACTaGGGAGCCTCGGTTTTCTGTCCCTCGGGCTTCTGTCGCCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: CPRVNCIATLSQLGH*GASVFCPSGFCRPS Trigger: CGAGGGGCGACAGAAGCCCGAGGGACAGAAAACCGAGGCTCCTCAGTGGCCGAGTTGGGAGAGAGTTGCAATACAGTTGACCCTTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590427.1 |
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| CDS CCA 90 bp | CGCCGCCGTTCCGTTTGTACCCTAGATGTGGGCTGCAGGGCTGCCTaGGCTCTGCTAACAAAAGCACAAAGCGTGAATGGCCTGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: RRRSVCTLDVGCRAA*ALLTKAQSVNGLVM Trigger: CATCACCAGGCCATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS GCA 90 bp | GGCCGCCAGGACTTGAGAGTTTCTTTAAAGGTGCAGCTGCGCGCGTaGACACGTGCATCTGTGGCGGCTGTGAATGGACTTGAATTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GRQDLRVSLKVQLRA*TRASVAAVNGLELP Trigger: GGGCAATTCAAGTCCATTCACAGCCGCCACAGATGCACGTGTGCACGCGCGCAGCTGCACCTTTAAAGAAACTCTCAAGTCCTGGCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | ATGTTGTCCAAGGGTCAACTGTATTGCACGCTGGCTGCGTGTGCGTaGTCTTCTCCTTCCTCTCCATGGTGGTGCTGCTCTTCACCGGCC | + |
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Preference number: 5 (lower is better) Translates to: MLSKGQLYCTLAACA*SSPSSPWWCCSSPA Trigger: GGCCGGTGAAGAGCAGCACCACCATGGAGAGGAAGGAGAAGACCACGCACACGCAGCCAGCGTGCAATACAGTTGACCCTTGGACAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS GCA 90 bp | AAAACGCCGCCGTTCCGTTTGTACCCTAGATGTGGGCTGCAGGGCTaGCTGGGCTCTGCTAACAAAAGCACAAAGCGTGAATGGCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: KTPPFRLYPRCGLQG*LGSANKSTKREWPG Trigger: ACCAGGCCATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 90 bp | GCTGCGCGCGTGCACACGTGCATCTGTGGCGGCTGTGAATGGACTTaGATTGCCCGGAGGAAGAATGAATGGGATGTAAACGTGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: AARVHTCICGGCEWT*IARRKNEWDVNVRG Trigger: TCCTCTCACGTTTACATCCCATTCATTCTTCCTCCGGGCAATTCAAGTCCATTCACAGCCGCCACAGATGCACGTGTGCACGCGCGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 90 bp | AAATTGACCTCCGCGTTATGCACCACCCTCGTCCTCGTCAGAATGTaGGGCCATCCCTCCCTAGAGCACAAAGATCTGCAGAGACGAAGC | + |
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Preference number: 5 (lower is better) Translates to: KLTSALCTTLVLVRM*GHPSLEHKDLQRRS Trigger: GCTTCGTCTCTGCAGATCTTTGTGCTCTAGGGAGGGATGGCCGCACATTCTGACGAGGACGAGGGTGGTGCATAACGCGGAGGTCAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 90 bp | TGCTGTCTTCTGCAGAGAAACCTAGATGTGGGCTGCAGGGCTGCCTaGGCTCTGCTAACAAAAGCACAAAGCGTGAATGGCCTGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: CCLLQRNLDVGCRAA*ALLTKAQSVNGLVM Trigger: CATCACCAGGCCATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGTTTCTCTGCAGAAGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424010.1 |
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| CDS GCA 90 bp | ATACAAGGAAAACGCCGCCGTTCCGTTTGTACCCTAGATGTGGGCTaGAGGGCTGCCTGGGCTCTGCTAACAAAAGCACAAAGCGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: IQGKRRRSVCTLDVG*RAAWALLTKAQSVN Trigger: ATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCGTTTTCCTTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 90 bp | CAGGAACTCGGTTTAAGCCGCACTTTGACAGTCTGTGAATCTGTTTaGCAACTTTCTCCCCTCTCTGCCTCTGTGAACGCCTGTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: QELGLSRTLTVCESV*QLSPLSASVNACAP Trigger: TGGTGCACAGGCGTTCACAGAGGCAGAGAGGGGAGAAAGTTGTCAAACAGATTCACAGACTGTCAAAGTGCGGCTTAAACCGAGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 90 bp | AGCTCTCTACATGTGTACGTTAAAAGTTTAAGTGGACGAAGCCAGTaGGGGAGCCCAGGAACTCGGTTTAAGCCGCACTTTGACAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSLHVYVKSLSGRSQ*GSPGTRFKPHFDSL Trigger: CAGACTGTCAAAGTGCGGCTTAAACCGAGTTCCTGGGCTCCCTCACTGGCTTCGTCCACTTAAACTTTTAACGTACACATGTAGAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS GCA 90 bp | TCTCACGAGATCTGTTGGTTTTATAAAGGGAAGTTCCCCCACACATaGTCTCTTGCCTGCTACCATGTGAGACGTGACTTTGCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SHEICWFYKGKFPHT*SLACYHVRRDFAPP Trigger: AGGAGGAGCAAAGTCACGTCTCACATGGTAGCAGGCAAGAGAGCATGTGTGGGGGAACTTCCCTTTATAAAACCAACAGATCTCGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS GCA 90 bp | TGTTGGTTTTATAAAGGGAAGTTCCCCCACACATGCTCTCTTGCCTaGTACCATGTGAGACGTGACTTTGCTCCTCCTTTGCTTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: CWFYKGKFPHTCSLA*YHVRRDFAPPLLSI Trigger: GATGGAAAGCAAAGGAGGAGCAAAGTCACGTCTCACATGGTAGCAGGCAAGAGAGCATGTGTGGGGGAACTTCCCTTTATAAAACCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS CCA 72 bp | GCACAGCGCGGGCGTGCCCGGAGCTCAGGCAGCAGCTaGGCGCGATGGGGCAGGTGCACGGCGCGCGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: AQRGRARSSGSS*ARWGRCTARVR Trigger: GCGCACGCGCGCCGTGCACCTGCCCCATCGCGCCCAGCTGCTGCCTGAGCTCCGGGCACGCCCGCGCTGTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS CCA 72 bp | CGCCGCGGAACCGGCGCCTGCACCTCCAGCCCCGCGTaGCGGGAGAAGAGGGGGCCTCTGGCTCGGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RRGTGACTSSPA*REKRGPLARCA Trigger: AGCGCACCGAGCCAGAGGCCCCCTCTTCTCCCGCCACGCGGGGCTGGAGGTGCAGGCGCCGGTTCCGCGGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | CGACACATAGCCGGGCCACGCCGCGGAACCGGCGCCTaGACCTCCAGCCCCGCGTGGCGGGAGAAGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RHIAGPRRGTGA*TSSPAWREKRG Trigger: CCCCCTCTTCTCCCGCCACGCGGGGCTGGAGGTGCAGGCGCCGGTTCCGCGGCGTGGCCCGGCTATGTGTCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | CGTGCGCGATCGGAGCCGACTCGGAGTGGCCGAGGCTaGGGCGCGCCCAGGGCGGTGGGCCCTGTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RARSEPTRSGRG*GAPRAVGPVAH Trigger: ATGGGCAACAGGGCCCACCGCCCTGGGCGCGCCGCAGCCTCGGCCACTCCGAGTCGGCTCCGATCGCGCACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS GCA 72 bp | GCAGCTGGGCGCGATGGGGCAGGTGCACGGCGCGCGTaGGCGATCGGAGCCGACTCGGAGTGGCCGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AAGRDGAGARRA*AIGADSEWPRL Trigger: CAGCCTCGGCCACTCCGAGTCGGCTCCGATCGCGCACGCGCGCCGTGCACCTGCCCCATCGCGCCCAGCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS GCA 72 bp | ACCGGGTCGCCCTCGCCCTCGCCCGTGGGGCCCATCTaGCTGTCGGTGGCCAGCATCCTGGCACTCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TGSPSPSPVGPI*LSVASILALFS Trigger: CGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCGAGGGCGACCCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 72 bp | CCTCCAGCCCCGCGTGGCGGGAGAAGAGGGGGCCTCTaGCTCGGTGCGCTCGAGCTTCTGCACCCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PPAPRGGRRGGL*LGALELLHPLP Trigger: AGGGAGAGGGTGCAGAAGCTCGAGCGCACCGAGCCAGAGGCCCCCTCTTCTCCCGCCACGCGGGGCTGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 72 bp | CCTCGCCCTCGCCCGTGGGGCCCATCTGCCTGTCGGTaGCCAGCATCCTGGCACTCTTCTCGGTCGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRPRPWGPSACR*PASWHSSRSLS Trigger: TGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGGGCGAGGGCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 72 bp | GCACTCTTCTCGGTCGTTGTCACCTGGGTCATCTGCTaGCTCAAGTATCGGCCCGAGGGTGCGGCCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ALFSVVVTWVIC*LKYRPEGAAAG Trigger: GCCCGCGGCCGCACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | CTGGCACTCTTCTCGGTCGTTGTCACCTGGGTCATCTaGTGGCTCAAGTATCGGCCCGAGGGTGCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LALFSVVVTWVI*WLKYRPEGAAA Trigger: CGCGGCCGCACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS TCA 72 bp | TCCTGCTTCCTAGCGGTCCTGGAAAGGGAGAGATCCTaGGCGCTGAGAGTGACGGACACTCCCCGCCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SCFLAVLERERS*ALRVTDTPRRH Trigger: GTGCCGGCGGGGAGTGTCCGTCACTCTCAGCGCTCAGGATCTCTCCCTTTCCAGGACCGCTAGGAAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587192.1 |
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| CDS CCA 72 bp | CCGTGGGGCCCATCTGCCTGTCGGTGGCCAGCATCCTaGCACTCTTCTCGGTCGTTGTCACCTGGGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PWGPSACRWPAS*HSSRSLSPGSS Trigger: AGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGGGCCCCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CAA 90 bp | CCATCTGCCTGTCGGTGGCCAGCATCCTGGCACTCTTCTCGGTCGTaGTCACCTGGGTCATCTGCTGGCTCAAGTATCGGCCCGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSACRWPASWHSSRS*SPGSSAGSSIGPRV Trigger: CACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACAGGCAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 72 bp | GCCAGCATCCTGGCACTCTTCTCGGTCGTTGTCACCTaGGTCATCTGCTGGCTCAAGTATCGGCCCGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: ASILALFSVVVT*VICWLKYRPEG Trigger: ACCCTCGGGCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CAA 72 bp | TGTCGGTGGCCAGCATCCTGGCACTCTTCTCGGTCGTaGTCACCTGGGTCATCTGCTGGCTCAAGTATCGGC | + |
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Preference number: 6 (lower is better) Translates to: CRWPASWHSSRS*SPGSSAGSSIG Trigger: GCCGATACTTGAGCCAGCAGATGACCCAGGTGACAACGACCGAGAAGAGTGCCAGGATGCTGGCCACCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | TCCGCGTTATGCACCACCCTCGTCCTCGTCAGAATGTaGGGCCATCCCTCCCTAGAGCACAAAGATCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SALCTTLVLVRM*GHPSLEHKDLQ Trigger: CTGCAGATCTTTGTGCTCTAGGGAGGGATGGCCGCACATTCTGACGAGGACGAGGGTGGTGCATAACGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | AAACGCCGCCGTTCCGTTTGTACCCTAGATGTGGGCTaGAGGGCTGCCTGGGCTCTGCTAACAAAAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: KRRRSVCTLDVG*RAAWALLTKAQ Trigger: TTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS GCA 72 bp | TGTGCGTGGTCTTCTCCTTCCTCTCCATGGTGGTGCTaGTCTTCACCGGCCTCATCTTCGTCAACCACTACG | + |
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Preference number: 6 (lower is better) Translates to: CAWSSPSSPWWC*SSPASSSSTTT Trigger: CGTAGTGGTTGACGAAGATGAGGCCGGTGAAGAGCAGCACCACCATGGAGAGGAAGGAGAAGACCACGCACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CAA 72 bp | CCTCTAAATGATACAAGGAAAACGCCGCCGTTCCGTTaGTACCCTAGATGTGGGCTGCAGGGCTGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PLNDTRKTPPFR*YPRCGLQGCLG Trigger: GCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCGTTTTCCTTGTATCATTTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 72 bp | GTCAACTGTATTGCAACTCTCTCCCAACTCGGCCACTaGGGAGCCTCGGTTTTCTGTCCCTCGGGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VNCIATLSQLGH*GASVFCPSGFC Trigger: ACAGAAGCCCGAGGGACAGAAAACCGAGGCTCCTCAGTGGCCGAGTTGGGAGAGAGTTGCAATACAGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590427.1 |
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| CDS GCA 72 bp | CATGTTGTCCAAGGGTCAACTGTATTGCACGCTGGCTaGGTGTGCGTGGTCTTCTCCTTCCTCTCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HVVQGSTVLHAG*VCVVFSFLSMV Trigger: CACCATGGAGAGGAAGGAGAAGACCACGCACACGCAGCCAGCGTGCAATACAGTTGACCCTTGGACAACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS CCA 72 bp | TCCGTTTGTACCCTAGATGTGGGCTGCAGGGCTGCCTaGGCTCTGCTAACAAAAGCACAAAGCGTGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: SVCTLDVGCRAA*ALLTKAQSVNG Trigger: GCCATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS CCA 72 bp | CTGCAGAGAAACCTAGATGTGGGCTGCAGGGCTGCCTaGGCTCTGCTAACAAAAGCACAAAGCGTGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: LQRNLDVGCRAA*ALLTKAQSVNG Trigger: GCCATTCACGCTTTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGTTTCTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424010.1 |
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| CDS GCA 72 bp | GACTTGAGAGTTTCTTTAAAGGTGCAGCTGCGCGCGTaGACACGTGCATCTGTGGCGGCTGTGAATGGACTT | + |
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Preference number: 6 (lower is better) Translates to: DLRVSLKVQLRA*TRASVAAVNGL Trigger: AAGTCCATTCACAGCCGCCACAGATGCACGTGTGCACGCGCGCAGCTGCACCTTTAAAGAAACTCTCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS GCA 72 bp | TTTTGCCTGGACTGTGCAAAATTGACCTCCGCGTTATaGACCACCCTCGTCCTCGTCAGAATGTGCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: FCLDCAKLTSAL*TTLVLVRMCGH Trigger: ATGGCCGCACATTCTGACGAGGACGAGGGTGGTGCATAACGCGGAGGTCAATTTTGCACAGTCCAGGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS CCA 72 bp | CCTGTGCACCAACGAAATAGCCACCTAGATCCGCTGTaGTCAGCGTCAGGAAAACAGCAAGACCCAGCTATG | + |
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Preference number: 6 (lower is better) Translates to: PVHQRNSHLDPL*SASGKQQDPAM Trigger: CATAGCTGGGTCTTGCTGTTTTCCTGACGCTGACCACAGCGGATCTAGGTGGCTATTTCGTTGGTGCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS CAA 72 bp | GCCTGCTACCATGTGAGACGTGACTTTGCTCCTCCTTaGCTTTCCATCATGATTGTGGGGCTTCCGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ACYHVRRDFAPP*LSIMIVGLPQP Trigger: TGGCTGCGGAAGCCCCACAATCATGATGGAAAGCAAAGGAGGAGCAAAGTCACGTCTCACATGGTAGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589724.1 ENST00000590427.1 |
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| CDS GCA 72 bp | TCTTGCTGTCTTCTGCAGAGAAACCTAGATGTGGGCTaGAGGGCTGCCTGGGCTCTGCTAACAAAAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: SCCLLQRNLDVG*RAAWALLTKAQ Trigger: TTGTGCTTTTGTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGTTTCTCTGCAGAAGACAGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424010.1 |
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| CDS CAA 90 bp | CTTCCCATCCAGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTaGCTGTCTTCTGCAGAGAAACGCTGGCTGCGTGTGCGTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPIQSSFFTNIPWGI*LSSAEKRWLRVRGL Trigger: AAGACCACGCACACGCAGCCAGCGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACTGGATGGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555502.5 |
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| CDS CAA 90 bp | CAAAAATTTCCTCTAAATGATACAAGGAAAACGCCGCCGTTCCGTTaGTACCCTAGATGTGGGCTGCAGGGCTGCCTGGGCTCTGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: QKFPLNDTRKTPPFR*YPRCGLQGCLGSAN Trigger: GTTAGCAGAGCCCAGGCAGCCCTGCAGCCCACATCTAGGGTACAAACGGAACGGCGGCGTTTTCCTTGTATCATTTAGAGGAAATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 72 bp | GTGCACACGTGCATCTGTGGCGGCTGTGAATGGACTTaGATTGCCCGGAGGAAGAATGAATGGGATGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: VHTCICGGCEWT*IARRKNEWDVN Trigger: GTTTACATCCCATTCATTCTTCCTCCGGGCAATTCAAGTCCATTCACAGCCGCCACAGATGCACGTGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555502.5 ENST00000587192.1 |
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| CDS TCA 72 bp | AGTTCCCCCACACATGCTCTCTTGCCTGCTACCATGTaGGACGTGACTTTGCTCCTCCTTTGCTTTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SSPTHALLPATM*DVTLLLLCFPS Trigger: TGATGGAAAGCAAAGGAGGAGCAAAGTCACGTCTCACATGGTAGCAGGCAAGAGAGCATGTGTGGGGGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS GCA 72 bp | AGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTTaGTGTCTTCTGCAGAGAAACGCTGGCTGCGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SHPFSQTFPGAS*CLLQRNAGCVC Trigger: GCACACGCAGCCAGCGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555502.5 |
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| CDS CAA 90 bp | CTTCCCATCCAGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTaGCTGTCTTCTGCAGAGAAACTAGATCCGCTGTGGTCAGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LPIQSSFFTNIPWGI*LSSAEKLDPLWSAS Trigger: TGACGCTGACCACAGCGGATCTAGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACTGGATGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446532.1 |
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| CDS CAA 90 bp | AGAATCTGTGTATTAGTTAGTAGACCTGCACGGTTCCAATCCATGTaGTCCAAGGGTCAACTGTATTGCACGCTGGCTGCGTGTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RICVLVSRPARFQSM*SKGQLYCTLAACAW Trigger: CCACGCACACGCAGCCAGCGTGCAATACAGTTGACCCTTGGACAACATGGATTGGAACCGTGCAGGTCTACTAACTAATACACAGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS GCA 72 bp | TATAAAGGGAAGTTCCCCCACACATGCTCTCTTGCCTaGTACCATGTGAGACGTGACTTTGCTCCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: YKGKFPHTCSLA*YHVRRDFAPPL Trigger: CAAAGGAGGAGCAAAGTCACGTCTCACATGGTAGCAGGCAAGAGAGCATGTGTGGGGGAACTTCCCTTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS CAA 72 bp | GTATTAGTTAGTAGACCTGCACGGTTCCAATCCATGTaGTCCAAGGGTCAACTGTATTGCACGCTGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VLVSRPARFQSM*SKGQLYCTLAA Trigger: CGCAGCCAGCGTGCAATACAGTTGACCCTTGGACAACATGGATTGGAACCGTGCAGGTCTACTAACTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS TCA 72 bp | CATGTGTACGTTAAAAGTTTAAGTGGACGAAGCCAGTaGGGGAGCCCAGGAACTCGGTTTAAGCCGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: HVYVKSLSGRSQ*GSPGTRFKPHF Trigger: AAAGTGCGGCTTAAACCGAGTTCCTGGGCTCCCTCACTGGCTTCGTCCACTTAAACTTTTAACGTACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS GCA 72 bp | AGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTTaGTGTCTTCTGCAGAGAAACCTAGATGTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SHPFSQTFPGAS*CLLQRNLDVGC Trigger: GCAGCCCACATCTAGGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424010.1 |
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| CDS TCA 72 bp | TGTGGTCAGCGTCAGGAAAACAGCAAGACCCAGCTATaGATCTGTTGTCTTCGTCCTCCTTTAAATCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CGQRQENSKTQL*ICCLRPPLNLS Trigger: GCTGAGATTTAAAGGAGGACGAAGACAACAGATTCATAGCTGGGTCTTGCTGTTTTCCTGACGCTGACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429475.5 ENST00000446532.1 |
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| CDS CAA 90 bp | CTTCCCATCCAGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTaGCTGTCTTCTGCAGAGAAACCAGTGCTTCTTAAGCCTTATTTC | + |
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Preference number: 6 (lower is better) Translates to: LPIQSSFFTNIPWGI*LSSAEKPVLLKPYF Trigger: GAAATAAGGCTTAAGAAGCACTGGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACTGGATGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS CAA 90 bp | GCTCATAGGGTGAGGCCCAACCCAGTGCTTCTTAAGCCTTATTTCTaGCTACCCGGTCCAGTTGATCTTCTGTTTTCATTAAATCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: AHRVRPNPVLLKPYF*LPGPVDLLFSLNQE Trigger: CTCTTGATTTAATGAAAACAGAAGATCAACTGGACCGGGTAGCAAGAAATAAGGCTTAAGAAGCACTGGGTTGGGCCTCACCCTATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439237.1 |
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| CDS GCA 72 bp | AGTCATCCTTTTTCACAAACATTCCCTGGGGCATCTTaGTGTCTTCTGCAGAGAAACCAGTGCTTCTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHPFSQTFPGAS*CLLQRNQCFLS Trigger: GCTTAAGAAGCACTGGTTTCTCTGCAGAAGACAGCAAGATGCCCCAGGGAATGTTTGTGAAAAAGGATGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS GCA 72 bp | ATCTGTTGGTTTTATAAAGGGAAGTTCCCCCACACATaGTCTCTTGCCTGCTACCATGTGAGACGTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: ICWFYKGKFPHT*SLACYHVRRDF Trigger: AAAGTCACGTCTCACATGGTAGCAGGCAAGAGAGCATGTGTGGGGGAACTTCCCTTTATAAAACCAACAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589724.1 |
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| CDS CAA 90 bp | CTGTGGTCAGCGTCAGGAAAACAGCAAGACCCAGCTATGAATCTGTaGTCTTCGTCCTCCTTTAAATCTCAGCAATATTTCAGAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LWSASGKQQDPAMNL*SSSSFKSQQYFRER Trigger: TCTCTCTCTGAAATATTGCTGAGATTTAAAGGAGGACGAAGACAACAGATTCATAGCTGGGTCTTGCTGTTTTCCTGACGCTGACCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429475.5 ENST00000446532.1 |
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| CDS CCA 72 bp | TTCATTAAATCAAGAGGACCTGTCCCATGTTACCCCTaGAGTTTCAGCTCTCTACATGTGTACGTTAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: FIKSRGPVPCYP*SFSSLHVYVKS Trigger: ACTTTTAACGTACACATGTAGAGAGCTGAAACTCCAGGGGTAACATGGGACAGGTCCTCTTGATTTAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429475.5 ENST00000439237.1 |
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| CDS CAA 72 bp | TCTGCAGAGAAACCAGTGCTTCTTAAGCCTTATTTCTaGCTACCCGGTCCAGTTGATCTTCTGTTTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: SAEKPVLLKPYF*LPGPVDLLFSL Trigger: TAATGAAAACAGAAGATCAACTGGACCGGGTAGCAAGAAATAAGGCTTAAGAAGCACTGGTTTCTCTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS CAA 90 bp | TTGCTGTCTTCTGCAGAGAAACCAGTGCTTCTTAAGCCTTATTTCTaGCTACCCGGTCCAGTTGATCTTCTGTTTTCATTAAATCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLSSAEKPVLLKPYF*LPGPVDLLFSLNQE Trigger: CTCTTGATTTAATGAAAACAGAAGATCAACTGGACCGGGTAGCAAGAAATAAGGCTTAAGAAGCACTGGTTTCTCTGCAGAAGACAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429475.5 |
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| CDS TCA 72 bp | AATTACCCAGTCTCGGGTATGTCTTTATTAGCGGTGTaGGAACAGACTAATAGCATGGATCATCATAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: NYPVSGMSLLAV*EQTNSMDHHKV Trigger: AACTTTATGATGATCCATGCTATTAGTCTGTTCTCACACCGCTAATAAAGACATACCCGAGACTGGGTAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589724.1 ENST00000590427.1 |
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| CDS CAA 72 bp | CTGATTTCTCTCTTTCTTTCCTTCTTTTTCTTCAGCTaGCTTCCCATCCAGTCATCCTTTTTCACAAACATT | + |
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Preference number: 6 (lower is better) Translates to: LISLFLSFFFFS*LPIQSSFFTNI Trigger: AATGTTTGTGAAAAAGGATGACTGGATGGGAAGCAAGCTGAAGAAAAAGAAGGAAAGAAAGAGAGAAATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000424010.1 ENST00000429475.5 ENST00000446532.1 ENST00000555502.5 |
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| CDS CAA 72 bp | ATAGAAACAATATTTATAAGTCCTCTTCTCCACCTCTaGTGTGGTGATTTACTGATTTCTCTCTTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IETIFISPLLHL*CGDLLISLFLS Trigger: GGAAAGAAAGAGAGAAATCAGTAAATCACCACACAAGAGGTGGAGAAGAGGACTTATAAATATTGTTTCTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000424010.1 ENST00000429475.5 ENST00000446532.1 ENST00000555502.5 |
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