RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSNK1G1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169118

Ensembl transcript IDs: ENST00000303052.13, ENST00000561349.6, ENST00000606225.1, ENST00000606793.3, ENST00000607537.6, ENST00000634302.1, ENST00000634654.1, ENST00000634722.1, ENST00000634811.1, ENST00000634909.1, ENST00000635142.1, ENST00000635230.1, ENST00000635270.1, ENST00000635324.1, ENST00000635359.1, ENST00000635414.1, ENST00000635514.1, ENST00000635529.1

Found 1020 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACC +
Preference number: 1 (lower is better)
Translates to: STRQPYGQAVEEQQL*DLLRALGRRRWPMT
Trigger: GGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR CCA 90 bp CCCCATGGCGGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAATTTCCCACTCTCCTCGGCGCTCTG +
Preference number: 1 (lower is better)
Translates to: PHGGLQPSETLGMRY*SAGWAEFPTLLGAL
Trigger: CAGAGCGCCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACCGCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR CCA 90 bp CCCAGAAATGAGGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTaGAGCTGTGGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCTG +
Preference number: 1 (lower is better)
Translates to: PRNEEGQTSPALSSM*SCGHPVARRSVQSL
Trigger: CAGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR TCA 90 bp AGAGTAAAGGTCCCAGAAATGAGGAGGGGCAGACGTCTCCTGCACTaGGCTCTATGTGGAGCTGTGGCCATCCTGTGGCCAGGAGGAGTG +
Preference number: 1 (lower is better)
Translates to: RVKVPEMRRGRRLLH*ALCGAVAILWPGGV
Trigger: CACTCCTCCTGGCCACAGGATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATTTCTGGGACCTTTACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR GCA 90 bp GCTGTGGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTaGTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCACGCAG +
Preference number: 1 (lower is better)
Translates to: AVAILWPGGVCNLCL*SYWMAGSMLGNCTQ
Trigger: CTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR CCA 90 bp TGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: WISTLPQRGVPSNEK*QELQVQLSQSPQGL
Trigger: CAGGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR CCA 90 bp ATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGG +
Preference number: 1 (lower is better)
Translates to: ILWPGGVCNLCLCSY*MAGSMLGNCTQVTR
Trigger: CCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR CCA 90 bp CTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTCCTCGGCGCTCTGATGATACATTCT +
Preference number: 1 (lower is better)
Translates to: LQPSETLGMRYWSAG*AEFPTLLGALMIHS
Trigger: AGAATGTATCATCAGAGCGCCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR TCA 90 bp TTTGGTGCAAGGGCTGGCCTGGGATTTGGTCTGGAGCTCATGAACTaGAAATGTCTCACCTGTACTGAAAGAGGGGTGGGTGGGGACATT +
Preference number: 1 (lower is better)
Translates to: FGARAGLGFGLELMN*KCLTCTERGVGGDI
Trigger: AATGTCCCCACCCACCCCTCTTTCAGTACAGGTGAGACATTTTCAGTTCATGAGCTCCAGACCAAATCCCAGGCCAGCCCTTGCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 90 bp CACACCCTCCAGTACAAAAGACAGCCCTGCACCTCAAACCAGAGGTaGAGACTTCTATGGTCCACAAACCATCAGACTAAGTCACCCACC +
Preference number: 1 (lower is better)
Translates to: HTLQYKRQPCTSNQR*RLLWSTNHQTKSPT
Trigger: GGTGGGTGACTTAGTCTGATGGTTTGTGGACCATAGAAGTCTTCACCTCTGGTTTGAGGTGCAGGGCTGTCTTTTGTACTGGAGGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 90 bp TGCGGCCCCATATACTGCATCCTAAGCCTACTGCTATGGACCTGCTaGGAGAAGATCTTCATAAGCTTGGTTTCTGATAAGGCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: CGPIYCILSLLLWTC*EKIFISLVSDKAGQ
Trigger: CTGGCCTGCCTTATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 90 bp GGTGGGTGGGGACATTCAGAACAGCTGTCCTCTTGTGGGTGTTACTaGAATGGCTGCACCACACCCCCACTTATTACCATGAATAATCCT +
Preference number: 1 (lower is better)
Translates to: GGWGHSEQLSSCGCY*NGCTTPPLITMNNP
Trigger: AGGATTATTCATGGTAATAAGTGGGGGTGTGGTGCAGCCATTCCAGTAACACCCACAAGAGGACAGCTGTTCTGAATGTCCCCACCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CCA 90 bp GTTAGGGCAACTCAATGGGAATGGAGAGCTGGTTTAAATGTGAAATaGAAGAGGTGGCTGGAACACAGGAGGCATGTGGGCTTGGGAGAT +
Preference number: 1 (lower is better)
Translates to: VRATQWEWRAGLNVK*KRWLEHRRHVGLGD
Trigger: ATCTCCCAAGCCCACATGCCTCCTGTGTTCCAGCCACCTCTTCCATTTCACATTTAAACCAGCTCTCCATTCCCATTGAGTTGCCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 90 bp GGCTGCACCACACCCCCACTTATTACCATGAATAATCCTCTGCTCTaGGACCTTATAGATGGTGATGGCACTGGGAAAGTGATTGTGAGG +
Preference number: 1 (lower is better)
Translates to: GCTTPPLITMNNPLL*DLIDGDGTGKVIVR
Trigger: CCTCACAATCACTTTCCCAGTGCCATCACCATCTATAAGGTCTCAGAGCAGAGGATTATTCATGGTAATAAGTGGGGGTGTGGTGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR GCA 90 bp AAATGCGGCCCCATATACTGCATCCTAAGCCTACTGCTATGGACCTaGTGGGAGAAGATCTTCATAAGCTTGGTTTCTGATAAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: KCGPIYCILSLLLWT*WEKIFISLVSDKAG
Trigger: GCCTGCCTTATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR GCA 90 bp TCCCTGGAATGTTCCAGCACCAAACAATCTTTCCCTCCTTTTAAATaGGGCCCCATATACTGCATCCTAAGCCTACTGCTATGGACCTGC +
Preference number: 1 (lower is better)
Translates to: SLECSSTKQSFPPFK*GPIYCILSLLLWTC
Trigger: GCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCATTTAAAAGGAGGGAAAGATTGTTTGGTGCTGGAACATTCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR GCA 90 bp CAATTTGATTCCTATCAACCCCTCATGGGAAAGACTAGGAGTCTCTaGCATCGACCTCTAGACAGGACTTCCCTGGAGTCTGCAAAAGCA +
Preference number: 1 (lower is better)
Translates to: QFDSYQPLMGKTRSL*HRPLDRTSLESAKA
Trigger: TGCTTTTGCAGACTCCAGGGAAGTCCTGTCTAGAGGTCGATGGCAGAGACTCCTAGTCTTTCCCATGAGGGGTTGATAGGAATCAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CCA 90 bp TCCACAAACCATCAGACTAAGTCACCCACCAGCCACTGTGCTCCATaGTTAGCTCTCTACTCCCAGATACAAGACCTCTTTCCTGATGTA +
Preference number: 1 (lower is better)
Translates to: STNHQTKSPTSHCAP*LALYSQIQDLFPDV
Trigger: TACATCAGGAAAGAGGTCTTGTATCTGGGAGTAGAGAGCTAACCATGGAGCACAGTGGCTGGTGGGTGACTTAGTCTGATGGTTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR TCA 90 bp GTGGCAAAGGCAATGTTGGCTGTATGGTGTTGCAGGCTCCCAATCTaGGAAACGAACCTTAATATGGTTCTGACACTGGAGACAATGTTG +
Preference number: 1 (lower is better)
Translates to: VAKAMLAVWCCRLPI*ETNLNMVLTLETML
Trigger: CAACATTGTCTCCAGTGTCAGAACCATATTAAGGTTCGTTTCTCAGATTGGGAGCCTGCAACACCATACAGCCAACATTGCCTTTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CCA 90 bp CCTTTTAAATGCGGCCCCATATACTGCATCCTAAGCCTACTGCTATaGACCTGCTGGGAGAAGATCTTCATAAGCTTGGTTTCTGATAAG +
Preference number: 1 (lower is better)
Translates to: PFKCGPIYCILSLLL*TCWEKIFISLVSDK
Trigger: CTTATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCATTTAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR TCA 90 bp GCAGATTATCTCTGCGCAAACTTAGCCCCTTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAACAGTACTCTTTACTGATCTTTGAT +
Preference number: 1 (lower is better)
Translates to: ADYLCANLAPSTSKP*ASVRTKQYSLLIFD
Trigger: ATCAAAGATCAGTAAAGAGTACTGTTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGAAGGGGCTAAGTTTGCGCAGAGATAATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635414.1
3UTR CCA 90 bp TTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTaGCTGCCATGGAAGTTCTCATTTTTGAGAAATGCAAGCCATGCT +
Preference number: 1 (lower is better)
Translates to: LGDASNESSSEKTFS*LPWKFSFLRNASHA
Trigger: AGCATGGCTTGCATTTCTCAAAAATGAGAACTTCCATGGCAGCCAAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 90 bp TTTCTCTGCTTGATAAAATGGGGCTCATTCCTAAAGCCAGCTTGCTaGGACACTAATTTCAGAAGCTCACTTGTCACTTGTTTAACCTCT +
Preference number: 1 (lower is better)
Translates to: FLCLIKWGSFLKPAC*DTNFRSSLVTCLTS
Trigger: AGAGGTTAAACAAGTGACAAGTGAGCTTCTGAAATTAGTGTCTCAGCAAGCTGGCTTTAGGAATGAGCCCCATTTTATCAAGCAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAEPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: RRVNQAALWASSGGTAALGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGGCTAACCACCTGCACTaGTCCCCCATGGCGGTCTGC +
Preference number: 2 (lower is better)
Translates to: RRVNQAALWASSGGTAALANHLH*SPMAVC
Trigger: GCAGACCGCCATGGGGGATCAGTGCAGGTGGTTAGC...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR CCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGAGCCTCCCGAGTAGCTaGGACTACGGGAGCATGCCA +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAESLPSS*DYGSMP
Trigger: TGGCATGCTCCCGTAGTCCCAGCTACTCGGGAGGCT...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR GCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCCCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: EEETILPGTPGIRRRFFSPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: RRVNQAALWASSGGTAALSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 2 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 2 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGCCAGCTGGGATGAATaGTGCACAGGCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQASWDE*CTGTEE
Trigger: TTCCTCTGTGCCTGTGCAGCATTCATCCCAGCTGGC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGTATAGAGTGCCAGGATaGTCCAGGCATTCCCACCAT +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAEYRVPG*SRHSHH
Trigger: ATGGTGGGAATGCCTGGAGCATCCTGGCACTCTATA...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: MGRRVNQAALWASSGGTANQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQNQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGGGTCCCTCTGGCAGGTaGAAGGCAGGTTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRGPSGR*KAGSLS
Trigger: GGACAGTGAACCTGCCTTCCACCTGCCAGAGGGACC...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp GGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTGGAGCTGTGGCCATCCTGTTGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTA +
Preference number: 2 (lower is better)
Translates to: GGADVSCTELYVELWPSCCLCSY*MAGSML
Trigger: TAACATGCTGCCTGCCATCCAGTAGGAGCACAGACA...ACAGGATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR TCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGTGTGAGGTTGGAAGGTaGGAACAGTGTCTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAECEVGR*EQCLRK
Trigger: CTTCCTAAGACACTGTTCTCACCTTCCAACCTCACA...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 2 (lower is better)
Translates to: MGRRVNQAALWASSGGTARSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 2 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTA +
Preference number: 2 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCEEQQL*DLLRAL
Trigger: TAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCACAATGGTGGGGATGGTaGCAGTGGCGTGGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPQWWGW*QWRGKG
Trigger: GCCTTTGCCACGCCACTGCCACCATCCCCACCATTG...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 2 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: RRVNQAALWASSGGTAALLGMRY*SAGWAE
Trigger: TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR TCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGTTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 2 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQLPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTAAGAGGAAACCATACTaGCAGGCACACCTGGGATAC +
Preference number: 2 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSKRKPY*QAHLGY
Trigger: GTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR GCA 90 bp GCTGTGGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACGAGGCAGATTATCTCTaGGCAAACTTAGCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: AVAILWPGGVCNLCLCSYEADYL*ANLAPS
Trigger: TGAAGGGGCTAAGTTTGCGCAGAGATAATCTGCCTC...GTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: KQWEGESTRQPYGQAVEENQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGCTCTTCTGTCACCGCTaGAATGAGGAGTCATTGTTT +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAELFCHR*NEESLF
Trigger: AAACAATGACTCCTCATTCCAGCGGTGACAGAAGAG...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGTCAAACTCTTTCCACTaGGAATGTCCTCTGGACCCA +
Preference number: 2 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRSNSFH*ECPLDP
Trigger: TGGGTCCAGAGGACATTCTCAGTGGAAAGAGTTTGA...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR GCA 90 bp GCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTGGATGGCAGGCAGCATGAGGCAGATTATCTCTaGGCAAACTTAGCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: ARRSVQSLSVLLLDGRQHEADYL*ANLAPS
Trigger: TGAAGGGGCTAAGTTTGCGCAGAGATAATCTGCCTC...ATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR GCA 90 bp ATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTGGATGGCAAGCATGTTAGGAAACTaGACGCAGGTCACAAGGAGG +
Preference number: 2 (lower is better)
Translates to: ILWPGGVCNLCLCSYWMASMLGN*TQVTRR
Trigger: CCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCT...TGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR GCA 90 bp CTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGCGGGGCAGACGTCTCCTaGACTGAGCTCTATGTGGAG +
Preference number: 2 (lower is better)
Translates to: LACFKAPLRVKVPEMRRGGADVS*TELYVE
Trigger: CTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCC...GCCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 2 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 2 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 2 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGACTGCCAGGCACACCTaGGATACGGAGAAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRTARHT*DTEKVL
Trigger: AAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGT...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 2 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR TCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGTTTCAAACTGTAAGCTaGTTAGGTCAAGATGCTCTG +
Preference number: 2 (lower is better)
Translates to: DGWGQSASACPNPKDLAEFQTVS*LGQDAL
Trigger: CAGAGCATCTTGACCTAATCAGCTTACAGTTTGAAA...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWNQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: STLPQRGVPSNEKWQELQLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGGCTCATCTCATGTTCTaGAGAGCTAGGTTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQAHLMF*RARFSN
Trigger: GTTTGAAAACCTAGCTCTCCAGAACATGAGATGAGC...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp AGTAAAGGTCCCAGAAATGAGGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: SKGPRNEEGQTSPALSSMSTSKP*ASVRTK
Trigger: TTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGA...CATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATTTCTGGGACCTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635414.1
3UTR-3UTR CCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCAGATGGTCACCTTTTCTaGCTGATGGACAGGGACTGT +
Preference number: 2 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPDGHLF*LMDRDC
Trigger: ACAGTCCCTGTCCATCAGCCAGAAAAGGTGACCATC...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CAA 90 bp CTAAGCCTACTGCTATGGACCTGCTGGGAGAAGATCTTCATAAGCTaGGTTTCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LSLLLWTCWEKIFIS*VSDKAGQPKCYSSA
Trigger: AGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR GCA 90 bp ACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGTGCAATCTCTGTCTGTaGTCCTACTGGATGGCAGGC +
Preference number: 2 (lower is better)
Translates to: TCLFQSSSQSKGPRNEEGCNLCL*SYWMAG
Trigger: GCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCA...CCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGATCTTGCTCATATGTaGCTTTTGTCCAGAAGAATC +
Preference number: 2 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCDLAHM*LLSRRI
Trigger: GATTCTTCTGGACAAAAGTCACATATGAGCAAGATC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR TCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCACTAGTAAGAGATTTGTaGGGTTGGAAGGTGAGAACA +
Preference number: 2 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPLVRDL*GWKVRT
Trigger: TGTTCTCACCTTCCAACCTCACAAATCTCTTACTAG...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR TCA 90 bp AGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGACGTCTCCTGCACTaGGCTCTATGTGGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: SFALACFKAPLRVKVPEMRRLLH*ALCGAV
Trigger: CACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCT...CATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR TCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR TCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: VISALCKVHQGNFSRNGNSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCACAGCTGCTGAGAAGATaGATGAAAATTCAAGTATGT +
Preference number: 2 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPQLLRR*MKIQVC
Trigger: ACATACTTGAATTTTCATTCATCTTCTCAGCAGCTG...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAATATAATGCCACACCCTaGGGTCCCTCTGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQYNATP*GPSGRW
Trigger: CCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATA...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CCA 90 bp AGGGCTTCCAAATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 2 (lower is better)
Translates to: RASKSSLRLCSLPRCVLIIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
3UTR-3UTR CCA 90 bp TTTCAGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGATGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTA +
Preference number: 2 (lower is better)
Translates to: FQFCTCLFQSSSQSKGPRCLCSY*MAGSML
Trigger: TAACATGCTGCCTGCCATCCAGTAGGAGCACAGACA...TCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR TCA 90 bp TCAAAGTTAGTCCTAGCTAGATTGTTAATTACAAATGAGCCGAGGGAGATTAAAAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SKLVLARLLITNEPREIKSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...TTTAATCTCCCTCGGCTCATTTGTAATTAACAATCTAGCTAGGACTAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR TCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCAGTGTTCACTCAGAATaGCACCGAGTTTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: KETINMSRNLRISAVICSSVHSE*HRVWLL
Trigger: GAGAAGCCAAACTCGGTGTCATTCTGAGTGAACACT...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGCATCTGCTACTATTCTaGTCTTGCTCATATGTGACT +
Preference number: 2 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMHLLLF*SCSYVT
Trigger: AGTCACATATGAGCAAGATCAGAATAGTAGCAGATG...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR-3UTR GCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCGCTGGTCAGTGCCTTTaGTTTTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: KETINMSRNLRISAVICSAGQCL*FCVCVC
Trigger: ACACACACACACACAAAAGCAAAGGCACTGACCAGC...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCACTGAGAATGTCCTCTaGACCCATGTTCTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: KETINMSRNLRISAVICSTENVL*THVLSE
Trigger: TTCAGAGAGAACATGGGTCCAGAGGACATTCTCAGT...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR TCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACTTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 2 (lower is better)
Translates to: VISALCKVHQGNFSRNGNLPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp CTTTGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 2 (lower is better)
Translates to: LCSLPRCVLIDIYLAVPVEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...AACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
3UTR-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAACCTCAAACCAGAGGTaGAGACTTCTATGGTCCACA +
Preference number: 2 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQTSNQR*RLLWST
Trigger: TGTGGACCATAGAAGTCTTCACCTCTGGTTTGAGGT...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR GCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGGCTTCTCTTCTGGGTaGTGCAGATCAAACTCTTTC +
Preference number: 2 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQGFSSG*CRSNSF
Trigger: GAAAGAGTTTGATCTGCAGCACCCAGAAGAGAAGCC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 2 (lower is better)
Translates to: VISALCKVHQGNFSRNGNPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp TCAAAGTTAGTCCTAGCTAGATTGTTAATTACAAATGAGCCGAGGGAGATTAAAGGACCATTTATGCCTTaGTGGAGTCTTGGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: SKLVLARLLITNEPREIKGPFMP*WSLGLC
Trigger: ACACAGGCCAAGACTCCACCAAGGCATAAATGGTCC...TTTAATCTCCCTCGGCTCATTTGTAATTAACAATCTAGCTAGGACTAACTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCTAGTTGGAAGTCCCTaGCAGCATGGGAAACAATTT +
Preference number: 2 (lower is better)
Translates to: VISALCKVHQGNFSRNGNLVGSP*QHGKQF
Trigger: AAATTGTTTCCCATGCTGCCAGGGACTTCCAACTAG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR GCA 90 bp TGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTAAAATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 2 (lower is better)
Translates to: CSLPRCVLIDIYLAVPVKMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...TTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635324.1
3UTR-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGCCACTAAACTCAAATaGAAATTGGGCATGAGAAGA +
Preference number: 2 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQATKLK*KLGMRR
Trigger: TCTTCTCATGCCCAATTTTCATTTGAGTTTAGTGGC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CCA 90 bp TCAAAGTTAGTCCTAGCTAGATTGTTAATTACAAATGAGCCGAGGGAGATTAAAGGTTTAAATGTGAAATaGAAGAGGTGGCTGGAACAC +
Preference number: 2 (lower is better)
Translates to: SKLVLARLLITNEPREIKGLNVK*KRWLEH
Trigger: GTGTTCCAGCCACCTCTTCCATTTCACATTTAAACC...TTTAATCTCCCTCGGCTCATTTGTAATTAACAATCTAGCTAGGACTAACTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR CCA 72 bp CAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGG +
Preference number: 3 (lower is better)
Translates to: QPYGQAVEEQQL*DLLRALGRRRW
Trigger: CCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CAA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR TCA 72 bp ACCTGCACTGATCCCCCATGGCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTATTGGTCTGCCGGCTG +
Preference number: 3 (lower is better)
Translates to: TCTDPPWRSAAK*DVRYEVLVCRL
Trigger: CAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACCGCCATGGGGGATCAGTGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR CCA 72 bp GCAGACGTCTCCTGCACTGAGCTCTATGTGGAGCTGTaGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCT +
Preference number: 3 (lower is better)
Translates to: ADVSCTELYVEL*PSCGQEECAIS
Trigger: AGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR CAA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCTTACCCCCAGCCTCTaGATCTCCTTCTGCAGACAA +
Preference number: 3 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQLTPSL*ISFCRQ
Trigger: TTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAAG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 72 bp GGAGAAAGCTCAGAAACTACAGAGCAAGTGGATGGGTaGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAG +
Preference number: 3 (lower is better)
Translates to: GESSETTEQVDG*GQSASACPNPK
Trigger: CTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATCCACTTGCTCTGTAGTTTCTGAGCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 72 bp AGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTCCTCGGCGCTCTGATG +
Preference number: 3 (lower is better)
Translates to: SETLGMRYWSAG*AEFPTLLGALM
Trigger: CATCAGAGCGCCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR CCA 72 bp GGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAATTTCCCACTCTCCTC +
Preference number: 3 (lower is better)
Translates to: GLQPSETLGMRY*SAGWAEFPTLL
Trigger: GAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR CCA 72 bp CCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTAGGAAACTGCACGCAG +
Preference number: 3 (lower is better)
Translates to: PGGVCNLCLCSY*MAGSMLGNCTQ
Trigger: CTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR TCA 72 bp GACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGGCGCTCTGATGATACA +
Preference number: 3 (lower is better)
Translates to: DVRYEVLVCRLG*ISHSPRRSDDT
Trigger: TGTATCATCAGAGCGCCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
3UTR GCA 72 bp TGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTaGACGCAGGTCACAAGGAGGCAGATTATCTCTGCG +
Preference number: 3 (lower is better)
Translates to: CSYWMAGSMLGN*TQVTRRQIISA
Trigger: CGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR GCA 72 bp ATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTaGTCCTACTGGATGGCAGGCAGCATGTTAGGAAAC +
Preference number: 3 (lower is better)
Translates to: ILWPGGVCNLCL*SYWMAGSMLGN
Trigger: GTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR-3UTR CAA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR-3UTR CAA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCACCCCTCTGCCCTCTCTaGAGAGGCAAGGCATTTTCT +
Preference number: 3 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPPLCPL*RGKAFS
Trigger: AGAAAATGCCTTGCCTCTCAAGAGAGGGCAGAGGGG...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 72 bp AGGGCTGGCCTGGGATTTGGTCTGGAGCTCATGAACTaGAAATGTCTCACCTGTACTGAAAGAGGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: RAGLGFGLELMN*KCLTCTERGVG
Trigger: ACCCACCCCTCTTTCAGTACAGGTGAGACATTTTCAGTTCATGAGCTCCAGACCAAATCCCAGGCCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR GCA 72 bp CTGCCATCGACCTCTAGACAGGACTTCCCTGGAGTCTaGAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: LPSTSRQDFPGV*KSKNPRDKCLS
Trigger: TGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCCAGGGAAGTCCTGTCTAGAGGTCGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR GCA 72 bp TCCTATCAACCCCTCATGGGAAAGACTAGGAGTCTCTaGCATCGACCTCTAGACAGGACTTCCCTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: SYQPLMGKTRSL*HRPLDRTSLES
Trigger: AGACTCCAGGGAAGTCCTGTCTAGAGGTCGATGGCAGAGACTCCTAGTCTTTCCCATGAGGGGTTGATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CAA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCACTTACCCCCAGCCTCTaGATCTCCTTCTGCAGACAA +
Preference number: 3 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPLTPSL*ISFCRQ
Trigger: TTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAAG...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR TCA 72 bp GCCTTTGCTTTTGTGTGTGTGTGTGTGGAAGCAGGGTaGGGGGCTGAAGAGAGGCACTCAGTAGAGTATAGA +
Preference number: 3 (lower is better)
Translates to: AFAFVCVCVEAG*GAEERHSVEYR
Trigger: TCTATACTCTACTGAGTGCCTCTCTTCAGCCCCTCACCCTGCTTCCACACACACACACACAAAAGCAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 72 bp GGACATTCAGAACAGCTGTCCTCTTGTGGGTGTTACTaGAATGGCTGCACCACACCCCCACTTATTACCATG +
Preference number: 3 (lower is better)
Translates to: GHSEQLSSCGCY*NGCTTPPLITM
Trigger: CATGGTAATAAGTGGGGGTGTGGTGCAGCCATTCCAGTAACACCCACAAGAGGACAGCTGTTCTGAATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CAA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: EEETILPGTPGIRRRFFSFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
3UTR GCA 72 bp CAATCTTTCCCTCCTTTTAAATGCGGCCCCATATACTaGATCCTAAGCCTACTGCTATGGACCTGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: QSFPPFKCGPIY*ILSLLLWTCWE
Trigger: CTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCATTTAAAAGGAGGGAAAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 72 bp TGCGGCCCCATATACTGCATCCTAAGCCTACTGCTATaGACCTGCTGGGAGAAGATCTTCATAAGCTTGGTT +
Preference number: 3 (lower is better)
Translates to: CGPIYCILSLLL*TCWEKIFISLV
Trigger: AACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR TCA 72 bp TGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTaGGAAGACGTTTTCTTGGCTGCCATGGAAGTTCTC +
Preference number: 3 (lower is better)
Translates to: CGLGRCIKRKFL*EDVFLAAMEVL
Trigger: GAGAACTTCCATGGCAGCCAAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 72 bp CTCTGCGCAAACTTAGCCCCTTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAACAGTACTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: LCANLAPSTSKP*ASVRTKQYSLL
Trigger: CAGTAAAGAGTACTGTTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGAAGGGGCTAAGTTTGCGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635414.1
3UTR-3UTR CAA 90 bp AGGGCTTCCAAATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 3 (lower is better)
Translates to: RASKSSLRLCSLPRCVLIGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
3UTR TCA 72 bp GCAATGTTGGCTGTATGGTGTTGCAGGCTCCCAATCTaGGAAACGAACCTTAATATGGTTCTGACACTGGAG +
Preference number: 3 (lower is better)
Translates to: AMLAVWCCRLPI*ETNLNMVLTLE
Trigger: CTCCAGTGTCAGAACCATATTAAGGTTCGTTTCTCAGATTGGGAGCCTGCAACACCATACAGCCAACATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR TCA 72 bp ACACCCCCACTTATTACCATGAATAATCCTCTGCTCTaGGACCTTATAGATGGTGATGGCACTGGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: TPPLITMNNPLL*DLIDGDGTGKV
Trigger: CACTTTCCCAGTGCCATCACCATCTATAAGGTCTCAGAGCAGAGGATTATTCATGGTAATAAGTGGGGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR GCA 72 bp CCCATATACTGCATCCTAAGCCTACTGCTATGGACCTaGTGGGAGAAGATCTTCATAAGCTTGGTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: PIYCILSLLLWT*WEKIFISLVSD
Trigger: ATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR GCA 72 bp TGTTCCAGCACCAAACAATCTTTCCCTCCTTTTAAATaGGGCCCCATATACTGCATCCTAAGCCTACTGCTA +
Preference number: 3 (lower is better)
Translates to: CSSTKQSFPPFK*GPIYCILSLLL
Trigger: TAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCATTTAAAAGGAGGGAAAGATTGTTTGGTGCTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR-3UTR CAA 90 bp TCAAAGTTAGTCCTAGCTAGATTGTTAATTACAAATGAGCCGAGGGAGATTAAAGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: SKLVLARLLITNEPREIKELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...TTTAATCTCCCTCGGCTCATTTGTAATTAACAATCTAGCTAGGACTAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR-3UTR CAA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCCAATATTCACAGTCCTaGTGGGGAAGGGGTGTGATA +
Preference number: 3 (lower is better)
Translates to: KETINMSRNLRISAVICSQYSQS*WGRGVI
Trigger: TATCACACCCCTTCCCCACAAGGACTGTGAATATTG...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR TCA 72 bp ATGGAATACAGAATTAAGAGAAGAGGTGAGCCGCAGTaGCTAGGTGATAGAACAGAAGACGCTAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: MEYRIKRRGEPQ*LGDRTEDAKES
Trigger: AGATTCCTTAGCGTCTTCTGTTCTATCACCTAGTCACTGCGGCTCACCTCTTCTCTTAATTCTGTATTCCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
3UTR CCA 72 bp ATATACTGCATCCTAAGCCTACTGCTATGGACCTGCTaGGAGAAGATCTTCATAAGCTTGGTTTCTGATAAG +
Preference number: 3 (lower is better)
Translates to: IYCILSLLLWTC*EKIFISLVSDK
Trigger: CTTATCAGAAACCAAGCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAGGATGCAGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
3UTR CCA 72 bp TCTGACACTGGAGACAATGTTGTTAGGGCAACTCAATaGGAATGGAGAGCTGGTTTAAATGTGAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: SDTGDNVVRATQ*EWRAGLNVKWK
Trigger: CTTCCATTTCACATTTAAACCAGCTCTCCATTCCCATTGAGTTGCCCTAACAACATTGTCTCCAGTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CCA 72 bp AGATCACATTTGTGTTTTCCATGGTGCCCTAGGAAATaGGCTACTCTGAGATCACATATCAGAACCCATTTT +
Preference number: 3 (lower is better)
Translates to: RSHLCFPWCPRK*ATLRSHIRTHF
Trigger: AAAATGGGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAAATGTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
3UTR TCA 72 bp ACAAGAATGCCAAATTATTTTTGTTCACAGGAGTCTTaGATCGCATCAAAGTTAGTCCTAGCTAGATTGTTA +
Preference number: 3 (lower is better)
Translates to: TRMPNYFCSQES*IASKLVLARLL
Trigger: TAACAATCTAGCTAGGACTAACTTTGATGCGATTCAAGACTCCTGTGAACAAAAATAATTTGGCATTCTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLVQQC*KAQMRR
Trigger: CCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGCCAGCTGGGATGAATaGTGCACAGGCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLASWDE*CTGTEE
Trigger: TTCCTCTGTGCCTGTGCAGCATTCATCCCAGCTGGC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLNQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGGAGCAAGTGGATGGGTaGGGACAGTCAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPEQVDG*GQSASA
Trigger: TGCACTCGCTGACTGTCCCCACCCATCCACTTGCTC...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHLVQQC*KAQMRR
Trigger: CCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAG...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGAGTCGCAAATCCAGCTaGAAGGCAGCTTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPSRKSS*KAACPA
Trigger: TGCAGGGCAAGCTGCCTTGCAGCTGGATTTGCGACT...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGGGCCTGAGGACTCCTaGGAGGCACTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHGPEDS*EALVTC
Trigger: ACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTAPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPEEQQL*DLLRAL
Trigger: TAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTC...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGACTGCCAGGCACACCTaGGATACGGAGAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLTARHT*DTEKVL
Trigger: AAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGT...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGAARRK*GGRGPL
Trigger: GAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGTTGAGCTAACCACCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLVELTT*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGGTGGTTAGCTCAAC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTTGAGGAGGGAGCCCTaGTTCGCTGATGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHLRREP*FADGPE
Trigger: TTCAGGCCCATCAGCGAATCAGGGCTCCCTCCTCAA...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSPRGAK*FSTHPQ
Trigger: CTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGG...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGGACCATTTATGCCTTaGTGGAGTCTTGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLGPFMP*WSLGLC
Trigger: ACACAGGCCAAGACTCCACCAAGGCATAAATGGTCC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGGCAATGTTGGCTGTATaGTGTTGCAGGCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLAMLAV*CCRLPI
Trigger: GATTGGGAGCCTGCAACACCATACAGCCAACATTGC...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGTTAGGATGCAATGTCTaGGGGACTGTAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPLGCNV*GTVELG
Trigger: CCCAAGCTCTACAGTCCCTCAGACATTGCATCCTAA...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGAAGAGGAAACCATACTaGCAGGCACACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPKRKPY*QAHLGY
Trigger: GTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGCGGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGGGCCTGAGGACTCCTaGGAGGCACTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: GGLQPSETLGMRYWSAGWGPEDS*EALVTC
Trigger: ACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCC...CCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACCCCTTGGGGGCAGTCTaGAGTGAGATCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHPLGAV*SEISGK
Trigger: CTTTCCAGAGATCTCACTCCAGACTGCCCCCAAGGG...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQAARRK*GGRGPL
Trigger: GAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCAARRK*GGRGPL
Trigger: GAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGC...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR TCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGCTAACCACCTGCACTaGTCCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCANHLH*SPMAVC
Trigger: GCAGACCGCCATGGGGGATCAGTGCAGGTGGTTAGC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSPRGAK*FSTHPQ
Trigger: CTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGG...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGTGCCTCTTCCCCTGTaGCAGATGGCTGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHVPLPL*QMAELL
Trigger: TAACAACTCAGCCATCTGGCACAGGGGAAGAGGCAC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTATPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCCTGGCTGCCCGCACTaGCCCCTTCTGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPPGCPH*PLLGAS
Trigger: AGATGCCCCCAGAAGGGGCCAGTGCGGGCAGCCAGG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCATGTTCTCTCTGAATaGCTTGGCCGGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQHVLSE*LGRPHP
Trigger: GGGATGGGGCCGGCCAAGCCATTCAGAGAGAACATG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTATTCACAGTCCTTGTaGGGAAGGGGTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLYSQSL*GRGVIL
Trigger: CAATATCACACCCCTTCCCCACAAGGACTGTGAATA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACATGATCCACTTGCCTTaGCCTCCCAAACTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHMIHLP*PPKLLG
Trigger: TCCCAGCAGTTTGGGAGGCCAAGGCAAGTGGATCAT...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAAGCCTCCCGAGTAGCTaGGACTACGGGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTASLPSS*DYGSMP
Trigger: TGGCATGCTCCCGTAGTCCCAGCTACTCGGGAGGCT...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSAARRK*GGRGPL
Trigger: GAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTANPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLQPSETLGMRYWSAGWASCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...AGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR TCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGTGTGGGGAAGGGGTGTaGTATTGTATCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: DGWGQSASACPNPKDLAECGEGV*YCISLP
Trigger: TGGCAGGGAGATACAATATCACACCCCTTCCCCACA...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCTAGTAAGAGATTTGTaGGGTTGGAAGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLVRDL*GWKVRT
Trigger: TGTTCTCACCTTCCAACCTCACAAATCTCTTACTAG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPPRGAK*FSTHPQ
Trigger: CTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCLVQQC*KAQMRR
Trigger: CCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCACTAGGCCCTGGCTaGCCGCACTGGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSPLGPG*PHWPLL
Trigger: CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGG...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCCCTTGGGGGCAGTCTaGAGTGAGATCTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQPLGAV*SEISGK
Trigger: CTTTCCAGAGATCTCACTCCAGACTGCCCCCAAGGG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGTGCAAGGGCTGGCCTaGGATTTGGTCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQVQGLA*DLVWSS
Trigger: TGAGCTCCAGACCAAATCCCAGGCCAGCCCTTGCAC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACATACTCAGGAACACATaGTTCCCAGCAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHILRNT*FPAAWA
Trigger: AGCCCAAGCTGCTGGGAACCATGTGTTCCTGAGTAT...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTAARRK*GGRGPL
Trigger: GAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGGTTGAGCTAACCACCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DGWGQSASACPNPKDLAEVELTT*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGGTGGTTAGCTCAAC...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGACCCATGTTCTCTCTaGATGGCTTGGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSDPCSL*MAWPAP
Trigger: TGGGGCCGGCCAAGCCATTCAGAGAGAACATGGGTC...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCTATAATGCCACACCCTaGGGTCCCTCTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCYNATP*GPSGRW
Trigger: CCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATA...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACCTGTCACCGCTGGAATaGGGAGTCATTGTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHLSPLE*GVIVWL
Trigger: TAACCAAACAATGACTCCTCATTCCAGCGGTGACAG...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCTGTGTGGAAGCAGGGTaGGGGGCTGAAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLCVEAG*GAEERH
Trigger: GTGCCTCTCTTCAGCCCCTCACCCTGCTTCCACACA...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGGTCACCTTTTCTGGCTaGTGGACAGGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: DGWGQSASACPNPKDLAEVTFSG*WTGTVF
Trigger: GAAAACAGTCCCTGTCCATCAGCCAGAAAAGGTGAC...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTGGAGCTGTGGCCATCCTGTAGAGGTGAGCCGCAGTaGCTAGGTGATAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: GGADVSCTELYVELWPSCRGEPQ*LGDRTE
Trigger: TTCTGTTCTATCACCTAGTCACTGCGGCTCACCTCT...ACAGGATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAACCTGGTCCAGCAGTaGTGCAAGGCGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYNLVQQ*CKAQMR
Trigger: CCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGTT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634654.1
CDS-3UTR GCA 90 bp GGCGGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: GGLQPSETLGMRYWSAGWMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...CCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR GCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTCAAGTATGTTTTCTTaGCAACCTGAGTGTTCACTC +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLSSMFS*QPECSL
Trigger: GAGTGAACACTCAGGTTGGCAAGAAAACATACTTGA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp GTGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGGGGCAGACGTCTCCTaGACTGAGCTCTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLLLDGRQHVRKLHAGHKGADVS*TELYVE
Trigger: CTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCC...CTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQEEQQL*DLLRAL
Trigger: TAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTC...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSNQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCACCCTGAGGTCCCTCTaGCAGGTGGAAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLTLRSL*QVEGRF
Trigger: GAACCTGCCTTCCACCTGCCAGAGGGACCTCAGGGT...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGGCTGGCCTGGGATTTaGTCTGGAGCTCATGAACTG +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTAGWPGI*SGAHEL
Trigger: CAGTTCATGAGCTCCAGACCAAATCCCAGGCCAGCC...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACTCACAACTGTCCTCCTaGTCCAGCAGTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYSQLSS*SSSAAR
Trigger: CCTTGCAGCACTGCTGGACCAGGAGGACAGTTGTGA...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTGGATGGCAGGCAGCATAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ARRSVQSLSVLLLDGRQHKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...ATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGGCCACTAAACTCAAATaGAAATTGGGCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPATKLK*KLGMRR
Trigger: TCTTCTCATGCCCAATTTTCATTTGAGTTTAGTGGC...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGTGTGGGGAAGGGGTGTaGTATTGTATCTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRCGEGV*YCISLP
Trigger: TGGCAGGGAGATACAATATCACACCCCTTCCCCACA...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTGTGTGGAAGCAGGGTaGGGGGCTGAAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPCVEAG*GAEERH
Trigger: GTGCCTCTCTTCAGCCCCTCACCCTGCTTCCACACA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGGTGCGTAGAGCAACTTaGCCAACTCTTACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALVRRAT*PTLTAE
Trigger: CTCTGCAGTAAGAGTTGGTCAAGTTGCTCTACGCAC...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCATGTCTCACCTGTACTaGAAGAGGGGTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCMSHLY*KRGGWG
Trigger: TCCCCACCCACCCCTCTTTCAGTACAGGTGAGACAT...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACCCTGTGCCAGATGGCTaGGTTGTTAACATCATAATG +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHPVPDG*VVNIIM
Trigger: CATTATGATGTTAACAACTCAGCCATCTGGCACAGG...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR TCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGAATGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LQPSETLGMRYWSAGWAEWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR GCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTAMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGTGCGGCCCCATATACTaGATCCTAAGCCTACTGCTA +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQCGPIY*ILSLLL
Trigger: TAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCA...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGATACTGGGAAAAACATaGTTAGAGGCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: DGWGQSASACPNPKDLAEILGKT*LEARPP
Trigger: AGGTGGCCGTGCCTCTAAGCATGTTTTTCCCAGTAT...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTATAGAGTGCCAGGATaGTCCAGGCATTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALYRVPG*SRHSHH
Trigger: ATGGTGGGAATGCCTGGAGCATCCTGGCACTCTATA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGTTGAGCTAACCACCTaGACTGATCCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEVELTT*TDPPWR
Trigger: CCGCCATGGGGGATCAGTGCAGGTGGTTAGCTCAAC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp AATGAGGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTGGAGCTGTGGCCATTGCAATCTCTGTCTGTaGTCCTACTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NEEGQTSPALSSMWSCGHCNLCL*SYWMAG
Trigger: GCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCA...ATGGCCACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp TGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGTGGCCAGGAGGAGTGTaGAATCTCTGTCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSYWMAGSMLGNCTQVTRWPGGV*NLCLCS
Trigger: GGAGCACAGACAGAGATTGCACACTCCTCCTGGCCA...CCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp GGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCGGGGCAGACGTCTCCTaGACTGAGCTCTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRQHVRKLHAGHKEADYLGADVS*TELYVE
Trigger: CTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCC...GAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGGGCCTGAGGACTCCTaGGAGGCACTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPGPEDS*EALVTC
Trigger: ACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGAAGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LQPSETLGMRYWSAGWAEEEQQL*DLLRAL
Trigger: TAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTC...TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACGAGGAACAGCAGCTCTaGGACCTGCTCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNEEQQL*DLLRAL
Trigger: TAAGGCTCTGAGCAGGTCCCAGAGCTGCTGTTCCTC...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGGGTCCCTCTGGCAGGTaGAAGGCAGGTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLGPSGR*KAGSLS
Trigger: GGACAGTGAACCTGCCTTCCACCTGCCAGAGGGACC...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTATGATCCACTTGCCTTaGCCTCCCAAACTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSMIHLP*PPKLLG
Trigger: TCCCAGCAGTTTGGGAGGCCAAGGCAAGTGGATCAT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCAAGCCTCCCGAGTAGCTaGGACTACGGGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPSLPSS*DYGSMP
Trigger: TGGCATGCTCCCGTAGTCCCAGCTACTCGGGAGGCT...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCTAACCCCAAGGATCTaGCTGAGGCATACAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALLTPRI*LRHTAK
Trigger: CTTAGCTGTATGCCTCAGCCAGATCCTTGGGGTTAG...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGAGCAAGTGGATGGGTaGGGACAGTCAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGEQVDG*GQSASA
Trigger: TGCACTCGCTGACTGTCCCCACCCATCCACTTGCTC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACCCATTTATGCCTTGGTaGAGTCTTGGCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYPFMPW*SLGLCA
Trigger: GGCACACAGGCCAAGACTCCACCAAGGCATAAATGG...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGTGGCAAAGGCAATGTTaGCTGTATGGTGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQWQRQC*LYGVAG
Trigger: GCCTGCAACACCATACAGCCAACATTGCCTTTGCCA...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGCAATGGTGGGGATGGTaGCAGTGGCGTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLQWWGW*QWRGKG
Trigger: GCCTTTGCCACGCCACTGCCACCATCCCCACCATTG...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CAGAGTAAAGGTCCCAGAAATGAGGAGGGGCAGACGTCTCCTGCACTGAGCTCTGCACTGAGCTCTATGTaGAGCTGTGGCCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: QSKGPRNEEGQTSPALSSALSSM*SCGHPV
Trigger: CACAGGATGGCCACAGCTCCACATAGAGCTCAGTGC...AGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATTTCTGGGACCTTTACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGAGCCAAAAGTGCACTaGCCTCACAACTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQEPKVH*PHNCPP
Trigger: AGGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSQLSIG*ANHLIS
Trigger: CGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQQLSIG*ANHLIS
Trigger: CGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGTTAGGATGCAATGTCTaGGGGACTGTAGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRLGCNV*GTVELG
Trigger: CCCAAGCTCTACAGTCCCTCAGACATTGCATCCTAA...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp ACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TIFISGSLPSQFSLMVPEVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...TTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGCTAACCACCTGCACTaGTCCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSANHLH*SPMAVC
Trigger: GCAGACCGCCATGGGGGATCAGTGCAGGTGGTTAGC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp CTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGCAAACTTAGCCCCTTCAAGACGTCTCCTGCACTaGGCTCTATGTGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LHAGHKEADYLCANLAPSRRLLH*ALCGAV
Trigger: CACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCT...TGAAGGGGCTAAGTTTGCGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp TGTGGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTGAGAGGTGAGCCGCAGTaGCTAGGTGATAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: CGHPVARRSVQSLSVLLLRGEPQ*LGDRTE
Trigger: TTCTGTTCTATCACCTAGTCACTGCGGCTCACCTCT...CAGTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCLVQQC*KAQMRR
Trigger: CCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAG...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGCAGGCCAGCCCAAATaGTACAGCTCAGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEAGQPK*YSSAIG
Trigger: CCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGAGTCGCAAATCCAGCTaGAAGGCAGCTTGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRSRKSS*KAACPA
Trigger: TGCAGGGCAAGCTGCCTTGCAGCTGGATTTGCGACT...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGAAGACTAGGAGTCTCTaGCATCGACCTCTAGACAGG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQKTRSL*HRPLDR
Trigger: CCTGTCTAGAGGTCGATGGCAGAGACTCCTAGTCTT...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGGTTGAGCTAACCACCTaGACTGATCCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLVELTT*TDPPWR
Trigger: CCGCCATGGGGGATCAGTGCAGGTGGTTAGCTCAAC...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCTCCTGGTCCAGCAGTaGTGCAAGGCGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPLLVQQ*CKAQMR
Trigger: CCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGAG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCACCCACCCGCAGCGGTaGTTTCTCTCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPTHPQR*FLSFPG
Trigger: TCCTGGGAAAGAGAGAAACCACCGCTGCGGGTGGGT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634811.1
CDS-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGGGCCTGAGGACTCCTaGGAGGCACTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWGPEDS*EALVTC
Trigger: ACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCATTGTCCTACTACCTaGAGAAAAGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPHCPTT*RKEFVK
Trigger: TTTGACAAACTCTTTTCTCCAGGTAGTAGGACAATG...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGACATGGCTATCTAGTTaGAAGTCCCTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRTWLSS*KSLAAW
Trigger: CCATGCTGCCAGGGACTTCCAACTAGATAGCCATGT...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTACCCTGAGGTCCCTCTaGCAGGTGGAAGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSTLRSL*QVEGRF
Trigger: GAACCTGCCTTCCACCTGCCAGAGGGACCTCAGGGT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACTAAGCCTACTGCTATaGACCTGCTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTALSLLL*TCWEKI
Trigger: GATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAG...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGACCATACTTGTGAAATaGAGAAAGCTCAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPTILVK*RKLRNY
Trigger: GTAGTTTCTGAGCTTTCTCCATTTCACAAGTATGGT...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCCATTTATGCCTTGGTaGAGTCTTGGCCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNPFMPW*SLGLCA
Trigger: GGCACACAGGCCAAGACTCCACCAAGGCATAAATGG...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGACACAAGTGATACCCTaGTCAAAAGGGAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRTQVIP*SKGSRG
Trigger: CCCCCTACTCCCTTTTGACCAGGGTATCACTTGTGT...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTACACAAGTGATACCCTaGTCAAAAGGGAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSTQVIP*SKGSRG
Trigger: CCCCCTACTCCCTTTTGACCAGGGTATCACTTGTGT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGATGGTCACCTTTTCTaGCTGATGGACAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQDGHLF*LMDRDC
Trigger: ACAGTCCCTGTCCATCAGCCAGAAAAGGTGACCATC...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGTACAAATACCGGAAGTaGGTTTTCTGGTTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPYKYRK*VFWLCF
Trigger: AAAACACAACCAGAAAACCCACTTCCGGTATTTGTA...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGGACCCATGTTCTCTCTaGATGGCTTGGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMDPCSL*MAWPAP
Trigger: TGGGGCCGGCCAAGCCATTCAGAGAGAACATGGGTC...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGTGTTCACTCAGAATaGCACCGAGTTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSSVHSE*HRVWLL
Trigger: GAGAAGCCAAACTCGGTGTCATTCTGAGTGAACACT...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTACCTCAAACCAGAGGTaGAGACTTCTATGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSTSNQR*RLLWST
Trigger: TGTGGACCATAGAAGTCTTCACCTCTGGTTTGAGGT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGTCCAATGGAACAGATaGAGCCCAGTACCTCTGATC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCVQWNR*SPVPLI
Trigger: GATCAGAGGTACTGGGCTTCATCTGTTCCATTGGAC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTTGAGGAGGGAGCCCTaGTTCGCTGATGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQLRREP*FADGPE
Trigger: TTCAGGCCCATCAGCGAATCAGGGCTCCCTCCTCAA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTTGGTCTGGAGCTCATaGACTGAAAATGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALLVWSS*TENVSP
Trigger: AGGTGAGACATTTTCAGTTCATGAGCTCCAGACCAA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGGAAATGGGCTACTCTaGGATCACATATCAGAACCC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYGNGLL*DHISEP
Trigger: GGGTTCTGATATGTGATCTCAGAGTAGCCCATTTCC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATTCAGCCCAGCCGGCAGAC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGCTAACCACCTGCACTaGTCCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTANHLH*SPMAVC
Trigger: GCAGACCGCCATGGGGGATCAGTGCAGGTGGTTAGC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR TCA 90 bp AGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGCAAACTTAGCCAGACGTCTCCTGCACTaGGCTCTATGTGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RKLHAGHKEADYLCANLARRLLH*ALCGAV
Trigger: CACAGCTCCACATAGAGCTCAGTGCAGGAGACGTCT...GGCTAAGTTTGCGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp GGTTCTTTGAGTGCACGTATTCCATTCGAGAAAGCAGCTGGATGGCTATCATTACCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: GSLSARIPFEKAAGWLSLPRGAK*FSTHPQ
Trigger: CTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGG...TAATGATAGCCATCCAGCTGCTTTCTCGAATGGAATACGTGCACTCAAAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAAGAGGAAACCATACTaGCAGGCACACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNKRKPY*QAHLGY
Trigger: GTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAAGAGGAAACCATACTaGCAGGCACACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCKRKPY*QAHLGY
Trigger: GTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGGCTTCTCTTCTGGGTaGTGCAGATCAAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYGFSSG*CRSNSF
Trigger: GAAAGAGTTTGATCTGCAGCACCCAGAAGAGAAGCC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGGCAGGCCAGCCCAAATaGTACAGCTCAGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLAGQPK*YSSAIG
Trigger: CCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGC...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTATACTGGGAAAAACATaGTTAGAGGCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSILGKT*LEARPP
Trigger: AGGTGGCCGTGCCTCTAAGCATGTTTTTCCCAGTAT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAACCCACCAGCCACTGTaGTCCATGGTTAGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEETHQPL*SMVSSL
Trigger: TAGAGAGCTAACCATGGAGCACAGTGGCTGGTGGGT...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGTTGAGCTAACCACCTaGACTGATCCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQVELTT*TDPPWR
Trigger: CCGCCATGGGGGATCAGTGCAGGTGGTTAGCTCAAC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTC +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLPLSQK*TGLTTV
Trigger: GACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAGCCGAGGGGCGGCTaGAGCCGAACCGGAACCACT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEEPRGG*SRTGTT
Trigger: AGTGGTTCCGGTTCGGCTCCAGCCGCCCCTCGGCTC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGACCCACCCGCAGCGGTaGTTTCTCTCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWTHPQR*FLSFPG
Trigger: TCCTGGGAAAGAGAGAAACCACCGCTGCGGGTGGGT...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634811.1
CDS-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGAACATCTTGTAACCTaGTCCAGCAGTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCEHLVT*SSSAAR
Trigger: CCTTGCAGCACTGCTGGACCAGGTTACAAGATGTTC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634654.1
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTAACCAGGCAGCCCTATaGGCAAGCAGTGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLNQAAL*ASSGGT
Trigger: TGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGGTTTGGCTTCTCTTCTaGGTGCTGCAGATCAAACTC +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRVWLLF*VLQIKL
Trigger: GAGTTTGATCTGCAGCACCCAGAAGAGAAGCCAAAC...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCAGTCTCCTTTTCCCTaGAATGTTCCAGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQQSPFP*NVPAPN
Trigger: GTTTGGTGCTGGAACATTCCAGGGAAAAGGAGACTG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCATACAGAGCAAGTGGATaGGTGGGGACAGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPYRASG*VGTVSE
Trigger: CTCGCTGACTGTCCCCACCCATCCACTTGCTCTGTA...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTCATGAGTGCACACTaGCTGTCAGGATACTCTATC +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSVMSAH*LSGYSI
Trigger: GATAGAGTATCCTGACAGCCAGTGTGCACTCATGAC...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCTGCCTGTCACTTACGTaGCCAATTCAGATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCCLSLT*PIQMGC
Trigger: GCAACCCATCTGAATTGGCCACGTAAGTGACAGGCA...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCCCAGCAGCTTGGGCTaGGTCTTTATGGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNPSSLG*VFMEVK
Trigger: TTTCACTTCCATAAAGACCCAGCCCAAGCTGCTGGG...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AGGGCTTCCAAATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: RASKSSLRLCSLPRCVLINPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTCACTCCAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AIPVLTDGPRNVSEGSHSRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...GGAGTGAGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGCAAACTTAGCCCCTTCAGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LHAGHKEADYLCANLAPSAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...TGAAGGGGCTAAGTTTGCGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS-3UTR TCA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGCTGCAGGTACAATTaGGTCAGAGTCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMSCRYN*VRVPRA
Trigger: GGCCCTGGGGACTCTGACTCAATTGTACCTGCAGCT...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCTTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGLPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAATTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEELPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACTCAAACTCTTTCCACTaGGAATGTCCTCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNSNSFH*ECPLDP
Trigger: TGGGTCCAGAGGACATTCTCAGTGGAAAGAGTTTGA...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACTGCAGAGACACAAGTaGTACCCTGGTCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEELQRHK*YPGQKG
Trigger: TCCCTTTTGACCAGGGTATCACTTGTGTCTCTGCAG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGCTGCAGAGACACAAGTaGTACCCTGGTCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRLQRHK*YPGQKG
Trigger: TCCCTTTTGACCAGGGTATCACTTGTGTCTCTGCAG...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTGTTCACAGGAGTCTTaGATCGCATCAAAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALCSQES*IASKLV
Trigger: GACTAACTTTGATGCGATTCAAGACTCCTGTGAACA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TGCAATCTCTGTCTGTGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCAGGGAACAGTCCACCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CNLCLCSYWMAGSMLGNCREQST*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGGTGGACTGTTCCCT...GCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHPRGAK*FSTHPQ
Trigger: CTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR GCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTCACTCCGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: AIPVLTDGPRNVSEGSHSVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...GGAGTGAGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp GCTGTGGCCATCCTGTGGCCAGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: AVAILWPGGVCNLCLCSYAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...GTAGGAGCACAGACAGAGATTGCACACTCCTCCTGGCCACAGGATGGCCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGCCAGCTGGGATGAATaGTGCACAGGCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSASWDE*CTGTEE
Trigger: TTCCTCTGTGCCTGTGCAGCATTCATCCCAGCTGGC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGGCTTCTCTTCTGGGTaGTGCAGATCAAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCGFSSG*CRSNSF
Trigger: GAAAGAGTTTGATCTGCAGCACCCAGAAGAGAAGCC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCTGATTAGGTCAAGATaGTCTGGTAGGGACATTCTT +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALLIRSR*SGRDIL
Trigger: AAGAATGTCCCTACCAGAGCATCTTGACCTAATCAG...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCTACTGCTATGGACCTaGTGGGAGAAGATCTTCATA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQLLLWT*WEKIFI
Trigger: TATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAATATAGAGTGCCAGGATaGTCCAGGCATTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEYRVPG*SRHSHH
Trigger: ATGGTGGGAATGCCTGGAGCATCCTGGCACTCTATA...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCTAGACCCTGTTTATTaGTGGACAGGCTCCATAATA +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALLDPVY*WTGSII
Trigger: TATTATGGAGCCTGTCCAGCAATAAACAGGGTCTAG...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAATGCAAGCCATGCTTaGTCACTGGGAGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSNASHA*SLGGGM
Trigger: CATTCCTCCTCCCAGTGAGCAAGCATGGCTTGCATT...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAAGAATCTGTTTAGGTaGCTCTTCCCCTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNKNLFR*LFPCAR
Trigger: TCTGGCACAGGGGAAGAGGCACCTAAACAGATTCTT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR GCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGTTGAGCTAACCACCTaGACTGATCCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSVELTT*TDPPWR
Trigger: CCGCCATGGGGGATCAGTGCAGGTGGTTAGCTCAAC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp TGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGGAGGCAGATTATCTCTaGGCAAACTTAGCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CSYWMAGSMLGNCTQVTREADYL*ANLAPS
Trigger: TGAAGGGGCTAAGTTTGCGCAGAGATAATCTGCCTC...CCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp GGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGAGCATGTTAGGAAACTaGACGCAGGTCACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSMLGNCTQVTRRQIISASMLGN*TQVTRR
Trigger: CCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCT...CGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: GLQPSETLGMRYWSAGWAFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...AGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTALHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTACTGCCAGGCACACCTaGGATACGGAGAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLTARHT*DTEKVL
Trigger: AAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACTGAGAATGTCCTCTaGACCCATGTTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSTENVL*THVLSE
Trigger: TTCAGAGAGAACATGGGTCCAGAGGACATTCTCAGT...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCTAGTTGGAAGTCCCTaGCAGCATGGGAAACAATTT +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQLVGSP*QHGKQF
Trigger: AAATTGTTTCCCATGCTGCCAGGGACTTCCAACTAG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCAGTCTCCTTTTCCCTaGAATGTTCCAGCACCAAAC +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNQSPFP*NVPAPN
Trigger: GTTTGGTGCTGGAACATTCCAGGGAAAAGGAGACTG...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGTATTCACAGTCCTTGTaGGGAAGGGGTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQYSQSL*GRGVIL
Trigger: CAATATCACACCCCTTCCCCACAAGGACTGTGAATA...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGATGGTCACCTTTTCTaGCTGATGGACAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEDGHLF*LMDRDC
Trigger: ACAGTCCCTGTCCATCAGCCAGAAAAGGTGACCATC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGGAGAAGACGTTTTCTTaGCTGCCATGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGREKTFS*LPWKFS
Trigger: TGAGAACTTCCATGGCAGCCAAGAAAACGTCTTCTC...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGGGTTTAAATGTGAAATaGAAGAGGTGGCTGGAACAC +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALGLNVK*KRWLEH
Trigger: GTGTTCCAGCCACCTCTTCCATTTCACATTTAAACC...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGGCAACTCAATGGGAATaGAGAGCTGGTTTAAATGTG +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQATQWE*RAGLNV
Trigger: CACATTTAAACCAGCTCTCCATTCCCATTGAGTTGC...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGACAGCTGTCCTCTTGTaGGTGTTACTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRTAVLL*VLLEWL
Trigger: CAGCCATTCCAGTAACACCCACAAGAGGACAGCTGT...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGTGGTTCCCAGCAGCTTaGGCTGGGTCTTTATGGAAG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLWFPAA*AGSLWK
Trigger: CTTCCATAAAGACCCAGCCCAAGCTGCTGGGAACCA...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCTCTGCTTGATAAAATaGGGCTCATTCCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQLCLIK*GSFLKP
Trigger: TGGCTTTAGGAATGAGCCCCATTTTATCAAGCAGAG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp CTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGCGCACTGAGCTCTATGTaGAGCTGTGGCCATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LACFKAPLRVKVPEMRRGALSSM*SCGHPV
Trigger: CACAGGATGGCCACAGCTCCACATAGAGCTCAGTGC...GCCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp ACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTCACGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TAIPVLTDGPRNVSEGSHAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...GTGAGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGTGTGAGGTTGGAAGGTaGGAACAGTGTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRCEVGR*EQCLRK
Trigger: CTTCCTAAGACACTGTTCTCACCTTCCAACCTCACA...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAGTGCGTAGAGCAACTTaGCCAACTCTTACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPVRRAT*PTLTAE
Trigger: CTCTGCAGTAAGAGTTGGTCAAGTTGCTCTACGCAC...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAAACGAAAGTTCCTCTaGGAAGACGTTTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYKRKFL*EDVFLA
Trigger: AGCCAAGAAAACGTCTTCTCAGAGGAACTTTCGTTT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAAAAAAGGGTGCAAACTaGGTCCTTTCCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEKKGAN*VLSSPN
Trigger: GTTTGGGGAGGAAAGGACTCAGTTTGCACCCTTTTT...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCCATCCCAGTTCTCACTaGTGGTCCCCGAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGHPSSH*WSPKCK
Trigger: CTTACATTTCGGGGACCATCAGTGAGAACTGGGATG...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCATCTGATGATACATTCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGRRVNQAALWASSGGTASDDTF*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGAATGTATCATCAGA...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp AACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGATGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: NDLYFRFTAIPVLTDGPRWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...TCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAAAGAGGAAACCATACTaGCAGGCACACCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPKRKPY*QAHLGY
Trigger: GTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGGCCAGCTGGGATGAATaGTGCACAGGCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMASWDE*CTGTEE
Trigger: TTCCTCTGTGCCTGTGCAGCATTCATCCCAGCTGGC...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACTTGACCAACTCTTACTaGAGAGACACAAGTGATACC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYLTNSY*RDTSDT
Trigger: GGTATCACTTGTGTCTCTGCAGTAAGAGTTGGTCAA...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGTTGACCAACTCTTACTaGAGAGACACAAGTGATACC +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQLTNSY*RDTSDT
Trigger: GGTATCACTTGTGTCTCTGCAGTAAGAGTTGGTCAA...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGAAAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: LQPSETLGMRYWSAGWAEKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTACTGCCAGGCACACCTaGGATACGGAGAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSTARHT*DTEKVL
Trigger: AAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCATGTTCTCTCTGAATaGCTTGGCCGGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTHVLSE*LGRPHP
Trigger: GGGATGGGGCCGGCCAAGCCATTCAGAGAGAACATG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGACATGGCTATCTAGTTaGAAGTCCCTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLTWLSS*KSLAAW
Trigger: CCATGCTGCCAGGGACTTCCAACTAGATAGCCATGT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCACCAGGACGTCACATaGCTATCTAGTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPHQDVT*LSSWKS
Trigger: GGACTTCCAACTAGATAGCCATGTGACGTCCTGGTG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGGTCCCTCTGGCAGGTaGAAGGCAGGTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRGPSGR*KAGSLS
Trigger: GGACAGTGAACCTGCCTTCCACCTGCCAGAGGGACC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCTGCTATGGACCTGCTaGGAGAAGATCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSLLWTC*EKIFIS
Trigger: GCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAG...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCTGCAAAAGCAAGAACCCGAGAGATAAGTGCCTGTCACTTACGTGGCCACTAAGCCTACTGCTATaGACCTGCTGGGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: GVCKSKNPRDKCLSLTWPLSLLL*TCWEKI
Trigger: GATCTTCTCCCAGCAGGTCCATAGCAGTAGGCTTAG...TGGCCACGTAAGTGACAGGCACTTATCTCTCGGGTTCTTGCTTTTGCAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAAAACTACAGAGCAAGTaGATGGGTGGGGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPKLQSK*MGGDSQ
Trigger: CTGACTGTCCCCACCCATCCACTTGCTCTGTAGTTT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGTCATGAGTGCACACTaGCTGTCAGGATACTCTATC +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSVMSAH*LSGYSI
Trigger: GATAGAGTATCCTGACAGCCAGTGTGCACTCATGAC...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCCTATCAACCCCTCATaGGAAAGACTAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLPINPS*ERLGVS
Trigger: AGAGACTCCTAGTCTTTCCCATGAGGGGTTGATAGG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTTGGGTGTTACTGGAATaGCTGCACCACACCCCCACT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSWVLLE*LHHTPT
Trigger: AGTGGGGGTGTGGTGCAGCCATTCCAGTAACACCCA...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLLGMRY*SAGWAE
Trigger: TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAA...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp GCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCTTGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: AGSMLGNCTQVTRRQIISCLCSY*MAGSML
Trigger: TAACATGCTGCCTGCCATCCAGTAGGAGCACAGACA...AGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGTGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLYFRFTAIPVLTDGPRNLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...ATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTCACTCCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: AIPVLTDGPRNVSEGSHSRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GGAGTGAGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGACCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTCAAACTCTTTCCACTaGGAATGTCCTCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPSNSFH*ECPLDP
Trigger: TGGGTCCAGAGGACATTCTCAGTGGAAAGAGTTTGA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGTTTCAAACTGTAAGCTaGTTAGGTCAAGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQFQTVS*LGQDAL
Trigger: CAGAGCATCTTGACCTAATCAGCTTACAGTTTGAAA...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGTGGAAGGAGTCCAATTaGGAAGATAATTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQWKESN*EDNFRP
Trigger: AGGTCTGAAATTATCTTCTCAATTGGACTCCTTCCA...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGCTGTCACCGCTGGAATaGGGAGTCATTGTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLLSPLE*GVIVWL
Trigger: TAACCAAACAATGACTCCTCATTCCAGCGGTGACAG...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAACCTCAAACCAGAGGTaGAGACTTCTATGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPTSNQR*RLLWST
Trigger: TGTGGACCATAGAAGTCTTCACCTCTGGTTTGAGGT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTGTGAGGTTGGAAGGTaGGAACAGTGTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPCEVGR*EQCLRK
Trigger: CTTCCTAAGACACTGTTCTCACCTTCCAACCTCACA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGACCTTAATATGGTTCTaGCACTGGAGACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQTLIWF*HWRQCC
Trigger: ACAACATTGTCTCCAGTGTCAGAACCATATTAAGGT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCACTTGTTTAACCTCTaGGAATACTCAGGAACACAT +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQHLFNL*EYSGTH
Trigger: ATGTGTTCCTGAGTATTCTCAGAGGTTAAACAAGTG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGATCTTGCTCATATGTaGCTTTTGTCCAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYDLAHM*LLSRRI
Trigger: GATTCTTCTGGACAAAAGTCACATATGAGCAAGATC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR TCA 90 bp GATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: DGRQHVRKLHAGHKEADYSTSKP*ASVRTK
Trigger: TTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGA...ATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGAGACCTTGGCTGCACTaGTCCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLRPWLH*SPMAVC
Trigger: GCAGACCGCCATGGGGGATCAGTGCAGCCAAGGTCT...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLELVQQC*KAQMRR
Trigger: CCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAG...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR GCA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCTTCCCTCCTTTTAAATaGGGCCCCATATACTGCATC +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGFPPFK*GPIYCI
Trigger: GATGCAGTATATGGGGCCGCATTTAAAAGGAGGGAA...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGACGTTTTCTTGGCTaGCATGGAAGTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSRRFLG*HGSSHF
Trigger: AAAATGAGAACTTCCATGGCAGCCAAGAAAACGTCT...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATGTTACTGGAATGGCTaGACCACACCCCCACTTATT +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPCYWNG*TTPPLI
Trigger: AATAAGTGGGGGTGTGGTGCAGCCATTCCAGTAACA...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGTTGAGCTAACCACCTaGACTGATCCCCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRVELTT*TDPPWR
Trigger: CCGCCATGGGGGATCAGTGCAGGTGGTTAGCTCAAC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR GCA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTTGCATGTGTAGCTaGTTCTGCCACCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGSCMCS*FCHLVS
Trigger: TGAAACCAGGTGGCAGAAGCAGCTACACATGCAAGA...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGAACATCTTGTAACCTaGTCCAGCAGTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSEHLVT*SSSAAR
Trigger: CCTTGCAGCACTGCTGGACCAGGTTACAAGATGTTC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634654.1
CDS-3UTR CCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTGGGATCATCAACATTCAGCTCTCCATTGGTTGAGCTAACCACCTGCACTGATTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VGSSTFSSPLVELTTCTDWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...ATCAGTGCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCATTGTCCTACTACCTaGAGAAAAGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALHCPTT*RKEFVK
Trigger: TTTGACAAACTCTTTTCTCCAGGTAGTAGGACAATG...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGCTCATCTCATGTTCTaGAGAGCTAGGTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCAHLMF*RARFSN
Trigger: GTTTGAAAACCTAGCTCTCCAGAACATGAGATGAGC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGAAGTCCCTGGCAGCATaGGAAACAATTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQKSLAA*ETISIF
Trigger: AAAAATTGAAATTGTTTCCCATGCTGCCAGGGACTT...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCACTGCTATGGACCTGCTaGGAGAAGATCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPLLWTC*EKIFIS
Trigger: GCTTATGAAGATCTTCTCCCAGCAGGTCCATAGCAG...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTAGCCACTGTGCTCCATaGTTAGCTCTCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSSHCAP*LALYSQ
Trigger: CTGGGAGTAGAGAGCTAACCATGGAGCACAGTGGCT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGACCATACTTGTGAAATaGAGAAAGCTCAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: RRVNQAALWASSGGTAALTILVK*RKLRNY
Trigger: GTAGTTTCTGAGCTTTCTCCATTTCACAAGTATGGT...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACATTTGTGTTTTCCATaGTGCCCTAGGAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEHLCFP*CPRKWA
Trigger: AGCCCATTTCCTAGGGCACCATGGAAAACACAAATG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTGGTCTCAATCTTAGGTaGACATCTTGTAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLGLNLR*TSCNLV
Trigger: GACCAGGTTACAAGATGTTCACCTAAGATTGAGACC...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634654.1
CDS-3UTR TCA 90 bp TTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCCGGTCTCAATCTTAGGTaGACATCTTGTAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: FPTWSKVIHLWETFTCTAGLNLR*TSCNLV
Trigger: GACCAGGTTACAAGATGTTCACCTAAGATTGAGACC...GGCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGTGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGTTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATTAATGTGTCAGCCTTaGGTCCTTGCCAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRLMCQP*VLARGG
Trigger: GCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FRFTAIPVLTDGPRNVSEAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...TTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGGCGGAGATGGCCAATaGCCCACTAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQGGDGQ*PTRPWL
Trigger: CAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCTATAATGCCACACCCTaGGGTCCCTCTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KETINMSRNLRISAVICSYNATP*GPSGRW
Trigger: CCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATA...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGGTCCAATGGAACAGATaGAGCCCAGTACCTCTGATC +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMVQWNR*SPVPLI
Trigger: GATCAGAGGTACTGGGCTTCATCTGTTCCATTGGAC...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTACTGAAAATCAACACTaGATATGCACTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSTENQH*ICTTSI
Trigger: TATGCTGGTAGTGCATATTCAGTGTTGATTTTCAGT...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGACTGAAAATCAACACTaGATATGCACTACCAGCATA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQTENQH*ICTTSI
Trigger: TATGCTGGTAGTGCATATTCAGTGTTGATTTTCAGT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATGGCTCATCTTTCCTaGGACATTCCTAATAGACTG +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSMAHLS*DIPNRL
Trigger: CAGTCTATTAGGAATGTCTCAGGAAAGATGAGCCAT...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR TCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGCGGTCTGCAGCCAAGTaGGACGTTAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMRSAAK*DVRYEV
Trigger: TACCTCATACCTAACGTCTCACTTGGCTGCAGACCG...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGGTCTCAATCTTAGGTaGACATCTTGTAACCCATTC +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEGLNLR*TSCNPF
Trigger: GAATGGGTTACAAGATGTTCACCTAAGATTGAGACC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR TCA 90 bp TGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGCAGTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: CLFQSSSQSKGPRNEEGQSTSKP*ASVRTK
Trigger: TTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGA...CTGCCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCTATTGGTTCCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCYWFLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGAACCAATA...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCTGGTCCAGCAGTaGTGCAAGGCGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRNLVQQ*CKAQMR
Trigger: CCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGTT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR GCA 90 bp GGTTCTTTGAGTGCACGTATTCCATTCGAGAAAGCAGCTGGATGGCTATCATTAAACCTGGTCCAGCAGTaGTGCAAGGCGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: GSLSARIPFEKAAGWLSLNLVQQ*CKAQMR
Trigger: CCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGTT...TAATGATAGCCATCCAGCTGCTTTCTCGAATGGAATACGTGCACTCAAAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TGGATGGCAGGCAGCATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: WMAGSMLGNCTQVTRRQIAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...AATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCTGCCTGCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTTCCCTCCTTTTAAATaGGGCCCCATATACTGCATC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPFPPFK*GPIYCI
Trigger: GATGCAGTATATGGGGCCGCATTTAAAAGGAGGGAA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTC +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMPLSQK*TGLTTV
Trigger: GACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGG...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp ACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTCACATGTGTAGCTGCTTCTaGCACCTGGTTTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TAIPVLTDGPRNVSEGSHMCSCF*HLVSFP
Trigger: TGGAAATGAAACCAGGTGGCAGAAGCAGCTACACAT...GTGAGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGACCCACCCGCAGCGGTaGTTTCTCTCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLETHPQR*FLSFPG
Trigger: TCCTGGGAAAGAGAGAAACCACCGCTGCGGGTGGGT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR CCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSPSNEK*QELQVQ
Trigger: TTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCCCTATGGGCAAGCAGTaGAGGAACAGCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KETINMSRNLRISAVICSPMGKQ*RNSSSG
Trigger: CCCAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGG...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCATTGTCCTACTACCTaGAGAAAAGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSHCPTT*RKEFVK
Trigger: TTTGACAAACTCTTTTCTCCAGGTAGTAGGACAATG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTACTGAGAATGTCCTCTaGACCCATGTTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLTENVL*THVLSE
Trigger: TTCAGAGAGAACATGGGTCCAGAGGACATTCTCAGT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGTTTGGCTTCTCTTCTaGGTGCTGCAGATCAAACTC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQVWLLF*VLQIKL
Trigger: GAGTTTGATCTGCAGCACCCAGAAGAGAAGCCAAAC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCACCAGGACGTCACATaGCTATCTAGTTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSHQDVT*LSSWKS
Trigger: GGACTTCCAACTAGATAGCCATGTGACGTCCTGGTG...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTCTCTTCTGTCACCGCTaGAATGAGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLLFCHR*NEESLF
Trigger: AAACAATGACTCCTCATTCCAGCGGTGACAGAAGAG...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGGACCATTTATGCCTTaGTGGAGTCTTGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSGPFMP*WSLGLC
Trigger: ACACAGGCCAAGACTCCACCAAGGCATAAATGGTCC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGGGAGGCATGTGGGCTTaGGAGATGCATCAAACGAAA +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMGGMWA*EMHQTK
Trigger: TTTCGTTTGATGCATCTCCCAAGCCCACATGCCTCC...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMLGMRY*SAGWAE
Trigger: TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAA...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CCA 90 bp ACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAAAGGGGCCTCACTGCTaGACAAAACACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TIFISGSLPSQFSLMVPEKGPHC*TKHSAC
Trigger: ACAAGCAGAGTGTTTTGTCCAGCAGTGAGGCCCCTT...TTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp TTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTGCTGCTTCTGCCACCTaGTTTCATTTCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: FTAIPVLTDGPRNVSEGSAASAT*FHFQHI
Trigger: AATGTGCTGGAAATGAAACCAGGTGGCAGAAGCAGC...AGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp GTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGCAAACTTATGTCTGTGCTCCTACTaGATGGCAGGCAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: VRKLHAGHKEADYLCANLCLCSY*MAGSML
Trigger: TAACATGCTGCCTGCCATCCAGTAGGAGCACAGACA...TAAGTTTGCGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGGTCTCAATCTTAGGTaGACATCTTGTAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSGLNLR*TSCNLV
Trigger: GACCAGGTTACAAGATGTTCACCTAAGATTGAGACC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000634654.1
CDS-3UTR TCA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAATGTTCGGTCACAGAGGTCAAACAAGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKNPRGR*GARWSR
Trigger: TCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTT...CTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTQLSIG*ANHLIS
Trigger: CGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000561349.6
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCAGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGGAGAATAGCAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTGCTATTCTC...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAATTTCAAACTGTAAGCTaGTTAGGTCAAGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEFQTVS*LGQDAL
Trigger: CAGAGCATCTTGACCTAATCAGCTTACAGTTTGAAA...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGGAAGCCCAGTACCTCTaGTCCATGTTAATGTTATTT +
Preference number: 4 (lower is better)
Translates to: SDKAGQPKCYSSAIGADREAQYL*SMLMLF
Trigger: AAATAACATTAACATGGATCAGAGGTACTGGGCTTC...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCACTAGTAAGAGATTTGTaGGGTTGGAAGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPLVRDL*GWKVRT
Trigger: TGTTCTCACCTTCCAACCTCACAAATCTCTTACTAG...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGTGCAGGCTCCCAATCTaGGAAACGAACCTTAATATG +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWCRLPI*ETNLNM
Trigger: CATATTAAGGTTCGTTTCTCAGATTGGGAGCCTGCA...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTCCCCGAAATGTAAGTaGAGGCTCTCACTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMSPKCK*RLSLLS
Trigger: TGACAGGAGTGAGAGCCTTCACTTACATTTCGGGGA...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCATCCCAGTTCTCACTaGTGGTCCCCGAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: FNDLYFRFTAIPVLTDGPHPSSH*WSPKCK
Trigger: CTTACATTTCGGGGACCATCAGTGAGAACTGGGATG...GGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATAACCTGGTCCAGCAGTaGTGCAAGGCGCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHNLVQQ*CKAQMR
Trigger: CCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGTT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGGTCGAGAGCAGTGTaGACTCCTTTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: IISPALLFAKMRVDRHISWSRAV*TPLCHG
Trigger: CCCATGGCACAAAGGAGTGCACACTGCTCTCGACCA...AGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR GCA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: STLPQRGVPSNEKWQELQWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGAATGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: LQPSETLGMRYWSAGWAECSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR GCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCAGTCAGCGAGTGCATaGCCTAACCCCAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHQSASA*PNPKDL
Trigger: CAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTGAGAAATGCAAGCCATaGTTGCTCACTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLEKCKP*LLTGRR
Trigger: CCTCCTCCCAGTGAGCAAGCATGGCTTGCATTTCTC...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAATGTTCGGTCACAGAGGTCAAACAAGACCCACCCGCAGCGGTaGTTTCTCTCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKTHPQR*FLSFPG
Trigger: TCCTGGGAAAGAGAGAAACCACCGCTGCGGGTGGGT...CTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGAACATCTTGTAACCTaGTCCAGCAGTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTEHLVT*SSSAAR
Trigger: CCTTGCAGCACTGCTGGACCAGGTTACAAGATGTTC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCGGCATGAGCTGTGATTaGTGCATTGGAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVGMSCD*CIGVGS
Trigger: GGAGCCCACTCCAATGCACCAATCACAGCTCATGCC...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCTACAGAGCAAGTGGATaGGTGGGGACAGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KETINMSRNLRISAVICSYRASG*VGTVSE
Trigger: CTCGCTGACTGTCCCCACCCATCCACTTGCTCTGTA...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACATGGGAATGGAGAGCTaGTTTAAATGTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNMGMES*FKCEME
Trigger: TTCCATTTCACATTTAAACCAGCTCTCCATTCCCAT...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR CCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGAAGGGGCCTCACTGCTaGACAAAACACTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMKGPHC*TKHSAC
Trigger: ACAAGCAGAGTGTTTTGTCCAGCAGTGAGGCCCCTT...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp ACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TIFISGSLPSQFSLMVPEDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...TTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp ATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ISTIFISGSLPSQFSLMVKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...GACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp AGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: SFALACFKAPLRVKVPEMKRLLL*WPIPMC
Trigger: ACACATAGGGATCGGCCATCACAACAGCAGCCTCTT...CATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGTTGAGCTAACCACCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRVELTT*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGGTGGTTAGCTCAAC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000561349.6
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp GACACCTTCACTGTAAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCCAGCTGCTGAGAAGATaGATGAAAATTCAAGTATGT +
Preference number: 4 (lower is better)
Translates to: DTFTVNNGKESQPGSPMGQLLRR*MKIQVC
Trigger: ACATACTTGAATTTTCATTCATCTTCTCAGCAGCTG...GCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCTGCTGAGAAGATaGATGAAAATTCAAGTATGT +
Preference number: 4 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEQLLRR*MKIQVC
Trigger: ACATACTTGAATTTTCATTCATCTTCTCAGCAGCTG...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCAAAAAGGGTGCAAACTaGGTCCTTTCCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTKKGAN*VLSSPN
Trigger: GTTTGGGGAGGAAAGGACTCAGTTTGCACCCTTTTT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTCTGATGATACATTCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQSDDTF*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGAATGTATCATCAGA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp CATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HYISHMVQSNTPVGDLHLVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...CAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TCATCAACATTCAGCTCTCCATTGGTTGAGCTAACCACCTGCACTGATCCCCCAGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: SSTFSSPLVELTTCTDPPDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...TGGGGGATCAGTGCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR GCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCTGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: EEETILPGTPGIRRRFFSCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTCAAGTATGTTTTCTTaGCAACCTGAGTGTTCACTC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPSSMFS*QPECSL
Trigger: GAGTGAACACTCAGGTTGGCAAGAAAACATACTTGA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCTGATTAGGTCAAGATaGTCTGGTAGGGACATTCTT +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWLIRSR*SGRDIL
Trigger: AAGAATGTCCCTACCAGAGCATCTTGACCTAATCAG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp ACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTGTAGCTGCTTCTaGCACCTGGTTTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TIFISGSLPSQFSLMVPEMCSCF*HLVSFP
Trigger: TGGAAATGAAACCAGGTGGCAGAAGCAGCTACACAT...TTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR GCA 90 bp TTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGCATGTTAGGAAACTaGACGCAGGTCACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FALACFKAPLRVKVPEMRSMLGN*TQVTRR
Trigger: CCTCCTTGTGACCTGCGTGCAGTTTCCTAACATGCT...CCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR GCA 90 bp TATTTTCAGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCTGGCCAGGAGGAGTGTaGAATCTCTGTCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YFQFCTCLFQSSSQSKGPWPGGV*NLCLCS
Trigger: GGAGCACAGACAGAGATTGCACACTCCTCCTGGCCA...GGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp CATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGGAACATCTTGTAACCTaGTCCAGCAGTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HYISHMVQSNTPVGDLHLEHLVT*SSSAAR
Trigger: CCTTGCAGCACTGCTGGACCAGGTTACAAGATGTTC...CAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp TCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: STIFISGSLPSQFSLMVPFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...GGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp ACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: TIFISGSLPSQFSLMVPEEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...TTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CCA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTGGAGTGGGCTCCCGTaGGATCATCAACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVWSGLP*DHQHSA
Trigger: AGCTGAATGTTGATGATCCCACGGGAGCCCACTCCA...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACACTCCTGGGAGGCACTaGTCACTTGTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNTPGRH*SLVALS
Trigger: GCTCAGCGCCACAAGTGACCAGTGCCTCCCAGGAGT...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGGGCCTGAGGACTCCTaGGAGGCACTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQGPEDS*EALVTC
Trigger: ACAAGTGACCAGTGCCTCCCAGGAGTCCTCAGGCCC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATACTGCCAGGCACACCTaGGATACGGAGAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHTARHT*DTEKVL
Trigger: AAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCTCTTCTGTCACCGCTaGAATGAGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSLFCHR*NEESLF
Trigger: AAACAATGACTCCTCATTCCAGCGGTGACAGAAGAG...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACCCACCATAGGGCAATaGTGGGGATGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQPTIGQ*WGWWQW
Trigger: CCACTGCCACCATCCCCACCATTGCCCTATGGTGGG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTCTTGTGGGTGTTACTaGAATGGCTGCACCACACCC +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLESCGCY*NGCTTP
Trigger: GGGTGTGGTGCAGCCATTCCAGTAACACCCACAAGA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTGGTGCCCTAGGAAATaGGCTACTCTGAGATCACAT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTWCPRK*ATLRSH
Trigger: ATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp ATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCTATTGGTCTGCCGGCTaGGCTGAATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: ISTIFISGSLPSQFSLMVYWSAG*AEFPTL
Trigger: GAGAGTGGGAAATTCAGCCCAGCCGGCAGACCAATA...GACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRLGMRY*SAGWAE
Trigger: TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR CCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGGCTGCTTCTGCCACCTaGTTTCATTTCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMAASAT*FHFQHI
Trigger: AATGTGCTGGAAATGAAACCAGGTGGCAGAAGCAGC...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp AACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAGTCATCTGGTTAATGTaGACCCAATCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NDLYFRFTAIPVLTDGPRVIWLM*TQSGFS
Trigger: AGAGAAGCCTGATTGGGTCCACATTAACCAGATGAC...TCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp AACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: NDLYFRFTAIPVLTDGPRNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...TCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCGTTGAGCTAACCACCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVVELTT*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGGTGGTTAGCTCAAC...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVQLSIG*ANHLIS
Trigger: CGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCCTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNPRHEL*LVHWSG
Trigger: CCCACTCCAATGCACCAATCACAGCTCATGCCGAGG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGACCTCCACCTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAGGTGGAGGT...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATTTACCCCCAGCCTCTTaGTCTCCTTCTGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHLPPAS*SPSADK
Trigger: TTTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAA...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTTGGAAGGAGTCCAATTaGGAAGATAATTTCAGACCT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSWKESN*EDNFRP
Trigger: AGGTCTGAAATTATCTTCTCAATTGGACTCCTTCCA...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGCCACTAAACTCAAATaGAAATTGGGCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSATKLK*KLGMRR
Trigger: TCTTCTCATGCCCAATTTTCATTTGAGTTTAGTGGC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTTTTTCCCTTGAAAGGTaGTTTACAAATACCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLFSLER*FTNTGS
Trigger: ACTTCCGGTATTTGTAAATCACCTTTCAAGGGAAAA...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp CCAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTCCCCGAAATGTAAGTaGAGGCTCTCACTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PVLFQRSLFQVHCHPSSHSPKCK*RLSLLS
Trigger: TGACAGGAGTGAGAGCCTTCACTTACATTTCGGGGA...GTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTTCTGATGATACATTCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSSDDTF*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGAATGTATCATCAGA...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR TCA 90 bp ATGGCTACTATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCATGAGAAATCCAGTCTaGGACGAGCAGCACACAGAG +
Preference number: 4 (lower is better)
Translates to: MATIHCSPDNMILSVHYVMRNPV*DEQHTE
Trigger: CTCTGTGTGCTGCTCGTCTCAGACTGGATTTCTCAT...GACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGATAGTAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR GCA 90 bp ATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: IISPALLFAKMRVDRHISVCTPL*HGFSCP
Trigger: CGGACAACTAAACCCATGGCACAAAGGAGTGCACAC...AGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: IIFPTWSKVIHLWETFTCWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...GCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp AAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCATGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: KRKPYCQAHLGYGEGSSPCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...TGGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATTGCGGCCCCATATACTaGATCCTAAGCCTACTGCTA +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHCGPIY*ILSLLL
Trigger: TAGCAGTAGGCTTAGGATGCAGTATATGGGGCCGCA...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGACTTCCCTGGAGTCTaGAAAAGCAAGAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEDFPGV*KSKNPR
Trigger: TCTCGGGTTCTTGCTTTTGCAGACTCCAGGGAAGTC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTTGTGTTTTCCATGGTaGCCTAGGAAATGGGCTACT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLCFPW*PRKWAT
Trigger: AGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ATTTTCAGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCATGCAATCTCTGTCTGTaGTCCTACTGGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IFSFALACFKAPLRVKVPCNLCL*SYWMAG
Trigger: GCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCA...TGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCATTTGTGTTTTCCATaGTGCCCTAGGAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTHLCFP*CPRKWA
Trigger: AGCCCATTTCCTAGGGCACCATGGAAAACACAAATG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp AACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGATTATTCCTGTTTATGTaGGTGCTGGGAAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NDLYFRFTAIPVLTDGPRLFLFM*VLGSGK
Trigger: TTTCCCACTTCCCAGCACCCACATAAACAGGAATAA...TCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGGTCTCAATCTTAGGTaGACATCTTGTAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRGLNLR*TSCNLV
Trigger: GACCAGGTTACAAGATGTTCACCTAAGATTGAGACC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000607537.6
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTTGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GGTTCTTTGAGTGCACGTATTCCATTCGAGAAAGCAGCTGGATGGCTATCATTAGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSLSARIPFEKAAGWLSLDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...TAATGATAGCCATCCAGCTGCTTTCTCGAATGGAATACGTGCACTCAAAGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp CAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTAGAAGTCCAGTCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSYFNDLYFRFTAIPVLTRSPVA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGACTGGACTTCT...AGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: DLYFRFTAIPVLTDGPRNFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...ATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: FALACFKAPLRVKVPEMRRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...CCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS-3UTR TCA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTAAAGGAATCCCAATTTaGTTCCTATCAACCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSKGIPI*FLSTPH
Trigger: ATGAGGGGTTGATAGGAATCAAATTGGGATTCCTTT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTAGACCTTATAGATGGTaGTGGCACTGGGAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLRPYRW*WHWESD
Trigger: ATCACTTTCCCAGTGCCATCACCATCTATAAGGTCT...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGGAAATGGGCTACTCTaGGATCACATATCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHGNGLL*DHISEP
Trigger: GGGTTCTGATATGTGATCTCAGAGTAGCCCATTTCC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGAAATGGGCTACTCTaGGATCACATATCAGAACCC +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEGNGLL*DHISEP
Trigger: GGGTTCTGATATGTGATCTCAGAGTAGCCCATTTCC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATAAAAAGGGTGCAAACTaGGTCCTTTCCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHKKGAN*VLSSPN
Trigger: GTTTGGGGAGGAAAGGACTCAGTTTGCACCCTTTTT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTCTGATGATACATTCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMSDDTF*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGAATGTATCATCAGA...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: YFRFTAIPVLTDGPRNVSISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...ACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGATGAGCTGTGATTGGTaGATTGGAGTGGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMMSCDW*IGVGSR
Trigger: ACGGGAGCCCACTCCAATGCACCAATCACAGCTCAT...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGACTACTGCTATGGACCTaGTGGGAGAAGATCTTCATA +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRLLLWT*WEKIFI
Trigger: TATGAAGATCTTCTCCCAGCAGGTCCATAGCAGTAG...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR GCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACAGTCAGCGAGTGCATaGCCTAACCCCAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQQSASA*PNPKDL
Trigger: CAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: IIFPTWSKVIHLWETFTCFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...GCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIREKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp GGTTCTTTGAGTGCACGTATTCCATTCGAGAAAGCAGCTGGATGGCTATCATTAGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: GSLSARIPFEKAAGWLSLEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...TAATGATAGCCATCCAGCTGCTTTCTCGAATGGAATACGTGCACTCAAAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635324.1
ENST00000635529.1
CDS-3UTR CCA 90 bp TGGCATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: WHYISHMVQSNTPVGDLHEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...GTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp GTGGGATCATCAACATTCAGCTCTCCATTGGTTGAGCTAACCACCTGCACTGATCTGTTTTCTTCTTTTTaGTTTGGATATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VGSSTFSSPLVELTTCTDLFSSF*FGYPPS
Trigger: GGAGGGTGGATATCCAAACCAAAAAGAAGAAAACAG...ATCAGTGCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGCTTCACTGTAAACAATaGGAAGGAGAGTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRLHCKQ*EGESTR
Trigger: CCTGGTTGACTCTCCTTCCCATTGTTTACAGTGAAG...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTAAGTCCCTGGCAGCATaGGAAACAATTTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSKSLAA*ETISIF
Trigger: AAAAATTGAAATTGTTTCCCATGCTGCCAGGGACTT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTCTAGTTGGAAGTCCCTaGCAGCATGGGAAACAATTT +
Preference number: 4 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLLVGSP*QHGKQF
Trigger: AAATTGTTTCCCATGCTGCCAGGGACTTCCAACTAG...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCTGGTGCCCTAGGAAATaGGCTACTCTGAGATCACAT +
Preference number: 4 (lower is better)
Translates to: KETINMSRNLRISAVICSWCPRK*ATLRSH
Trigger: ATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCA...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTGGTGCCCTAGGAAATaGGCTACTCTGAGATCACAT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEWCPRK*ATLRSH
Trigger: ATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGACATTTGTGTTTTCCATaGTGCCCTAGGAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRHLCFP*CPRKWA
Trigger: AGCCCATTTCCTAGGGCACCATGGAAAACACAAATG...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGTTAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLLGMRY*SAGWAE
Trigger: TTCAGCCCAGCCGGCAGACCAATACCTCATACCTAA...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS-3UTR CCA 90 bp CTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGAGCCAAAAGTGCACTaGCCTCACAACTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LISTIFISGSLPSQFSLMEPKVH*PHNCPH
Trigger: ATGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTC...CATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp TTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAATGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: FRFTAIPVLTDGPRNVSECISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...TTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCAATCTGTACTCTAAATaGAGCTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: IIFPTWSKVIHLWETFTCNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAGCTTCATTTAGAGTACAGATT...GCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLERIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGGCACCAGAATCTACGTaGACTGACCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMAPEST*TDPTGV
Trigger: TACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGC...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTGTTAAAGACCTTGGCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGVKDLG*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGCCAAGGTCTTTAAC...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp ATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCAAGCTGTGGAGCACGTaGTTTTATTGGTTCCTAATC +
Preference number: 4 (lower is better)
Translates to: IIFPTWSKVIHLWETFTCKLWST*FYWFLI
Trigger: GATTAGGAACCAATAAAATCACGTGCTCCACAGCTT...GCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp CCATGGCATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: PWHYISHMVQSNTPVGDLDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...AAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGTGGGAGACCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLWETFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGTCTCCCA...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTTGTGTTTTCCATGGTaGCCTAGGAAATGGGCTACT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLELCFPW*PRKWAT
Trigger: AGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: KETINMSRNLRISAVICSFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAGAAAGCAGCTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEEKAAG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGCTGCTTTCTC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLERSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACATTGGTGCATTGGAGTaGGCTCCCGTGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNIGALE*APVGSS
Trigger: TGATGATCCCACGGGAGCCCACTCCAATGCACCAAT...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACAGCCACTGTGCTCCATaGTTAGCTCTCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNSHCAP*LALYSQ
Trigger: CTGGGAGTAGAGAGCTAACCATGGAGCACAGTGGCT...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGTTTAAGACTGCTTGCTaGACAAAAGACTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQFKTAC*TKDFQD
Trigger: ATCTTGAAAGTCTTTTGTCCAGCAAGCAGTCTTAAA...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACGTCACCTTTTCTGGCTaGTGGACAGGGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNVTFSG*WTGTVF
Trigger: GAAAACAGTCCCTGTCCATCAGCCAGAAAAGGTGAC...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAAATAATCCTCTGCTCTaGGACCTTATAGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRNNPLL*DLIDGD
Trigger: ATCACCATCTATAAGGTCTCAGAGCAGAGGATTATT...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCAGTGCCAGGGTTTATaGAACATTATACATTTAGCT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTQCQGL*NIIHLA
Trigger: AGCTAAATGTATAATGTTTCATAAACCCTGGCACTG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTCTGATGATACATTCTaGTTTCGAAGAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLESDDTF*FRRGCC
Trigger: ACAGCAGCCTCTTCGAAATCAGAATGTATCATCAGA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp ATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: IFISGSLPSQFSLMVPEMCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...CATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp CTCTTTCTTATTGCCTTGTCGACCAATCAGGAAGTTCTCTGGCTTGACATCTCGTGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: LFLIALSTNQEVLWLDISCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...CGAGATGTCAAGCCAGAGAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGCTAGACCCTGTTTATTaGTGGACAGGCTCCATAATA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLELDPVY*WTGSII
Trigger: TATTATGGAGCCTGTCCAGCAATAAACAGGGTCTAG...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp TATAACATGCTCTTTCTTATTGCCTTGTCGACCAATCAGGAAGTTCTCTGGCTTTTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: YNMLFLIALSTNQEVLWLFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...AAGCCAGAGAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATGTTATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CCA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CCA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAATGTTCGGTCACAGAGGTCAAACAAGAAAGTAATACACCTGTaGGAGACCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKKVIHL*ETFTCT
Trigger: AGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTT...CTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATATTCGAGAAAGCAGCTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHIRESS*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGCTGCTTTCTCGAAT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CCA 90 bp CAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: QSYFNDLYFRFTAIPVLTRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...AGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp ATTTTCAGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCACGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: IFSFALACFKAPLRVKVPRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...TGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp TATTTTCAGTTTTGCACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: YFQFCTCLFQSSSQSKGPRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...GGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGCTCATCTCATGTTCTaGAGAGCTAGGTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEAHLMF*RARFSN
Trigger: GTTTGAAAACCTAGCTCTCCAGAACATGAGATGAGC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACTAACCCCAAGGATCTaGCTGAGGCATACAGCTAAG +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQLTPRI*LRHTAK
Trigger: CTTAGCTGTATGCCTCAGCCAGATCCTTGGGGTTAG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACAAACTACAGAGCAAGTaGATGGGTGGGGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNKLQSK*MGGDSQ
Trigger: CTGACTGTCCCCACCCATCCACTTGCTCTGTAGTTT...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp ATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCTTATTCCTGTTTATGTaGGTGCTGGGAAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ISTIFISGSLPSQFSLMVLFLFM*VLGSGK
Trigger: TTTCCCACTTCCCAGCACCCACATAAACAGGAATAA...GACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGCTCACTCCTGTCATCTaGTTAATGTGGACCCAATCA +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLLTPVI*LMWTQS
Trigger: TGATTGGGTCCACATTAACCAGATGACAGGAGTGAG...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp CAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTCTCACTCCTGTCATCTaGTTAATGTGGACCCAATCA +
Preference number: 4 (lower is better)
Translates to: QSYFNDLYFRFTAIPVLTLTPVI*LMWTQS
Trigger: TGATTGGGTCCACATTAACCAGATGACAGGAGTGAG...AGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
3UTR CAA 72 bp TCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTaGATAGACATATATCTTGCAGTTCCAGTTAAACTT +
Preference number: 4 (lower is better)
Translates to: SSLRLCSLPRCV*IDIYLAVPVKL
Trigger: AAGTTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR TCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCTGTATCTCCGGGAGATaGAAAACCATTTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: IIFPTWSKVIHLWETFTCCISGR*KTIYLF
Trigger: GAACAAATAAATGGTTTTTCATCTCCCGGAGATACA...GCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR TCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGAAGCTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAGCTT...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR TCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp TCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SYFNDLYFRFTAIPVLTDRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...ATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMRIYVN*PYWSRN
Trigger: ATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCT...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAAGTGTTCACTCAGAATaGCACCGAGTTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQSVHSE*HRVWLL
Trigger: GAGAAGCCAAACTCGGTGTCATTCTGAGTGAACACT...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR TCA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGGAAGTTCTCATTTTTaGGAAATGCAAGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHGSSHF*EMQAML
Trigger: AAGCATGGCTTGCATTTCTCAAAAATGAGAACTTCC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGCAGTGCCAGGGTTTATaGAACATTATACATTTAGCT +
Preference number: 4 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRQCQGL*NIIHLA
Trigger: AGCTAAATGTATAATGTTTCATAAACCCTGGCACTG...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGGGTCTCAATCTTAGGTaGACATCTTGTAACCCATTC +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLGLNLR*TSCNPF
Trigger: GAATGGGTTACAAGATGTTCACCTAAGATTGAGACC...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGGACCTTCACCTGCACTaGCAAGCTGTTTATAAAATC +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLDLHLH*QAVYKI
Trigger: GATTTTATAAACAGCTTGGCAGTGCAGGTGAAGGTC...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGCATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR GCA 90 bp AGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: SLISTIFISGSLPSQFSLAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR GCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGCTGGTCAGTGCCTTTaGTTTTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQAGQCL*FCVCVC
Trigger: ACACACACACACACAAAAGCAAAGGCACTGACCAGC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCTGGACAAAACACTCTaGTTGTTAAAGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGLDKTL*LLKTLA
Trigger: AGCCAAGGTCTTTAACAAGCAGAGTGTTTTGTCCAG...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CCA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGACACAAATATCTCTCCTaGAGGAACCATTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRHKYLS*RNHFKY
Trigger: GTATTTGAAATGGTTCCTCCAGGAGAGATATTTGTG...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGTTTCAAAGAGGTCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMFQRGL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGACCTCTTTGAAA...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACTAAAGCCAGCTTGCTaGGACACTAATTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQLKPAC*DTNFRS
Trigger: GCTTCTGAAATTAGTGTCTCAGCAAGCTGGCTTTAG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGAGATTTTTCAACCCATaGCTTAAGAGCCCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMRFFNP*LKSPLE
Trigger: TTCAAGGGGGCTCTTAAGTCATGGGTTGAAAAATCT...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR TCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGGTAGCCCTGATAACATaGTTCTTTCGGTTCACTATG +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMVALIT*FFRFTM
Trigger: CATAGTGAACCGAAAGAATCATGTTATCAGGGCTAC...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR GCA 90 bp CAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: QSYFNDLYFRFTAIPVLTMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...AGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAATGTTCGGTCACAGAGGTCAAACAAGATGAGGTTCTTTGAGTaGACGTATTCCATTCGAGAA +
Preference number: 4 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKMRFFE*TYSIRE
Trigger: TTCTCGAATGGAATACGTGCACTCAAAGAACCTCAT...CTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR GCA 90 bp TGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTAAACATGCTCTTTCTTATTaGCTTGTCGACCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: CSLPRCVLIDIYLAVPVKHALSY*LVDQSG
Trigger: TCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATG...TTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR GCA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAATTTTCCCTACTAGGATaGTCCATGATCCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQFSLLG*SMILQD
Trigger: GTCCTGTAGGATCATGGACCATCCTAGTAGGGAAAA...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: VISALCKVHQGNFSRNGNRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACATAGGGATCG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAAGTTAGGGCAACTCAATaGGAATGGAGAGCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQVRATQ*EWRAGL
Trigger: TAAACCAGCTCTCCATTCCCATTGAGTTGCCCTAAC...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CAA 72 bp TATGCACTACCAGCATATCTTCCCACTGAACTAAGTTaGGAAATTACTTTAGGGGTGATGGTCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YALPAYLPTELS*EITLGVMVTFS
Trigger: AGAAAAGGTGACCATCACCCCTAAAGTAATTTCCAAACTTAGTTCAGTGGGAAGATATGCTGGTAGTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR GCA 90 bp ATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: ISTIFISGSLPSQFSLMVWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...GACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR GCA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGTGGTTCCAGTTTGATTaGTACATATTCATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: YFLCREDFPNGAQISLLEWFQFD*YIFIGV
Trigger: TACACCAATGAATATGTAGCAATCAAACTGGAACCA...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR GCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAATGCTCTTTGCCAAGATaGGTGTTGATAGACATATAT +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQCSLPR*VLIDIY
Trigger: ATATATGTCTATCAACACGCATCTTGGCAAAGAGCA...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACATTGTCCTACTACCTaGAGAAAAGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQHCPTT*RKEFVK
Trigger: TTTGACAAACTCTTTTCTCCAGGTAGTAGGACAATG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CCA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACACAAATATCTCTCCTaGAGGAACCATTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQHKYLS*RNHFKY
Trigger: GTATTTGAAATGGTTCCTCCAGGAGAGATATTTGTG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
3UTR CAA 72 bp TGTCTACAGAACGGAGGTTTCTTTGTAACATCAGGTTaGGTAATCAAACTAGAAATACAAGGAATACGTGTT +
Preference number: 4 (lower is better)
Translates to: CLQNGGFFVTSG*VIKLEIQGIRV
Trigger: AACACGTATTCCTTGTATTTCTAGTTTGATTACCAAACCTGATGTTACAAAGAAACCTCCGTTCTGTAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS TCA 90 bp GCCTCACAACTGTCCTCCTGGTCCAGCAGTGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTCCCCGAGGCGCCAAGTGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: ASQLSSWSSSAARRK*GGRGPLPEAPSASL
Trigger: TAGAGAAGCACTTGGCGCCTCGGGGAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGAGGACAGTTGTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS GCA 90 bp AAGGCGCAAATGAGGCGGGCGCGGTCCCCTCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAGCGGTGGTTTCTCTCTTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: KAQMRRARSPPRGAK*FSTHPQRWFLSFPG
Trigger: TCCTGGGAAAGAGAGAAACCACCGCTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGGAGGGGACCGCGCCCGCCTCATTTGCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000607537.6
ENST00000634811.1
ENST00000635529.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCCCCTCTGCCCTCTCTaGAGAGGCAAGGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLPLCPL*RGKAFS
Trigger: AGAAAATGCCTTGCCTCTCAAGAGAGGGCAGAGGGG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS TCA 90 bp GGTGAACATCTTGTAACCTGGTCCAGCAGTGCTGCAAGGCGCAAATaGGGCGGGCGCGGTCCCCTCCCCGAGGCGCCAAGTGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: GEHLVTWSSSAARRK*GGRGPLPEAPSASL
Trigger: TAGAGAAGCACTTGGCGCCTCGGGGAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGTTACAAGATGTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000607537.6
ENST00000634654.1
ENST00000635529.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCTTACCCCCAGCCTCTaGATCTCCTTCTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLTPSL*ISFCRQ
Trigger: TTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAAG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: QSLRQAEMANDPLGPGCPIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...CGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGGGACCATTTATGCCTaGGTGGAGTCTTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHGTIYA*VESWPV
Trigger: CACAGGCCAAGACTCCACCAAGGCATAAATGGTCCC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: MGRRVNQAALWASSGGTAAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS TCA 90 bp GCCAACCCTGAAGTTGGGTCCCACCATAAGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGAGCAGTGTGCACTCCTTTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: ANPEVGSHHKNPRGR*GARWSRAVCTPLCH
Trigger: ATGGCACAAAGGAGTGCACACTGCTCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTTCTTATGGTGGGACCCAACTTCAGGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635359.1
ENST00000635514.1
ENST00000635529.1
CDS-3UTR CAA 90 bp GCGGAGATGGCCAATGACCCACTAGGCCCTGGCTGCCCGCACTGGCCCCTTCTGTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: AEMANDPLGPGCPHWPLLLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...CAGAAGGGGCCAGTGCGGGCAGCCAGGGCCTAGTGGGTCATTGGCCATCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGCCCCTCTGCCCTCTCTaGAGAGGCAAGGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: STLPQRGVPSNEKWQELQPLCPL*RGKAFS
Trigger: AGAAAATGCCTTGCCTCTCAAGAGAGGGCAGAGGGG...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACCCTAGACCCTGTTTATaGCTGGACAGGCTCCATAAT +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHPRPCL*LDRLHN
Trigger: ATTATGGAGCCTGTCCAGCAATAAACAGGGTCTAGG...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp ATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCATTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: MGRRVNQAALWASSGGTALPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...TGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RRVNQAALWASSGGTAALPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: STLPQRGVPSNEKWQELQFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGCTCTGGGACCTGCTCAGAGCCTTAGGCAGGCGGAGATGGCCAATGACCCACGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: QLWDLLRALGRRRWPMTHGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...GTGGGTCATTGGCCATCTCCGCCTGCCTAAGGCTCTGAGCAGGTCCCAGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAGGAGGCATGTGGGCTaGGGAGATGCATCAAACGAA +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYRRHVG*GDASNE
Trigger: TTCGTTTGATGCATCTCCCAAGCCCACATGCCTCCT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: DGWGQSASACPNPKDLAEGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: GLQPSETLGMRYWSAGWATFSSP*VELTTC
Trigger: GCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...AGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CAA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: STLPQRGVPSNEKWQELQTFSSP*VELTTC
Trigger: GCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CAA 90 bp TATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: YPPSPKEESLPMRNGRSCPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...GCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCCTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: EEETILPGTPGIRRRFFSFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...GGAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGTCCCAGAAATGAGGAGGGGCAGACGTCTCCTGCACTGAGCTCTATGTGGAGCGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: GPRNEEGQTSPALSSMWSGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...GCTCCACATAGAGCTCAGTGCAGGAGACGTCTGCCCCTCCTCATTTCTGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CAA 90 bp GTGGGATCATCAACATTCAGCTCTCCATTGGTTGAGCTAACCACCTGCACTGATGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: VGSSTFSSPLVELTTCTDAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...ATCAGTGCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CAA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTGAGCTGCAGGTACAATaGAGTCAGAGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSELQVQ*SQSPQG
Trigger: GCCCTGGGGACTCTGACTCAATTGTACCTGCAGCTC...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCGCTACAGCTCAGCTATaGGGGCAGATAGGATACACC +
Preference number: 5 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLATAQL*GQIGYT
Trigger: GGTGTATCCTATCTGCCCCAATAGCTGAGCTGTAGC...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp AACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACGCTGGTCTCGAACTCTaGACCTCACATGATCCACTT +
Preference number: 5 (lower is better)
Translates to: NNGKESQPGSPMGKQWRNAGLEL*TSHDPL
Trigger: AAGTGGATCATGTGAGGTCAAGAGTTCGAGACCAGC...GTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQGFSCP*SFILFP
Trigger: AGGGAAAAGGATGAAAGACAACGGACAACTAAACCC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGCAGCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: FPGPIMPHPEVPLAGGRQLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...CTGCCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: QWEGESTRQPYGQAVEEQGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...CTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: STLPQRGVPSNEKWQELQGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...CTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTGATAAGGCAGGCCAGCCCAAATGCTACAGCTCAGCTATTGGGGCAGATAGGCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SDKAGQPKCYSSAIGADRLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...CCTATCTGCCCCAATAGCTGAGCTGTAGCATTTGGGCTGGCCTGCCTTATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp AAACAATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAAATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: KQWEGESTRQPYGQAVEEIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...TTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGTCTGCAGCCAAGTGAGACGTTAGGTATGAGGTATTGGTCTGCCGGCTGGGCTTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: GLQPSETLGMRYWSAGWAFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...AGCCCAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CAA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTTTTCCTGGCCCTATAATGCCACACCCTGAGGTCCCTCTGGCAGGTGGAAGGGAAACAAATGGCCAATaGCATCTAGGGTACTCAGGT +
Preference number: 5 (lower is better)
Translates to: SFPGPIMPHPEVPLAGGRETNGQ*HLGYSG
Trigger: ACCTGAGTACCCTAGATGCAATTGGCCATTTGTTTC...CCTTCCACCTGCCAGAGGGACCTCAGGGTGTGGCATTATAGGGCCAGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAACTGGAAGCTAATCTaGTACCTTCCTAGACCCTGT +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYNWKLI*YLPRPC
Trigger: ACAGGGTCTAGGAAGGTACAAGATTAGCTTCCAGTT...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCGCCAATTCAGATGGGTaGCCTAATTATCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLANSDG*PNYPGS
Trigger: GGAGCCAGGATAATTAGGCAACCCATCTGAATTGGC...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCATGGTTCCCAGCAGCTaGGGCTGGGTCTTTATGGAA +
Preference number: 5 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPMVPSS*GWVFME
Trigger: TTCCATAAAGACCCAGCCCAAGCTGCTGGGAACCAT...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp GATGGGTGGGGACAGTCAGCGAGTGCATGCCCTAACCCCAAGGATCTGGCTGAGTTGTTCACAGGAGTCTaGAATCGCATCAAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: DGWGQSASACPNPKDLAELFTGV*NRIKVS
Trigger: ACTAACTTTGATGCGATTCAAGACTCCTGTGAACAA...CTCAGCCAGATCCTTGGGGTTAGGGCATGCACTCGCTGACTGTCCCCACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS GCA 90 bp TTAGGTGAACATCTTGTAACCCATTCATTCCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTCCTCCTGGTCCAGCAGTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LGEHLVTHSFPLSQK*TGLTTVLLVQQCCK
Trigger: CTTGCAGCACTGCTGGACCAGGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGGGAATGAATGGGTTACAAGATGTTCACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS-3UTR CAA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCCCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: FPTWSKVIHLWETFTCTAPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...GGCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CAA 90 bp AAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KESQPGSPMGKQWRNSSSLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...AGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AATGGGAAGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: NGKESQPGSPMGKQWRNSLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...GCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCTTCCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PSPKEESLPMRNGRSCRYLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...GTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AGGAGAGTCAACCAGGCAGCCCTATGGGCAAGCAGTGGAGGAACAGCAGCTCTGTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: RRVNQAALWASSGGTAALLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...CAGAGCTGCTGTTCCTCCACTGCTTGCCCATAGGGCTGCCTGGTTGACTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTGCCATTTTCCTCCTACCTTCTTGGCCTTACCCCCAGCCTCTTGATCTCCTTATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: SAIFLLPSWPYPQPLDLLIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...AAGGAGATCAAGAGGCTGGGGGTAAGGCCAAGAAGGTAGGAGGAAAATGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCTCAGTGCCTTTGCTTTaGTGTGTGTGTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLSVPLL*CVCVWK
Trigger: CTTCCACACACACACACACAAAAGCAAAGGCACTGA...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLTFSSP*VELTTC
Trigger: GCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CAA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CAA 90 bp GGAAGAGGAAACCATACTGCCAGGCACACCTGGGATACGGAGAAGGTTCTTCTCGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: GRGNHTARHTWDTEKVLLGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...GAGAAGAACCTTCTCCGTATCCCAGGTGTGCCTGGCAGTATGGTTTCCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: GVPSNEKWQELQVQLSQSIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...ACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: YFLCREDFPNGAQISLLEAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCTTACCCCCAGCCTCTaGATCTCCTTCTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSLTPSL*ISFCRQ
Trigger: TTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAAG...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGTTGGCTGTATGGTGTaGCAGGCTCCCAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSVGCMV*QAPNLR
Trigger: TCTCAGATTGGGAGCCTGCAACACCATACAGCCAAC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS TCA 90 bp AGCTGTAACAGTCCTAAGGCTCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGTTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: SCNSPKALISKRLLL*WPIPMCVAFSSYCR
Trigger: TCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGAGCCTTAGGACTGTTACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS TCA 90 bp ATTTGCAAGGGAACAGTCCACCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGTTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: ICKGTVHLISKRLLL*WPIPMCVAFSSYCR
Trigger: TCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGGTGGACTGTTCCCTTGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS-3UTR CAA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGGFSCP*SFILFP
Trigger: AGGGAAAAGGATGAAAGACAACGGACAACTAAACCC...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp AGGGCTTCCAAATCATCTCTCCGGCTTTGCTCTTTGCCAAGATGCGTGTTGATAATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: RASKSSLRLCSLPRCVLIIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCTTACCCCCAGCCTCTaGATCTCCTTCTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLTPSL*ISFCRQ
Trigger: TTGTCTGCAGAAGGAGATCAAGAGGCTGGGGGTAAG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp TTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAATATTCACAGTCCTaGTGGGGAAGGGGTGTGATA +
Preference number: 5 (lower is better)
Translates to: LVWISTLPQRGVPSNEKWQYSQS*WGRGVI
Trigger: TATCACACCCCTTCCCCACAAGGACTGTGAATATTG...CCATTTCTCATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGGGACCATTTATGCCTaGGTGGAGTCTTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRGTIYA*VESWPV
Trigger: CACAGGCCAAGACTCCACCAAGGCATAAATGGTCCC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAACTGGAAGCTAATCTaGTACCTTCCTAGACCCTGT +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLNWKLI*YLPRPC
Trigger: ACAGGGTCTAGGAAGGTACAAGATTAGCTTCCAGTT...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSTFSSP*VELTTC
Trigger: GCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
CDS-3UTR CAA 90 bp TGCAATCTCTGTCTGTGCTCCTACTGGATGGCAGGCAGCATGTTAGGAAACTGCGTCAAATTGGAGAATTaGCAAGGGAACAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: CNLCLCSYWMAGSMLGNCVKLEN*QGNSPP
Trigger: AGGTGGACTGTTCCCTTGCAAATTCTCCAATTTGAC...GCAGTTTCCTAACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS-3UTR CAA 90 bp TTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAATGCTTGTTAAAGACCTaGGCTGCACTGATCCCCCAT +
Preference number: 5 (lower is better)
Translates to: FRFTAIPVLTDGPRNVSECLLKT*AALIPH
Trigger: ATGGGGGATCAGTGCAGCCAAGGTCTTTAACAAGCA...TTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS TCA 90 bp TGTGTGTGGCTTTCTCGAGTTATTGCAGATGCACCAGAATCTACGTaGACTGACCCTACTGGAGTAGGAATAGGTCTCCCAACCCAATCA +
Preference number: 5 (lower is better)
Translates to: CVWLSRVIADAPEST*TDPTGVGIGLPTQS
Trigger: TGATTGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634302.1
ENST00000634654.1
ENST00000634722.1
ENST00000634811.1
ENST00000634909.1
ENST00000635142.1
ENST00000635414.1
CDS TCA 90 bp CGGTCAGAACTAAACAGTACTCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGTTATTGCAGA +
Preference number: 5 (lower is better)
Translates to: RSELNSTLISKRLLL*WPIPMCVAFSSYCR
Trigger: TCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGAGTACTGTTTAGTTCTGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635230.1
CDS TCA 90 bp GCAGATTATCTCTGCGCAAACTTAGCCCCTTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAACAGTACTCTGATTTCGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: ADYLCANLAPSTSKP*ASVRTKQYSDFEEA
Trigger: AGCCTCTTCGAAATCAGAGTACTGTTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGAAGGGGCTAAGTTTGCGCAGAGATAATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635230.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp TGGCATTATATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: WHYISHMVQSNTPVGDLHLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...GTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp CCCCAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PQRGVPSNEKWQELQVQLLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...CAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGATTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: RGVPSNEKWQELQVQLSQGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634302.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGGCTGTGATTGGTGCATaGGAGTGGGCTCCCGTGGGA +
Preference number: 5 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMAVIGA*EWAPVG
Trigger: TCCCACGGGAGCCCACTCCAATGCACCAATCACAGC...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CAA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGCAATATTCACAGTCCTaGTGGGGAAGGGGTGTGATA +
Preference number: 5 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMQYSQS*WGRGVI
Trigger: TATCACACCCCTTCCCCACAAGGACTGTGAATATTG...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp TTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTCTTGCTTGTTAAAGACCTaGGCTGATTTCGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: FTAIPVLTDGPRNVSEGSCLLKT*ADFEEA
Trigger: AGCCTCTTCGAAATCAGCCAAGGTCTTTAACAAGCA...AGAGCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp AGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCGACAAAACACTCTGCTaGTTAAAGACCTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: RFTAIPVLTDGPRNVSEGDKTLC*LKTLAD
Trigger: ATCAGCCAAGGTCTTTAACAAGCAGAGTGTTTTGTC...GCCTTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS TCA 90 bp TCCAGAAGAATCTGTTTAGGTGCCTCTTCCCCTGTGCCAGATGGCTaGGTTGTTAACATCATAATGCTCAGCTGTAACAGTCCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: SRRICLGASSPVPDG*VVNIIMLSCNSPKA
Trigger: AGCCTTAGGACTGTTACAGCTGAGCATTATGATGTTAACAACTCAGCCATCTGGCACAGGGGAAGAGGCACCTAAACAGATTCTTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CAA 90 bp GTGGGATCATCAACATTCAGCTCTCCATTGGTTGAGCTAACCACCTGCACTGATGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: VGSSTFSSPLVELTTCTDGFSCP*SFILFP
Trigger: AGGGAAAAGGATGAAAGACAACGGACAACTAAACCC...ATCAGTGCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTCAGAGTCCCTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: VPSNEKWQELQVQLSQSPLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...GGGACTCTGACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAAGTGAAGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: FRFTAIPVLTDGPRNVSEGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...TTCACTTACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CAA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp ACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: TCLFQSSSQSKGPRNEEGGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CAA 90 bp TCTTCTTTTTGGTTTGGATATCCACCCTCCCCCAAAGAGGAGTCCCTTCCAATGTTTCTTCTTTTTGGTTaGGATATCCACCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SSFWFGYPPSPKEESLPMFLLFG*DIHPPP
Trigger: TGGGGGAGGGTGGATATCCAAACCAAAAAGAAGAAA...CATTGGAAGGGACTCCTCTTTGGGGGAGGGTGGATATCCAAACCAAAAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCGCTACAGCTCAGCTATaGGGGCAGATAGGATACACC +
Preference number: 5 (lower is better)
Translates to: KETINMSRNLRISAVICSATAQL*GQIGYT
Trigger: GGTGTATCCTATCTGCCCCAATAGCTGAGCTGTAGC...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGCTGGTCTCGAACTCTaGACCTCACATGATCCACTT +
Preference number: 5 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRAGLEL*TSHDPL
Trigger: AAGTGGATCATGTGAGGTCAAGAGTTCGAGACCAGC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp ATTTCCCACATGGTCCAAAGTAATACACCTGTGGGAGACCTTCACCTGCACTGCGAGCACGTGATTTTATaGGTTCCTAATCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ISHMVQSNTPVGDLHLHCEHVIL*VPNLSS
Trigger: AGAGCTCAGATTAGGAACCAATAAAATCACGTGCTC...GCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS-3UTR CAA 90 bp AGGAGGAGTGTGCAATCTCTGTCTGTGCTCCTACTGGATGGCAGGCAGCATGTTATTTTCCTAGTCAAATaGGAGAATTTGCAAGGGAAC +
Preference number: 5 (lower is better)
Translates to: RRSVQSLSVLLLDGRQHVIFLVK*ENLQGN
Trigger: GTTCCCTTGCAAATTCTCCAATTTGACTAGGAAAAT...AACATGCTGCCTGCCATCCAGTAGGAGCACAGACAGAGATTGCACACTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS GCA 90 bp TTAGGTGAACATCTTGTAACCCATTCATTCCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTCCTCATGTACCACACTAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: LGEHLVTHSFPLSQK*TGLTTVLMYHTNAR
Trigger: TCTTGCATTAGTGTGGTACATGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGGGAATGAATGGGTTACAAGATGTTCACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTGFSCP*SFILFP
Trigger: AGGGAAAAGGATGAAAGACAACGGACAACTAAACCC...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: KETINMSRNLRISAVICSAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TATAACATGCTCTTTCTTATTGCCTTGTCGACCAATCAGGAAGTTCTCTGGCTTTTGCCAACCCTGAAGTaGGGTCCCACCATAAGAACC +
Preference number: 5 (lower is better)
Translates to: YNMLFLIALSTNQEVLWLLPTLK*GPTIRT
Trigger: GGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAA...AAGCCAGAGAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp CCAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: PVLFQRSLFQVHCHPSSHPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...GTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp AAAGAGACAATCAACATGTCTAGAAACCTCAGGATCTCTGCTGTCATCTGTAGCCTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: KETINMSRNLRISAVICSLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...GCTACAGATGACAGCAGAGATCCTGAGGTTTCTAGACATGTTGATTGTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp TATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTTTTAATGTGTCAGCCTaGAGTCCTTGCCAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: YFNDLYFRFTAIPVLTDGFNVSA*SPCQGR
Trigger: CCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAA...ACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHTFSSP*VELTTC
Trigger: GCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607537.6
CDS-3UTR CAA 90 bp CATGTTAGGAAACTGCACGCAGGTCACAAGGAGGCAGATTATCTCTGCGCAAACTTTTCAGTTTTGCACTaGCTTGTTTCAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HVRKLHAGHKEADYLCANFSVLH*LVSKLL
Trigger: GAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAA...GTTTGCGCAGAGATAATCTGCCTCCTTGTGACCTGCGTGCAGTTTCCTAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CAA 90 bp CTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCGAAATGTAGACAAAACACTCTGCTaGTTAAAGACCTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LYFRFTAIPVLTDGPRNVDKTLC*LKTLAA
Trigger: TGCAGCCAAGGTCTTTAACAAGCAGAGTGTTTTGTC...TACATTTCGGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634909.1
CDS GCA 90 bp ATCTGGTTAATGTGGACCCAATCAGGCTTCTCTTGCATGTGTAGCTaGTTCTGCCACCTGGTTTCATTTCCAGCACATTATTCCTGTTTA +
Preference number: 5 (lower is better)
Translates to: IWLMWTQSGFSCMCS*FCHLVSFPAHYSCL
Trigger: TAAACAGGAATAATGTGCTGGAAATGAAACCAGGTGGCAGAAGCAGCTACACATGCAAGAGAAGCCTGATTGGGTCCACATTAACCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CAA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRGFSCP*SFILFP
Trigger: AGGGAAAAGGATGAAAGACAACGGACAACTAAACCC...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp CTTTGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: LCSLPRCVLIDIYLAVPVAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...AACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGTCCCCTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: STIFISGSLPSQFSLMVPLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...GGGGACCATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp CAAAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTACAATTGAGTTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: QRGVPSNEKWQELQVQLSLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...ACTCAATTGTACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303052.13
ENST00000606225.1
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
CDS-3UTR CAA 90 bp CAGTCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTATCATCTCTCCGGCTTaGCTCTTTGCCAAGATGCGT +
Preference number: 5 (lower is better)
Translates to: QSYFNDLYFRFTAIPVLTIISPA*LFAKMR
Trigger: ACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGAT...AGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp ATGTGGGCTTGGGAGATGCATCAAACGAAAGTTCCTCTGAGAAGACGTTTTCTTGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: MWAWEMHQTKVPLRRRFLGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...AAGAAAACGTCTTCTCAGAGGAACTTTCGTTTGATGCATCTCCCAAGCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp TTGTGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: LCFPWCPRKWATLRSHIRGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...TCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATTCAGTGCCTTTGCTTTaGTGTGTGTGTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHSVPLL*CVCVWK
Trigger: CTTCCACACACACACACACAAAAGCAAAGGCACTGA...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp ACTTGCTTGTTTCAAAGCTCCTCTCAGAGTAAAGGTCCCAGAAATGAGGAGGGGTTTTCAGTTTTGCACTaGCTTGTTTCAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TCLFQSSSQSKGPRNEEGFSVLH*LVSKLL
Trigger: GAGGAGCTTTGAAACAAGCAAGTGCAAAACTGAAAA...CCCCTCCTCATTTCTGGGACCTTTACTCTGAGAGGAGCTTTGAAACAAGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635230.1
ENST00000635414.1
CDS-3UTR CAA 90 bp TCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGCAGTGTGCACTCCTTaGTGCCATGGGTTTAGTTGT +
Preference number: 5 (lower is better)
Translates to: SYFNDLYFRFTAIPVLTDAVCTP*CHGFSC
Trigger: ACAACTAAACCCATGGCACAAAGGAGTGCACACTGC...ATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTAAACCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: CSLPRCVLIDIYLAVPVKPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGG...TTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: YFLCREDFPNGAQISLLEGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TGTTTTCCATGGTGCCCTAGGAAATGGGCTACTCTGAGATCACATATCAGAACCTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: CFPWCPRKWATLRSHIRTLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...GGTTCTGATATGTGATCTCAGAGTAGCCCATTTCCTAGGGCACCATGGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTAAACTCCGGCTTTGCTCTTaGCCAAGATGCGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: CSLPRCVLIDIYLAVPVKLRLCS*PRCVLI
Trigger: TATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAG...TTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: YFLCREDFPNGAQISLLEGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp TCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGAACCATCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SAEKIFLMVHKYLSWRNHLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...ATGGTTCCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp CTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: LISTIFISGSLPSQFSLMGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...CATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp ACTTCCTCTGCAGAGAAGATTTTCCTAATGGTGCACAAATATCTCTCCTGGAGGTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: TSSAEKIFLMVHKYLSWRLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...CCTCCAGGAGAGATATTTGTGCACCATTAGGAAAATCTTCTCTGCAGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000607537.6
CDS-3UTR CAA 90 bp ATCCACTGTAGCCCTGATAACATGATTCTTTCGGTTCACTATGTCTTTTTCATGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: IHCSPDNMILSVHYVFFMGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CATGAAAAAGACATAGTGAACCGAAAGAATCATGTTATCAGGGCTACAGTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634722.1
CDS-3UTR CAA 90 bp TCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: SYFNDLYFRFTAIPVLTDGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...ATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000606793.3
ENST00000634909.1
CDS-3UTR CAA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCCTAGACCCTGTTTATaGCTGGACAGGCTCCATAAT +
Preference number: 5 (lower is better)
Translates to: VISALCKVHQGNFSRNGNPRPCL*LDRLHN
Trigger: ATTATGGAGCCTGTCCAGCAATAAACAGGGTCTAGG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp TCTTATTTCAACGATCTTTATTTCAGGTTCACTGCCATCCCAGTTCTCACTGATCTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SYFNDLYFRFTAIPVLTDLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...ATCAGTGAGAACTGGGATGGCAGTGAACCTGAAATAAAGATCGTTGAAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS-3UTR CAA 90 bp TGCTCTTTGCCAAGATGCGTGTTGATAGACATATATCTTGCAGTTCCAGTTAAACTCTTTCTTATTGCCTaGTCGACCAATCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CSLPRCVLIDIYLAVPVKLFLIA*STNQEV
Trigger: AACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAG...TTTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp ATAATGTGTATAACATGCTCTTTCTTATTGCCTTGTCGACCAATCAGGAAGTTCGGGTCAATGTATTCCTaGGCCAGTCCAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: IMCITCSFLLPCRPIRKFGSMYS*ASPKSI
Trigger: TATAGACTTTGGACTGGCCAAGGAATACATTGACCC...GAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATGTTATACACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TATAACATGCTCTTTCTTATTGCCTTGTCGACCAATCAGGAAGTTCTCTGGCTTTTGCCAAGATGCGTGTaGATAGACATATATCTTGCA +
Preference number: 5 (lower is better)
Translates to: YNMLFLIALSTNQEVLWLLPRCV*IDIYLA
Trigger: TGCAAGATATATGTCTATCAACACGCATCTTGGCAA...AAGCCAGAGAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635324.1
CDS-3UTR CAA 90 bp TCAAAGTTAGTCCTAGCTAGATTGTTAATTACAAATGAGCCGAGGGAGATTAAAGAAACAAATGGCCAATaGCATCTAGGGTACTCAGGT +
Preference number: 5 (lower is better)
Translates to: SKLVLARLLITNEPREIKETNGQ*HLGYSG
Trigger: ACCTGAGTACCCTAGATGCAATTGGCCATTTGTTTC...TTTAATCTCCCTCGGCTCATTTGTAATTAACAATCTAGCTAGGACTAACTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303052.13
CDS-3UTR CAA 90 bp GTTATTTCTGCTCTGTGTAAGGTACATCAAGGGAATTTTTCAAGAAATGGCAACCCCACTGAACTAAGTTaGGAAATTACTTTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: VISALCKVHQGNFSRNGNPTELS*EITLGV
Trigger: CACCCCTAAAGTAATTTCCAAACTTAGTTCAGTGGG...GTTGCCATTTCTTGAAAAATTCCCTTGATGTACCTTACACAGAGCAGAAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS-3UTR CAA 90 bp GGTGAGGAAAAGTTAAACTTTCTATACAGTAAGTTAGCAATGCCCAAATCCCAACCCACTGAACTAAGTTaGGAAATTACTTTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: GEEKLNFLYSKLAMPKSQPTELS*EITLGV
Trigger: CACCCCTAAAGTAATTTCCAAACTTAGTTCAGTGGG...TTGGGATTTGGGCATTGCTAACTTACTGTATAGAAAGTTTAACTTTTCCTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303052.13
ENST00000635142.1
CDS GCA 72 bp ATGAGGCGGGCGCGGTCCCCTCCCCGAGGCGCCAAGTaGTTCTCTACCCACCCGCAGCGGTGGTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: MRRARSPPRGAK*FSTHPQRWFLS
Trigger: AGAGAGAAACCACCGCTGCGGGTGGGTAGAGAAGCACTTGGCGCCTCGGGGAGGGGACCGCGCCCGCCTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303052.13
ENST00000607537.6
ENST00000634811.1
ENST00000635529.1
CDS GCA 72 bp ACTGGCCTCACAACTGTCCTCCTGGTCCAGCAGTGCTaGAAGGCGCAAATGAGGCGGGCGCGGTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: TGLTTVLLVQQC*KAQMRRARSPP
Trigger: GGGAGGGGACCGCGCCCGCCTCATTTGCGCCTTGCAGCACTGCTGGACCAGGAGGACAGTTGTGAGGCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS TCA 72 bp GAAGTTGGGTCCCACCATAAGAACCCCAGAGGACGATaGGGAGCCAGATGGTCGAGAGCAGTGTGCACTCCT +
Preference number: 6 (lower is better)
Translates to: EVGSHHKNPRGR*GARWSRAVCTP
Trigger: AGGAGTGCACACTGCTCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTTCTTATGGTGGGACCCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635359.1
ENST00000635514.1
ENST00000635529.1
CDS CCA 72 bp TGTAACCCATTCATTCCCACTGAGCCAAAAGTGCACTaGCCTCACAACTGTCCTCCTGGTCCAGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: CNPFIPTEPKVH*PHNCPPGPAVL
Trigger: CAGCACTGCTGGACCAGGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGGGAATGAATGGGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS TCA 72 bp GGAACAGTCCACCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: GTVHLISKRLLL*WPIPMCVAFSS
Trigger: ACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGGTGGACTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635414.1
CDS GCA 72 bp CATCTTGTAACCCATTCATTCCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTCCTCCTGGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: HLVTHSFPLSQK*TGLTTVLLVQQ
Trigger: CTGCTGGACCAGGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGGGAATGAATGGGTTACAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634811.1
CDS CAA 90 bp TTGGTTCCTAATCTGAGCTCTCCGAAGTTCCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGTCCCACCATAAGAACCCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: LVPNLSSPKFPHPIF*PTLKLGPTIRTPED
Trigger: GTCCTCTGGGGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGGGAACTTCGGAGAGCTCAGATTAGGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635529.1
CDS TCA 72 bp AGTCCTAAGGCTCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: SPKALISKRLLL*WPIPMCVAFSS
Trigger: ACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGAGCCTTAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS GCA 72 bp GGAGCCAGATGGTCGAGAGCAGTGTGCACTCCTTTGTaGCATGGGTTTAGTTGTCCGTTGTCTTTCATCCTT +
Preference number: 6 (lower is better)
Translates to: GARWSRAVCTPL*HGFSCPLSFIL
Trigger: AAGGATGAAAGACAACGGACAACTAAACCCATGGCACAAAGGAGTGCACACTGCTCTCGACCATCTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635514.1
ENST00000635529.1
CDS CCA 72 bp AGAGGCTGCTGTTGTGATGGCCGATCCCTATGTGTGTaGCTTTCTCGAGTTATTGCAGATGCACCAGAATCT +
Preference number: 6 (lower is better)
Translates to: RGCCCDGRSLCV*LSRVIADAPES
Trigger: AGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634302.1
ENST00000634654.1
ENST00000634722.1
ENST00000634811.1
ENST00000634909.1
ENST00000635142.1
ENST00000635230.1
ENST00000635414.1
CDS CAA 90 bp TTTTTACCTAATCTGAGCTCTCCGAAGTTCCCACATCCTATCTTCTaGCCAACCCTGAAGTTGGGTCCCACCATAAGAACCCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: FLPNLSSPKFPHPIF*PTLKLGPTIRTPED
Trigger: GTCCTCTGGGGTTCTTATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGATGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635359.1
ENST00000635514.1
CDS TCA 72 bp TCGAGTTATTGCAGATGCACCAGAATCTACGTGAACTaGCCCTACTGGAGTAGGAATAGGTCTCCCAACCCA +
Preference number: 6 (lower is better)
Translates to: SSYCRCTRIYVN*PYWSRNRSPNP
Trigger: TGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGCATCTGCAATAACTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634302.1
ENST00000634654.1
ENST00000634722.1
ENST00000634811.1
ENST00000634909.1
ENST00000635142.1
ENST00000635414.1
CDS TCA 72 bp CTAAACAGTACTCTGATTTCGAAGAGGCTGCTGTTGTaGTGGCCGATCCCTATGTGTGTGGCTTTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: LNSTLISKRLLL*WPIPMCVAFSS
Trigger: ACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGAGTACTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635230.1
CDS TCA 72 bp CTCTGCGCAAACTTAGCCCCTTCAACTAGCAAACCCTaGGCCTCGGTCAGAACTAAACAGTACTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: LCANLAPSTSKP*ASVRTKQYSDF
Trigger: GAAATCAGAGTACTGTTTAGTTCTGACCGAGGCTCAGGGTTTGCTAGTTGAAGGGGCTAAGTTTGCGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635230.1
CDS GCA 72 bp CATCTTGTAACCCATTCATTCCCACTGAGCCAAAAGTaGACTGGCCTCACAACTGTCCTCATGTACCACACT +
Preference number: 6 (lower is better)
Translates to: HLVTHSFPLSQK*TGLTTVLMYHT
Trigger: AGTGTGGTACATGAGGACAGTTGTGAGGCCAGTGCACTTTTGGCTCAGTGGGAATGAATGGGTTACAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606793.3
CDS CAA 72 bp ATGGCCGATCCCTATGTGTGTGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTACGTGAACTGACCCTA +
Preference number: 6 (lower is better)
Translates to: MADPYVCGFLEL*QMHQNLRELTL
Trigger: TAGGGTCAGTTCACGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634302.1
ENST00000634654.1
ENST00000634722.1
ENST00000634811.1
ENST00000634909.1
ENST00000635142.1
ENST00000635230.1
ENST00000635414.1
CDS CAA 90 bp TCGAGAGCAGTGTGCACTCCTTTGTGCCATGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCTACTAGGATGGTCCATGATCCTACA +
Preference number: 6 (lower is better)
Translates to: SRAVCTPLCHGFSCP*SFILFPTRMVHDPT
Trigger: TGTAGGATCATGGACCATCCTAGTAGGGAAAAGGATGAAAGACAACGGACAACTAAACCCATGGCACAAAGGAGTGCACACTGCTCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635514.1
ENST00000635529.1
CDS CAA 90 bp GCCCTTAAAAGGGACAGGAATTGCTCACTTGGAGAGCTTGGTTTTTaGAGACCTAAGTTTGCTGATGCTCCCGGCCGAATAAAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: ALKRDRNCSLGELGF*RPKFADAPGRIKPF
Trigger: AAAGGGCTTTATTCGGCCGGGAGCATCAGCAAACTTAGGTCTCAAAAAACCAAGCTCTCCAAGTGAGCAATTCCTGTCCCTTTTAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635514.1
CDS TCA 72 bp CTTTCTCGAGTTATTGCAGATGCACCAGAATCTACGTaGACTGACCCTACTGGAGTAGGAATAGGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: LSRVIADAPEST*TDPTGVGIGLP
Trigger: TGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634302.1
ENST00000634654.1
ENST00000634722.1
ENST00000634811.1
ENST00000634909.1
ENST00000635142.1
ENST00000635414.1
CDS CAA 72 bp GTGTGCACTCCTTTGTGCCATGGGTTTAGTTGTCCGTaGTCTTTCATCCTTTTCCCTACTAGGATGGTCCAT +
Preference number: 6 (lower is better)
Translates to: VCTPLCHGFSCP*SFILFPTRMVH
Trigger: ATGGACCATCCTAGTAGGGAAAAGGATGAAAGACAACGGACAACTAAACCCATGGCACAAAGGAGTGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000303052.13
ENST00000561349.6
ENST00000606225.1
ENST00000606793.3
ENST00000607537.6
ENST00000634654.1
ENST00000634811.1
ENST00000635142.1
ENST00000635270.1
ENST00000635324.1
ENST00000635514.1
ENST00000635529.1
CDS TCA 72 bp ATCTGTTTAGGTGCCTCTTCCCCTGTGCCAGATGGCTaGGTTGTTAACATCATAATGCTCAGCTGTAACAGT +
Preference number: 6 (lower is better)
Translates to: ICLGASSPVPDG*VVNIIMLSCNS
Trigger: ACTGTTACAGCTGAGCATTATGATGTTAACAACTCAGCCATCTGGCACAGGGGAAGAGGCACCTAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606225.1
CDS TCA 72 bp TTTTACATCTGCTACTATTCTGATCTTGCTCATATGTaGCTTTTGTCCAGAAGAATCTGTTTAGGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: FYICYYSDLAHM*LLSRRICLGAS
Trigger: AGAGGCACCTAAACAGATTCTTCTGGACAAAAGTCACATATGAGCAAGATCAGAATAGTAGCAGATGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606225.1