RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSRNP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178662

Ensembl transcript IDs: ENST00000314499.11, ENST00000342316.8, ENST00000409420.1, ENST00000409664.5, ENST00000421875.5, ENST00000464503.1, ENST00000651982.1

Found 734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGACTGTAAAAATGTAATTGATATGAATGTTGGTCAGCAGATGTaGGCACCAACTGGGCTGAAAGGGTGTCCACATTGTAACTGCCCC +
Preference number: 1 (lower is better)
Translates to: TDCKNVIDMNVGQQM*APTGLKGCPHCNCP
Trigger: GGGGCAGTTACAATGTGGACACCCTTTCAGCCCAGTTGGTGCTCACATCTGCTGACCAACATTCATATCAATTACATTTTTACAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 90 bp ATCCATGTGGGCATGCTCTGTGGAACTAGCTATGCATCTTCAGCTTaGATGAACATGCGGCTGTTCATTTTCATCAAAACATGTCTTCTA +
Preference number: 1 (lower is better)
Translates to: IHVGMLCGTSYASSA*MNMRLFIFIKTCLL
Trigger: TAGAAGACATGTTTTGATGAAAATGAACAGCCGCATGTTCATTCAAGCTGAAGATGCATAGCTAGTTCCACAGAGCATGCCCACATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 90 bp CACTGTTGTCTTAAAAGTTTCCTGAAATGTTTCCTGGGTTATGCATaGGTCAAATCCTCCTTGAAACTGTCTGATAGGAGTTTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: HCCLKSFLKCFLGYA*VKSSLKLSDRSLLV
Trigger: CACCAGCAAACTCCTATCAGACAGTTTCAAGGAGGATTTGACTCATGCATAACCCAGGAAACATTTCAGGAAACTTTTAAGACAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 90 bp ATATTCTCAAAAGACTTCCCTTGTGTAAGGACCATTCCCAATATCTaGATGGTTCAACACAGACTGAAGGATAACACCCAAGTCCTTTGG +
Preference number: 1 (lower is better)
Translates to: IFSKDFPCVRTIPNI*MVQHRLKDNTQVLW
Trigger: CCAAAGGACTTGGGTGTTATCCTTCAGTCTGTGTTGAACCATTCAGATATTGGGAATGGTCCTTACACAAGGGAAGTCTTTTGAGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 90 bp AGGTTAGTCAGGTATATGAAAAGTTGGAATAGAAGCTGTCATGATTaGAAGGGTAATTCTTCTCACAGGGCAGTGACTTTCTACCCTAGA +
Preference number: 1 (lower is better)
Translates to: RLVRYMKSWNRSCHD*KGNSSHRAVTFYPR
Trigger: TCTAGGGTAGAAAGTCACTGCCCTGTGAGAAGAATTACCCTTCCAATCATGACAGCTTCTATTCCAACTTTTCATATACCTGACTAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 90 bp CTAAAAAGTTGTGTGTCAAAGACTACAGTTTGGCTAGATATACTATaGAGGCAATACAACAGCTGCAGGTCAGGTTATTGTGTCTTGGCA +
Preference number: 1 (lower is better)
Translates to: LKSCVSKTTVWLDIL*RQYNSCRSGYCVLA
Trigger: TGCCAAGACACAATAACCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTCTTTGACACACAACTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 90 bp GGAAGCCATTGTTTAAATAACACAAGGACAAAGGCTGGGATCAAATaGTGGCTGTGTAAATCTCTGGAGTCATTTTATTCCATCAGACTC +
Preference number: 1 (lower is better)
Translates to: GSHCLNNTRTKAGIK*WLCKSLESFYSIRL
Trigger: GAGTCTGATGGAATAAAATGACTCCAGAGATTTACACAGCCACCATTTGATCCCAGCCTTTGTCCTTGTGTTATTTAAACAATGGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR GCA 90 bp CCCAAAGGGCCAATCATTCAAAAGGAACAACCCTGCTCTCATTACTaGAACCTACATAAAGACAAACCCAAAGCTCTTTTAATGTTAATA +
Preference number: 1 (lower is better)
Translates to: PKGPIIQKEQPCSHY*NLHKDKPKALLMLI
Trigger: TATTAACATTAAAAGAGCTTTGGGTTTGTCTTTATGTAGGTTGCAGTAATGAGAGCAGGGTTGTTCCTTTTGAATGATTGGCCCTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 90 bp TGGTTTGTGGGATATGTTTACAGGTTAGTCAGGTATATGAAAAGTTaGAATAGAAGCTGTCATGATTGGAAGGGTAATTCTTCTCACAGG +
Preference number: 1 (lower is better)
Translates to: WFVGYVYRLVRYMKS*NRSCHDWKGNSSHR
Trigger: CCTGTGAGAAGAATTACCCTTCCAATCATGACAGCTTCTATTCCAACTTTTCATATACCTGACTAACCTGTAAACATATCCCACAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 90 bp TTCCATCAGACTCTTCACAACTATTCCTATCTCCCACAGGAGGAGTaGAAAAACTTTGGATTCTTATTTGTCATTTTAAGCCAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: FHQTLHNYSYLPQEE*KNFGFLFVILSQGK
Trigger: CTTTCCTTGGCTTAAAATGACAAATAAGAATCCAAAGTTTTTCCACTCCTCCTGTGGGAGATAGGAATAGTTGTGAAGAGTCTGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 90 bp ACTGACTATTGGCCATTGCCTGAAATCTGTCATTCTCTAAGTGTGTaGTATGTATATATTTTGTATGTGTGTGCATGTGTATGTGTTAGG +
Preference number: 1 (lower is better)
Translates to: TDYWPLPEICHSLSV*YVYILYVCACVCVR
Trigger: CCTAACACATACACATGCACACACATACAAAATATATACATATCACACACTTAGAGAATGACAGATTTCAGGCAATGGCCAATAGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 90 bp AGAAGAATCTCAAACTTTCCAGTATTCACACACAGTTGGCCATTGTaGGTATCTTTGAAAAGATTAAACTATTCTGAGATCCCCATTTGG +
Preference number: 1 (lower is better)
Translates to: RRISNFPVFTHSWPL*VSLKRLNYSEIPIW
Trigger: CCAAATGGGGATCTCAGAATAGTTTAATCTTTTCAAAGATACTCACAATGGCCAACTGTGTGTGAATACTGGAAAGTTTGAGATTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGCTGAGGGAGGGCAGTaGACTAGACTCTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRAEGGQ*TRLSPE
Trigger: CTCTGGGGAGAGTCTAGTTCACTGCCCTCCCTCAGC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTCTACCCTTCAGCTTTaGTCAGGCTGGAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRSTLQL*SGWSWL
Trigger: GAGCCAGCTCCAGCCTGAGCAAAGCTGAAGGGTAGA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACGCTGGAGAAAAGGCTaGTTGCTGAGGTCGTGTCTC +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIRWRKG*LLRSCL
Trigger: GAGACACGACCTCAGCAACCAGCCTTTTCTCCAGCG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTCCTCTGCATTTACTaGGTTAGGTCCTCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLLCIY*VRSSEW
Trigger: CCACTCTGAGGACCTAACTCAGTAAATGCAGAGGAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGCCAGGGCTGGAGCATaGAGCTTTGCAATTGATAGT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIARAGA*SFAIDS
Trigger: ACTATCAATTGCAAAGCTTCATGCTCCAGCCCTGGC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAGGTTTCACACAGTTTaGCAGGTAGGCAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRFHTV*QVGNCE
Trigger: CTCACAGTTGCCTACCTGTCAAACTGTGTGAAACCT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCAATCCATGTGGGCATaGTCTGTGGAACTAGCTATG +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRQSMWA*SVELAM
Trigger: CATAGCTAGTTCCACAGAGCATGCCCACATGGATTG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACAGATGCAATCCATGTaGGCATGCTCTGTGGAACTA +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIQMQSM*ACSVEL
Trigger: TAGTTCCACAGAGCATGCCCACATGGATTGCATCTG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTATGCATCTTCAGCTTaGATGAACATGCGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRYASSA*MNMRLF
Trigger: GAACAGCCGCATGTTCATTCAAGCTGAAGATGCATA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTCCTCTGCATTTACTaGGTTAGGTCCTCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLLCIY*VRSSEW
Trigger: CCACTCTGAGGACCTAACTCAGTAAATGCAGAGGAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIFVEMD*SRWRKG
Trigger: GCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRFVEMD*SRWRKG
Trigger: GCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLLTGQ*LSTLDK
Trigger: TTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAGAGACTGTATTTGTaGAATGCCACAGTCATGTGG +
Preference number: 2 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQRLYL*NATVMW
Trigger: CCACATGACTGTGGCATTGCACAAATACAGTCTCTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAACCAACTGCACAGTaGAAGAGCTGCCAAGTAAAC +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKPTAQ*KSCQVN
Trigger: GTTTACTTGGCAGCTCTTCCACTGTGCAGTTGGTTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACATCTTCAGCTTGAATaGACATGCGGCTGTTCATTT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIHLQLE*TCGCSF
Trigger: AAATGAACAGCCGCATGTTCATTCAAGCTGAAGATG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAGGTCCTCAGAGTGGTaGAGGAAAATAGGTCATTTT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIRSSEW*RKIGHF
Trigger: AAAATGACCTATTTTCCTTCACCACTCTGAGGACCT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAACAAATCCTCATTCTaGTTAGCCCAAAGGGCCAAT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRINKSSF*LAQRAN
Trigger: ATTGGCCCTTTGGGCTAATCAGAATGAGGATTTGTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGGGCAGCTCTTTGTTaGATAGAACGGCTATTAATG +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIWAALC*IERLLM
Trigger: CATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTGGGCAGCTCTTTGTTaGATAGAACGGCTATTAATG +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRWAALC*IERLLM
Trigger: CATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAAGGAAATTGGGAATaGCAAAGGAGATGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKGNWE*QRRCKL
Trigger: CAGCTTGCATCTCCTTTGTCATTCCCAATTTCCTTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGAGTCAAATCCTCCTTaGAACTGTCTGATAGGAGTT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIESNPP*NCLIGV
Trigger: AACTCCTATCAGACAGTTTCAAGGAGGATTTGACTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACCACACGAGGTACCGTaGAGGGGCACTAAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTPHEVP*RGTKVH
Trigger: ATGCACTTTAGTGCCCCTTCACGGTACCTCGTGTGG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAA +
Preference number: 2 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLLTGQ*LSTLDK
Trigger: TTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGAATTCAGGGAGTATTaGAGGGCCATATATGATTGT +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIEFREY*RAIYDC
Trigger: ACAATCATATATGGCCCTGCAATACTCCCTGAATTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACGCTGGAGAAAAGGCTaGTTGCTGAGGTCGTGTCTC +
Preference number: 2 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTRWRKG*LLRSCL
Trigger: GAGACACGACCTCAGCAACCAGCCTTTTCTCCAGCG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTCTCTTTTCAGAAACTaGACTGTCATTCTACCCTTC +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRSLFRN*TVILPF
Trigger: GAAGGGTAGAATGACAGTCCAGTTTCTGAAAAGAGA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGAAAAGGCTGGTTGCTaGGGTCGTGTCTCTTCCATG +
Preference number: 2 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTEKAGC*GRVSSM
Trigger: CATGGAAGAGACACGACCTCAGCAACCAGCCTTTTC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDTVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAGAGACTGTATTTGTaGAATGCCACAGTCATGTGG +
Preference number: 2 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQRLYL*NATVMW
Trigger: CCACATGACTGTGGCATTGCACAAATACAGTCTCTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 2 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTGATCTACACAGATTaGCAGGTTTCACACAGTTTG +
Preference number: 2 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLIYTD*QVSHSL
Trigger: CAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATCAAAGACTACAGTTTaGCTAGATATACTATGGAGG +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISKTTV*LDILWR
Trigger: CCTCCATAGTATATCTAGCCAAACTGTAGTCTTTGA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACAAGCCTTTAAACTTTaGGTTTTGGTTGTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIQAFKL*VLVVVR
Trigger: TCTTACCACAACCAAAACCCAAAGTTTAAAGGCTTG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSTVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTCTAAAGGTGGGGAGTaGATGTTTTATTTCTATCTG +
Preference number: 2 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSKGGE*MFYFYL
Trigger: CAGATAGAAATAAAACATGCACTCCCCACCTTTAGA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 2 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 2 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATATGCATCTTCAGCTTaGATGAACATGCGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTYASSA*MNMRLF
Trigger: GAACAGCCGCATGTTCATTCAAGCTGAAGATGCATA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 2 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTACAGAGACTGTATTaGTGCAATGCCACAGTCATG +
Preference number: 3 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLQRLY*CNATVM
Trigger: CATGACTGTGGCATTGCACAAATACAGTCTCTGTAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
3UTR-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCATGTGGGCAGCTCTTaGTTGAATAGAACGGCTATT +
Preference number: 3 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRHVGSS*LNRTAI
Trigger: AATAGCCGTTCTATTCAACAAAGAGCTGCCCACATG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTTTTGTAGAGATGGATaGATCACGCTGGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRFCRDG*ITLEKR
Trigger: CCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAACTGACTATTGGCCATaGCCTGAAATCTGTCATTCT +
Preference number: 3 (lower is better)
Translates to: RIHSPGSHHSTGITTLRITDYWP*PEICHS
Trigger: AGAATGACAGATTTCAGGCAATGGCCAATAGTCAGT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATTTCCACCTGCTAATTaGATGGTTTGTAACTCCAGC +
Preference number: 3 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIFPPAN*MVCNSS
Trigger: GCTGGAGTTACAAACCATCAAATTAGCAGGTGGAAA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR GCA 72 bp AATGTGAATGGATTCCAGATGCAATCCATGTGGGCATaGTCTGTGGAACTAGCTATGCATCTTCAGCTTGAA +
Preference number: 3 (lower is better)
Translates to: NVNGFQMQSMWA*SVELAMHLQLE
Trigger: TTCAAGCTGAAGATGCATAGCTAGTTCCACAGAGCATGCCCACATGGATTGCATCTGGAATCCATTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTACAGAGACTGTATTaGTGCAATGCCACAGTCATG +
Preference number: 3 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLQRLY*CNATVM
Trigger: CATGACTGTGGCATTGCACAAATACAGTCTCTGTAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGCTGCTTCAGCCACTaGACTTTCAAATCAATTCGG +
Preference number: 3 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSCFSH*TFKSIR
Trigger: CCGAATTGATTTGAAAGTCAAGTGGCTGAAGCAGCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp GGCATGCTCTGTGGAACTAGCTATGCATCTTCAGCTTaGATGAACATGCGGCTGTTCATTTTCATCAAAACA +
Preference number: 3 (lower is better)
Translates to: GMLCGTSYASSA*MNMRLFIFIKT
Trigger: TGTTTTGATGAAAATGAACAGCCGCATGTTCATTCAAGCTGAAGATGCATAGCTAGTTCCACAGAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp GAAATCTCATTATACACTGATTTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGCTGGTTGCTGAGGTCG +
Preference number: 3 (lower is better)
Translates to: EISLYTDFVEMD*SRWRKGWLLRS
Trigger: CGACCTCAGCAACCAGCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAATCAGTGTATAATGAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 72 bp CATAAAAATGTGAATGGATTCCAGATGCAATCCATGTaGGCATGCTCTGTGGAACTAGCTATGCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: HKNVNGFQMQSM*ACSVELAMHLQ
Trigger: CTGAAGATGCATAGCTAGTTCCACAGAGCATGCCCACATGGATTGCATCTGGAATCCATTCACATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATGGAGAAAAGGCTGGTaGCTGAGGTCGTGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTWRKGW*LRSCLF
Trigger: GAAGAGACACGACCTCAGCAACCAGCCTTTTCTCCA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTTGTCATTTTCTCTTaGGGCCTGTGCTCTTTAGAT +
Preference number: 3 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLVIFS*GLCSLD
Trigger: ATCTAAAGAGCACAGGCCCAAAGAGAAAATGACAAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTCTCCCAAAGGAAATaGGGAATGACAAAGGAGATG +
Preference number: 3 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFSQRK*GMTKEM
Trigger: CATCTCCTTTGTCATTCCCAATTTCCTTTGGGAGAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp GTCATGATTGGAAGGGTAATTCTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAATGGATAGGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VMIGRVILLTGQ*LSTLDKWIGEK
Trigger: TTTTTCCCCTATCCATTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAGAATTACCCTTCCAATCATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp AAAAATGTAATTGATATGAATGTTGGTCAGCAGATGTaGGCACCAACTGGGCTGAAAGGGTGTCCACATTGT +
Preference number: 3 (lower is better)
Translates to: KNVIDMNVGQQM*APTGLKGCPHC
Trigger: ACAATGTGGACACCCTTTCAGCCCAGTTGGTGCTCACATCTGCTGACCAACATTCATATCAATTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp AAAGACTTCCCTTGTGTAAGGACCATTCCCAATATCTaGATGGTTCAACACAGACTGAAGGATAACACCCAA +
Preference number: 3 (lower is better)
Translates to: KDFPCVRTIPNI*MVQHRLKDNTQ
Trigger: TTGGGTGTTATCCTTCAGTCTGTGTTGAACCATTCAGATATTGGGAATGGTCCTTACACAAGGGAAGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGTCAAAGACTACAGTTaGGCTAGATATACTATGGAG +
Preference number: 3 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFVKDYS*ARYTME
Trigger: CTCCATAGTATATCTAGCCAAACTGTAGTCTTTGAC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 72 bp AGGTATATGAAAAGTTGGAATAGAAGCTGTCATGATTaGAAGGGTAATTCTTCTCACAGGGCAGTGACTTTC +
Preference number: 3 (lower is better)
Translates to: RYMKSWNRSCHD*KGNSSHRAVTF
Trigger: GAAAGTCACTGCCCTGTGAGAAGAATTACCCTTCCAATCATGACAGCTTCTATTCCAACTTTTCATATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp AATGTTTCCTGGGTTATGCATGAGTCAAATCCTCCTTaGAACTGTCTGATAGGAGTTTGCTGGTGTAAATTT +
Preference number: 3 (lower is better)
Translates to: NVSWVMHESNPP*NCLIGVCWCKF
Trigger: AAATTTACACCAGCAAACTCCTATCAGACAGTTTCAAGGAGGATTTGACTCATGCATAACCCAGGAAACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp CTTAAAAGTTTCCTGAAATGTTTCCTGGGTTATGCATaGGTCAAATCCTCCTTGAAACTGTCTGATAGGAGT +
Preference number: 3 (lower is better)
Translates to: LKSFLKCFLGYA*VKSSLKLSDRS
Trigger: ACTCCTATCAGACAGTTTCAAGGAGGATTTGACTCATGCATAACCCAGGAAACATTTCAGGAAACTTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp TCCAGTGTGGCAGTAGGACTTGATGAAGGTCTCTGGTaGTACAAGTACCTAGATAAATTTAAAAGAGACATT +
Preference number: 3 (lower is better)
Translates to: SSVAVGLDEGLW*YKYLDKFKRDI
Trigger: AATGTCTCTTTTAAATTTATCTAGGTACTTGTATCACCAGAGACCTTCATCAAGTCCTACTGCCACACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR GCA 72 bp CCAATCATTCAAAAGGAACAACCCTGCTCTCATTACTaGAACCTACATAAAGACAAACCCAAAGCTCTTTTA +
Preference number: 3 (lower is better)
Translates to: PIIQKEQPCSHY*NLHKDKPKALL
Trigger: TAAAAGAGCTTTGGGTTTGTCTTTATGTAGGTTGCAGTAATGAGAGCAGGGTTGTTCCTTTTGAATGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR CCA 72 bp TGTTTAAATAACACAAGGACAAAGGCTGGGATCAAATaGTGGCTGTGTAAATCTCTGGAGTCATTTTATTCC +
Preference number: 3 (lower is better)
Translates to: CLNNTRTKAGIK*WLCKSLESFYS
Trigger: GGAATAAAATGACTCCAGAGATTTACACAGCCACCATTTGATCCCAGCCTTTGTCCTTGTGTTATTTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATTTTGTAGAGATGGATaGATCACGCTGGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTFCRDG*ITLEKR
Trigger: CCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp GTAAAAGAAAGTAGTCACCAACGTGACTTACATCTTTaGAATGACCTCATTTCCCATGGATACAACAAGTAT +
Preference number: 3 (lower is better)
Translates to: VKESSHQRDLHL*NDLISHGYNKY
Trigger: ATACTTGTTGTATCCATGGGAAATGAGGTCATTTCAAAGATGTAAGTCACGTTGGTGACTACTTTCTTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
3UTR TCA 72 bp TCAAACTTTCCAGTATTCACACACAGTTGGCCATTGTaGGTATCTTTGAAAAGATTAAACTATTCTGAGATC +
Preference number: 3 (lower is better)
Translates to: SNFPVFTHSWPL*VSLKRLNYSEI
Trigger: GATCTCAGAATAGTTTAATCTTTTCAAAGATACTCACAATGGCCAACTGTGTGTGAATACTGGAAAGTTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGCCACAGTCCTCTCGTaGGAGGCGGATGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRATVLS*EADGSE
Trigger: CTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTCAGCCGACTGCAGGTaGAGCACTGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSADCR*STAAWG
Trigger: GCCCCAGGCTGCAGTGCTGCACCTGCAGTCGGCTGA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGGCGCACGCTGTTATaGCGGCTGGACATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRWRTLL*RLDIPR
Trigger: CCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGGCGCACGCTGTTATaGCGGCTGGACATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIWRTLL*RLDIPR
Trigger: CCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGCCACAGTCCTCTCGTaGGAGGCGGATGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTATVLS*EADGSE
Trigger: CTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGCTGAGGGAGGGCAGTaGACTAGACTCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRAEGGQ*TRLSPE
Trigger: CTCTGGGGAGAGTCTAGTTCACTGCCCTCCCTCAGC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGGACATCCCCAGGGTaGTTCCCCCTTGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRWTSPG*FPLDWA
Trigger: TGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTGGACATCCCCAGGGTaGTTCCCCCTTGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRWTSPG*FPLDWA
Trigger: TGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCGGTGGAGCCTCTCCTaGTCCCTTGCAAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRWSLS*SLANSP
Trigger: TGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTGCAGGTGCAGCACTaGAGCCTGGGGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILQVQH*SLGLSF
Trigger: GAAACTGAGCCCCAGGCTGCAGTGCTGCACCTGCAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATCAGCCGACTGCAGGTaGAGCACTGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSADCR*STAAWG
Trigger: GCCCCAGGCTGCAGTGCTGCACCTGCAGTCGGCTGA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGGGTGCTTCCCCCTTaGCTGGGCACACTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRVLPP*LGTLVK
Trigger: CTTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAGCCAGGCTGCAGGTaGACGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQPGCR*TCLDHR
Trigger: TCTGTGATCCAGACACGTGCACCTGCAGCCTGGCTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCAGCCAGGCTGCAGGTaGACGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRQPGCR*TCLDHR
Trigger: TCTGTGATCCAGACACGTGCACCTGCAGCCTGGCTG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTGGCGCACGCTGTTATaGCGGCTGGACATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFWRTLL*RLDIPR
Trigger: CCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATCGCCAAGAGTGTACTaGCGCACGCTGTTATGGCGG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISPRVY*RTLLWR
Trigger: CCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGGCAGCCATTCAGCGTaGGGATTTGCTGCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIGSHSA*GFAALG
Trigger: ACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRGVGS*VVGGTI
Trigger: TATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCGATTACAGAGGGGTTaGCAGCTGGGTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRLQRG*QLGSGR
Trigger: CCTCCCACTACCCAGCTGCCAACCCCTCTGTAATCG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACAGCTTTGCTCAGGCTaGAGCTGGCTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIQLCSG*SWLFPT
Trigger: AGTGGGGAAGAGCCAGCTCCAGCCTGAGCAAAGCTG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCGGTGGAGCCTCTCCTaGTCCCTTGCAAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDRWSLS*SLANSP
Trigger: TGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCAACTTCGGCATGGGTaGCCAAACCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRQLRHG*PNLPRS
Trigger: GCTTCGTGGAAGGTTTGGGCACCCATGCCGAAGTTG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACGCTGTTATGGCGGCTaGACATCCCCAGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTRCYGG*TSPGCF
Trigger: GAAGCACCCTGGGGATGTCCAGCCGCCATAACAGCG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGCAGGTGCACGTGTCTaGATCACAGAACACTCGGCA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIAGARV*ITEHSA
Trigger: TGCCGAGTGTTCTGTGATCCAGACACGTGCACCTGC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGCAGGTGCACGTGTCTaGATCACAGAACACTCGGCA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRAGARV*ITEHSA
Trigger: TGCCGAGTGTTCTGTGATCCAGACACGTGCACCTGC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCGCTGGAGAAAAGGCTaGTTGCTGAGGTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRWRKG*LLRSCL
Trigger: GAGACACGACCTCAGCAACCAGCCTTTTCTCCAGCG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGGGTGCTTCCCCCTTaGCTGGGCACACTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRVLPP*LGTLVK
Trigger: CTTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGCCACAGTCCTCTCGTaGGAGGCGGATGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVATVLS*EADGSE
Trigger: CTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGCCACAGTCCTCTCGTaGGAGGCGGATGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLATVLS*EADGSE
Trigger: CTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGCTGAGGGAGGGCAGTaGACTAGACTCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSAEGGQ*TRLSPE
Trigger: CTCTGGGGAGAGTCTAGTTCACTGCCCTCCCTCAGC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGAAAAGGCTGGTTGCTaGGGTCGTGTCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIEKAGC*GRVSSM
Trigger: CATGGAAGAGACACGACCTCAGCAACCAGCCTTTTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAGGAAGCCATGTCCCTaGCAAGAAGGGTCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTRKPCP*QEGSGV
Trigger: TACCCCCGACCCTTCTTGTCAGGGACATGGCTTCCT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAGCCCTGTGACCTTTaGACTCCCTTCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQPCDL*TPFCPL
Trigger: GAGGGGGCAGAAGGGAGTTCAAAGGTCACAGGGCTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTGGACATCCCCAGGGTaGTTCCCCCTTGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSWTSPG*FPLDWA
Trigger: TGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAGCCAGGCTGCAGGTaGACGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQPGCR*TCLDHR
Trigger: TCTGTGATCCAGACACGTGCACCTGCAGCCTGGCTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACAGCCAGGCTGCAGGTaGACGTGTCTGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTQPGCR*TCLDHR
Trigger: TCTGTGATCCAGACACGTGCACCTGCAGCCTGGCTG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCAGCCGACTGCAGGTaGAGCACTGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSADCR*STAAWG
Trigger: GCCCCAGGCTGCAGTGCTGCACCTGCAGTCGGCTGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATCAGCCGACTGCAGGTaGAGCACTGCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLSADCR*STAAWG
Trigger: GCCCCAGGCTGCAGTGCTGCACCTGCAGTCGGCTGA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTCCGCTGCAAAAGCTaGTCCCATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILRCKS*SHPPLL
Trigger: AAGAAGAGGAGGATGGGAGCAGCTTTTGCAGCGGAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTCGCCAAGAGTGTACTaGCGCACGCTGTTATGGCGG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSPRVY*RTLLWR
Trigger: CCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCAACATCTCCCGGTaGAGCCTCTCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLNISR*SLSCSL
Trigger: AAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGACATACGATCCACCTaGCACTTAATGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIDIRST*HLMPAR
Trigger: CCTGGCTGGCATTAAGTGCCAGGTGGATCGTATGTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGCAGCACTGCAGCCTaGGGCTCAGTTTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRICSTAA*GSVSIS
Trigger: TGAGATTGAAACTGAGCCCCAGGCTGCAGTGCTGCA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTGCAGCACTGCAGCCTaGGGCTCAGTTTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRCSTAA*GSVSIS
Trigger: TGAGATTGAAACTGAGCCCCAGGCTGCAGTGCTGCA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGGACAACTTCGGCATaGGTGCCCAAACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTGTTSA*VPKPST
Trigger: CGTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDRGVGS*VVGGTI
Trigger: TATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTRGVGS*VVGGTI
Trigger: TATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACGATTACAGAGGGGTTaGCAGCTGGGTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTRLQRG*QLGSGR
Trigger: CCTCCCACTACCCAGCTGCCAACCCCTCTGTAATCG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCGATTACAGAGGGGTTaGCAGCTGGGTAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRLQRG*QLGSGR
Trigger: CCTCCCACTACCCAGCTGCCAACCCCTCTGTAATCG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTAGGGTGCTTCCCCCTTaGCTGGGCACACTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSRVLPP*LGTLVK
Trigger: CTTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGAATATTCTACGGAGTaGGCGACAGGGCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGREYSTE*ATGPIE
Trigger: TTCTATGGGCCCTGTCGCTCACTCCGTAGAATATTC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCCACACGAGGTACCGTaGAGGGGCACTAAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFPHEVP*RGTKVH
Trigger: ATGCACTTTAGTGCCCCTTCACGGTACCTCGTGTGG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTCCTCTGCATTTACTaGGTTAGGTCCTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLLCIY*VRSSEW
Trigger: CCACTCTGAGGACCTAACTCAGTAAATGCAGAGGAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCATTTTCCTGACCCCTaGGAAAGCAGGAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRHFPDP*ESRKPL
Trigger: CAATGGCTTCCTGCTTTCTCAGGGGTCAGGAAAATG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACAGTCCTCCAGCAGCTaGAACGGAATGCTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTQSSSS*NGMLGK
Trigger: CTTACCCAGCATTCCGTTTCAGCTGCTGGAGGACTG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTTCAGCGTGGGGATTTaGTGCTCTCGGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRFSVGI*CSRFFS
Trigger: GGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAATTCTTCAGCCGACTaGAGGTGCAGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTNSSAD*RCSTAA
Trigger: GGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAATTCTTCAGCCGACTaGAGGTGCAGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDNSSAD*RCSTAA
Trigger: GGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACAACTTCGGCATGGGTaGCCAAACCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTQLRHG*PNLPRS
Trigger: GCTTCGTGGAAGGTTTGGGCACCCATGCCGAAGTTG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAACTTCGGCATGGGTaGCCAAACCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQLRHG*PNLPRS
Trigger: GCTTCGTGGAAGGTTTGGGCACCCATGCCGAAGTTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRITIGLF*LSGIVN
Trigger: GTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAAC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRTIGLF*LSGIVN
Trigger: GTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAAC +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRTIGLF*LSGIVN
Trigger: GTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGGGCAGAAACCAACTaGACAGTGGAAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTGAETN*TVEELP
Trigger: TGGCAGCTCTTCCACTGTGCAGTTGGTTTCTGCCCC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTCTACCCTTCAGCTTTaGTCAGGCTGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSTLQL*SGWSWL
Trigger: GAGCCAGCTCCAGCCTGAGCAAAGCTGAAGGGTAGA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTGGCGCACGCTGTTATaGCGGCTGGACATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVWRTLL*RLDIPR
Trigger: CCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTCGTGAGAGGCGGATaGCTCGGAGTTCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLVRGG*LGVRAF
Trigger: AAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGCACTTATCTCACTGTaGCAGCCATTCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTALISL*QPFSVG
Trigger: CCCCACGCTGAATGGCTGCCACAGTGAGATAAGTGC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTCCGTCAGAACACACTaGAGAGAGTACACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSVRTH*REYTPP
Trigger: GGGAGGAGTGTACTCTCTTCAGTGTGTTCTGACGGA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314499.11
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTTGCATGGCTTTCGTaGACGGCGGTGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTFAWLS*TAVPSE
Trigger: TTCTGATGGCACCGCCGTTCACGAAAGCCATGCAAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGTCTCAACCACGGGTaGTTTGATGCACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRCLNHG*FDALFM
Trigger: CATGAAGAGTGCATCAAATCACCCGTGGTTGAGACA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGGTTTCACACAGTTTaGCAGGTAGGCAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRFHTV*QVGNCE
Trigger: CTCACAGTTGCCTACCTGTCAAACTGTGTGAAACCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAGGTTTCACACAGTTTaGCAGGTAGGCAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIRFHTV*QVGNCE
Trigger: CTCACAGTTGCCTACCTGTCAAACTGTGTGAAACCT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGCTGAGGGAGGGCAGTaGACTAGACTCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHAEGGQ*TRLSPE
Trigger: CTCTGGGGAGAGTCTAGTTCACTGCCCTCCCTCAGC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGAAAAGGCTGGTTGCTaGGGTCGTGTCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFEKAGC*GRVSSM
Trigger: CATGGAAGAGACACGACCTCAGCAACCAGCCTTTTC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGACAAGTCTTGCCTTTaGAAGCACAAAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIDKSCL*KHKGAS
Trigger: GGAAGCACCTTTGTGCTTTCAAAGGCAAGACTTGTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGACAAGTCTTGCCTTTaGAAGCACAAAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRDKSCL*KHKGAS
Trigger: GGAAGCACCTTTGTGCTTTCAAAGGCAAGACTTGTC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGTTGGTCAGCAGATGTaGGCACCAACTGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDVGQQM*APTGLK
Trigger: TTTCAGCCCAGTTGGTGCTCACATCTGCTGACCAAC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGTTGGTCAGCAGATGTaGGCACCAACTGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTVGQQM*APTGLK
Trigger: TTTCAGCCCAGTTGGTGCTCACATCTGCTGACCAAC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATGGACATCCCCAGGGTaGTTCCCCCTTGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLWTSPG*FPLDWA
Trigger: TGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAATGGCTCGGAGTTCGTaGTTTTCTTCCACGTCAATC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIMARSS*FSSTSI
Trigger: GATTGACGTGGAAGAAAAGCACGAACTCCGAGCCAT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTGCAGGTGCAGCACTaGAGCCTGGGGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLQVQH*SLGLSF
Trigger: GAAACTGAGCCCCAGGCTGCAGTGCTGCACCTGCAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTCCGCTGCAAAAGCTaGTCCCATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLRCKS*SHPPLL
Trigger: AAGAAGAGGAGGATGGGAGCAGCTTTTGCAGCGGAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTCCGCTGCAAAAGCTaGTCCCATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLRCKS*SHPPLL
Trigger: AAGAAGAGGAGGATGGGAGCAGCTTTTGCAGCGGAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAACTTCGGCATGGGTaGCCAAACCTTCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQLRHG*PNLPRS
Trigger: GCTTCGTGGAAGGTTTGGGCACCCATGCCGAAGTTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAATCCATGTGGGCATaGTCTGTGGAACTAGCTATG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQSMWA*SVELAM
Trigger: CATAGCTAGTTCCACAGAGCATGCCCACATGGATTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGACATCTGATGAGCTGTaGTGTTGGTGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRTSDEL*CWCRAT
Trigger: TGTAGCTCTGCACCAACAGCACAGCTCATCAGATGT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAGAGCTGAATTGTGTTaGCAAGGAAACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRAELC*QGNCLP
Trigger: GGGAAGGCAGTTTCCTTGGCAACACAATTCAGCTCT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTACCTACTGCTTGCTaGACGGCATCAGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLPTAC*TASASL
Trigger: CAGTGAGGCTGATGCCGTGCAGCAAGCAGTAGGTAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGCAGCTGAAACGGAATaGTGGGTAAGGAATTGTGGA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRAAETE*WVRNCG
Trigger: TCCACAATTCCTTACCCAGCATTCCGTTTCAGCTGC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACGCTGTTATGGCGGCTaGACATCCCCAGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLRCYGG*TSPGCF
Trigger: GAAGCACCCTGGGGATGTCCAGCCGCCATAACAGCG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGACATACGATCCACCTaGCACTTAATGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTDIRST*HLMPAR
Trigger: CCTGGCTGGCATTAAGTGCCAGGTGGATCGTATGTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGCACTTATCTCACTGTaGCAGCCATTCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSALISL*QPFSVG
Trigger: CCCCACGCTGAATGGCTGCCACAGTGAGATAAGTGC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATGCAGCACTGCAGCCTaGGGCTCAGTTTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTCSTAA*GSVSIS
Trigger: TGAGATTGAAACTGAGCCCCAGGCTGCAGTGCTGCA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTATTGCTCCGGGGTCATaGTGTAAGGCACCAGCGAAA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFIAPGS*CKAPAK
Trigger: TTTCGCTGGTGCCTTACACCATGACCCCGGAGCAAT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGATGAGCTGTGCTGTTaGTGCAGAGCTACAGCATTT +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRDELCC*CRATAF
Trigger: AAATGCTGTAGCTCTGCACCAACAGCACAGCTCATC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGATGTGAGCACCAACTaGGCTGAAAGGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFDVSTN*AERVST
Trigger: TGTGGACACCCTTTCAGCCCAGTTGGTGCTCACATC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGGAAGGGGGTCTCATaGTCCAGTTTGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRKGVS*SSLKKP
Trigger: TGGCTTTTTCAAACTGGACCATGAGACCCCCTTCCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAGGAAGGGGGTCTCATaGTCCAGTTTGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRKGVS*SSLKKP
Trigger: TGGCTTTTTCAAACTGGACCATGAGACCCCCTTCCT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAGGAAGGGGGTCTCATaGTCCAGTTTGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIRKGVS*SSLKKP
Trigger: TGGCTTTTTCAAACTGGACCATGAGACCCCCTTCCT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGTTCTGACTCTGAGTTaGGTGTCAACTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIVLTLS*VSTLSR
Trigger: TCTGCTCAGAGTTGACACCCAACTCAGAGTCAGAAC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAGAGCATCCGAGTTTaGGAGATATGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKSIRV*EICSCT
Trigger: GGTACAGCTGCATATCTCCCAAACTCGGATGCTCTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGAGGAAGGGGTAAAATaGCTAGAAGTGGATGGATTG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVREEGVK*LEVDGL
Trigger: CAATCCATCCACTTCTAGTCATTTTACCCCTTCCTC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAATTGTGTGCAAAAAGTaGGTCCGAACACGGATAGGA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIIVCKK*VRTRIG
Trigger: TCCTATCCGTGTTCGGACTCACTTTTTGCACACAAT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGATTGTGTGCAAAAAGTaGGTCCGAACACGGATAGGA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRIVCKK*VRTRIG
Trigger: TCCTATCCGTGTTCGGACTCACTTTTTGCACACAAT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAACCACGGGTGATTTaGTGCACTCTTCATGCAATA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQPRVI*CTLHAI
Trigger: TATTGCATGAAGAGTGCATCAAATCACCCGTGGTTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATATGCATCTTCAGCTTaGATGAACATGCGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIYASSA*MNMRLF
Trigger: GAACAGCCGCATGTTCATTCAAGCTGAAGATGCATA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCCTCTGCATTTACTaGGTTAGGTCCTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLLCIY*VRSSEW
Trigger: CCACTCTGAGGACCTAACTCAGTAAATGCAGAGGAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLLTGQ*LSTLDK
Trigger: TTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAGGAAGCCATGTCCCTaGCAAGAAGGGTCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVRKPCP*QEGSGV
Trigger: TACCCCCGACCCTTCTTGTCAGGGACATGGCTTCCT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGATCCCCATTTGGCATaGCTAGTGCCTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRDPHLA*LVPNES
Trigger: TGATTCATTAGGCACTAGTCATGCCAAATGGGGATC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCATTTTCCTGACCCCTaGGAAAGCAGGAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFHFPDP*ESRKPL
Trigger: CAATGGCTTCCTGCTTTCTCAGGGGTCAGGAAAATG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTTCCACCAGCCCTGTaGCCTTTGAACTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSFPPAL*PLNSLL
Trigger: CAGAAGGGAGTTCAAAGGTCACAGGGCTGGTGGAAA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACGGTGGAGCCTCTCCTaGTCCCTTGCAAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTRWSLS*SLANSP
Trigger: TGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGCGTGGGGATTTGCTaGTCTCGGTTTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDSVGIC*SRFFSS
Trigger: ACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGCGTGGGGATTTGCTaGTCTCGGTTTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSVGIC*SRFFSS
Trigger: ACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTCAGCGTGGGGATTTaGTGCTCTCGGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTFSVGI*CSRFFS
Trigger: GGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTCAGCGTGGGGATTTaGTGCTCTCGGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFSVGI*CSRFFS
Trigger: GGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTGCAGGTGCAGCACTaGAGCCTGGGGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLQVQH*SLGLSF
Trigger: GAAACTGAGCCCCAGGCTGCAGTGCTGCACCTGCAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGAGCTGTGCTGTTGGTaGAGAGCTACAGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFELCCW*RATAFW
Trigger: CCAAAATGCTGTAGCTCTGCACCAACAGCACAGCTC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAGCTGTGCTGTTGGTaGAGAGCTACAGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTELCCW*RATAFW
Trigger: CCAAAATGCTGTAGCTCTGCACCAACAGCACAGCTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCGAGCTGGTCTCATTTaGATAAGGCTCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSRAGLI*IRLRQS
Trigger: GGACTGCCTGAGCCTTATGCAAATGAGACCAGCTCG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCCCTCCTCTCGCTTCTaGAGTCAAAGCCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVPSSRF*SQSLRA
Trigger: AGCTCGGAGGCTTTGACTGCAGAAGCGAGAGGAGGG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGCTGTCACATGTACCTaGGTGCACTATATAACGACT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRAVTCT*VHYITT
Trigger: AGTCGTTATATAGTGCACGCAGGTACATGTGACAGC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAATGACTAGAAGTGGATaGATTGACACTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIMTRSG*IDTVPT
Trigger: AGTGGGGACAGTGTCAATCCATCCACTTCTAGTCAT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCGCCAAGAGTGTACTaGCGCACGCTGTTATGGCGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSPRVY*RTLLWR
Trigger: CCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATCGCCAAGAGTGTACTaGCGCACGCTGTTATGGCGG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLSPRVY*RTLLWR
Trigger: CCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTCAACATCTCCCGGTaGAGCCTCTCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLNISR*SLSCSL
Trigger: AAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTCAACATCTCCCGGTaGAGCCTCTCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLNISR*SLSCSL
Trigger: AAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGACATACGATCCACCTaGCACTTAATGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSDIRST*HLMPAR
Trigger: CCTGGCTGGCATTAAGTGCCAGGTGGATCGTATGTC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGGCAGCCATTCAGCGTaGGGATTTGCTGCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVGSHSA*GFAALG
Trigger: ACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGGCAGCCATTCAGCGTaGGGATTTGCTGCTCTCGGT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHGSHSA*GFAALG
Trigger: ACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGGGACAACTTCGGCATaGGTGCCCAAACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVGTTSA*VPKPST
Trigger: CGTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGGGACAACTTCGGCATaGGTGCCCAAACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLGTTSA*VPKPST
Trigger: CGTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGGGACAACTTCGGCATaGGTGCCCAAACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHGTTSA*VPKPST
Trigger: CGTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTATTGCTCCGGGGTCATaGTGTAAGGCACCAGCGAAA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSIAPGS*CKAPAK
Trigger: TTTCGCTGGTGCCTTACACCATGACCCCGGAGCAAT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHRGVGS*VVGGTI
Trigger: TATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGATGTTAAGAATAGATaGCGATCTCTCCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRDVKNR*RSLLLG
Trigger: GCCCAACAGGAGAGATCGCCATCTATTCTTAACATC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAATCCCCTAGTACAATaGCCCAAATCACCACAACTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRINPLVQ*PKSPQL
Trigger: CAGTTGTGGTGATTTGGGCCATTGTACTAGGGGATT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGTAACCACACTGATGTaGCTGTCATTTCACAAGAGC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIVTTLM*LSFHKS
Trigger: GCTCTTGTGAAATGACAGCCACATCAGTGTGGTTAC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTGGGTAAGGAATTGTaGAACTGCGGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLGKEL*NCGSAR
Trigger: CCTGGCAGAACCGCAGTTCCACAATTCCTTACCCAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCCCATAGAACTACTGTaGGCACTTATCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDPIELL*ALISLW
Trigger: CCACAGTGAGATAAGTGCTCACAGTAGTTCTATGGG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACCCATAGAACTACTGTaGGCACTTATCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTPIELL*ALISLW
Trigger: CCACAGTGAGATAAGTGCTCACAGTAGTTCTATGGG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTGTCTCAACCACGGGTaGTTTGATGCACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFCLNHG*FDALFM
Trigger: CATGAAGAGTGCATCAAATCACCCGTGGTTGAGACA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTGTCTCAACCACGGGTaGTTTGATGCACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDCLNHG*FDALFM
Trigger: CATGAAGAGTGCATCAAATCACCCGTGGTTGAGACA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCATCTTCAGCTTGAATaGACATGCGGCTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRHLQLE*TCGCSF
Trigger: AAATGAACAGCCGCATGTTCATTCAAGCTGAAGATG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGGTCCTCAGAGTGGTaGAGGAAAATAGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRSSEW*RKIGHF
Trigger: AAAATGACCTATTTTCCTTCACCACTCTGAGGACCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTATTGGCCATTGCCTaGAATCTGTCATTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLLAIA*NLSFSK
Trigger: CTTAGAGAATGACAGATTTCAGGCAATGGCCAATAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTATTGGCCATTGCCTaGAATCTGTCATTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILLAIA*NLSFSK
Trigger: CTTAGAGAATGACAGATTTCAGGCAATGGCCAATAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGGGCAGCTCTTTGTTaGATAGAACGGCTATTAATG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRWAALC*IERLLM
Trigger: CATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGCCAGGGCTGGAGCATaGAGCTTTGCAATTGATAGT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSARAGA*SFAIDS
Trigger: ACTATCAATTGCAAAGCTTCATGCTCCAGCCCTGGC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAAAGGAAATTGGGAATaGCAAAGGAGATGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRKGNWE*QRRCKL
Trigger: CAGCTTGCATCTCCTTTGTCATTCCCAATTTCCTTT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGAGTCAAATCCTCCTTaGAACTGTCTGATAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRESNPP*NCLIGV
Trigger: AACTCCTATCAGACAGTTTCAAGGAGGATTTGACTC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGAGTCAAATCCTCCTTaGAACTGTCTGATAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRESNPP*NCLIGV
Trigger: AACTCCTATCAGACAGTTTCAAGGAGGATTTGACTC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGGAGAAAGGAAACATTaGTTTCGGGGGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDGERKH*FRGCSS
Trigger: TGAGGAACACCCCCGAAATCAATGTTTCCTTTCTCC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGGAGAAAGGAAACATTaGTTTCGGGGGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFGERKH*FRGCSS
Trigger: TGAGGAACACCCCCGAAATCAATGTTTCCTTTCTCC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTGGTTCAACACAGACTaGAGGATAACACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDWFNTD*RITPKS
Trigger: GGACTTGGGTGTTATCCTTCAGTCTGTGTTGAACCA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATGGTTCAACACAGACTaGAGGATAACACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTWFNTD*RITPKS
Trigger: GGACTTGGGTGTTATCCTTCAGTCTGTGTTGAACCA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGACCATTCCCAATATCTaGATGGTTCAACACAGACTG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRTIPNI*MVQHRL
Trigger: CAGTCTGTGTTGAACCATTCAGATATTGGGAATGGT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGTGTGGACTGGAGTTaGTTTTCCTCCTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRICVDWS*FSSFST
Trigger: AGTTGAAAAGGAGGAAAATCAACTCCAGTCCACACA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGTGTGGACTGGAGTTaGTTTTCCTCCTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRCVDWS*FSSFST
Trigger: AGTTGAAAAGGAGGAAAATCAACTCCAGTCCACACA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATGGCTCGGAGTTCGTaGTTTTCTTCCACGTCAATC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDMARSS*FSSTSI
Trigger: GATTGACGTGGAAGAAAAGCACGAACTCCGAGCCAT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTAGCGTGGGGATTTGCTaGTCTCGGTTTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSVGIC*SRFFSS
Trigger: ACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTCAGCGTGGGGATTTaGTGCTCTCGGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSFSVGI*CSRFFS
Trigger: GGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAATTCTTCAGCCGACTaGAGGTGCAGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVNSSAD*RCSTAA
Trigger: GGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATTTCGTGAACGGCGGTaGCATCAGAATAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIFRERR*HQNNKE
Trigger: TTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAAAGAAGCATTCTTTaGATGGCTTTCGTGAACGGC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKRSIL*MAFVNG
Trigger: GCCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAGGATATAAACTATTaGAGGGCACACCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQDINY*RAHRYH
Trigger: ATGATAGCGGTGTGCCCTGCAATAGTTTATATCCTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGACTGTCACCATTCAATaGAGAGACAAACCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRTVTIQ*RDKPFL
Trigger: CAAGAAGGGTTTGTCTCTGCATTGAATGGTGACAGT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAACTGTCACCATTCAATaGAGAGACAAACCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRITVTIQ*RDKPFL
Trigger: CAAGAAGGGTTTGTCTCTGCATTGAATGGTGACAGT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRITVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGGGGCAGAAACCAACTaGACAGTGGAAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHGAETN*TVEELP
Trigger: TGGCAGCTCTTCCACTGTGCAGTTGGTTTCTGCCCC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCTACCCTTCAGCTTTaGTCAGGCTGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSTLQL*SGWSWL
Trigger: GAGCCAGCTCCAGCCTGAGCAAAGCTGAAGGGTAGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATCTCTGTTTTCCACCTaGTGCAAAGTGATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISLFST*CKVMSL
Trigger: CAAAGACATCACTTTGCAGCAGGTGGAAAACAGAGA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAATCACCACAACTGTTaGCAGGTGCCTAACCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFNHHNC*QVPNPQ
Trigger: TTGAGGGTTAGGCACCTGGCAACAGTTGTGGTGATT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTCGTGAGAGGCGGATaGCTCGGAGTTCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLVRGG*LGVRAF
Trigger: AAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTCGTGAGAGGCGGATaGCTCGGAGTTCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLVRGG*LGVRAF
Trigger: AAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTCGTGAGAGGCGGATaGCTCGGAGTTCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLVRGG*LGVRAF
Trigger: AAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTTAGTGCAGCCGCATaGGAAAGACATACGATCCAC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFSAAA*ERHTIH
Trigger: GTGGATCGTATGTCTTTCCCATGCGGCTGCACTAAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTTAGTGCAGCCGCATaGGAAAGACATACGATCCAC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFSAAA*ERHTIH
Trigger: GTGGATCGTATGTCTTTCCCATGCGGCTGCACTAAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGCACTTATCTCACTGTaGCAGCCATTCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLALISL*QPFSVG
Trigger: CCCCACGCTGAATGGCTGCCACAGTGAGATAAGTGC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAGACAAACCCTTCTTaGGAGGGGCCTTTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTETNPS*EGPFKY
Trigger: ATACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTGATCTACACAGATTaGCAGGTTTCACACAGTTTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILIYTD*QVSHSL
Trigger: CAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCAGATGCAATCCATGTaGGCATGCTCTGTGGAACTA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFQMQSM*ACSVEL
Trigger: TAGTTCCACAGAGCATGCCCACATGGATTGCATCTG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCGCTGGAGAAAAGGCTaGTTGCTGAGGTCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHRWRKG*LLRSCL
Trigger: GAGACACGACCTCAGCAACCAGCCTTTTCTCCAGCG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGTATGCAATGCATTCTaGACTGTTCTGCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRVCNAF*TVLLVV
Trigger: GACAACTAGCAGAACAGTCCAGAATGCATTGCATAC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAGCTTTGCTCAGGCTaGAGCTGGCTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQLCSG*SWLFPT
Trigger: AGTGGGGAAGAGCCAGCTCCAGCCTGAGCAAAGCTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGGGTAGCCTGTGTATGTaGTTTGTGGGATATGTTTAC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRGSLCM*FVGYVY
Trigger: GTAAACATATCCCACAAACCACATACACAGGCTACC...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGGCTAGATATACTATaGAGGCAATACAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRWLDIL*RQYNSC
Trigger: GCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGATGAGCTGTGCTGTTaGTGCAGAGCTACAGCATTT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDDELCC*CRATAF
Trigger: AAATGCTGTAGCTCTGCACCAACAGCACAGCTCATC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTCCCACAGGAGGAGTaGAAAAACTTTGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILPQEE*KNFGFL
Trigger: TAAGAATCCAAAGTTTTTCCACTCCTCCTGTGGGAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGTTCTGACTCTGAGTTaGGTGTCAACTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFVLTLS*VSTLSR
Trigger: TCTGCTCAGAGTTGACACCCAACTCAGAGTCAGAAC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAGAGCATCCGAGTTTaGGAGATATGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKSIRV*EICSCT
Trigger: GGTACAGCTGCATATCTCCCAAACTCGGATGCTCTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGACTCCAGTATTTTCCTaGAGATTCTATGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRTPVFS*RFYASE
Trigger: TTCAGAGGCATAGAATCTTCAGGAAAATACTGGAGT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGAGGAAGGGGTAAAATaGCTAGAAGTGGATGGATTG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFEEGVK*LEVDGL
Trigger: CAATCCATCCACTTCTAGTCATTTTACCCCTTCCTC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAGGAAGGGGTAAAATaGCTAGAAGTGGATGGATTG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTEEGVK*LEVDGL
Trigger: CAATCCATCCACTTCTAGTCATTTTACCCCTTCCTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAATTGTGTGCAAAAAGTaGGTCCGAACACGGATAGGA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTIVCKK*VRTRIG
Trigger: TCCTATCCGTGTTCGGACTCACTTTTTGCACACAAT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTTTGCATGGCTTTCGTaGACGGCGGTGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHFAWLS*TAVPSE
Trigger: TTCTGATGGCACCGCCGTTCACGAAAGCCATGCAAA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTCAGCAGGATGCTCTaGAATGTGACTGTCACCATT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFSRML*NVTVTI
Trigger: AATGGTGACAGTCACATTTCAGAGCATCCTGCTGAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAACCACGGGTGATTTaGTGCACTCTTCATGCAATA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQPRVI*CTLHAI
Trigger: TATTGCATGAAGAGTGCATCAAATCACCCGTGGTTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGAAAAGGCTGGTTGCTaGGGTCGTGTCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLEKAGC*GRVSSM
Trigger: CATGGAAGAGACACGACCTCAGCAACCAGCCTTTTC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFVEMD*SRWRKG
Trigger: GCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFVEMD*SRWRKG
Trigger: GCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTTTCATGTGCTTGAATaGAGGAACAATAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRFHVLE*RNNSLL
Trigger: CAAGAGGCTATTGTTCCTTCATTCAAGCACATGAAA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLLTGQ*LSTLDK
Trigger: TTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGAGCACCAACTGGGCTaGAAGGGTGTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVEHQLG*KGVHIV
Trigger: TACAATGTGGACACCCTTTCAGCCCAGTTGGTGCTC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGAGCACCAACTGGGCTaGAAGGGTGTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHEHQLG*KGVHIV
Trigger: TACAATGTGGACACCCTTTCAGCCCAGTTGGTGCTC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGTTGGTCAGCAGATGTaGGCACCAACTGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVVGQQM*APTGLK
Trigger: TTTCAGCCCAGTTGGTGCTCACATCTGCTGACCAAC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTCTATCACATTCCTTTaGAACTTTAGTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSITFL*NFSPAR
Trigger: TCTGGCAGGACTAAAGTTTCAAAGGAATGTGATAGA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGATGAAGGTCTCTGGTaGTACAAGTACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRDEGLW*YKYLDK
Trigger: TTTATCTAGGTACTTGTATCACCAGAGACCTTCATC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGATGAAGGTCTCTGGTaGTACAAGTACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIDEGLW*YKYLDK
Trigger: TTTATCTAGGTACTTGTATCACCAGAGACCTTCATC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAGCTTGGTGACCACATaGAAAGGAGGAGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSLVTT*KGGAKQ
Trigger: TTGTTTTGCTCCTCCTTTTCATGTGGTCACCAAGCT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGCTTGGTGACCACATaGAAAGGAGGAGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDSLVTT*KGGAKQ
Trigger: TTGTTTTGCTCCTCCTTTTCATGTGGTCACCAAGCT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGATCCCCATTTGGCATaGCTAGTGCCTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTDPHLA*LVPNES
Trigger: TGATTCATTAGGCACTAGTCATGCCAAATGGGGATC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTTTAAATCATTTTCCTaGCCCCTGAGAAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRFKSFS*PLRKQE
Trigger: TTCCTGCTTTCTCAGGGGTCAGGAAAATGATTTAAA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCCTCTCCTGCTCCCTTaGAAACTCGCCAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHPLLLP*KLAKSV
Trigger: TACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAATTCTTCAGCCGACTaGAGGTGCAGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTNSSAD*RCSTAA
Trigger: GGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAGAGACTGTATTTGTaGAATGCCACAGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQRLYL*NATVMW
Trigger: CCACATGACTGTGGCATTGCACAAATACAGTCTCTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAATCCATGTGGGCATaGTCTGTGGAACTAGCTATG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQSMWA*SVELAM
Trigger: CATAGCTAGTTCCACAGAGCATGCCCACATGGATTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGGGGCAGAAACCAACTaGACAGTGGAAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTGAETN*TVEELP
Trigger: TGGCAGCTCTTCCACTGTGCAGTTGGTTTCTGCCCC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATCTACCCTTCAGCTTTaGTCAGGCTGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSTLQL*SGWSWL
Trigger: GAGCCAGCTCCAGCCTGAGCAAAGCTGAAGGGTAGA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGCAATACAACAGCTaGAGGTCAGGTTATTGTGTC +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDRQYNS*RSGYCV
Trigger: GACACAATAACCTGACCTGCAGCTGTTGTATTGCCT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAAGGAGATGCAAGCTaGTTCAGCCACTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKGDAS*FSHLTF
Trigger: GAAAGTCAAGTGGCTGAAGCAGCTTGCATCTCCTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGAATTCAGGGAGTATTaGAGGGCCATATATGATTGT +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVREFREY*RAIYDC
Trigger: ACAATCATATATGGCCCTGCAATACTCCCTGAATTC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTACATCTGATGAGCTGTaGTGTTGGTGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSTSDEL*CWCRAT
Trigger: TGTAGCTCTGCACCAACAGCACAGCTCATCAGATGT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAACCGGTTTTACTCTaGTGCAAACAAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKPVLL*CKQMDK
Trigger: CTTGTCCATTTGTTTGCAGCAGAGTAAAACCGGTTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAAACCGGTTTTACTCTaGTGCAAACAAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRKPVLL*CKQMDK
Trigger: CTTGTCCATTTGTTTGCAGCAGAGTAAAACCGGTTT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATGACTAGAAGTGGATaGATTGACACTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDMTRSG*IDTVPT
Trigger: AGTGGGGACAGTGTCAATCCATCCACTTCTAGTCAT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGCAGGTGCACGTGTCTaGATCACAGAACACTCGGCA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTAGARV*ITEHSA
Trigger: TGCCGAGTGTTCTGTGATCCAGACACGTGCACCTGC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGACATACGATCCACCTaGCACTTAATGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVDIRST*HLMPAR
Trigger: CCTGGCTGGCATTAAGTGCCAGGTGGATCGTATGTC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATGCAGCACTGCAGCCTaGGGCTCAGTTTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLCSTAA*GSVSIS
Trigger: TGAGATTGAAACTGAGCCCCAGGCTGCAGTGCTGCA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTCCTCCTCCTCTCCTTaGCAATCTAATTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSSSSP*QSNSSA
Trigger: GGCTGAAGAATTAGATTGCCAAGGAGAGGAGGAGGA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGATTGCTCCGGGGTCATaGTGTAAGGCACCAGCGAAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVIAPGS*CKAPAK
Trigger: TTTCGCTGGTGCCTTACACCATGACCCCGGAGCAAT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCCACTTGAGGGTGATTaGACCTGTGTTCAGGATATA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDPLEGD*TCVQDI
Trigger: TATATCCTGAACACAGGTCCAATCACCCTCAAGTGG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGAGACAAACCCTTCTTaGGAGGGGCCTTTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSETNPS*EGPFKY
Trigger: ATACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAACCAACTGCACAGTaGAAGAGCTGCCAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKPTAQ*KSCQVN
Trigger: GTTTACTTGGCAGCTCTTCCACTGTGCAGTTGGTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATCTCTTTTCAGAAACTaGACTGTCATTCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISLFRN*TVILPF
Trigger: GAAGGGTAGAATGACAGTCCAGTTTCTGAAAAGAGA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGATGAGCTGTGCTGTTaGTGCAGAGCTACAGCATTT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSDELCC*CRATAF
Trigger: AAATGCTGTAGCTCTGCACCAACAGCACAGCTCATC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGATGTGAGCACCAACTaGGCTGAAAGGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHDVSTN*AERVST
Trigger: TGTGGACACCCTTTCAGCCCAGTTGGTGCTCACATC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGATGTGAGCACCAACTaGGCTGAAAGGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLDVSTN*AERVST
Trigger: TGTGGACACCCTTTCAGCCCAGTTGGTGCTCACATC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGATGTTAAGAATAGATaGCGATCTCTCCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFDVKNR*RSLLLG
Trigger: GCCCAACAGGAGAGATCGCCATCTATTCTTAACATC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAATCCCCTAGTACAATaGCCCAAATCACCACAACTG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDNPLVQ*PKSPQL
Trigger: CAGTTGTGGTGATTTGGGCCATTGTACTAGGGGATT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGTAACCACACTGATGTaGCTGTCATTTCACAAGAGC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTVTTLM*LSFHKS
Trigger: GCTCTTGTGAAATGACAGCCACATCAGTGTGGTTAC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGAATATTCTACGGAGTaGGCGACAGGGCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVEYSTE*ATGPIE
Trigger: TTCTATGGGCCCTGTCGCTCACTCCGTAGAATATTC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGAATATTCTACGGAGTaGGCGACAGGGCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHEYSTE*ATGPIE
Trigger: TTCTATGGGCCCTGTCGCTCACTCCGTAGAATATTC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAAAACTGTCTGCGATTaGATATTCTACGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFKTVCD*IFYGVS
Trigger: GCTCACTCCGTAGAATATTCAATCGCAGACAGTTTT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATTTGCATGGCTTTCGTaGACGGCGGTGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTFAWLS*TAVPSE
Trigger: TTCTGATGGCACCGCCGTTCACGAAAGCCATGCAAA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAAGGGTACCATTTTTaGCAGTGTCTCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKGYHF*QCLFQN
Trigger: ATTCTGAAAGAGACACTGTCAAAAATGGTACCCTTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAAGGGTACCATTTTTaGCAGTGTCTCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKGYHF*QCLFQN
Trigger: ATTCTGAAAGAGACACTGTCAAAAATGGTACCCTTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAAAATTTGGAGCTCTaGTCTACACAGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQNLEL*STQIGR
Trigger: CCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGGTCCTCAGAGTGGTaGAGGAAAATAGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRSSEW*RKIGHF
Trigger: AAAATGACCTATTTTCCTTCACCACTCTGAGGACCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTCCTCTGCATTTACTaGGTTAGGTCCTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLLCIY*VRSSEW
Trigger: CCACTCTGAGGACCTAACTCAGTAAATGCAGAGGAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAACAAATCCTCATTCTaGTTAGCCCAAAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDNKSSF*LAQRAN
Trigger: ATTGGCCCTTTGGGCTAATCAGAATGAGGATTTGTT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAAATACAGTACACATaGTCCTTTCATGTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQIQYT*SFHVLE
Trigger: TTCAAGCACATGAAAGGATCATGTGTACTGTATTTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTTCTCACAGGGCAGTaGCTTTCTACCCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLLTGQ*LSTLDK
Trigger: TTTATCTAGGGTAGAAAGTCACTGCCCTGTGAGAAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGCCAGGGCTGGAGCATaGAGCTTTGCAATTGATAGT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLARAGA*SFAIDS
Trigger: ACTATCAATTGCAAAGCTTCATGCTCCAGCCCTGGC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAATGTGGCTGTCACATTaGGAAAATGGTTTTATCACA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIMWLSH*ENGFIT
Trigger: TGTGATAAAACCATTTTCTCAATGTGACAGCCACAT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGTCCTAGCTGAGTCCTaGTTTAATTCATACATTTCA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRVLAES*FNSYIS
Trigger: TGAAATGTATGAATTAAATCAGGACTCAGCTAGGAC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTCCTGGGTTATGCATaGGTCAAATCCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTFLGYA*VKSSLK
Trigger: TTTCAAGGAGGATTTGACTCATGCATAACCCAGGAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTCCACCTGCTAATTTaGTGGTTTGTAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFHLLI*WFVTPA
Trigger: AGCTGGAGTTACAAACCATCAAATTAGCAGGTGGAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGAGCACCAACTGGGCTaGAAGGGTGTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTEHQLG*KGVHIV
Trigger: TACAATGTGGACACCCTTTCAGCCCAGTTGGTGCTC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTTTAAGGACTCACGTTaGATATCTAGATTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRFKDSR*ISRFGR
Trigger: CCTACCAAATCTAGATATTCAACGTGAGTCCTTAAA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTTACATCTTTGAAATaGCCTCATTTCCCATGGATA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLTSLK*PHFPWI
Trigger: TATCCATGGGAAATGAGGTCATTTCAAAGATGTAAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTTACATCTTTGAAATaGCCTCATTTCCCATGGATA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLTSLK*PHFPWI
Trigger: TATCCATGGGAAATGAGGTCATTTCAAAGATGTAAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAGAGATGACATAAAGTaGCACAGTGAAGTTGACATT +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRRDDIK*HSEVDI
Trigger: AATGTCAACTTCACTGTGTCACTTTATGTCATCTCT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCACAGTTGGCCATTGTaGGTATCTTTGAAAAGATTA +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRHSWPL*VSLKRL
Trigger: TAATCTTTTCAAAGATACTCACAATGGCCAACTGTG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACATTTTCCTGACCCCTaGGAAAGCAGGAAGCCATTG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLHFPDP*ESRKPL
Trigger: CAATGGCTTCCTGCTTTCTCAGGGGTCAGGAAAATG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGCGTGGGGATTTGCTaGTCTCGGTTTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSVGIC*SRFFSS
Trigger: ACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTCCGCTGCAAAAGCTaGTCCCATCCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLRCKS*SHPPLL
Trigger: AAGAAGAGGAGGATGGGAGCAGCTTTTGCAGCGGAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTTCGTGAACGGCGGTaGCATCAGAATAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFRERR*HQNNKE
Trigger: TTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTTCGTGAACGGCGGTaGCATCAGAATAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFRERR*HQNNKE
Trigger: TTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAAAGAAGCATTCTTTaGATGGCTTTCGTGAACGGC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKRSIL*MAFVNG
Trigger: GCCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAAC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTIGLF*LSGIVN
Trigger: GTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCAGGATATAAACTATTaGAGGGCACACCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFQDINY*RAHRYH
Trigger: ATGATAGCGGTGTGCCCTGCAATAGTTTATATCCTG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAGGATATAAACTATTaGAGGGCACACCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQDINY*RAHRYH
Trigger: ATGATAGCGGTGTGCCCTGCAATAGTTTATATCCTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTACTGTCACCATTCAATaGAGAGACAAACCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFTVTIQ*RDKPFL
Trigger: CAAGAAGGGTTTGTCTCTGCATTGAATGGTGACAGT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATTGATGCACTCTTCATaGAATATGCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILMHSS*NMLFSA
Trigger: TGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTTVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTCTAAAGGTGGGGAGTaGATGTTTTATTTCTATCTG +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSKGGE*MFYFYL
Trigger: CAGATAGAAATAAAACATGCACTCCCCACCTTTAGA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTGACTATTGGCCATTaGCTGAAATCTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLTIGH*LKSVIL
Trigger: GAGAATGACAGATTTCAGGCAATGGCCAATAGTCAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTGACTATTGGCCATTaGCTGAAATCTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLTIGH*LKSVIL
Trigger: GAGAATGACAGATTTCAGGCAATGGCCAATAGTCAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTCTCTGTTTTCCACCTaGTGCAAAGTGATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSLFST*CKVMSL
Trigger: CAAAGACATCACTTTGCAGCAGGTGGAAAACAGAGA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTTATTAAGCTTTTATTaGGTCCTCACTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLLSFY*VLTSTL
Trigger: CAGAGTGGAAGTGAGGACGCAATAAAAGCTTAATAA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATTATTAAGCTTTTATTaGGTCCTCACTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILLSFY*VLTSTL
Trigger: CAGAGTGGAAGTGAGGACGCAATAAAAGCTTAATAA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACGAGTTTGGGAGATATaGAGCTGTACCAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTRVWEI*SCTKIE
Trigger: TTCAATCTTGGTACAGCTGCATATCTCCCAAACTCG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCGAGTTTGGGAGATATaGAGCTGTACCAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRVWEI*SCTKIE
Trigger: TTCAATCTTGGTACAGCTGCATATCTCCCAAACTCG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAAGGAATTGTGGAACTaGGGTTCTGCCAGGCTACCT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLKELWN*GSARLP
Trigger: AGGTAGCCTGGCAGAACCGCAGTTCCACAATTCCTT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACAGCTAGTCACTAAGTaGAAATCTCATTATACACTG +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIQLVTK*KSHYTL
Trigger: CAGTGTATAATGAGATTTCCACTTAGTGACTAGCTG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTGGTAGCCTGTGTATGTaGTTTGTGGGATATGTTTAC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFGSLCM*FVGYVY
Trigger: GTAAACATATCCCACAAACCACATACACAGGCTACC...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTGGCTAGATATACTATaGAGGCAATACAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFWLDIL*RQYNSC
Trigger: GCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTTCCCATTAAAGCCTaGTATTTAATACACTGGCTA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLPIKA*YLIHWL
Trigger: TAGCCAGTGTATTAAATACCAGGCTTTAATGGGAAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCAAGCCTTTAAACTTTaGGTTTTGGTTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRQAFKL*VLVVVR
Trigger: TCTTACCACAACCAAAACCCAAAGTTTAAAGGCTTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATCAGATGGTAACCCATaGCAGTGGGCTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSDGNP*QWALFV
Trigger: AACAAATAAAGCCCACTGCCATGGGTTACCATCTGA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTCCCACAGGAGGAGTaGAAAAACTTTGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLPQEE*KNFGFL
Trigger: TAAGAATCCAAAGTTTTTCCACTCCTCCTGTGGGAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGTACCAAATTTCTATaGCAGTTGGAAAGTGAGACA +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRICTKFL*QLESET
Trigger: TGTCTCACTTTCCAACTGCCATAGAAATTTGGTACA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCCAGTATTTTCCTaGAGATTCTATGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDTPVFS*RFYASE
Trigger: TTCAGAGGCATAGAATCTTCAGGAAAATACTGGAGT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTGTCACATGTACCTTaGGATCTCAGGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLSHVP*DLRNSS
Trigger: ACTGGAGTTCCTGAGATCTCAAGGTACATGTGACAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTGTCACATGTACCTTaGGATCTCAGGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLSHVP*DLRNSS
Trigger: ACTGGAGTTCCTGAGATCTCAAGGTACATGTGACAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCCCATAGAACTACTGTaGGCACTTATCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVPIELL*ALISLW
Trigger: CCACAGTGAGATAAGTGCTCACAGTAGTTCTATGGG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGAATATTCTACGGAGTaGGCGACAGGGCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTEYSTE*ATGPIE
Trigger: TTCTATGGGCCCTGTCGCTCACTCCGTAGAATATTC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTGTCTCAACCACGGGTaGTTTGATGCACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVCLNHG*FDALFM
Trigger: CATGAAGAGTGCATCAAATCACCCGTGGTTGAGACA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAGGTTTCACACAGTTTaGCAGGTAGGCAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVRFHTV*QVGNCE
Trigger: CTCACAGTTGCCTACCTGTCAAACTGTGTGAAACCT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTTCATGTGCTTGAATaGAGGAACAATAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFHVLE*RNNSLL
Trigger: CAAGAGGCTATTGTTCCTTCATTCAAGCACATGAAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTATTGGCCATTGCCTaGAATCTGTCATTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLLAIA*NLSFSK
Trigger: CTTAGAGAATGACAGATTTCAGGCAATGGCCAATAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTAAAGGAAATTGGGAATaGCAAAGGAGATGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSKGNWE*QRRCKL
Trigger: CAGCTTGCATCTCCTTTGTCATTCCCAATTTCCTTT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGGATTTGAGAAAGCTTaGTTATTTCATGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDGFEKA*LFHATL
Trigger: AAGGGTGGCATGAAATAATCAAGCTTTCTCAAATCC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGAGTCAAATCCTCCTTaGAACTGTCTGATAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSESNPP*NCLIGV
Trigger: AACTCCTATCAGACAGTTTCAAGGAGGATTTGACTC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTCCTGGGTTATGCATaGGTCAAATCCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSFLGYA*VKSSLK
Trigger: TTTCAAGGAGGATTTGACTCATGCATAACCCAGGAA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATCTCCTGTTGGCTTCTaGGAATATAAATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSPVGF*EYKFST
Trigger: GGTGGAAAATTTATATTCTCAGAAGCCAACAGGAGA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGACAAGTCTTGCCTTTaGAAGCACAAAGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLDKSCL*KHKGAS
Trigger: GGAAGCACCTTTGTGCTTTCAAAGGCAAGACTTGTC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCGTGACTTACATCTTTaGAATGACCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRDLHL*NDLISH
Trigger: ATGGGAAATGAGGTCATTTCAAAGATGTAAGTCACG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTCTATCACATTCCTTTaGAACTTTAGTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDSITFL*NFSPAR
Trigger: TCTGGCAGGACTAAAGTTTCAAAGGAATGTGATAGA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTTAAATCATTTTCCTaGCCCCTGAGAAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFKSFS*PLRKQE
Trigger: TTCCTGCTTTCTCAGGGGTCAGGAAAATGATTTAAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTTAAATCATTTTCCTaGCCCCTGAGAAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFKSFS*PLRKQE
Trigger: TTCCTGCTTTCTCAGGGGTCAGGAAAATGATTTAAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGGAGAAAGGAAACATTaGTTTCGGGGGTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVGERKH*FRGCSS
Trigger: TGAGGAACACCCCCGAAATCAATGTTTCCTTTCTCC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCATCTTAATGTAACATaGCTGTATGTGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFHLNVT*LYVWTG
Trigger: TCCAGTCCACACATACAGTCATGTTACATTAAGATG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGATGGCTCGGAGTTCGTaGTTTTCTTCCACGTCAATC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVMARSS*FSSTSI
Trigger: GATTGACGTGGAAGAAAAGCACGAACTCCGAGCCAT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAATTCAATTCTACCTaGTGTGTTACTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKFNST*CVTTSF
Trigger: GAAGGATGTAGTAACACAGCAGGTAGAATTGAATTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAAATTCAATTCTACCTaGTGTGTTACTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIKFNST*CVTTSF
Trigger: GAAGGATGTAGTAACACAGCAGGTAGAATTGAATTT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCTTCATGCAATATaGTCTTTTCTGCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDTLHAI*SFLQGS
Trigger: TGAGCCTTGCAGAAAAGAGCATATTGCATGAAGAGT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAACTCTTCATGCAATATaGTCTTTTCTGCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTTLHAI*SFLQGS
Trigger: TGAGCCTTGCAGAAAAGAGCATATTGCATGAAGAGT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAATTCAGGGAGTATTaGAGGGCCATATATGATTGT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTEFREY*RAIYDC
Trigger: ACAATCATATATGGCCCTGCAATACTCCCTGAATTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAATGTTTCCTGGGTTATaGATGAGTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTMFPGL*MSQILL
Trigger: AAGGAGGATTTGACTCATGCATAACCCAGGAAACAT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTATGTTTCCTGGGTTATaGATGAGTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFMFPGL*MSQILL
Trigger: AAGGAGGATTTGACTCATGCATAACCCAGGAAACAT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACATCTGATGAGCTGTaGTGTTGGTGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTSDEL*CWCRAT
Trigger: TGTAGCTCTGCACCAACAGCACAGCTCATCAGATGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAGAGCTGAATTGTGTTaGCAAGGAAACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLRAELC*QGNCLP
Trigger: GGGAAGGCAGTTTCCTTGGCAACACAATTCAGCTCT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAATCACCACAACTGTTaGCAGGTGCCTAACCCTCAA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLNHHNC*QVPNPQ
Trigger: TTGAGGGTTAGGCACCTGGCAACAGTTGTGGTGATT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAACCGGTTTTACTCTaGTGCAAACAAATGGACAAG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKPVLL*CKQMDK
Trigger: CTTGTCCATTTGTTTGCAGCAGAGTAAAACCGGTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAGACTCATTACCTACTaGTTGCTGCACGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTRLITY*LLHGIS
Trigger: GCTGATGCCGTGCAGCAAGCAGTAGGTAATGAGTCT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGCTGCAAAACACTGCTaGAGAGAACCCCAGTACATT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLAAKHC*REPQYI
Trigger: AATGTACTGGGGTTCTCTGCAGCAGTGTTTTGCAGC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCACACTTCATTTAACTaGTGCAAAACACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSHTSFN*CKTLLQ
Trigger: CTGCAGCAGTGTTTTGCAGCAGTTAAATGAAGTGTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTTTAGTGCAGCCGCATaGGAAAGACATACGATCCAC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHFSAAA*ERHTIH
Trigger: GTGGATCGTATGTCTTTCCCATGCGGCTGCACTAAA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCCTCCTCCTCTCCTTaGCAATCTAATTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSSSSP*QSNSSA
Trigger: GGCTGAAGAATTAGATTGCCAAGGAGAGGAGGAGGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCCTCCTCCTCTCCTTaGCAATCTAATTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSSSSP*QSNSSA
Trigger: GGCTGAAGAATTAGATTGCCAAGGAGAGGAGGAGGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAACAGAGTTGAAGAGTTaGCATAAAAAGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: RIHSPGSHHSTGITTLRITELKS*HKKKHS
Trigger: AGAATGCTTCTTTTTATGCCAACTCTTCAACTCTGT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGACAGAGTTGAAGAGTTaGCATAAAAAGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRTELKS*HKKKHS
Trigger: AGAATGCTTCTTTTTATGCCAACTCTTCAACTCTGT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAGATGCAATCCATGTaGGCATGCTCTGTGGAACTA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQMQSM*ACSVEL
Trigger: TAGTTCCACAGAGCATGCCCACATGGATTGCATCTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGTATGCAATGCATTCTaGACTGTTCTGCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSVCNAF*TVLLVV
Trigger: GACAACTAGCAGAACAGTCCAGAATGCATTGCATAC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGGTAGCCTGTGTATGTaGTTTGTGGGATATGTTTAC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSGSLCM*FVGYVY
Trigger: GTAAACATATCCCACAAACCACATACACAGGCTACC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCAATACTGACTATTaGCCATTGCCTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLNTDY*PLPEIC
Trigger: ACAGATTTCAGGCAATGGCCAATAGTCAGTATTGAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTCAATACTGACTATTaGCCATTGCCTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLNTDY*PLPEIC
Trigger: ACAGATTTCAGGCAATGGCCAATAGTCAGTATTGAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGAGCTACAGCATTTTaGCTTAGGCATTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRATAF*LRHFCY
Trigger: ATAACAAAAATGCCTAAGCCAAAATGCTGTAGCTCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTCAGATGGTAACCCATaGCAGTGGGCTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSDGNP*QWALFV
Trigger: AACAAATAAAGCCCACTGCCATGGGTTACCATCTGA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGTTCTGACTCTGAGTTaGGTGTCAACTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHVLTLS*VSTLSR
Trigger: TCTGCTCAGAGTTGACACCCAACTCAGAGTCAGAAC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAGAGCATCCGAGTTTaGGAGATATGCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKSIRV*EICSCT
Trigger: GGTACAGCTGCATATCTCCCAAACTCGGATGCTCTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCAAAGCCTCCGAGCTaGTCTCATTTGCATAAGGCT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSKPPS*SHLHKA
Trigger: AGCCTTATGCAAATGAGACCAGCTCGGAGGCTTTGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTAAAACTGAACGATTaGCACTATCAACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLKLND*HYQHSQ
Trigger: CTGAGAGTGTTGATAGTGTCAATCGTTCAGTTTTAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAGTGCTGGCTTCTTCTaGTTCTACTGTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSAGFF*FYCAIL
Trigger: AAGAATGGCACAGTAGAATCAGAAGAAGCCAGCACT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTGCTGGCTTCTTCTaGTTCTACTGTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSAGFF*FYCAIL
Trigger: AAGAATGGCACAGTAGAATCAGAAGAAGCCAGCACT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGATTGTGTGCAAAAAGTaGGTCCGAACACGGATAGGA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVIVCKK*VRTRIG
Trigger: TCCTATCCGTGTTCGGACTCACTTTTTGCACACAAT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAGGGTACCATTTTTaGCAGTGTCTCTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDKGYHF*QCLFQN
Trigger: ATTCTGAAAGAGACACTGTCAAAAATGGTACCCTTT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTCAGCAGGATGCTCTaGAATGTGACTGTCACCATT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVFSRML*NVTVTI
Trigger: AATGGTGACAGTCACATTTCAGAGCATCCTGCTGAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTTCAGCAGGATGCTCTaGAATGTGACTGTCACCATT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHFSRML*NVTVTI
Trigger: AATGGTGACAGTCACATTTCAGAGCATCCTGCTGAA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAACCACGGGTGATTTaGTGCACTCTTCATGCAATA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQPRVI*CTLHAI
Trigger: TATTGCATGAAGAGTGCATCAAATCACCCGTGGTTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCAAAATTTGGAGCTCTaGTCTACACAGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHQNLEL*STQIGR
Trigger: CCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCAAAATTTGGAGCTCTaGTCTACACAGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVQNLEL*STQIGR
Trigger: CCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTATGCATCTTCAGCTTaGATGAACATGCGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVYASSA*MNMRLF
Trigger: GAACAGCCGCATGTTCATTCAAGCTGAAGATGCATA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATTTGTAGAGATGGATTaGTCACGCTGGAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLFVEMD*SRWRKG
Trigger: GCCTTTTCTCCAGCGTGATCAATCCATCTCTACAAA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCAAATACAGTACACATaGTCCTTTCATGTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDQIQYT*SFHVLE
Trigger: TTCAAGCACATGAAAGGATCATGTGTACTGTATTTG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGGATTTGAGAAAGCTTaGTTATTTCATGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSGFEKA*LFHATL
Trigger: AAGGGTGGCATGAAATAATCAAGCTTTCTCAAATCC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGTCCTAGCTGAGTCCTaGTTTAATTCATACATTTCA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDVLAES*FNSYIS
Trigger: TGAAATGTATGAATTAAATCAGGACTCAGCTAGGAC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTTAAGGACTCACGTTaGATATCTAGATTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTFKDSR*ISRFGR
Trigger: CCTACCAAATCTAGATATTCAACGTGAGTCCTTAAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTATTGTTTTAGGCTTTaGATCTGGTCGTATTCACTC +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFYCFRL*IWSYSL
Trigger: GAGTGAATACGACCAGATTCAAAGCCTAAAACAATA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAGATGACATAAAGTaGCACAGTGAAGTTGACATT +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDRDDIK*HSEVDI
Trigger: AATGTCAACTTCACTGTGTCACTTTATGTCATCTCT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGATCCCCATTTGGCATaGCTAGTGCCTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVDPHLA*LVPNES
Trigger: TGATTCATTAGGCACTAGTCATGCCAAATGGGGATC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACACAGTTGGCCATTGTaGGTATCTTTGAAAAGATTA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTHSWPL*VSLKRL
Trigger: TAATCTTTTCAAAGATACTCACAATGGCCAACTGTG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATGGTTCAACACAGACTaGAGGATAACACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTWFNTD*RITPKS
Trigger: GGACTTGGGTGTTATCCTTCAGTCTGTGTTGAACCA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATTGATGCACTCTTCATaGAATATGCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLMHSS*NMLFSA
Trigger: TGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAGAGACTGTATTTGTaGAATGCCACAGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQRLYL*NATVMW
Trigger: CCACATGACTGTGGCATTGCACAAATACAGTCTCTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAATCCATGTGGGCATaGTCTGTGGAACTAGCTATG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQSMWA*SVELAM
Trigger: CATAGCTAGTTCCACAGAGCATGCCCACATGGATTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAGGCAATACAACAGCTaGAGGTCAGGTTATTGTGTC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLRQYNS*RSGYCV
Trigger: GACACAATAACCTGACCTGCAGCTGTTGTATTGCCT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAGGCAATACAACAGCTaGAGGTCAGGTTATTGTGTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVRQYNS*RSGYCV
Trigger: GACACAATAACCTGACCTGCAGCTGTTGTATTGCCT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAAGGAGATGCAAGCTaGTTCAGCCACTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKGDAS*FSHLTF
Trigger: GAAAGTCAAGTGGCTGAAGCAGCTTGCATCTCCTTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGAATTCAGGGAGTATTaGAGGGCCATATATGATTGT +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSEFREY*RAIYDC
Trigger: ACAATCATATATGGCCCTGCAATACTCCCTGAATTC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAATCACCACAACTGTTaGCAGGTGCCTAACCCTCAA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTNHHNC*QVPNPQ
Trigger: TTGAGGGTTAGGCACCTGGCAACAGTTGTGGTGATT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACATGACTAGAAGTGGATaGATTGACACTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHMTRSG*IDTVPT
Trigger: AGTGGGGACAGTGTCAATCCATCCACTTCTAGTCAT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCCACTTGAGGGTGATTaGACCTGTGTTCAGGATATA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHPLEGD*TCVQDI
Trigger: TATATCCTGAACACAGGTCCAATCACCCTCAAGTGG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACCACTTGAGGGTGATTaGACCTGTGTTCAGGATATA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLPLEGD*TCVQDI
Trigger: TATATCCTGAACACAGGTCCAATCACCCTCAAGTGG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGAGACAAACCCTTCTTaGGAGGGGCCTTTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTETNPS*EGPFKY
Trigger: ATACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAACCAACTGCACAGTaGAAGAGCTGCCAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKPTAQ*KSCQVN
Trigger: GTTTACTTGGCAGCTCTTCCACTGTGCAGTTGGTTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAAACCAACTGCACAGTaGAAGAGCTGCCAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHKPTAQ*KSCQVN
Trigger: GTTTACTTGGCAGCTCTTCCACTGTGCAGTTGGTTT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTCTCTTTTCAGAAACTaGACTGTCATTCTACCCTTC +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSLFRN*TVILPF
Trigger: GAAGGGTAGAATGACAGTCCAGTTTCTGAAAAGAGA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTCAAAGACTACAGTTTaGCTAGATATACTATGGAGG +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDSKTTV*LDILWR
Trigger: CCTCCATAGTATATCTAGCCAAACTGTAGTCTTTGA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTGATAGGAGTTTGCTaGTGTAAATTTAGCATCACT +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLIGVC*CKFSIT
Trigger: AGTGATGCTAAATTTACACCAGCAAACTCCTATCAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCTTCCCATTAAAGCCTaGTATTTAATACACTGGCTA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFLPIKA*YLIHWL
Trigger: TAGCCAGTGTATTAAATACCAGGCTTTAATGGGAAG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACAAGCCTTTAAACTTTaGGTTTTGGTTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTQAFKL*VLVVVR
Trigger: TCTTACCACAACCAAAACCCAAAGTTTAAAGGCTTG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGATGTTAAGAATAGATaGCGATCTCTCCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVDVKNR*RSLLLG
Trigger: GCCCAACAGGAGAGATCGCCATCTATTCTTAACATC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAATCCCCTAGTACAATaGCCCAAATCACCACAACTG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLNPLVQ*PKSPQL
Trigger: CAGTTGTGGTGATTTGGGCCATTGTACTAGGGGATT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAAGGCTGGGATCAAATaGTGGCTGTGTAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHKAGIK*WLCKSL
Trigger: CAGAGATTTACACAGCCACCATTTGATCCCAGCCTT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAGGCTGGGATCAAATaGTGGCTGTGTAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKAGIK*WLCKSL
Trigger: CAGAGATTTACACAGCCACCATTTGATCCCAGCCTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGTAACCACACTGATGTaGCTGTCATTTCACAAGAGC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLVTTLM*LSFHKS
Trigger: GCTCTTGTGAAATGACAGCCACATCAGTGTGGTTAC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTGTACCAAATTTCTATaGCAGTTGGAAAGTGAGACA +
Preference number: 4 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDCTKFL*QLESET
Trigger: TGTCTCACTTTCCAACTGCCATAGAAATTTGGTACA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGCTGAAACGGAATGCTaGGTAAGGAATTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHAETEC*VRNCGT
Trigger: AGTTCCACAATTCCTTACCCAGCATTCCGTTTCAGC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAGTGCTGGCTTCTTCTaGTTCTACTGTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSAGFF*FYCAIL
Trigger: AAGAATGGCACAGTAGAATCAGAAGAAGCCAGCACT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAAAACTGTCTGCGATTaGATATTCTACGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHKTVCD*IFYGVS
Trigger: GCTCACTCCGTAGAATATTCAATCGCAGACAGTTTT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAACCACGGGTGATTTaGTGCACTCTTCATGCAATA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQPRVI*CTLHAI
Trigger: TATTGCATGAAGAGTGCATCAAATCACCCGTGGTTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAAAATTTGGAGCTCTaGTCTACACAGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQNLEL*STQIGR
Trigger: CCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCATCTTCAGCTTGAATaGACATGCGGCTGTTCATTT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHHLQLE*TCGCSF
Trigger: AAATGAACAGCCGCATGTTCATTCAAGCTGAAGATG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAACAAATCCTCATTCTaGTTAGCCCAAAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVNKSSF*LAQRAN
Trigger: ATTGGCCCTTTGGGCTAATCAGAATGAGGATTTGTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAACAAATCCTCATTCTaGTTAGCCCAAAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHNKSSF*LAQRAN
Trigger: ATTGGCCCTTTGGGCTAATCAGAATGAGGATTTGTT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTGGGCAGCTCTTTGTTaGATAGAACGGCTATTAATG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHWAALC*IERLLM
Trigger: CATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTCCTGGGTTATGCATaGGTCAAATCCTCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVFLGYA*VKSSLK
Trigger: TTTCAAGGAGGATTTGACTCATGCATAACCCAGGAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATTCCACCTGCTAATTTaGTGGTTTGTAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLFHLLI*WFVTPA
Trigger: AGCTGGAGTTACAAACCATCAAATTAGCAGGTGGAA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACCATTCCCAATATCTaGATGGTTCAACACAGACTG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTIPNI*MVQHRL
Trigger: CAGTCTGTGTTGAACCATTCAGATATTGGGAATGGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTGTGTGGACTGGAGTTaGTTTTCCTCCTTTTCAACT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHCVDWS*FSSFST
Trigger: AGTTGAAAAGGAGGAAAATCAACTCCAGTCCACACA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTTCGTGAACGGCGGTaGCATCAGAATAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVFRERR*HQNNKE
Trigger: TTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAAAAGAAGCATTCTTTaGATGGCTTTCGTGAACGGC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLKRSIL*MAFVNG
Trigger: GCCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACTGTCACCATTCAATaGAGAGACAAACCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTVTIQ*RDKPFL
Trigger: CAAGAAGGGTTTGTCTCTGCATTGAATGGTGACAGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGATGCACTCTTCATaGAATATGCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLMHSS*NMLFSA
Trigger: TGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVTVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACTGTATTTGTGCAATaGCACAGTCATGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTVFVQ*HSHVAR
Trigger: TCTAGCCACATGACTGTGGCATTGCACAAATACAGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTGACTATTGGCCATTaGCTGAAATCTGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLTIGH*LKSVIL
Trigger: GAGAATGACAGATTTCAGGCAATGGCCAATAGTCAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCTCTGTTTTCCACCTaGTGCAAAGTGATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSLFST*CKVMSL
Trigger: CAAAGACATCACTTTGCAGCAGGTGGAAAACAGAGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCGAGTTTGGGAGATATaGAGCTGTACCAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVRVWEI*SCTKIE
Trigger: TTCAATCTTGGTACAGCTGCATATCTCCCAAACTCG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTGTAGTCTTAGTCCTTaGACTCTTTATTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFCSLSP*TLYSLG
Trigger: TCCTAATGAATAAAGAGTGCAAGGACTAAGACTACA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTGATCTACACAGATTaGCAGGTTTCACACAGTTTG +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLIYTD*QVSHSL
Trigger: CAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAGCTAGTCACTAAGTaGAAATCTCATTATACACTG +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQLVTK*KSHYTL
Trigger: CAGTGTATAATGAGATTTCCACTTAGTGACTAGCTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGGTATGCAATGCATTCTaGACTGTTCTGCTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVVCNAF*TVLLVV
Trigger: GACAACTAGCAGAACAGTCCAGAATGCATTGCATAC...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTGGCTAGATATACTATaGAGGCAATACAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHWLDIL*RQYNSC
Trigger: GCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGAGCTACAGCATTTTaGCTTAGGCATTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRATAF*LRHFCY
Trigger: ATAACAAAAATGCCTAAGCCAAAATGCTGTAGCTCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATCAGATGGTAACCCATaGCAGTGGGCTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLSDGNP*QWALFV
Trigger: AACAAATAAAGCCCACTGCCATGGGTTACCATCTGA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAAGGCTGGGATCAAATaGTGGCTGTGTAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTKAGIK*WLCKSL
Trigger: CAGAGATTTACACAGCCACCATTTGATCCCAGCCTT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTGTACCAAATTTCTATaGCAGTTGGAAAGTGAGACA +
Preference number: 4 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSCTKFL*QLESET
Trigger: TGTCTCACTTTCCAACTGCCATAGAAATTTGGTACA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAAAACTGTCTGCGATTaGATATTCTACGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTKTVCD*IFYGVS
Trigger: GCTCACTCCGTAGAATATTCAATCGCAGACAGTTTT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAGGTCCTCAGAGTGGTaGAGGAAAATAGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTRSSEW*RKIGHF
Trigger: AAAATGACCTATTTTCCTTCACCACTCTGAGGACCT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCTCCTGTTGGCTTCTaGGAATATAAATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSPVGF*EYKFST
Trigger: GGTGGAAAATTTATATTCTCAGAAGCCAACAGGAGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCTCCTGTTGGCTTCTaGGAATATAAATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSPVGF*EYKFST
Trigger: GGTGGAAAATTTATATTCTCAGAAGCCAACAGGAGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCCTCACTTCCACTCTaGTACTTCCATAATTCTAGT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSSLPL*YFHNSS
Trigger: ACTAGAATTATGGAAGTATCAGAGTGGAAGTGAGGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCCTCACTTCCACTCTaGTACTTCCATAATTCTAGT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSSLPL*YFHNSS
Trigger: ACTAGAATTATGGAAGTATCAGAGTGGAAGTGAGGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCGTGACTTACATCTTTaGAATGACCTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVRDLHL*NDLISH
Trigger: ATGGGAAATGAGGTCATTTCAAAGATGTAAGTCACG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCTATCACATTCCTTTaGAACTTTAGTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSITFL*NFSPAR
Trigger: TCTGGCAGGACTAAAGTTTCAAAGGAATGTGATAGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGATGAAGGTCTCTGGTaGTACAAGTACCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHDEGLW*YKYLDK
Trigger: TTTATCTAGGTACTTGTATCACCAGAGACCTTCATC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAACCATTCCCAATATCTaGATGGTTCAACACAGACTG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTTIPNI*MVQHRL
Trigger: CAGTCTGTGTTGAACCATTCAGATATTGGGAATGGT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCATCTTAATGTAACATaGCTGTATGTGTGGACTGGA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHHLNVT*LYVWTG
Trigger: TCCAGTCCACACATACAGTCATGTTACATTAAGATG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAAAAGAAGCATTCTTTaGATGGCTTTCGTGAACGGC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTKRSIL*MAFVNG
Trigger: GCCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAGGATATAAACTATTaGAGGGCACACCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQDINY*RAHRYH
Trigger: ATGATAGCGGTGTGCCCTGCAATAGTTTATATCCTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACACTCTTCATGCAATATaGTCTTTTCTGCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHTLHAI*SFLQGS
Trigger: TGAGCCTTGCAGAAAAGAGCATATTGCATGAAGAGT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACATGTTTCCTGGGTTATaGATGAGTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHMFPGL*MSQILL
Trigger: AAGGAGGATTTGACTCATGCATAACCCAGGAAACAT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGACAAGAGCTTCACTCTaGACAAAGACTCATTACCTA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVTRASL*TKTHYL
Trigger: TAGGTAATGAGTCTTTGTGCAGAGTGAAGCTCTTGT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAGAAGCTGTCATGATTaGAAGGGTAATTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLRSCHD*KGNSSH
Trigger: GTGAGAAGAATTACCCTTCCAATCATGACAGCTTCT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGAAGCTGTCATGATTaGAAGGGTAATTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHRSCHD*KGNSSH
Trigger: GTGAGAAGAATTACCCTTCCAATCATGACAGCTTCT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTCAATACTGACTATTaGCCATTGCCTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLNTDY*PLPEIC
Trigger: ACAGATTTCAGGCAATGGCCAATAGTCAGTATTGAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTCCCACAGGAGGAGTaGAAAAACTTTGGATTCTTA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLPQEE*KNFGFL
Trigger: TAAGAATCCAAAGTTTTTCCACTCCTCCTGTGGGAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATTTCATGTGCTTGAATaGAGGAACAATAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTFHVLE*RNNSLL
Trigger: CAAGAGGCTATTGTTCCTTCATTCAAGCACATGAAA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCAAATACAGTACACATaGTCCTTTCATGTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHQIQYT*SFHVLE
Trigger: TTCAAGCACATGAAAGGATCATGTGTACTGTATTTG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGATGTGGCTGTCACATTaGGAAAATGGTTTTATCACA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVMWLSH*ENGFIT
Trigger: TGTGATAAAACCATTTTCTCAATGTGACAGCCACAT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGGATTTGAGAAAGCTTaGTTATTTCATGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTGFEKA*LFHATL
Trigger: AAGGGTGGCATGAAATAATCAAGCTTTCTCAAATCC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTTTAAGGACTCACGTTaGATATCTAGATTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHFKDSR*ISRFGR
Trigger: CCTACCAAATCTAGATATTCAACGTGAGTCCTTAAA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGAGATGACATAAAGTaGCACAGTGAAGTTGACATT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHRDDIK*HSEVDI
Trigger: AATGTCAACTTCACTGTGTCACTTTATGTCATCTCT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCACAGTTGGCCATTGTaGGTATCTTTGAAAAGATTA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHHSWPL*VSLKRL
Trigger: TAATCTTTTCAAAGATACTCACAATGGCCAACTGTG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTGATGCACTCTTCATaGAATATGCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLMHSS*NMLFSA
Trigger: TGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCTAAAGGTGGGGAGTaGATGTTTTATTTCTATCTG +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSKGGE*MFYFYL
Trigger: CAGATAGAAATAAAACATGCACTCCCCACCTTTAGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTGTCTGATAGGAGTTTaGTGGTGTAAATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVCLIGV*WCKFSI
Trigger: GATGCTAAATTTACACCAGCAAACTCCTATCAGACA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATGTCTGATAGGAGTTTaGTGGTGTAAATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLCLIGV*WCKFSI
Trigger: GATGCTAAATTTACACCAGCAAACTCCTATCAGACA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAAACAAAATACAGTCTaGAAGATTAACCACCGTCCA +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHKQNTV*KINHRP
Trigger: TGGACGGTGGTTAATCTTCCAGACTGTATTTTGTTT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCAGCTAGTCACTAAGTaGAAATCTCATTATACACTG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVQLVTK*KSHYTL
Trigger: CAGTGTATAATGAGATTTCCACTTAGTGACTAGCTG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAGAAGCTGTCATGATTaGAAGGGTAATTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTRSCHD*KGNSSH
Trigger: GTGAGAAGAATTACCCTTCCAATCATGACAGCTTCT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCAAAGACTACAGTTTaGCTAGATATACTATGGAGG +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSKTTV*LDILWR
Trigger: CCTCCATAGTATATCTAGCCAAACTGTAGTCTTTGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTGATAGGAGTTTGCTaGTGTAAATTTAGCATCACT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLIGVC*CKFSIT
Trigger: AGTGATGCTAAATTTACACCAGCAAACTCCTATCAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAAGCCTTTAAACTTTaGGTTTTGGTTGTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQAFKL*VLVVVR
Trigger: TCTTACCACAACCAAAACCCAAAGTTTAAAGGCTTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATTAAAACTGAACGATTaGCACTATCAACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLKLND*HYQHSQ
Trigger: CTGAGAGTGTTGATAGTGTCAATCGTTCAGTTTTAA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATATTGTTTTAGGCTTTaGATCTGGTCGTATTCACTC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTYCFRL*IWSYSL
Trigger: GAGTGAATACGACCAGATTCAAAGCCTAAAACAATA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR TCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTTACATCTTTGAAATaGCCTCATTTCCCATGGATA +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLTSLK*PHFPWI
Trigger: TATCCATGGGAAATGAGGTCATTTCAAAGATGTAAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAATTCAATTCTACCTaGTGTGTTACTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKFNST*CVTTSF
Trigger: GAAGGATGTAGTAACACAGCAGGTAGAATTGAATTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATCTAAAGGTGGGGAGTaGATGTTTTATTTCTATCTG +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSKGGE*MFYFYL
Trigger: CAGATAGAAATAAAACATGCACTCCCCACCTTTAGA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR GCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATGTCTGATAGGAGTTTaGTGGTGTAAATTTAGCATC +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTCLIGV*WCKFSI
Trigger: GATGCTAAATTTACACCAGCAAACTCCTATCAGACA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CCA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAACAGAGTTGAAGAGTTaGCATAAAAAGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLTELKS*HKKKHS
Trigger: AGAATGCTTCTTTTTATGCCAACTCTTCAACTCTGT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACACAGAGTTGAAGAGTTaGCATAAAAAGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHTELKS*HKKKHS
Trigger: AGAATGCTTCTTTTTATGCCAACTCTTCAACTCTGT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CCA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTGATAGGAGTTTGCTaGTGTAAATTTAGCATCACT +
Preference number: 4 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLIGVC*CKFSIT
Trigger: AGTGATGCTAAATTTACACCAGCAAACTCCTATCAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS CCA 90 bp CGGTGGAGCCTCTCCTGCTCCCTTGCAAACTCGCCAAGAGTGTACTaGCGCACGCTGTTATGGCGGCTGGACATCCCCAGGGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RWSLSCSLANSPRVY*RTLLWRLDIPRVLP
Trigger: GGGAAGCACCCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000409664.5
ENST00000421875.5
ENST00000651982.1
CDS GCA 90 bp AAGGTGTTCTCTCAACATCTCCCGGTGGAGCCTCTCCTGCTCCCTTaGAAACTCGCCAAGAGTGTACTGGCGCACGCTGTTATGGCGGCT +
Preference number: 5 (lower is better)
Translates to: KVFSQHLPVEPLLLP*KLAKSVLAHAVMAA
Trigger: AGCCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAGAGAACACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000409664.5
ENST00000421875.5
ENST00000651982.1
CDS GCA 90 bp AGAGGGGTTGGCAGCTGGGTAGTGGGAGGCACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAACGAATTGCTCCGGGGTCATGGTGTA +
Preference number: 5 (lower is better)
Translates to: RGVGSWVVGGTIGLF*LSGIVNELLRGHGV
Trigger: TACACCATGACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS GCA 90 bp TCCTCCCTAAGGTGTTCTCTCAACATCTCCCGGTGGAGCCTCTCCTaGTCCCTTGCAAACTCGCCAAGAGTGTACTGGCGCACGCTGTTA +
Preference number: 5 (lower is better)
Translates to: SSLRCSLNISRWSLS*SLANSPRVYWRTLL
Trigger: TAACAGCGTGCGCCAGTACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAGAGAACACCTTAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000409664.5
ENST00000421875.5
ENST00000651982.1
CDS GCA 90 bp AGCCCTGTGACCTTTGAACTCCCTTCTGCCCCCTCCTCTCGCTTCTaGAGTCAAAGCCTCCGAGCTGGTCTCATTTGCATAAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SPVTFELPSAPSSRF*SQSLRAGLICIRLR
Trigger: CCTGAGCCTTATGCAAATGAGACCAGCTCGGAGGCTTTGACTGCAGAAGCGAGAGGAGGGGGCAGAAGGGAGTTCAAAGGTCACAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS CCA 90 bp CTGCAAAAGCTGCTCCCATCCTCCTCTTCTTCCTCCTCCTCTCCTTaGCAATCTAATTCTTCAGCCGACTGCAGGTGCAGCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LQKLLPSSSSSSSSP*QSNSSADCRCSTAA
Trigger: GGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATTAGATTGCCAAGGAGAGGAGGAGGAAGAAGAGGAGGATGGGAGCAGCTTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 90 bp CGAGCTGGTCTCATTTGCATAAGGCTCAGGCAGTCCTCCAGCAGCTaGAACGGAATGCTGGGTAAGGAATTGTGGAACTGCGGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RAGLICIRLRQSSSS*NGMLGKELWNCGSA
Trigger: GGCAGAACCGCAGTTCCACAATTCCTTACCCAGCATTCCGTTTCAGCTGCTGGAGGACTGCCTGAGCCTTATGCAAATGAGACCAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS CCA 90 bp ATTTTCGGAAGAGGAGCAGCAAACGATTACAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATAGGCCTCTTCTGCTTGTCGGGCATA +
Preference number: 5 (lower is better)
Translates to: IFGRGAANDYRGVGS*VVGGTIGLFCLSGI
Trigger: TATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCTGTAATCGTTTGCTGCTCCTCTTCCGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS TCA 90 bp ATCCTCCTCCTCCTCTTCCTCTTCTTCTTCCTCCTCCTCCTCGTCTaGCTCACTAGGTGCCAAGCTTTGCGTGCTAGAATCTGTGACTCC +
Preference number: 5 (lower is better)
Translates to: ILLLLFLFFFLLLLV*LTRCQALRARICDS
Trigger: GGAGTCACAGATTCTAGCACGCAAAGCTTGGCACCTAGTGAGTCAGACGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 90 bp TGCATGGCTTTCGTGAACGGCGGTGCCATCAGAATAACAAAGAACTaGAGGAAGAGGGACAACTTCGGCATGGGTGCCCAAACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: CMAFVNGGAIRITKN*RKRDNFGMGAQTFH
Trigger: GTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCCTCTTCCTTCAGTTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAAGCCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 90 bp CACTGCAGCCTGGGGCTCAGTTTCAATCTCAAAACTGTCTGCGATTaGATATTCTACGGAGTGAGCGACAGGGCCCATAGAACTACTGTG +
Preference number: 5 (lower is better)
Translates to: HCSLGLSFNLKTVCD*IFYGVSDRAHRTTV
Trigger: CACAGTAGTTCTATGGGCCCTGTCGCTCACTCCGTAGAATATTCAATCGCAGACAGTTTTGAGATTGAAACTGAGCCCCAGGCTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATGGAGAAAAGGCTGGTaGCTGAGGTCGTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIWRKGW*LRSCLF
Trigger: GAAGAGACACGACCTCAGCAACCAGCCTTTTCTCCA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTGGAGAAAAGGCTGGTaGCTGAGGTCGTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRWRKGW*LRSCLF
Trigger: GAAGAGACACGACCTCAGCAACCAGCCTTTTCTCCA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS GCA 90 bp CAGAATAACAAAGAACTGAAGGAAGAGGGACAACTTCGGCATGGGTaGCCAAACCTTCCACGAAGCCATCTCCTTTGTCATCATCGTCAT +
Preference number: 5 (lower is better)
Translates to: QNNKELKEEGQLRHG*PNLPRSHLLCHHRH
Trigger: ATGACGATGATGACAAAGGAGATGGCTTCGTGGAAGGTTTGGGCACCCATGCCGAAGTTGTCCCTCTTCCTTCAGTTCTTTGTTATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS CCA 90 bp TGGCAATCTAATTCTTCAGCCGACTGCAGGTGCAGCACTGCAGCCTaGGGCTCAGTTTCAATCTCAAAACTGTCTGCGATTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: WQSNSSADCRCSTAA*GSVSISKLSAIEYS
Trigger: AGAATATTCAATCGCAGACAGTTTTGAGATTGAAACTGAGCCCCAGGCTGCAGTGCTGCACCTGCAGTCGGCTGAAGAATTAGATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGCTGTCACATGTACCTaGAGATCTCAGGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRAVTCT*RSQELQ
Trigger: CTGGAGTTCCTGAGATCTCAAGGTACATGTGACAGC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTAGAAGTGGATGGATaGACACTGTCCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLEVDG*TLSPLS
Trigger: TGACAGTGGGGACAGTGTCAATCCATCCACTTCTAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTAGAAGTGGATGGATaGACACTGTCCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLEVDG*TLSPLS
Trigger: TGACAGTGGGGACAGTGTCAATCCATCCACTTCTAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCACACTTGTGAAGCCTaGCCTCCTGGTGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRHTCEA*PPGEVV
Trigger: TACTACTTCACCAGGAGGCAAGGCTTCACAAGTGTG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAGGGTGCTTCCCCCTaGACTGGGCACACTTGTGAA +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQGASP*TGHTCE
Trigger: TTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIIQRGD*LLSVFL
Trigger: GAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAAT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRIQRGD*LLSVFL
Trigger: GAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAAT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRIQRGD*LLSVFL
Trigger: GAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAAT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGATAGGCCTCTTCTGCTaGTCGGGCATAGTCAACGAA +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRIGLFC*SGIVNE
Trigger: TTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTAT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAGAGACAAACCCTTCTaGGGAGGGGCCTTTCAAGTA +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIRDKPF*GGAFQV
Trigger: TACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTCT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGAGACAAACCCTTCTaGGGAGGGGCCTTTCAAGTA +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRRDKPF*GGAFQV
Trigger: TACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAAGTTCTGACTCTGAGTaGGGTGTCAACTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISSDSE*GVNSEQ
Trigger: CTGCTCAGAGTTGACACCCAACTCAGAGTCAGAACT...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAGTTCTGACTCTGAGTaGGGTGTCAACTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRSSDSE*GVNSEQ
Trigger: CTGCTCAGAGTTGACACCCAACTCAGAGTCAGAACT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACAAGAGCATCCGAGTTaGGGAGATATGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIQEHPS*GDMQLY
Trigger: GTACAGCTGCATATCTCCCAAACTCGGATGCTCTTG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTCATTACCTACTGCTaGCTGCACGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLITYC*LHGISL
Trigger: GAGGCTGATGCCGTGCAGCAAGCAGTAGGTAATGAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS TCA 90 bp TACGTTAGGGAGATGGCAGTCTGCAAGCTAAGTGGCTCTCCATCTTaGGATCTCAGGAACTCCAGTATTTTCCTGAAGATTCTATGCCTC +
Preference number: 5 (lower is better)
Translates to: YVREMAVCKLSGSPS*DLRNSSIFLKILCL
Trigger: GAGGCATAGAATCTTCAGGAAAATACTGGAGTTCCTGAGATCTCAAGATGGAGAGCCACTTAGCTTGCAGACTGCCATCTCCCTAACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464503.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTCTCAGAGATCTGATTaGGAGTTCCTGGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRSQRSD*EFLECG
Trigger: GCCACATTCCAGGAACTCCAAATCAGATCTCTGAGA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGGCATAGTCAACGAATaGCTCCGGGGTCATGGTGTA +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDGIVNE*LRGHGV
Trigger: TACACCATGACCCCGGAGCAATTCGTTGACTATGCC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGAAACCCAACTTCCCTaGAATCCCCTAGTACAATGG +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIETQLP*NPLVQW
Trigger: CCATTGTACTAGGGGATTCAAGGGAAGTTGGGTTTC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS TCA 90 bp TTTTCTGCAAGGCTCAAAGAATTTTCAGCAGGATGCTCTGAAATGTaGCTGTCACCATTCAATGCAGAGACAAACCCTTCTTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FSARLKEFSAGCSEM*LSPFNAETNPSWEG
Trigger: CCCCTCCCAAGAAGGGTTTGTCTCTGCATTGAATGGTGACAGTCACATTTCAGAGCATCCTGCTGAAAATTCTTTGAGCCTTGCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS GCA 90 bp TGCTTGTACCATATGCTTTATTGTTCAGCAACAAGAGCTTCACTCTaGACAAAGACTCATTACCTACTGCTTGCTGCACGGCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: CLYHMLYCSATRASL*TKTHYLLLAARHQP
Trigger: AGGCTGATGCCGTGCAGCAAGCAGTAGGTAATGAGTCTTTGTGCAGAGTGAAGCTCTTGTTGCTGAACAATAAAGCATATGGTACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTAGAAGTGGATGGATaGACACTGTCCCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLEVDG*TLSPLS
Trigger: TGACAGTGGGGACAGTGTCAATCCATCCACTTCTAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCACACTTGTGAAGCCTaGCCTCCTGGTGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFHTCEA*PPGEVV
Trigger: TACTACTTCACCAGGAGGCAAGGCTTCACAAGTGTG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAGGGTGCTTCCCCCTaGACTGGGCACACTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQGASP*TGHTCE
Trigger: TTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATATCATCTACCTCTGTGTaGTCCAGGTCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRISSTSV*SRSMSS
Trigger: TGATGACATTGACCTGGACAACACAGAGGTAGATGA...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGGCATAGTCAACGAATaGCTCCGGGGTCATGGTGTA +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSGIVNE*LRGHGV
Trigger: TACACCATGACCCCGGAGCAATTCGTTGACTATGCC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTCAGGATATAAACTATaGCAGGGCACACCGCTATCA +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRSGYKL*QGTPLS
Trigger: TGATAGCGGTGTGCCCTGCAATAGTTTATATCCTGA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGAGACAAACCCTTCTaGGGAGGGGCCTTTCAAGTA +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFRDKPF*GGAFQV
Trigger: TACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTCT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTGCAGGTCAGGTTATaGTGTCTTGGCATAAAGATC +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILQVRL*CLGIKI
Trigger: GATCTTTATGCCAAGACACAATAACCTGACCTGCAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGCTGCTTCAGCCACTaGACTTTCAAATCAATTCGG +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSCFSH*TFKSIR
Trigger: CCGAATTGATTTGAAAGTCAAGTGGCTGAAGCAGCT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTCAAGAGCATCCGAGTTaGGGAGATATGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFQEHPS*GDMQLY
Trigger: GTACAGCTGCATATCTCCCAAACTCGGATGCTCTTG...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTCAAAAGACTTCCCTaGTGTAAGGACCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILKRLP*CKDHSQ
Trigger: TTGGGAATGGTCCTTACACAAGGGAAGTCTTTTGAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGCTGTCACATGTACCTaGAGATCTCAGGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSAVTCT*RSQELQ
Trigger: CTGGAGTTCCTGAGATCTCAAGGTACATGTGACAGC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314499.11
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACAGGGTGCTTCCCCCTaGACTGGGCACACTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTQGASP*TGHTCE
Trigger: TTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCTG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSIQRGD*LLSVFL
Trigger: GAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAAT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAAAAAGAAGCATTCTTaGCATGGCTTTCGTGAACGG +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRKKKHS*HGFRER
Trigger: CCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTTT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATCTCAGAGATCTGATTaGGAGTTCCTGGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSQRSD*EFLECG
Trigger: GCCACATTCCAGGAACTCCAAATCAGATCTCTGAGA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTATAGGCCTCTTCTGCTaGTCGGGCATAGTCAACGAA +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSIGLFC*SGIVNE
Trigger: TTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTAT...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTCTGATCTACACAGATaGGCAGGTTTCACACAGTTT +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSDLHR*AGFTQF
Trigger: AAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTTTTGTAGAGATGGATaGATCACGCTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRFCRDG*ITLEKR
Trigger: CCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTTGTCATTTTCTCTTaGGGCCTGTGCTCTTTAGAT +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLVIFS*GLCSLD
Trigger: ATCTAAAGAGCACAGGCCCAAAGAGAAAATGACAAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATAGTGGGCAGCTCTTTGTaGAATAGAACGGCTATTAAT +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIVGSSL*NRTAIN
Trigger: ATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCAC...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTGGAGCATGAAGCTTaGCAATTGATAGTGAATGAC +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLEHEA*QLIVND
Trigger: GTCATTCACTATCAATTGCAAAGCTTCATGCTCCAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTTCTCCCAAAGGAAATaGGGAATGACAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRFSQRK*GMTKEM
Trigger: CATCTCCTTTGTCATTCCCAATTTCCTTTGGGAGAA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGTTTCCACCTGCTAATTaGATGGTTTGTAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRFPPAN*MVCNSS
Trigger: GCTGGAGTTACAAACCATCAAATTAGCAGGTGGAAA...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGAACAAAACAACTGCATaGTTTAGGAAGGGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRNKTTA*FRKGVS
Trigger: TGAGACCCCCTTCCTAAACAATGCAGTTGTTTTGTT...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGAAACCCAACTTCCCTaGAATCCCCTAGTACAATGG +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDETQLP*NPLVQW
Trigger: CCATTGTACTAGGGGATTCAAGGGAAGTTGGGTTTC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGTCATGTTACAGACCATaGTCTCTGAATCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSCYRP*SLNPCL
Trigger: AAGACACGGATTCAGAGACAATGGTCTGTAACATGA...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTGGAGAAAGGAAACATaGATTTCGGGGGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFWRKET*ISGVFL
Trigger: GAGGAACACCCCCGAAATCAATGTTTCCTTTCTCCA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATGGAGAAAGGAAACATaGATTTCGGGGGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTWRKET*ISGVFL
Trigger: GAGGAACACCCCCGAAATCAATGTTTCCTTTCTCCA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACCGAGCTGGTCTCATTaGCATAAGGCTCAGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLPSWSH*HKAQAV
Trigger: GACTGCCTGAGCCTTATGCAAATGAGACCAGCTCGG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTCTCAGAGATCTGATTaGGAGTTCCTGGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSQRSD*EFLECG
Trigger: GCCACATTCCAGGAACTCCAAATCAGATCTCTGAGA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGGCATAGTCAACGAATaGCTCCGGGGTCATGGTGTA +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHGIVNE*LRGHGV
Trigger: TACACCATGACCCCGGAGCAATTCGTTGACTATGCC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACATCAACCACGGGTGATTaGATGCACTCTTCATGCAAT +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSTTGD*MHSSCN
Trigger: ATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGA...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTACAGAGACTGTATTaGTGCAATGCCACAGTCATG +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLQRLY*CNATVM
Trigger: CATGACTGTGGCATTGCACAAATACAGTCTCTGTAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTATGCATCTTCAGCTaGAATGAACATGCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLCIFS*NEHAAV
Trigger: AACAGCCGCATGTTCATTCAAGCTGAAGATGCATAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCATGTGGGCAGCTCTTaGTTGAATAGAACGGCTATT +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDHVGSS*LNRTAI
Trigger: AATAGCCGTTCTATTCAACAAAGAGCTGCCCACATG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTGCAGGTCAGGTTATaGTGTCTTGGCATAAAGATC +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLQVRL*CLGIKI
Trigger: GATCTTTATGCCAAGACACAATAACCTGACCTGCAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACATGTGGCTGTCACATaGAGAAAATGGTTTTATCAC +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRIHVAVT*RKWFYH
Trigger: GTGATAAAACCATTTTCTCAATGTGACAGCCACATG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTTATTAAGCTTTTATaGCGTCCTCACTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILIKLL*RPHFHS
Trigger: AGAGTGGAAGTGAGGACGCAATAAAAGCTTAATAAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTTATTAAGCTTTTATaGCGTCCTCACTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLIKLL*RPHFHS
Trigger: AGAGTGGAAGTGAGGACGCAATAAAAGCTTAATAAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGAGTATTCACACACAGTaGGCCATTGTGAGTATCTTT +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRSIHTQ*AIVSIF
Trigger: AAAGATACTCACAATGGCCAACTGTGTGTGAATACT...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTGGAGAAAGGAAACATaGATTTCGGGGGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSWRKET*ISGVFL
Trigger: GAGGAACACCCCCGAAATCAATGTTTCCTTTCTCCA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACACACTTGTGAAGCCTaGCCTCCTGGTGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLHTCEA*PPGEVV
Trigger: TACTACTTCACCAGGAGGCAAGGCTTCACAAGTGTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTCATCTACCTCTGTGTaGTCCAGGTCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSSSTSV*SRSMSS
Trigger: TGATGACATTGACCTGGACAACACAGAGGTAGATGA...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGGTTCAAGTTTCATTATaGTGTGCAAAAAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRVQVSL*CAKSES
Trigger: GGACTCACTTTTTGCACACAATAATGAAACTTGAAC...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAAAAAGAAGCATTCTTaGCATGGCTTTCGTGAACGG +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTKKKHS*HGFRER
Trigger: CCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTTT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAATAGGCCTCTTCTGCTaGTCGGGCATAGTCAACGAA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLIGLFC*SGIVNE
Trigger: TTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTAT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAAGAGACAAACCCTTCTaGGGAGGGGCCTTTCAAGTA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLRDKPF*GGAFQV
Trigger: TACTTGAAAGGCCCCTCCCAAGAAGGGTTTGTCTCT...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTACAGAGACTGTATTaGTGCAATGCCACAGTCATG +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLQRLY*CNATVM
Trigger: CATGACTGTGGCATTGCACAAATACAGTCTCTGTAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTCTGATCTACACAGATaGGCAGGTTTCACACAGTTT +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDSDLHR*AGFTQF
Trigger: AAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTTTTTGTAGAGATGGATaGATCACGCTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFFCRDG*ITLEKR
Trigger: CCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAA...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GACTACAGTTTGGCTAGATATACTATGGAGGCAATACAACAGCTGCAGGTCAGGCTAAAAACTGTCACTTaGCAGACAACATGGGATATA +
Preference number: 5 (lower is better)
Translates to: DYSLARYTMEAIQQLQVRLKTVT*QTTWDI
Trigger: TATATCCCATGTTGTCTGCAAAGTGACAGTTTTTAG...CCTGACCTGCAGCTGTTGTATTGCCTCCATAGTATATCTAGCCAAACTGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTGACTATTGGCCATaGCCTGAAATCTGTCATTCT +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDTDYWP*PEICHS
Trigger: AGAATGACAGATTTCAGGCAATGGCCAATAGTCAGT...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAACTGACTATTGGCCATaGCCTGAAATCTGTCATTCT +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTTDYWP*PEICHS
Trigger: AGAATGACAGATTTCAGGCAATGGCCAATAGTCAGT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTGCAGGTCAGGTTATaGTGTCTTGGCATAAAGATC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLQVRL*CLGIKI
Trigger: GATCTTTATGCCAAGACACAATAACCTGACCTGCAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACTTCTCCCAAAGGAAATaGGGAATGACAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDFSQRK*GMTKEM
Trigger: CATCTCCTTTGTCATTCCCAATTTCCTTTGGGAGAA...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGGTAGGCTAGTACAGCCATATTaGTCAAAAGTTGGTCATGTT +
Preference number: 5 (lower is better)
Translates to: FGALIYTDWQVSHSLTGRLVQPY*SKVGHV
Trigger: AACATGACCAACTTTTGACAAATATGGCTGTACTAG...CCTACCTGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CGTATTCACTCTCCTGGTTCCCATCATTCTACTGGCATTACCACTCTCAGGATACTTCGTTTTCAGGCCTaGTCAAGAAGACAAATTTTT +
Preference number: 5 (lower is better)
Translates to: RIHSPGSHHSTGITTLRILRFQA*SRRQIF
Trigger: AAAAATTTGTCTTCTTGACAAGGCCTGAAAACGAAG...TATCCTGAGAGTGGTAATGCCAGTAGAATGATGGGAACCAGGAGAGTGAATACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTTCTGACTCTGAGTaGGGTGTCAACTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSSDSE*GVNSEQ
Trigger: CTGCTCAGAGTTGACACCCAACTCAGAGTCAGAACT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAAGAGCATCCGAGTTaGGGAGATATGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQEHPS*GDMQLY
Trigger: GTACAGCTGCATATCTCCCAAACTCGGATGCTCTTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCAAAACTGTCTGCGATaGAATATTCTACGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSQNCLR*NILRSE
Trigger: CTCACTCCGTAGAATATTCAATCGCAGACAGTTTTG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGAAAGGGTACCATTTTaGACAGTGTCTCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTERVPF*TVSLSE
Trigger: TTCTGAAAGAGACACTGTCAAAAATGGTACCCTTTC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGAAAGGGTACCATTTTaGACAGTGTCTCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDERVPF*TVSLSE
Trigger: TTCTGAAAGAGACACTGTCAAAAATGGTACCCTTTC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGTGGGCAGCTCTTTGTaGAATAGAACGGCTATTAAT +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSVGSSL*NRTAIN
Trigger: ATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCAC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAGTCAAAGACTACAGTTaGGCTAGATATACTATGGAG +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTVKDYS*ARYTME
Trigger: CTCCATAGTATATCTAGCCAAACTGTAGTCTTTGAC...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTCTGGAGCATGAAGCTTaGCAATTGATAGTGAATGAC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSLEHEA*QLIVND
Trigger: GTCATTCACTATCAATTGCAAAGCTTCATGCTCCAG...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACGGCAGTGGGCTTTATTaGTTTGAGACACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDGSGLY*FETQMK
Trigger: TTTCATTTGTGTCTCAAACAAATAAAGCCCACTGCC...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGTATTCACACACAGTaGGCCATTGTGAGTATCTTT +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSIHTQ*AIVSIF
Trigger: AAAGATACTCACAATGGCCAACTGTGTGTGAATACT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGAAACCCAACTTCCCTaGAATCCCCTAGTACAATGG +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHETQLP*NPLVQW
Trigger: CCATTGTACTAGGGGATTCAAGGGAAGTTGGGTTTC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS GCA 90 bp CTGGTTCAGAGGAATCTTCTTAAATTTCCCAGCCCTGTGTTTTATTaGTTGTACCATATGCTTTATTGTTCAGCAACAAGAGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: LVQRNLLKFPSPVFY*LYHMLYCSATRASL
Trigger: GAGTGAAGCTCTTGTTGCTGAACAATAAAGCATATGGTACAAGCAATAAAACACAGGGCTGGGAAATTTAAGAAGATTCCTCTGAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCATCTACCTCTGTGTaGTCCAGGTCAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSSTSV*SRSMSS
Trigger: TGATGACATTGACCTGGACAACACAGAGGTAGATGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATCTCAGAGATCTGATTaGGAGTTCCTGGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSQRSD*EFLECG
Trigger: GCCACATTCCAGGAACTCCAAATCAGATCTCTGAGA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGAAAGGGTACCATTTTaGACAGTGTCTCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSERVPF*TVSLSE
Trigger: TTCTGAAAGAGACACTGTCAAAAATGGTACCCTTTC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATCAGGATATAAACTATaGCAGGGCACACCGCTATCA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLSGYKL*QGTPLS
Trigger: TGATAGCGGTGTGCCCTGCAATAGTTTATATCCTGA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCAGGATATAAACTATaGCAGGGCACACCGCTATCA +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSGYKL*QGTPLS
Trigger: TGATAGCGGTGTGCCCTGCAATAGTTTATATCCTGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACTCAGGATATAAACTATaGCAGGGCACACCGCTATCA +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHSGYKL*QGTPLS
Trigger: TGATAGCGGTGTGCCCTGCAATAGTTTATATCCTGA...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATCAACCACGGGTGATTaGATGCACTCTTCATGCAAT +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLSTTGD*MHSSCN
Trigger: ATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCAACCACGGGTGATTaGATGCACTCTTCATGCAAT +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSTTGD*MHSSCN
Trigger: ATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTACAGAGACTGTATTaGTGCAATGCCACAGTCATG +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLQRLY*CNATVM
Trigger: CATGACTGTGGCATTGCACAAATACAGTCTCTGTAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTATGCATCTTCAGCTaGAATGAACATGCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLCIFS*NEHAAV
Trigger: AACAGCCGCATGTTCATTCAAGCTGAAGATGCATAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTATGCATCTTCAGCTaGAATGAACATGCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLCIFS*NEHAAV
Trigger: AACAGCCGCATGTTCATTCAAGCTGAAGATGCATAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp TCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACCTAAAAACTGTCACTTaGCAGACAACATGGGATATA +
Preference number: 5 (lower is better)
Translates to: SKIWSSDLHRLAGFTQFDLKTVT*QTTWDI
Trigger: TATATCCCATGTTGTCTGCAAAGTGACAGTTTTTAG...GTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCATGTGGGCAGCTCTTaGTTGAATAGAACGGCTATT +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVHVGSS*LNRTAI
Trigger: AATAGCCGTTCTATTCAACAAAGAGCTGCCCACATG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACACTTCGTTTTCAGGCCTaGTCAAGAAGACAAATTTTT +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTLRFQA*SRRQIF
Trigger: AAAAATTTGTCTTCTTGACAAGGCCTGAAAACGAAG...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GGAGGGAAGGAATTCAGGGAGTATTGCAGGGCCATATATGATTGTGAAGATTTTAGTCCTTTGGATCATTaGATCTACCAATACATTCAG +
Preference number: 5 (lower is better)
Translates to: GGKEFREYCRAIYDCEDFSPLDH*IYQYIQ
Trigger: CTGAATGTATTGGTAGATCAAATGATCCAAAGGACT...AAAATCTTCACAATCATATATGGCCCTGCAATACTCCCTGAATTCCTTCCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp CCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTTTGACAAGTCCTTTGGATCATTaGATCTACCAATACATTCAG +
Preference number: 5 (lower is better)
Translates to: PKFGALIYTDWQVSHSLTSPLDH*IYQYIQ
Trigger: CTGAATGTATTGGTAGATCAAATGATCCAAAGGACT...TGTCAAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTCAAAAGACTTCCCTaGTGTAAGGACCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLKRLP*CKDHSQ
Trigger: TTGGGAATGGTCCTTACACAAGGGAAGTCTTTTGAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTCAAAAGACTTCCCTaGTGTAAGGACCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLKRLP*CKDHSQ
Trigger: TTGGGAATGGTCCTTACACAAGGGAAGTCTTTTGAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp GATAATCCAAAATTTGGAGCTCTGATCTACACAGATTGGCAGGTTTCACACAGTGTTCAAGTTTCATTATaGTGTGCAAAAAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: DNPKFGALIYTDWQVSHSVQVSL*CAKSES
Trigger: GGACTCACTTTTTGCACACAATAATGAAACTTGAAC...ACTGTGTGAAACCTGCCAATCTGTGTAGATCAGAGCTCCAAATTTTGGATTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACAAAACTGTCTGCGATaGAATATTCTACGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLQNCLR*NILRSE
Trigger: CTCACTCCGTAGAATATTCAATCGCAGACAGTTTTG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCAAAACTGTCTGCGATaGAATATTCTACGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHQNCLR*NILRSE
Trigger: CTCACTCCGTAGAATATTCAATCGCAGACAGTTTTG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAAAAAGAAGCATTCTTaGCATGGCTTTCGTGAACGG +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVKKKHS*HGFRER
Trigger: CCGTTCACGAAAGCCATGCAAAGAATGCTTCTTTTT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTATTTTGTAGAGATGGATaGATCACGCTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLFCRDG*ITLEKR
Trigger: CCTTTTCTCCAGCGTGATCAATCCATCTCTACAAAA...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCTTGTCATTTTCTCTTaGGGCCTGTGCTCTTTAGAT +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVLVIFS*GLCSLD
Trigger: ATCTAAAGAGCACAGGCCCAAAGAGAAAATGACAAG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGTGGGCAGCTCTTTGTaGAATAGAACGGCTATTAAT +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLVGSSL*NRTAIN
Trigger: ATTAATAGCCGTTCTATTCAACAAAGAGCTGCCCAC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTGGAGCATGAAGCTTaGCAATTGATAGTGAATGAC +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLEHEA*QLIVND
Trigger: GTCATTCACTATCAATTGCAAAGCTTCATGCTCCAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTCTCCCAAAGGAAATaGGGAATGACAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVFSQRK*GMTKEM
Trigger: CATCTCCTTTGTCATTCCCAATTTCCTTTGGGAGAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTTTCCACCTGCTAATTaGATGGTTTGTAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVFPPAN*MVCNSS
Trigger: GCTGGAGTTACAAACCATCAAATTAGCAGGTGGAAA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGTCATGTTACAGACCATaGTCTCTGAATCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSCYRP*SLNPCL
Trigger: AAGACACGGATTCAGAGACAATGGTCTGTAACATGA...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATCTGATCTACACAGATaGGCAGGTTTCACACAGTTT +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSDLHR*AGFTQF
Trigger: AAACTGTGTGAAACCTGCCAATCTGTGTAGATCAGA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACACTTGTCATTTTCTCTTaGGGCCTGTGCTCTTTAGAT +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTLVIFS*GLCSLD
Trigger: ATCTAAAGAGCACAGGCCCAAAGAGAAAATGACAAG...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAACTGACTATTGGCCATaGCCTGAAATCTGTCATTCT +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTTDYWP*PEICHS
Trigger: AGAATGACAGATTTCAGGCAATGGCCAATAGTCAGT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGTCAAAGACTACAGTTaGGCTAGATATACTATGGAG +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLVKDYS*ARYTME
Trigger: CTCCATAGTATATCTAGCCAAACTGTAGTCTTTGAC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGCATGTGGCTGTCACATaGAGAAAATGGTTTTATCAC +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVHVAVT*RKWFYH
Trigger: GTGATAAAACCATTTTCTCAATGTGACAGCCACATG...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAATTACAGACAAGTCTaGCCTTTGAAAGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHNYRQV*PLKAQR
Trigger: CCTTTGTGCTTTCAAAGGCAAGACTTGTCTGTAATT...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACCTTATTAAGCTTTTATaGCGTCCTCACTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHLIKLL*RPHFHS
Trigger: AGAGTGGAAGTGAGGACGCAATAAAAGCTTAATAAG...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAACAAAACAACTGCATaGTTTAGGAAGGGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTNKTTA*FRKGVS
Trigger: TGAGACCCCCTTCCTAAACAATGCAGTTGTTTTGTT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTAGGCAGTGGGCTTTATTaGTTTGAGACACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLGSGLY*FETQMK
Trigger: TTTCATTTGTGTCTCAAACAAATAAAGCCCACTGCC...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACATCATGTTACAGACCATaGTCTCTGAATCCGTGTCTT +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTSCYRP*SLNPCL
Trigger: AAGACACGGATTCAGAGACAATGGTCTGTAACATGA...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AACAGTCTGAAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACGTTCAAGTTTCATTATaGTGTGCAAAAAGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: NSLKSFKIPTETVFVQCHVQVSL*CAKSES
Trigger: GGACTCACTTTTTGCACACAATAATGAAACTTGAAC...GTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTTCAGACTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTAAAAACTGTCACTTaGCAGACAACATGGGATATA +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLKTVT*QTTWDI
Trigger: TATATCCCATGTTGTCTGCAAAGTGACAGTTTTTAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAGTCAAAGACTACAGTTaGGCTAGATATACTATGGAG +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTVKDYS*ARYTME
Trigger: CTCCATAGTATATCTAGCCAAACTGTAGTCTTTGAC...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAACTGTCACTTTGCAGACAACATGGGATATATATATATACACACACACACACAAATTACAGACAAGTCTaGCCTTTGAAAGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: KLSLCRQHGIYIYTHTHTNYRQV*PLKAQR
Trigger: CCTTTGTGCTTTCAAAGGCAAGACTTGTCTGTAATT...TGTGTGTGTGTGTGTATATATATATATCCCATGTTGTCTGCAAAGTGACAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTAGTACAGCCATATTaGTCAAAAGTTGGTCATGTT +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLVQPY*SKVGHV
Trigger: AACATGACCAACTTTTGACAAATATGGCTGTACTAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAAATACAGTCTGGAAGATTAACCACCGTCCAAGTTTTCTTGGTCTTCAGTTTACTTCGTTTTCAGGCCTaGTCAAGAAGACAAATTTTT +
Preference number: 5 (lower is better)
Translates to: KIQSGRLTTVQVFLVFSLLRFQA*SRRQIF
Trigger: AAAAATTTGTCTTCTTGACAAGGCCTGAAAACGAAG...TAAACTGAAGACCAAGAAAACTTGGACGGTGGTTAATCTTCCAGACTGTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS-3UTR CAA 90 bp AAATCTTTTAAAATCCCTACAGAGACTGTATTTGTGCAATGCCACAGTCATGTGAGTCCTTTGGATCATTaGATCTACCAATACATTCAG +
Preference number: 5 (lower is better)
Translates to: KSFKIPTETVFVQCHSHVSPLDH*IYQYIQ
Trigger: CTGAATGTATTGGTAGATCAAATGATCCAAAGGACT...CACATGACTGTGGCATTGCACAAATACAGTCTCTGTAGGGATTTTAAAAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000651982.1
CDS CCA 72 bp CGCCAAGAGTGTACTGGCGCACGCTGTTATGGCGGCTaGACATCCCCAGGGTGCTTCCCCCTTGACTGGGCA +
Preference number: 6 (lower is better)
Translates to: RQECTGARCYGG*TSPGCFPLDWA
Trigger: TGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCAGTACACTCTTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000409664.5
ENST00000421875.5
ENST00000651982.1
CDS GCA 72 bp GGCAGCTGGGTAGTGGGAGGCACCATAGGCCTCTTCTaGTTGTCGGGCATAGTCAACGAATTGCTCCGGGGT +
Preference number: 6 (lower is better)
Translates to: GSWVVGGTIGLF*LSGIVNELLRG
Trigger: ACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 90 bp GGGGTTGGCAGCTGGGTAGTGGGAGGCACCATAGGCCTCTTCTGCTaGTCGGGCATAGTCAACGAATTGCTCCGGGGTCATGGTGTAAGG +
Preference number: 6 (lower is better)
Translates to: GVGSWVVGGTIGLFC*SGIVNELLRGHGVR
Trigger: CCTTACACCATGACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCTGCCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS GCA 72 bp TCTCAACATCTCCCGGTGGAGCCTCTCCTGCTCCCTTaGAAACTCGCCAAGAGTGTACTGGCGCACGCTGTT +
Preference number: 6 (lower is better)
Translates to: SQHLPVEPLLLP*KLAKSVLAHAV
Trigger: AACAGCGTGCGCCAGTACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000409664.5
ENST00000421875.5
ENST00000651982.1
CDS CCA 72 bp GGCTCAGGCAGTCCTCCAGCAGCTGAAACGGAATGCTaGGTAAGGAATTGTGGAACTGCGGTTCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GSGSPPAAETEC*VRNCGTAVLPG
Trigger: GCCTGGCAGAACCGCAGTTCCACAATTCCTTACCCAGCATTCCGTTTCAGCTGCTGGAGGACTGCCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS CCA 72 bp CCCCTCCTCTCGCTTCTGCAGTCAAAGCCTCCGAGCTaGTCTCATTTGCATAAGGCTCAGGCAGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: PLLSLLQSKPPS*SHLHKAQAVLQ
Trigger: CTGGAGGACTGCCTGAGCCTTATGCAAATGAGACCAGCTCGGAGGCTTTGACTGCAGAAGCGAGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS CCA 72 bp GGCAGTCACAGCCACAGTCCTCTCGTGAGAGGCGGATaGCTCGGAGTTCGTGCTTTTCTTCCACGTCAATCT +
Preference number: 6 (lower is better)
Translates to: GSHSHSPLVRGG*LGVRAFLPRQS
Trigger: AGATTGACGTGGAAGAAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGCTGTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS CCA 72 bp AGAGGAGCAGCAAACGATTACAGAGGGGTTGGCAGCTaGGTAGTGGGAGGCACCATAGGCCTCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RGAANDYRGVGS*VVGGTIGLFCL
Trigger: CAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCTGCCAACCCCTCTGTAATCGTTTGCTGCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 72 bp AGCTGGGTAGTGGGAGGCACCATAGGCCTCTTCTGCTaGTCGGGCATAGTCAACGAATTGCTCCGGGGTCAT +
Preference number: 6 (lower is better)
Translates to: SWVVGGTIGLFC*SGIVNELLRGH
Trigger: ATGACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCCCACTACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 90 bp GGAGGCACCATAGGCCTCTTCTGCTTGTCGGGCATAGTCAACGAATaGCTCCGGGGTCATGGTGTAAGGCACCAGCGAAAGGGTACCATT +
Preference number: 6 (lower is better)
Translates to: GGTIGLFCLSGIVNE*LRGHGVRHQRKGTI
Trigger: AATGGTACCCTTTCGCTGGTGCCTTACACCATGACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTATGGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CCA 72 bp CTGCTCCCATCCTCCTCTTCTTCCTCCTCCTCTCCTTaGCAATCTAATTCTTCAGCCGACTGCAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LLPSSSSSSSSP*QSNSSADCRCS
Trigger: GCTGCACCTGCAGTCGGCTGAAGAATTAGATTGCCAAGGAGAGGAGGAGGAAGAAGAGGAGGATGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS GCA 72 bp TCCTCCTCCTCGTCTGACTCACTAGGTGCCAAGCTTTaGGTGCTAGAATCTGTGACTCCGCTGCAAAAGCTG +
Preference number: 6 (lower is better)
Translates to: SSSSSDSLGAKL*VLESVTPLQKL
Trigger: CAGCTTTTGCAGCGGAGTCACAGATTCTAGCACGCAAAGCTTGGCACCTAGTGAGTCAGACGAGGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS GCA 72 bp ACCTTTGAACTCCCTTCTGCCCCCTCCTCTCGCTTCTaGAGTCAAAGCCTCCGAGCTGGTCTCATTTGCATA +
Preference number: 6 (lower is better)
Translates to: TFELPSAPSSRF*SQSLRAGLICI
Trigger: TATGCAAATGAGACCAGCTCGGAGGCTTTGACTGCAGAAGCGAGAGGAGGGGGCAGAAGGGAGTTCAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS CAA 72 bp ATAGGCCTCTTCTGCTTGTCGGGCATAGTCAACGAATaGCTCCGGGGTCATGGTGTAAGGCACCAGCGAAAG +
Preference number: 6 (lower is better)
Translates to: IGLFCLSGIVNE*LRGHGVRHQRK
Trigger: CTTTCGCTGGTGCCTTACACCATGACCCCGGAGCAATTCGTTGACTATGCCCGACAAGCAGAAGAGGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 72 bp TCGCTTCTGCAGTCAAAGCCTCCGAGCTGGTCTCATTaGCATAAGGCTCAGGCAGTCCTCCAGCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: SLLQSKPPSWSH*HKAQAVLQQLK
Trigger: TTTCAGCTGCTGGAGGACTGCCTGAGCCTTATGCAAATGAGACCAGCTCGGAGGCTTTGACTGCAGAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409420.1
CDS TCA 72 bp CTCCTCTTCCTCTTCTTCTTCCTCCTCCTCCTCGTCTaGCTCACTAGGTGCCAAGCTTTGCGTGCTAGAATC +
Preference number: 6 (lower is better)
Translates to: LLFLFFFLLLLV*LTRCQALRARI
Trigger: GATTCTAGCACGCAAAGCTTGGCACCTAGTGAGTCAGACGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 72 bp TTCGTGAACGGCGGTGCCATCAGAATAACAAAGAACTaGAGGAAGAGGGACAACTTCGGCATGGGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: FVNGGAIRITKN*RKRDNFGMGAQ
Trigger: TTGGGCACCCATGCCGAAGTTGTCCCTCTTCCTTCAGTTCTTTGTTATTCTGATGGCACCGCCGTTCACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 72 bp CTGGGGCTCAGTTTCAATCTCAAAACTGTCTGCGATTaGATATTCTACGGAGTGAGCGACAGGGCCCATAGA +
Preference number: 6 (lower is better)
Translates to: LGLSFNLKTVCD*IFYGVSDRAHR
Trigger: TCTATGGGCCCTGTCGCTCACTCCGTAGAATATTCAATCGCAGACAGTTTTGAGATTGAAACTGAGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS CAA 90 bp ACTGTGAGCACTTATCTCACTGTGGCAGCCATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTCCAGTTCAAGTTTCATTATTGTGTG +
Preference number: 6 (lower is better)
Translates to: TVSTYLTVAAIQRGD*LLSVFLQFKFHYCV
Trigger: CACACAATAATGAAACTTGAACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCCACAGTGAGATAAGTGCTCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS GCA 72 bp CTTATCTCACTGTGGCAGCCATTCAGCGTGGGGATTTaGTGCTCTCGGTTTTTCTCCAGTTCAAGTTTCATT +
Preference number: 6 (lower is better)
Translates to: LISLWQPFSVGI*CSRFFSSSSFI
Trigger: AATGAAACTTGAACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCCACAGTGAGATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS CAA 72 bp ACTTATCTCACTGTGGCAGCCATTCAGCGTGGGGATTaGCTGCTCTCGGTTTTTCTCCAGTTCAAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: TYLTVAAIQRGD*LLSVFLQFKFH
Trigger: ATGAAACTTGAACTGGAGAAAAACCGAGAGCAGCAAATCCCCACGCTGAATGGCTGCCACAGTGAGATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS CAA 72 bp GGAGATGGCAGTCTGCAAGCTAAGTGGCTCTCCATCTaGAGATCTCAGGAACTCCAGTATTTTCCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: GDGSLQAKWLSI*RSQELQYFPED
Trigger: ATCTTCAGGAAAATACTGGAGTTCCTGAGATCTCAAGATGGAGAGCCACTTAGCTTGCAGACTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464503.1
CDS GCA 72 bp AAGAAGCATTCTTTGCATGGCTTTCGTGAACGGCGGTaGCATCAGAATAACAAAGAACTGAAGGAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: KKHSLHGFRERR*HQNNKELKEEG
Trigger: TCCCTCTTCCTTCAGTTCTTTGTTATTCTGATGGCACCGCCGTTCACGAAAGCCATGCAAAGAATGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000421875.5
ENST00000651982.1
CDS TCA 72 bp GCTACTAAACAGGGACTGTCTCAACCACGGGTGATTTaGTGCACTCTTCATGCAATATGCTCTTTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: ATKQGLSQPRVI*CTLHAICSFLQ
Trigger: TTGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGAGACAGTCCCTGTTTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS TCA 72 bp AGGCTCAAAGAATTTTCAGCAGGATGCTCTGAAATGTaGCTGTCACCATTCAATGCAGAGACAAACCCTTCT +
Preference number: 6 (lower is better)
Translates to: RLKEFSAGCSEM*LSPFNAETNPS
Trigger: AGAAGGGTTTGTCTCTGCATTGAATGGTGACAGTCACATTTCAGAGCATCCTGCTGAAAATTCTTTGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS TCA 72 bp TTTAAGCTACTAAACAGGGACTGTCTCAACCACGGGTaGTTTGATGCACTCTTCATGCAATATGCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: FKLLNRDCLNHG*FDALFMQYALF
Trigger: GAAAAGAGCATATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGAGACAGTCCCTGTTTAGTAGCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS GCA 72 bp ACTGTCTCAACCACGGGTGATTTGATGCACTCTTCATaGAATATGCTCTTTTCTGCAAGGCTCAAAGAATTT +
Preference number: 6 (lower is better)
Translates to: TVSTTGDLMHSS*NMLFSARLKEF
Trigger: AAATTCTTTGAGCCTTGCAGAAAAGAGCATATTGCATGAAGAGTGCATCAAATCACCCGTGGTTGAGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CCA 72 bp CTTTCAAGTATGAGTGAAATTCCACTTGAGGGTGATTaGACCTGTGTTCAGGATATAAACTATTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LSSMSEIPLEGD*TCVQDINYCRA
Trigger: TGCCCTGCAATAGTTTATATCCTGAACACAGGTCCAATCACCCTCAAGTGGAATTTCACTCATACTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 90 bp GTTCAGAGGAATCTTCTTAAATTTCCCAGCCCTGTGTTTTATTGCTaGTACCATATGCTTTATTGTTCAGCAACAAGAGCTTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: VQRNLLKFPSPVFYC*YHMLYCSATRASLC
Trigger: GCAGAGTGAAGCTCTTGTTGCTGAACAATAAAGCATATGGTACAAGCAATAAAACACAGGGCTGGGAAATTTAAGAAGATTCCTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342316.8
CDS CAA 72 bp CAGTGTCTCTTTCAGAATAGTTCTCAGAGATCTGATTaGGAGTTCCTGGAATGTGGCTATCTATTTGGTAAT +
Preference number: 6 (lower is better)
Translates to: QCLFQNSSQRSD*EFLECGYLFGN
Trigger: ATTACCAAATAGATAGCCACATTCCAGGAACTCCAAATCAGATCTCTGAGAACTATTCTGAAAGAGACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314499.11
ENST00000342316.8
ENST00000409420.1
ENST00000651982.1
CDS CAA 72 bp AATCTTCTTAAATTTCCCAGCCCTGTGTTTTATTGCTaGTACCATATGCTTTATTGTTCAGCAACAAGAGCT +
Preference number: 6 (lower is better)
Translates to: NLLKFPSPVFYC*YHMLYCSATRA
Trigger: AGCTCTTGTTGCTGAACAATAAAGCATATGGTACAAGCAATAAAACACAGGGCTGGGAAATTTAAGAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342316.8