Pregenerated sensors for CT45A5 (Homo sapiens)
Ensembl gene IDs: ENSG00000228836Ensembl transcript IDs: ENST00000487941.6
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTATCAGGGCAAAGGGAATaGGAAACGGGTAGCGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: KSQQPHPGRISNGSDSSVSGQRE*ETGSER Trigger: TCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGA...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| 3UTR-3UTR GCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTATACATCAGTGTGAGCTaGTGCAGAAACCACGACTGT | + |
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Preference number: 2 (lower is better) Translates to: KSQQPHPGRISNGSDSSVYISVS*CRNHDC Trigger: ACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTA...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| 3UTR-3UTR GCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTACATGACCAACTGACATaGTATCTCAGGGCAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KSQQPHPGRISNGSDSSVHDQLT*YLRAKG Trigger: TCCCTTTGCCCTGAGATAGCATGTCAGTTGGTCATG...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR TCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTACTCACAAAATGGCAGTaGAGTTGTGGCGCCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KSQQPHPGRISNGSDSSVLTKWQ*SCGASP Trigger: TGGGGAGGCGCCACAACTTCACTGCCATTTTGTGAG...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR TCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTACCAGCTACATCAGTGTaGGCTGCTGCAGAAACCACG | + |
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Preference number: 4 (lower is better) Translates to: KSQQPHPGRISNGSDSSVPATSV*AAAETT Trigger: CGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGG...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR TCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTATCCGTAATGAAGGTTTaGGTCATCCTGCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQQPHPGRISNGSDSSVSVMKV*VILPGQ Trigger: TTGGCCTGGCAGGATGACTCAAACCTTCATTACGGA...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR TCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTATCATTGTTTCAGTCCTaGAGTCCTGACCTTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSQQPHPGRISNGSDSSVSLFQS*SPDLAG Trigger: TCCAGCAAGGTCAGGACTTCAGGACTGAAACAATGA...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR GCA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTATCGTCTCATACATCTTaGTGCTTCCTTGATGATGGA | + |
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Preference number: 4 (lower is better) Translates to: KSQQPHPGRISNGSDSSVSSHTS*CFLDDG Trigger: TCCATCATCAAGGAAGCAGCAAGATGTATGAGACGA...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS-3UTR CAA 90 bp | AAATCACAGCAACCCCATCCAGGCAGGATATCTAATGGTTCAGACTCTTCCGTACCTGAAGTCCTGACCTaGCTGGAGGAGAGACGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KSQQPHPGRISNGSDSSVPEVLT*LEERRR Trigger: CCGCCGTCTCTCCTCCAGCAAGGTCAGGACTTCAGG...TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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| CDS TCA 72 bp | TCTGTTTTATCGGTCATTGTTTCAGTCCTGAAGTCCTaGCCTTGCTGGAGGAGAGACGGCGGCACCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SVLSVIVSVLKS*PCWRRDGGTSQ Trigger: TTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGTCAGGACTTCAGGACTGAAACAATGACCGATAAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487941.6 |
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