RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSGALNACT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000147408

Ensembl transcript IDs: ENST00000332246.10, ENST00000397998.7, ENST00000454498.6, ENST00000517494.1, ENST00000517651.5, ENST00000518542.1, ENST00000519222.5, ENST00000520003.5, ENST00000522573.5, ENST00000522732.1, ENST00000522854.5, ENST00000523227.5, ENST00000523262.5, ENST00000523919.5, ENST00000524112.1, ENST00000524213.5

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTATCTCGTGCCTGAACACCAGCATGCCCAGCTGGCCGTGGGATaGCTCGTTCATGGCCTTGGACTGCATGCACATCTTGTACTGCTC +
Preference number: 1 (lower is better)
Translates to: LYLVPEHQHAQLAVG*LVHGLGLHAHLVLL
Trigger: GAGCAGTACAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGTGTTCAGGCACGAGATAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 90 bp TTGTCTTCTGTTTCTGTTTGCGAAGGTGAGCCTCTATCTCGTGCCTaGACACCAGCATGCCCAGCTGGCCGTGGGATGCCTCGTTCATGG +
Preference number: 1 (lower is better)
Translates to: LSSVSVCEGEPLSRA*TPACPAGRGMPRSW
Trigger: CCATGAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGTGTTCAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAAACAGAAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 90 bp ACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGA +
Preference number: 1 (lower is better)
Translates to: TSVLVQTIPSLCLNA*HSVPDRISIWHVLG
Trigger: TCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATGTCAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTaGCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGC +
Preference number: 1 (lower is better)
Translates to: HQNLHTIRLIISQAF*LCQTLHRVQLGYFC
Trigger: GCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTA +
Preference number: 1 (lower is better)
Translates to: SHKHSAFVRHFTGCN*VTFAGKAEILISVV
Trigger: TACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR TCA 90 bp ACAAACCATTCCTTCCCTATGTCTCAATGCCTGACATTCAGTGCCTaGCAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTT +
Preference number: 1 (lower is better)
Translates to: TNHSFPMSQCLTFSA*QNQHLACPWIWHQF
Trigger: AAATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATGTCAGGCATTGAGACATAGGGAAGGAATGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR TCA 90 bp GGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGTACTGACTaGAAAGAACTGGATAAAATACCTTCTTCCCTGGCTGTGTATTCA +
Preference number: 1 (lower is better)
Translates to: GLHHGGRILCQDCTD*KELDKIPSSLAVYS
Trigger: TGAATACACAGCCAGGGAAGAAGGTATTTTATCCAGTTCTTTTCAGTCAGTACAATCCTGGCATAATATACGGCCACCATGATGCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 90 bp CATTTCTTCTTATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTaGAAAGAGATTGTTTGGTTCACACGGTATACTTTGGTTTATTTA +
Preference number: 1 (lower is better)
Translates to: HFFLWKPEARRSTLF*KEIVWFTRYTLVYL
Trigger: TAAATAAACCAAAGTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCATAAGAAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTAGTGAGCAGAGTTCGTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPSEQSS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACGAACTCTGCTCACT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
3UTR-3UTR CCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACACCAGCATGCCCAGCTaGCCGTGGGATGCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYTSMPS*PWDASF
Trigger: GAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEANMCI*AITASK
Trigger: CTTAGAAGCTGTGATGGCTCAGATGCACATATTGGC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
3UTR-3UTR GCA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGAATCTCACAAGCATTCTaGCTTTGTCAGACACTTCAC +
Preference number: 2 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRISQAF*LCQTLH
Trigger: GTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGAT...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR GCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTGGCCTTGGACTGCATaGACATCTTGTACTGCTCGG +
Preference number: 2 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQWPWTA*TSCTAR
Trigger: CCGAGCAGTACAAGATGTGCATGCAGTCCAAGGCCA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLANMCI*AITASK
Trigger: CTTAGAAGCTGTGATGGCTCAGATGCACATATTGGC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
3UTR-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGGGACTGCATCATGGTaGCCGTATATTATGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQGTASW*PYIMPG
Trigger: TCCTGGCATAATATACGGCCACCATGATGCAGTCCC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGCTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGA +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTLCLNA*HSVPDR
Trigger: TCTGTCAGGCACTGAATGTCAGGCATTGAGACATAG...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLFTGCN*VTFAGK
Trigger: TTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGCCTCTATCTCGTGCCTaGACACCAGCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRPLSRA*TPACPA
Trigger: AGCTGGGCATGCTGGTGTTCAGGCACGAGATAGAGG...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGACAGAATCAGCATTTaGCATGTCCTTGGATATGGC +
Preference number: 2 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQDRISI*HVLGYG
Trigger: GCCATATCCAAGGACATGCCAAATGCTGATTCTGTC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGA +
Preference number: 2 (lower is better)
Translates to: TSILPLSDTSQGATGLLLLCLNA*HSVPDR
Trigger: TCTGTCAGGCACTGAATGTCAGGCATTGAGACATAG...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCAAAGTAAACAACAGTaGGATGGACTCTCCCATCCT +
Preference number: 2 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFQSKQQ*DGLSHP
Trigger: AGGATGGGAGAGTCCATCTCACTGTTGTTTACTTTG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTAAGTCTGACCGATACTaGCACGTCATCCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVKSDRY*HVIPNP
Trigger: TGGATTTGGGATGACGTGTCAGTATCGGTCAGACTT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR GCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGCAACTGGGTTACTTTTaGAGGCAAAGCGGAGATTTT +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTQLGYF*RQSGDF
Trigger: AAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTG...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTAGACACTTCACAGGGTaGAACTGGGTTACTTTTGCA +
Preference number: 2 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFRHFTG*NWVTFA
Trigger: TGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCT...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGATCTCACAAGCATTCTaGCTTTGTCAGACACTTCAC +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTISQAF*LCQTLH
Trigger: GTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGAT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACTTCTTTATGACCAGCTaGTGTTCCAAGGGAGGGACT +
Preference number: 2 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYFFMTS*CSKGGT
Trigger: AGTCCCTCCCTTGGAACAGCAGCTGGTCATAAAGAA...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAGGGATGCCTCGTTCATaGCCTTGGACTGCATGCACA +
Preference number: 2 (lower is better)
Translates to: FAGKAEILISVVKSPTERGMPRS*PWTACT
Trigger: TGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCC...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGACGATATCACCAGTCTaGATGAGTTTCCTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTTISPV*MSFLFC
Trigger: ACAGAAAAGGAAACTCATTCAGACTGGTGATATCGT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATCAGTTTCCTTCTTTATaGCCAGCTGCTGTTCCAAGG +
Preference number: 2 (lower is better)
Translates to: HSVPDRISIWHVLGYGINQFPSL*PAAVPR
Trigger: CCTTGGAACAGCAGCTGGTCATAAAGAAGGAAACTG...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTCTCCGCCCCAGCCTTTaGTGTCCAGATCAAACCCAC +
Preference number: 2 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCLRPSL*CPDQTH
Trigger: GTGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAG...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTTTCTGTTTGCGAAGGTaGGCCTCTATCTCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCFCLRR*ASISCL
Trigger: CAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAA...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR GCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTAGACACTTCACAGGGTaGAACTGGGTTACTTTTGCA +
Preference number: 2 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCRHFTG*NWVTFA
Trigger: TGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCT...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTAGACACTTCACAGGGTaGAACTGGGTTACTTTTGCA +
Preference number: 2 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVRHFTG*NWVTFA
Trigger: TGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTAGTGAGCAGAGTTCGTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCSEQSS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACGAACTCTGCTCACT...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTGGGTCAGCTCGTCCATaGAGCGCTTCTCATGCCAGA +
Preference number: 2 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCGSARP*SASHAR
Trigger: TCTGGCATGAGAAGCGCTGCATGGACGAGCTGACCC...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTGAAATCACTTAGCTaGTTATCCTCAGCCAATATG +
Preference number: 2 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPVKSLS*LSSANM
Trigger: CATATTGGCTGAGGATAACCAGCTAAGTGATTTCAC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
3UTR CAA 90 bp TTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: FTGCNWVTFAGKAEI*ISVVKSPTERNRRL
Trigger: AAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGAAAATGTGGTTTCTaGCTTTTAGGTACATCACGA +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTRKCGF*LLGTSR
Trigger: TCGTGATGTACCTAAAAGTCAGAAACCACATTTTCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTAAAAGAGAAGGACGTTaGTTCCCTTCCAGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCKREGR*FPSRSG
Trigger: CCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTT...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 2 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGCATTTGGCATGTCCTTaGATATGGCATCAATTTGAT +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTHLACP*IWHQFD
Trigger: ATCAAATTGATGCCATATCCAAGGACATGCCAAATG...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTCTGAGGAGAAAATGTaGTTTCTGACTTTTAGGTAC +
Preference number: 2 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQSEEKM*FLTFRY
Trigger: GTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGATTAGCTCATGCATCTaGTGCTGGCTAATAATTTTC +
Preference number: 2 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTISSCI*CWLIIF
Trigger: GAAAATTATTAGCCAGCACCAGATGCATGAGCTAAT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGAAATACCTTCTTCCCTaGCTGTGTATTCAGCCTACA +
Preference number: 2 (lower is better)
Translates to: TSILPLSDTSQGATGLLLKYLLP*LCIQPT
Trigger: TGTAGGCTGAATACACAGCCAGGGAAGAAGGTATTT...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR TCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: IQCLTESAFGMSLDMASIRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATCAACTGGGTTACTTTTaGAGGCAAAGCGGAGATTTT +
Preference number: 2 (lower is better)
Translates to: HSVPDRISIWHVLGYGINQLGYF*RQSGDF
Trigger: AAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTG...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATATGCCTGACATTCAGTaGCTGACAGAATCAGCATTT +
Preference number: 2 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDMPDIQ*LTESAF
Trigger: AAATGCTGATTCTGTCAGGCACTGAATGTCAGGCAT...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 2 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGTGAAATCACTTAGCTaGTTATCCTCAGCCAATATG +
Preference number: 2 (lower is better)
Translates to: TSILPLSDTSQGATGLLLVKSLS*LSSANM
Trigger: CATATTGGCTGAGGATAACCAGCTAAGTGATTTCAC...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR GCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTATCTCACAAGCATTCTaGCTTTGTCAGACACTTCAC +
Preference number: 2 (lower is better)
Translates to: IQCLTESAFGMSLDMASIISQAF*LCQTLH
Trigger: GTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGAT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGCCTCCAGTGTTCAGTTaGTCCTCTTCGAAAATACTC +
Preference number: 2 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRPPVFS*SSSKIL
Trigger: GAGTATTTTCGAAGAGGAGCAACTGAACACTGGAGG...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTTTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLFTGCN*VTFAGK
Trigger: TTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGGACAGAATCAGCATTTaGCATGTCCTTGGATATGGC +
Preference number: 2 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLDRISI*HVLGYG
Trigger: GCCATATCCAAGGACATGCCAAATGCTGATTCTGTC...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CAA 90 bp GAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTaGGTTCACACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAG +
Preference number: 2 (lower is better)
Translates to: EARSQEEHPVLKRDC*VHTVYFGLFKQVRK
Trigger: CTTTCTTACCTGTTTAAATAAACCAAAGTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CAA 90 bp CCATTTCTTCTTATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTaGAAAAGAGATTGTTTGGTTCACACGGTATACTTTGGTTTATTT +
Preference number: 2 (lower is better)
Translates to: PFLLMEARSQEEHPV*KRDCLVHTVYFGLF
Trigger: AAATAAACCAAAGTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCATAAGAAGAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATTCTGAGGAGAAAATGTaGTTTCTGACTTTTAGGTAC +
Preference number: 2 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDSEEKM*FLTFRY
Trigger: GTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGA...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGACGATATCACCAGTCTaGATGAGTTTCCTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRTISPV*MSFLFC
Trigger: ACAGAAAAGGAAACTCATTCAGACTGGTGATATCGT...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGTTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR TCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTTATCACCAGTCTGAATaGGTTTCCTTTTCTGTAAAG +
Preference number: 2 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCYHQSE*VSFSVK
Trigger: CTTTACAGAAAAGGAAACTCATTCAGACTGGTGATA...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGCATTTGGCATGTCCTTaGATATGGCATCAATTTGAT +
Preference number: 2 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLHLACP*IWHQFD
Trigger: ATCAAATTGATGCCATATCCAAGGACATGCCAAATG...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR GCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAATGCCTGACATTCAGTaGCTGACAGAATCAGCATTT +
Preference number: 2 (lower is better)
Translates to: SSSKILFRESICTSVLVQMPDIQ*LTESAF
Trigger: AAATGCTGATTCTGTCAGGCACTGAATGTCAGGCAT...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCATTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 2 (lower is better)
Translates to: SSSKILFRESICTSVLVQACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR GCA 72 bp GTGCCTGAACACCAGCATGCCCAGCTGGCCGTGGGATaGCTCGTTCATGGCCTTGGACTGCATGCACATCTT +
Preference number: 3 (lower is better)
Translates to: VPEHQHAQLAVG*LVHGLGLHAHL
Trigger: AAGATGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGTGTTCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 72 bp GGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATaGGGTTGCTGTGGAGATACTTGCGATAAAGGTGCA +
Preference number: 3 (lower is better)
Translates to: GGRVLAQASVPL*GCCGDTCDKGA
Trigger: TGCACCTTTATCGCAAGTATCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGAGCAACTGGGTTACTTTaGCAGGCAAAGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRATGLL*QAKRRF
Trigger: AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGC...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTAAAAAGAGAAGGACGTaGCTTCCCTTCCAGAAGCGG +
Preference number: 3 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTKKRRT*LPFQKR
Trigger: CCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 72 bp TTTTTGCTACTTGTCTTCTGTTTCTGTTTGCGAAGGTaGGCCTCTATCTCGTGCCTGAACACCAGCATGCCC +
Preference number: 3 (lower is better)
Translates to: FLLLVFCFCLRR*ASISCLNTSMP
Trigger: GGGCATGCTGGTGTTCAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAAACAGAAGACAAGTAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR GCA 72 bp AGTAGATGTCCACATCACAGAAAAAGAGAAGGACGTTaGTTCCCTTCCAGAAGCGGGCTCCAACATCAAGTC +
Preference number: 3 (lower is better)
Translates to: SRCPHHRKREGR*FPSRSGLQHQV
Trigger: GACTTGATGTTGGAGCCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTTCTGTGATGTGGACATCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGTCCTCCAGTGTTCAGTaGCTCCTCTTCGAAAATACT +
Preference number: 3 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTSSSVQ*LLFENT
Trigger: AGTATTTTCGAAGAGGAGCAACTGAACACTGGAGGA...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp TGCTGTTCCAAGGGAGGGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGTTCAGCCTACACGTATaGAGGAATTCAGATGTGAAG +
Preference number: 3 (lower is better)
Translates to: CCSKGGTASWWPYIMPGLFSLHV*RNSDVK
Trigger: CTTCACATCTGAATTCCTCAATACGTGTAGGCTGAA...CAATCCTGGCATAATATACGGCCACCATGATGCAGTCCCTCCCTTGGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGAAGTCTTTTCTCTGTaGCAGCCACTTTCAGTAATT +
Preference number: 3 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLEVFSL*QPLSVI
Trigger: AATTACTGAAAGTGGCTGCAACAGAGAAAAGACTTC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTACAAGCATTCTGCCTTaGTCAGACACTTCACAGGGT +
Preference number: 3 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCTSILP*SDTSQG
Trigger: ACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGTCTCCGCCCCAGCCTTaGATGTCCAGATCAAACCCA +
Preference number: 3 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRSPPQP*MSRSNP
Trigger: TGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAGA...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTGCCTCGTTCATGGCCTaGGACTGCATGCACATCTTG +
Preference number: 3 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCASFMA*DCMHIL
Trigger: CAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGC...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR TCA 72 bp TCCTTCCCTATGTCTCAATGCCTGACATTCAGTGCCTaGCAGAATCAGCATTTGGCATGTCCTTGGATATGG +
Preference number: 3 (lower is better)
Translates to: SFPMSQCLTFSA*QNQHLACPWIW
Trigger: CCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATGTCAGGCATTGAGACATAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR TCA 72 bp TCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAGATCCAACACCGCACA +
Preference number: 3 (lower is better)
Translates to: SLSWLSSANMCI*AITASKIQHRT
Trigger: TGTGCGGTGTTGGATCTTAGAAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
3UTR GCA 72 bp CTCCACACCATTAGGCTTATAATCTCACAAGCATTCTaGCTTTGTCAGACACTTCACAGGGTGCAACTGGGT +
Preference number: 3 (lower is better)
Translates to: LHTIRLIISQAF*LCQTLHRVQLG
Trigger: ACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR GCA 72 bp CCATTCCTTCCCTATGTCTCAATGCCTGACATTCAGTaGCTGACAGAATCAGCATTTGGCATGTCCTTGGAT +
Preference number: 3 (lower is better)
Translates to: PFLPYVSMPDIQ*LTESAFGMSLD
Trigger: ATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATGTCAGGCATTGAGACATAGGGAAGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGC +
Preference number: 3 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTGKAEI*ISVVKS
Trigger: GCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCC...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATGCAACTGGGTTACTTTaGCAGGCAAAGCGGAGATTT +
Preference number: 3 (lower is better)
Translates to: HSVPDRISIWHVLGYGINATGLL*QAKRRF
Trigger: AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGC...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTTCCTCCAGTGTTCAGTaGCTCCTCTTCGAAAATACT +
Preference number: 3 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVSSSVQ*LLFENT
Trigger: AGTATTTTCGAAGAGGAGCAACTGAACACTGGAGGA...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CCA 72 bp CATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATT +
Preference number: 3 (lower is better)
Translates to: HSAFVRHFTGCN*VTFAGKAEILI
Trigger: AATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CCA 72 bp TCAAGTCCCTTTCCCCGAGAAAATTCTCCATTCAGCTaGATGAAGGTAAAGTTCCTGAAGTTGGCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: SSPFPRENSPFS*MKVKFLKLAAL
Trigger: CAAAGCTGCCAACTTCAGGAACTTTACCTTCATCCAGCTGAATGGAGAATTTTCTCGGGGAAAGGGACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR-3UTR CAA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGAAGTCTTTTCTCTGTaGCAGCCACTTTCAGTAATT +
Preference number: 3 (lower is better)
Translates to: TSILPLSDTSQGATGLLLEVFSL*QPLSVI
Trigger: AATTACTGAAAGTGGCTGCAACAGAGAAAAGACTTC...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGAAGTCTTTTCTCTGTaGCAGCCACTTTCAGTAATT +
Preference number: 3 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVEVFSL*QPLSVI
Trigger: AATTACTGAAAGTGGCTGCAACAGAGAAAAGACTTC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATATCAGTCCAATTCTTTaGTCGTCCTTTATGGAAGTC +
Preference number: 3 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDISPIL*SSFMEV
Trigger: GACTTCCATAAAGGACGACAAAAGAATTGGACTGAT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGACAAGCATTCTGCCTTaGTCAGACACTTCACAGGGT +
Preference number: 3 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRTSILP*SDTSQG
Trigger: ACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR TCA 72 bp AAGCGGTCCCTACTTCTGAGGAGAAAATGTGGTTTCTaGCTTTTAGGTACATCACGATATCACCAGTCTGAA +
Preference number: 3 (lower is better)
Translates to: KRSLLLRRKCGF*LLGTSRYHQSE
Trigger: TTCAGACTGGTGATATCGTGATGTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGAAGTAGGGACCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR GCA 72 bp TGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTaGAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAA +
Preference number: 3 (lower is better)
Translates to: CQTLHRVQLGYF*RQSGDFDFCCK
Trigger: TTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR-3UTR CAA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAATCAGTCCAATTCTTTaGTCGTCCTTTATGGAAGTC +
Preference number: 3 (lower is better)
Translates to: FAGKAEILISVVKSPTERISPIL*SSFMEV
Trigger: GACTTCCATAAAGGACGACAAAAGAATTGGACTGAT...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR TCA 72 bp CTAGAAACTAGAGCCCTGCTGATAGGCTCATTCATATaGGGAGAAATATGCTTGCCTTTCATGCTAATGAAT +
Preference number: 3 (lower is better)
Translates to: LETRALLIGSFI*GEICLPFMLMN
Trigger: ATTCATTAGCATGAAAGGCAAGCATATTTCTCCTCATATGAATGAGCCTATCAGCAGGGCTCTAGTTTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGAGTTGGCCCTGGGCAGTaGCAGCTGCTCCTCGTCACC +
Preference number: 4 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRVGPGQ*QLLLVT
Trigger: GGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAAC...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR TCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGCTCCTCCCACTCCTaGAGGACGGCCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRCSSHS*RTAWYP
Trigger: GGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCA...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGCACAACGCCGCTGGTaGGGACCGAGCGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEAQRRW*GPSASA
Trigger: GGCAGATGCGCTCGGTCCTCACCAGCGGCGTTGTGC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGGTTGGCCCTGGGCAGTaGCAGCTGCTCCTCGTCACC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRVGPGQ*QLLLVT
Trigger: GGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAAC...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGAGGACCGAGCGCATCTaGCCACAGCGCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLRTERI*PQRPSR
Trigger: GCGGCTGGGGCGCTGTGGGCAGATGCGCTCGGTCCT...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGACCTGCCCTGCCCCTaGCTGGAGATTGCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEDLPCP*LEIAPC
Trigger: GCAAGGCGCAATCTCCAGGCAGGGGCAGGGCAGGTC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCAGGAAGCATGCGTTTaGGGCCCCCGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRQEACV*GPRSCL
Trigger: CAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAATGCCCTGCCCCTGCCTaGAGATTGCGCCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGECPAPA*RLRLAG
Trigger: CCCTGCAAGGCGCAATCTCCAGGCAGGGGCAGGGCA...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCCCCAGGGAGAACGGTaGGCGCGTCCCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLPQGER*ARPREH
Trigger: GTGTTCCCTGGGACGCGCCCACCGTTCTCCCTGGGG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTTGTCCACCTGCGAGTaGAGGAAGGCCAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRLSTCE*RKARRS
Trigger: CGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAA...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAACGCAGGAAAGAAACGTaGCCAGCTGCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGERRKET*PAASEP
Trigger: CGGCTCGCTGGCAGCTGGGCACGTTTCTTTCCTGCG...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR TCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCCTGCAGCTCCTCCTTaGGCTGTGCGATCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLPAAPP*AVRSAA
Trigger: AGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGCCCATTCCTGAGCTaGTCACTCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRCPFLS*SLLSCS
Trigger: GCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCA...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAACAGGAGGGAAAGTGCTaGCCCCCTCTGCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEQEGKC*PPLQGL
Trigger: CAGTCCTTGCAGAGGGGGGCAGCACTTTCCCTCCTG...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGGCAGCATCGCTGGCTTaGTACTGCCCATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRAASLA*YCPFLS
Trigger: GCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGC...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGGCCAGCAGCATCGCTaGCTTGGTACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEGQQHR*LGTAHS
Trigger: GGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGATTCTCATGCCAGAGGTaGAAGAGTCCTCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRFSCQR*KSPRTG
Trigger: GCCTGTGCGAGGACTCTTCCACCTCTGGCATGAGAA...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR TCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGCTCCTCCCACTCCTaGAGGACGGCCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFCSSHS*RTAWYP
Trigger: GGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTGCTCCTCCCACTCCTaGAGGACGGCCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTCSSHS*RTAWYP
Trigger: GGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCA...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGCCTGCAGCTCCTCCTTaGGCTGTGCGATCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQPAAPP*AVRSAA
Trigger: AGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGG...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGGTACTGCCCATTCCTaGGCTGCTCACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEGTAHS*AAHSSP
Trigger: AGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTGCGCCTTGCAGGGAGTaGCAACGGGCCCCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLAPCRE*QRAPAV
Trigger: GACGGCTGGGGCCCGTTGTCACTCCCTGCAAGGCGC...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGACCACAGGAAGCATaGGTTTGGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTRPQEA*VWGPRS
Trigger: GCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTAGACCACAGGAAGCATaGGTTTGGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPRPQEA*VWGPRS
Trigger: GCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCTGGGCAGTGCCAGCTaGTCCTCGTCACCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLLGSAS*SSSPFG
Trigger: CCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAACTCCTCCTTGAGCTGTaGGATCTGCCGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGELLLEL*DLPLQA
Trigger: AGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAG...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTGCGTCCAGAACCGGTaGCATCCCTCAAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQCVQNR*HPSKPG
Trigger: CCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCACGCTGGAAAACGGTaGGAGCAGGGAGGAACGACC +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLHAGKR*EQGGTT
Trigger: GGTCGTTCCTCCCTGCTCCCACCGTTTTCCAGCGTG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR TCA 90 bp TTGCTTCCCTTCCAGAAGCGGGCTCCAACATCAAGTCCCTTTCCCCGAGAAAATACTCTGTGGCCAGCTTaGCGCCAGCATTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPFQKRAPTSSPFPRENTLWPA*RQHSPL
Trigger: CAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGT...ATTTTCTCGGGGAAAGGGACTTGATGTTGGAGCCCGCTTCTGGAAGGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR TCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCAGGGTCTCCAAGGCTaGTTCAATGGCTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRQGLQG*FNGFHQ
Trigger: TTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTTCAGGAATCAGCCATaGGTCCAGAACCGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRFRNQP*VQNRWH
Trigger: ATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAA...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCGTCACCTTTTGGGGTaGAGGCCAACATGTACAGGA +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRRHLLG*RPTCTG
Trigger: TCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGCTGCTCACGTAGTTaGGGTGCTGCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPGCSRS*GAAPPT
Trigger: AGTGGGAGGAGCAGCACCGCAACTACGTGAGCAGCC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTTGAGCTGTGCGATCTaGCGCTTCAGGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLLSCAI*RFRLLT
Trigger: CGTGAGCAGCCTGAAGCGGCAGATCGCACAGCTCAA...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp TTGCTTCCCTTCCAGAAGCGGGCTCCAACATCAAGTCCCTTTCCCCGAGAAAATGCCAGCATTCACCTCTaGCTTGTCCACCTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LLPFQKRAPTSSPFPRENASIHL*LVHLRV
Trigger: CACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGC...ATTTTCTCGGGGAAAGGGACTTGATGTTGGAGCCCGCTTCTGGAAGGGAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGAAAAAGAGAAGGACGTTaGTTCCCTTCCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRKREGR*FPSRSG
Trigger: CCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTT...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTCAGCCTGAGCAAGGCTaGGGATCCCAGAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPQPEQG*GSQNKP
Trigger: GGGCTTGTTCTGGGATCCGCAGCCTTGCTCAGGCTG...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGAGTGAGCAGAGTTCGTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLSEQSS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACGAACTCTGCTCACT...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCCTAACTCGCAGCTCTaGTTCCAATGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRPNSQL*FQCSDS
Trigger: GCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCGCAGGAAAGAAACGTaGCCAGCTGCCAGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFRRKET*PAASEP
Trigger: CGGCTCGCTGGCAGCTGGGCACGTTTCTTTCCTGCG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGCGTCCAGAACCGGTaGCATCCCTCAAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFCVQNR*HPSKPG
Trigger: CCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGTAAGGACGGTGATTaGGGCTGTTCTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRCKDGD*GCSLQD
Trigger: GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACA...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTATGCCCAGCTGGCCGTaGGATGCCTCGTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTMPSWP*DASFMA
Trigger: GGCCATGAACGAGGCATCCCACGGCCAGCTGGGCAT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGGTACTGCCCATTCCTaGGCTGCTCACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQGTAHS*AAHSSP
Trigger: AGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGCCTCTATCTCGTGCCTaGACACCAGCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQPLSRA*TPACPA
Trigger: AGCTGGGCATGCTGGTGTTCAGGCACGAGATAGAGG...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGACTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRLCLNA*HSVPDR
Trigger: TCTGTCAGGCACTGAATGTCAGGCATTGAGACATAG...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCTGGGCAGTGCCAGCTaGTCCTCGTCACCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFLGSAS*SSSPFG
Trigger: CCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTTCTGCCGCTTCAGGCTaGTCACGTAGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPSAASG*SRSCGA
Trigger: AGCACCGCAACTACGTGAGCAGCCTGAAGCGGCAGA...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLSLAWY*PFLSCS
Trigger: TGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGA...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTGTCCACCTGCGAGTaGAGGAAGGCCAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTLSTCE*RKARRS
Trigger: CGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAA...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGCCAGCATTCACCTCTaGCTTGTCCACCTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQASIHL*LVHLRV
Trigger: CACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGCTATCGAAAGGCACTaGTGCATACTCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEAIERH*CILCGQ
Trigger: CTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGGCAGGCCTGAAATTCTaGATGAACTGCCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRAGLKF*MNCRNL
Trigger: CAAGTTCCGGCAGTTCATGCAGAATTTCAGGCCTGC...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCAGGAGGGAAAGTGCTaGCCCCCTCTGCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTQEGKC*PPLQGL
Trigger: CAGTCCTTGCAGAGGGGGGCAGCACTTTCCCTCCTG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTCAGGAAGCATGCGTTTaGGGCCCCCGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFQEACV*GPRSCL
Trigger: CAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTG...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATATGCCCAGCTGGCCGTaGGATGCCTCGTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDMPSWP*DASFMA
Trigger: GGCCATGAACGAGGCATCCCACGGCCAGCTGGGCAT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATACCAGCATGCCCAGCTaGCCGTGGGATGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDTSMPS*PWDASF
Trigger: GAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTACCAGCATGCCCAGCTaGCCGTGGGATGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVTSMPS*PWDASF
Trigger: GAACGAGGCATCCCACGGCCAGCTGGGCATGCTGGT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCGCTGAAGTCACACTaGGGTTTCCAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPALKSH*GFQVGV
Trigger: GACCCCAACCTGGAAACCCCAGTGTGACTTCAGCGC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTCCTGCAGCTCCTCCTTaGGCTGTGCGATCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLPAAPP*AVRSAA
Trigger: AGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGG...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTACTCTGTGGCCAGCTTaGCGCCAGCATTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTTLWPA*RQHSPL
Trigger: CAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TGCTGTTCCAAGGGAGGGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGGCGTCCGTACCACTATaGGGTTGCTGTGGAGATACT +
Preference number: 4 (lower is better)
Translates to: CCSKGGTASWWPYIMPGLASVPL*GCCGDT
Trigger: AGTATCTCCACAGCAACCTCATAGTGGTACGGACGC...CAATCCTGGCATAATATACGGCCACCATGATGCAGTCCCTCCCTTGGAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGGGGCCCCCGGAGCTaGTTGCATCCATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFWGPRS*LHPFPS
Trigger: AGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACCTGGGCAGTGCCAGCTaGTCCTCGTCACCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYLGSAS*SSSPFG
Trigger: CCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAG...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGGCTGCTCACGTAGTTaGGGTGCTGCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDGCSRS*GAAPPT
Trigger: AGTGGGAGGAGCAGCACCGCAACTACGTGAGCAGCC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTTGAGCTGTGCGATCTaGCGCTTCAGGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFLSCAI*RFRLLT
Trigger: CGTGAGCAGCCTGAAGCGGCAGATCGCACAGCTCAA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGCCCATTCCTGAGCTaGTCACTCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFCPFLS*SLLSCS
Trigger: GCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTCAGCTGGCCGTGGGATaGCTCGTTCATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFQLAVG*LVHGLG
Trigger: TCCAAGGCCATGAACGAGGCATCCCACGGCCAGCTG...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCAGCTCTGCTTCCAATaGTCTGACAGCGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLQLCFQ*SDSAEV
Trigger: GACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTTGCGTCCAGAACCGGTaGCATCCCTCAAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLCVQNR*HPSKPG
Trigger: CCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCA...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTA +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLLLVTF*GAGQHV
Trigger: TACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAG...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTGCAGCATCGCTGGCTTaGTACTGCCCATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFAASLA*YCPFLS
Trigger: GCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGC...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGCCAGCAGCATCGCTaGCTTGGTACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFGQQHR*LGTAHS
Trigger: GGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGGCCAGCAGCATCGCTaGCTTGGTACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLGQQHR*LGTAHS
Trigger: GGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCC...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGGGATGCCTCGTTCATaGCCTTGGACTGCATGCACA +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTGMPRS*PWTACT
Trigger: TGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCC...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTCACGCTGGAAAACGGTaGGAGCAGGGAGGAACGACC +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCHAGKR*EQGGTT
Trigger: GGTCGTTCCTCCCTGCTCCCACCGTTTTCCAGCGTG...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR TCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTGCTCCTCCCACTCCTaGAGGACGGCCTGGTACCCC +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLCSSHS*RTAWYP
Trigger: GGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGCA...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGTACTGCCCATTCCTaGGCTGCTCACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFGTAHS*AAHSSP
Trigger: AGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACGGTACTGCCCATTCCTaGGCTGCTCACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYGTAHS*AAHSSP
Trigger: AGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACC...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTACTCTGTGGCCAGCTTaGCGCCAGCATTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFTLWPA*RQHSPL
Trigger: CAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCAAAGTAAACAACAGTaGGATGGACTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRQSKQQ*DGLSHP
Trigger: AGGATGGGAGAGTCCATCTCACTGTTGTTTACTTTG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGCGTCCGTACCACTATaGGGTTGCTGTGGAGATACT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQASVPL*GCCGDT
Trigger: AGTATCTCCACAGCAACCTCATAGTGGTACGGACGC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTTCTGTTTGCGAAGGTaGGCCTCTATCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQFCLRR*ASISCL
Trigger: CAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTLGVFP*NRKAAP
Trigger: CGGAGCTGCCTTCCTATTTCAAGGAAAGACGCCAAG...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTACCTGTTGTCACCCCTaGCCGGGGACGTATGGTCTT +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFTCCHP*PGTYGL
Trigger: AAGACCATACGTCCCCGGGCAGGGGTGACAACAGGT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR GCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACTGGGGCCCCCGGAGCTaGTTGCATCCATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYWGPRS*LHPFPS
Trigger: AGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCA...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTTGGGGCCCCCGGAGCTaGTTGCATCCATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFWGPRS*LHPFPS
Trigger: AGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCA...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTTCAGGAATCAGCCATaGGTCCAGAACCGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQFRNQP*VQNRWH
Trigger: ATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTCGTCACCTTTTGGGGTaGAGGCCAACATGTACAGGA +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPRHLLG*RPTCTG
Trigger: TCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACG...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGGTTGGCCCTGGGCAGTaGCAGCTGCTCCTCGTCACC +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLVGPGQ*QLLLVT
Trigger: GGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAAC...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTCTGCCGCTTCAGGCTaGTCACGTAGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCSAASG*SRSCGA
Trigger: AGCACCGCAACTACGTGAGCAGCCTGAAGCGGCAGA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATCTCCTCCTTGAGCTGTaGGATCTGCCGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDLLLEL*DLPLQA
Trigger: AGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAG...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTTGCCCATTCCTGAGCTaGTCACTCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFCPFLS*SLLSCS
Trigger: GCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCA...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTATTGGGGCTGTTCTCTaGAGGACTGTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPIGAVL*RTVQGL
Trigger: GAGACCCTGAACAGTCCTGCAGAGAACAGCCCCAAT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTTGGACTCTCCCATCCTaGTCAATGCACATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPWTLPS*SMHISL
Trigger: CAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCA...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGGGTCAGCTCGTCCATaGAGCGCTTCTCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDGSARP*SASHAR
Trigger: TCTGGCATGAGAAGCGCTGCATGGACGAGCTGACCC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGGGTCAGCTCGTCCATaGAGCGCTTCTCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLGSARP*SASHAR
Trigger: TCTGGCATGAGAAGCGCTGCATGGACGAGCTGACCC...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGGGTCAGCTCGTCCATaGAGCGCTTCTCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVGSARP*SASHAR
Trigger: TCTGGCATGAGAAGCGCTGCATGGACGAGCTGACCC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGCCTCCAGTGTTCAGTTaGTCCTCTTCGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRPPVFS*SSSKIL
Trigger: GAGTATTTTCGAAGAGGAGCAACTGAACACTGGAGG...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGAGGAAGGCAGCTCCGTaGAATTCGGGGCCACACCAA +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLRKAAP*NSGPHQ
Trigger: TTGGTGTGGCCCCGAATTGCACGGAGCTGCCTTCCT...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLGKVRR*LHHCSS
Trigger: AGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATGGCCAGCAGCATCGCTaGCTTGGTACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINGQQHR*LGTAHS
Trigger: GGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCC...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGAGGCCAGTCTCCAGCTaGTACACCTTCTGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLRPVSS*YTFCRV
Trigger: TACTCTACAGAAGGTGTACCAGCTGGAGACTGGCCT...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGTGTAAGGACGGTGATTaGGGCTGTTCTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTCKDGD*GCSLQD
Trigger: GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACA...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACCAGCAAGAGGGGACCTaGGGGTTCAAGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYQQEGT*GFKKGR
Trigger: CCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTG...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR TCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGACCTGCAGCTCCTCCTTaGGCTGTGCGATCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERPAAPP*AVRSAA
Trigger: AGCGGCAGATCGCACAGCTCAAGGAGGAGCTGCAGG...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTACTCTGTGGCCAGCTTaGCGCCAGCATTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLTLWPA*RQHSPL
Trigger: CAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGT...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGTAGATCCCTTCTATaGAATCAGAGGCCGTGTAAG +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLGRSLL*NQRPCK
Trigger: CTTACACGGCCTCTGATTTCATAGAAGGGATCTACC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATCTCCGCCCCAGCCTTTaGTGTCCAGATCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDLRPSL*CPDQTH
Trigger: GTGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAG...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTGCGTCCGTACCACTATaGGGTTGCTGTGGAGATACT +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFASVPL*GCCGDT
Trigger: AGTATCTCCACAGCAACCTCATAGTGGTACGGACGC...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPLGVFP*NRKAAQ
Trigger: TTGGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAG...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTAGACCACAGGAAGCATaGGTTTGGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCRPQEA*VWGPRS
Trigger: GCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCT...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGGGCTGCTCACGTAGTTaGGGTGCTGCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVGCSRS*GAAPPT
Trigger: AGTGGGAGGAGCAGCACCGCAACTACGTGAGCAGCC...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATCTCCTCCTTGAGCTGTaGGATCTGCCGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINLLLEL*DLPLQA
Trigger: AGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAG...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCSLAWY*PFLSCS
Trigger: TGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTTTGTCCACCTGCGAGTaGAGGAAGGCCAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASILSTCE*RKARRS
Trigger: CGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAA...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTGCCAGCATTCACCTCTaGCTTGTCCACCTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLASIHL*LVHLRV
Trigger: CACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGC...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGGAAGCATGCGTTTaGGGCCCCCGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCQEACV*GPRSCL
Trigger: CAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTG...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTA +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFLLVTF*GAGQHV
Trigger: TACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATGCAGCATCGCTGGCTTaGTACTGCCCATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINAASLA*YCPFLS
Trigger: GCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGC...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTCCAAGGCTGATTCAATaGCTTCCACCAACTCATCCC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPPRLIQ*LPPTHP
Trigger: GGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGG...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGCCTCGTTCATGGCCTTaGACTGCATGCACATCTTGT +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQPRSWP*TACTSC
Trigger: ACAAGATGTGCATGCAGTCCAAGGCCATGAACGAGG...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTCAGCAAGAGGGGACCTaGGGGTTCAAGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLQQEGT*GFKKGR
Trigger: CCTTCCCTTCTTGAACCCCCAGGTCCCCTCTTGCTG...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTCAGGCAAGTCACTTCTaGGCACTGCTAAGAGAACGC +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFQASHF*ALLRER
Trigger: GCGTTCTCTTAGCAGTGCTCAGAAGTGACTTGCCTG...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR TCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTCTCCGCCCCAGCCTTTaGTGTCCAGATCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASILRPSL*CPDQTH
Trigger: GTGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAG...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCCATTCAGCTGGATGAAGGTAAAGTTCCTGAAGTTGGCAGCTTTGGAAGTGTTCTGTTTGCGAAGGTaGGCCTCTATCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPFSWMKVKFLKLAALEVFCLRR*ASISCL
Trigger: CAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAA...CACTTCCAAAGCTGCCAACTTCAGGAACTTTACCTTCATCCAGCTGAATGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR TCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTTGCGAAGGTaGGCCTCTATCTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDFCLRR*ASISCL
Trigger: CAGGCACGAGATAGAGGCTCACCTTCGCAAACAGAA...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTLGVFP*NRKAAQ
Trigger: TTGGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAAGACCACAGGAAGCATaGGTTTGGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISRPQEA*VWGPRS
Trigger: GCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCT...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGGCTGCTCACGTAGTTaGGGTGCTGCTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEGCSRS*GAAPPT
Trigger: AGTGGGAGGAGCAGCACCGCAACTACGTGAGCAGCC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGTCTGCCGCTTCAGGCTaGTCACGTAGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVSAASG*SRSCGA
Trigger: AGCACCGCAACTACGTGAGCAGCCTGAAGCGGCAGA...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTATCGAAAGGCACTGCTaGATACTCTGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTIERHC*ILCGQL
Trigger: AAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGAT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCTATCGAAAGGCACTaGTGCATACTCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFAIERH*CILCGQ
Trigger: CTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCTCCATTCAGCTGGATGAAGGTAAAGTTCCTGAAGTTGGCAGCTTTGGAAGTGATTGGGGCTGTTCTCTaGAGGACTGTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SPFSWMKVKFLKLAALEVIGAVL*RTVQGL
Trigger: GAGACCCTGAACAGTCCTGCAGAGAACAGCCCCAAT...CACTTCCAAAGCTGCCAACTTCAGGAACTTTACCTTCATCCAGCTGAATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACATTGGGGCTGTTCTCTaGAGGACTGTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYIGAVL*RTVQGL
Trigger: GAGACCCTGAACAGTCCTGCAGAGAACAGCCCCAAT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGGACTCTCCCATCCTaGTCAATGCACATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCWTLPS*SMHISL
Trigger: CAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTTGGCCTTGGACTGCATaGACATCTTGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFWPWTA*TSCTAR
Trigger: CCGAGCAGTACAAGATGTGCATGCAGTCCAAGGCCA...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGACAGCTGGCCGTGGGATaGCTCGTTCATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERQLAVG*LVHGLG
Trigger: TCCAAGGCCATGAACGAGGCATCCCACGGCCAGCTG...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGAGTGAGCAGAGTTCGTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVSEQSS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACGAACTCTGCTCACT...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCACAGGAAGCATGCGTTTaGGGCCCCCGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSQEACV*GPRSCL
Trigger: CAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTG...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTA +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYLLVTF*GAGQHV
Trigger: TACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAG...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTGTAAGGACGGTGATTaGGGCTGTTCTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDCKDGD*GCSLQD
Trigger: GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACA...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATTTCTCATGCCAGAGGTaGAAGAGTCCTCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDFSCQR*KSPRTG
Trigger: GCCTGTGCGAGGACTCTTCCACCTCTGGCATGAGAA...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAATGCCCAGCTGGCCGTaGGATGCCTCGTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSMPSWP*DASFMA
Trigger: GGCCATGAACGAGGCATCCCACGGCCAGCTGGGCAT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCCACCTGGCCTGGGGTaGATAACATGTAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTPPGLG*ITCSKN
Trigger: GTTTTTGCTACATGTTATCCACCCCAGGCCAGGTGG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGCAGCAGCAAGAGCTaGATTGGTCTCACTACTAGT +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTSSSKS*IGLTTS
Trigger: ACTAGTAGTGAGACCAATCCAGCTCTTGCTGCTGCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR TCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGCGTGTTGGCCATGTTaGGCTTTTCATTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLACWPC*AFHFSL
Trigger: AAGTGAAAAATGAAAAGCTCAACATGGCCAACACGC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGCAAAGTAAACAACAGTaGGATGGACTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTQSKQQ*DGLSHP
Trigger: AGGATGGGAGAGTCCATCTCACTGTTGTTTACTTTG...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCAGTTTCCTTCTTTATaGCCAGCTGCTGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTQFPSL*PAAVPR
Trigger: CCTTGGAACAGCAGCTGGTCATAAAGAAGGAAACTG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGCTCCGCCCCAGCCTTTaGTGTCCAGATCAAACCCAC +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLLRPSL*CPDQTH
Trigger: GTGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAG...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGCCTCTATCTCGTGCCTaGACACCAGCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEPLSRA*TPACPA
Trigger: AGCTGGGCATGCTGGTGTTCAGGCACGAGATAGAGG...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTLCLNA*HSVPDR
Trigger: TCTGTCAGGCACTGAATGTCAGGCATTGAGACATAG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCACACCAATGCACAGCCTaGGCAAGGCTGCGGATCCCA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISHQCTA*ARLRIP
Trigger: TGGGATCCGCAGCCTTGCTCAGGCTGTGCATTGGTG...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCACTGGGCAGTGCCAGCTaGTCCTCGTCACCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSLGSAS*SSSPFG
Trigger: CCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAG...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAGTTGGCCCTGGGCAGTaGCAGCTGCTCCTCGTCACC +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQVGPGQ*QLLLVT
Trigger: GGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAAC...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTCTGCCGCTTCAGGCTaGTCACGTAGTTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLSAASG*SRSCGA
Trigger: AGCACCGCAACTACGTGAGCAGCCTGAAGCGGCAGA...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTTTGAGCTGTGCGATCTaGCGCTTCAGGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCLSCAI*RFRLLT
Trigger: CGTGAGCAGCCTGAAGCGGCAGATCGCACAGCTCAA...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGTTGAGCTGTGCGATCTaGCGCTTCAGGCTGCTCACG +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLLSCAI*RFRLLT
Trigger: CGTGAGCAGCCTGAAGCGGCAGATCGCACAGCTCAA...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTGCCAGCATTCACCTCTaGCTTGTCCACCTGCGAGTG +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCASIHL*LVHLRV
Trigger: CACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGC...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACATCGAAAGGCACTGCTaGATACTCTGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYIERHC*ILCGQL
Trigger: AAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGAT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCACAGCTGGCCGTGGGATaGCTCGTTCATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISQLAVG*LVHGLG
Trigger: TCCAAGGCCATGAACGAGGCATCCCACGGCCAGCTG...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGATCTCACAAGCATTCTaGCTTTGTCAGACACTTCAC +
Preference number: 4 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLISQAF*LCQTLH
Trigger: GTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGAT...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp TGCTGTTCCAAGGGAGGGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGATGCCTGACATTCAGTaGCTGACAGAATCAGCATTT +
Preference number: 4 (lower is better)
Translates to: CCSKGGTASWWPYIMPGLMPDIQ*LTESAF
Trigger: AAATGCTGATTCTGTCAGGCACTGAATGTCAGGCAT...CAATCCTGGCATAATATACGGCCACCATGATGCAGTCCCTCCCTTGGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATCCTAACTCGCAGCTCTaGTTCCAATGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDPNSQL*FQCSDS
Trigger: GCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGG...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGACTGCCCGGGGACGTATaGTCTTTCCCGGTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERLPGDV*SFPVFA
Trigger: AGCAAAGACCGGGAAAGACCATACGTCCCCGGGCAG...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFGKVRR*LHHCSS
Trigger: AGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTGCGTCCAGAACCGGTaGCATCCCTCAAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCCVQNR*HPSKPG
Trigger: CCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGAGGCCAGTCTCCAGCTaGTACACCTTCTGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLRPVSS*YTFCRV
Trigger: TACTCTACAGAAGGTGTACCAGCTGGAGACTGGCCT...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTAGGCCAGTCTCCAGCTaGTACACCTTCTGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCRPVSS*YTFCRV
Trigger: TACTCTACAGAAGGTGTACCAGCTGGAGACTGGCCT...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQFTGCN*VTFAGK
Trigger: TTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGACAGAATCAGCATTTaGCATGTCCTTGGATATGGC +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPDRISI*HVLGYG
Trigger: GCCATATCCAAGGACATGCCAAATGCTGATTCTGTC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCTCCATTTCTTCTTATaGAAGCCAGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFLHFFL*KPEARR
Trigger: CCTCCTGGCTTCTGGCTTCCATAAGAAGAAATGGAG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTCCACCTGGCCTGGGGTaGATAACATGTAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCPPGLG*ITCSKN
Trigger: GTTTTTGCTACATGTTATCCACCCCAGGCCAGGTGG...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCCACCTGGCCTGGGGTaGATAACATGTAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVPPGLG*ITCSKN
Trigger: GTTTTTGCTACATGTTATCCACCCCAGGCCAGGTGG...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAGGGTCTCCAAGGCTaGTTCAATGGCTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVQGLQG*FNGFHQ
Trigger: TTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTCATTTTTCACTTTCATaGTGGGGCCGAATGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTHFSLS*WGRMVE
Trigger: TTCGACCATTCGGCCCCATCATGAAAGTGAAAAATG...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVANMCI*AITASK
Trigger: CTTAGAAGCTGTGATGGCTCAGATGCACATATTGGC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCATGCCCATTCCTGAGCTaGTCACTCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISCPFLS*SLLSCS
Trigger: GCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCA...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGTCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLSLAWY*PFLSCS
Trigger: TGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGA...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGTCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRSLAWY*PFLSCS
Trigger: TGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGA...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTTGTCCACCTGCGAGTaGAGGAAGGCCAGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCLSTCE*RKARRS
Trigger: CGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTATCGAAAGGCACTGCTaGATACTCTGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLIERHC*ILCGQL
Trigger: AAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGAT...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGTGGACTCTCCCATCCTaGTCAATGCACATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVWTLPS*SMHISL
Trigger: CAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCA...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATAAAAGAGAAGGACGTTaGTTCCCTTCCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDKREGR*FPSRSG
Trigger: CCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTT...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTTTCTTTATGACCAGCTaGTGTTCCAAGGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVFFMTS*CSKGGT
Trigger: AGTCCCTCCCTTGGAACAGCAGCTGGTCATAAAGAA...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTGCTGTGGAGATACTTaGGATAAAGGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTCCGDT*DKGAHP
Trigger: AGGATGTGCACCTTTATCGCAAGTATCTCCACAGCA...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTACATTTTATGCCTACTaGTCCCTTTATGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFTFYAY*SLYVWG
Trigger: CCCCCAGACATAAAGGGAGCAGTAGGCATAAAATGT...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAGCAGCATCGCTGGCTTaGTACTGCCCATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISAASLA*YCPFLS
Trigger: GCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGC...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATCCAAGGCTGATTCAATaGCTTCCACCAACTCATCCC +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINPRLIQ*LPPTHP
Trigger: GGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGG...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATGGGACTGCATCATGGTaGCCGTATATTATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDGTASW*PYIMPG
Trigger: TCCTGGCATAATATACGGCCACCATGATGCAGTCCC...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTCCTCGTTCATGGCCTTaGACTGCATGCACATCTTGT +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLPRSWP*TACTSC
Trigger: ACAAGATGTGCATGCAGTCCAAGGCCATGAACGAGG...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGGGGATGCCTCGTTCATaGCCTTGGACTGCATGCACA +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRGMPRS*PWTACT
Trigger: TGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCC...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGGGATGCCTCGTTCATaGCCTTGGACTGCATGCACA +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEGMPRS*PWTACT
Trigger: TGTGCATGCAGTCCAAGGCCATGAACGAGGCATCCC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTGACAGAATCAGCATTTaGCATGTCCTTGGATATGGC +
Preference number: 4 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFDRISI*HVLGYG
Trigger: GCCATATCCAAGGACATGCCAAATGCTGATTCTGTC...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATTCAGTTACTTCCACCTaGCCTGGGGTGGATAACATG +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDSVTST*PGVDNM
Trigger: CATGTTATCCACCCCAGGCCAGGTGGAAGTAACTGA...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGACCGGACCGGCAGATaGTCAGCTCCCCACATTTTA +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEDRTGR*SAPHIL
Trigger: TAAAATGTGGGGAGCTGACCATCTGCCGGTCCGGTC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR TCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGCAGGGTCTCCAAGGCTaGTTCAATGGCTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLQGLQG*FNGFHQ
Trigger: TTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTG...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLANMCI*AITASK
Trigger: CTTAGAAGCTGTGATGGCTCAGATGCACATATTGGC...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCGTCACCTTTTGGGGTaGAGGCCAACATGTACAGGA +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCRHLLG*RPTCTG
Trigger: TCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACG...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGGCTATCGAAAGGCACTaGTGCATACTCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRAIERH*CILCGQ
Trigger: CTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGC...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGATTGGGGCTGTTCTCTaGAGGACTGTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEIGAVL*RTVQGL
Trigger: GAGACCCTGAACAGTCCTGCAGAGAACAGCCCCAAT...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTATCTCCCTGAAATTCTaGATGAACTGCCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFISLKF*MNCRNL
Trigger: CAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAGAT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332246.10
ENST00000454498.6
CDS-3UTR GCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTTGCTGTGGAGATACTTaGGATAAAGGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVCCGDT*DKGAHP
Trigger: AGGATGTGCACCTTTATCGCAAGTATCTCCACAGCA...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGTGGCCTTGGACTGCATaGACATCTTGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLWPWTA*TSCTAR
Trigger: CCGAGCAGTACAAGATGTGCATGCAGTCCAAGGCCA...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTCCTCCAGTGTTCAGTTaGTCCTCTTCGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFPPVFS*SSSKIL
Trigger: GAGTATTTTCGAAGAGGAGCAACTGAACACTGGAGG...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGCTCATGCATCTGGTaGTGGCTAATAATTTTCACA +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTSSCIW*WLIIFT
Trigger: TGTGAAAATTATTAGCCAGCACCAGATGCATGAGCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGAGATAATTAGCTCATaGATCTGGTGCTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQEIISS*IWCWLI
Trigger: TATTAGCCAGCACCAGATGCATGAGCTAATTATCTC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGAGATAATTAGCTCATaGATCTGGTGCTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTEIISS*IWCWLI
Trigger: TATTAGCCAGCACCAGATGCATGAGCTAATTATCTC...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGCAGCTCTGCTTCCAATaGTCTGACAGCGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEQLCFQ*SDSAEV
Trigger: GACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTG...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACCTCTCTAGTAAATCCTaGCATAACTGGGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYLSSKS*HNWGFK
Trigger: CTTGAACCCCCAGTTATGCCAGGATTTACTAGAGAG...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTA +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLLLVTF*GAGQHV
Trigger: TACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAG...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTAAATACCTTCTTCCCTaGCTGTGTATTCAGCCTACA +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTKYLLP*LCIQPT
Trigger: TGTAGGCTGAATACACAGCCAGGGAAGAAGGTATTT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TTGCTTCCCTTCCAGAAGCGGGCTCCAACATCAAGTCCCTTTCCCCGAGAAAATTTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLPFQKRAPTSSPFPRENFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...ATTTTCTCGGGGAAAGGGACTTGATGTTGGAGCCCGCTTCTGGAAGGGAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 4 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp TTGCTTCCCTTCCAGAAGCGGGCTCCAACATCAAGTCCCTTTCCCCGAGAAAATATTAGCTCATGCATCTaGTGCTGGCTAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: LLPFQKRAPTSSPFPRENISSCI*CWLIIF
Trigger: GAAAATTATTAGCCAGCACCAGATGCATGAGCTAAT...ATTTTCTCGGGGAAAGGGACTTGATGTTGGAGCCCGCTTCTGGAAGGGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTGCGCTGAAGTCACACTaGGGTTTCCAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCALKSH*GFQVGV
Trigger: GACCCCAACCTGGAAACCCCAGTGTGACTTCAGCGC...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR TCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGGCAGAAGCAATGACTaGAGTGAAATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDGRSND*SEISKF
Trigger: AAACTTGGAGATTTCACTTCAGTCATTGCTTCTGCC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGGCAGAAGCAATGACTaGAGTGAAATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVGRSND*SEISKF
Trigger: AAACTTGGAGATTTCACTTCAGTCATTGCTTCTGCC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTCTACTTTTAAAGGATaGTCTTGCAGGCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTSTFKG*SCRQKQ
Trigger: TTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGA...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCACAGGGTCTCCAAGGCTaGTTCAATGGCTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSQGLQG*FNGFHQ
Trigger: TTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTG...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTGGTAGATCCCTTCTATaGAATCAGAGGCCGTGTAAG +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASIGRSLL*NQRPCK
Trigger: CTTACACGGCCTCTGATTTCATAGAAGGGATCTACC...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTCATTTTTCACTTTCATaGTGGGGCCGAATGGTCGAA +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLHFSLS*WGRMVE
Trigger: TTCGACCATTCGGCCCCATCATGAAAGTGAAAAATG...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTGCGTGTTGGCCATGTTaGGCTTTTCATTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVACWPC*AFHFSL
Trigger: AAGTGAAAAATGAAAAGCTCAACATGGCCAACACGC...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCTATGTCTCAATGCCTaGCATTCAGTGCCTGACAGA +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVLCLNA*HSVPDR
Trigger: TCTGTCAGGCACTGAATGTCAGGCATTGAGACATAG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTATCACCAGTCTGAATaGGTTTCCTTTTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQYHQSE*VSFSVK
Trigger: CTTTACAGAAAAGGAAACTCATTCAGACTGGTGATA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGGTCTTTCCCGGTCTTTaGTGTCAGTACTCTACTCCC +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLVFPGL*CQYSTP
Trigger: GGGAGTAGAGTACTGACAGCAAAGACCGGGAAAGAC...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR GCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCACGTCACCTTTTGGGGTaGAGGCCAACATGTACAGGA +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSRHLLG*RPTCTG
Trigger: TCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACG...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAACTCCTCCTTGAGCTGTaGGATCTGCCGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQLLLEL*DLPLQA
Trigger: AGCCTGAAGCGGCAGATCGCACAGCTCAAGGAGGAG...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAGCTATCGAAAGGCACTaGTGCATACTCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSAIERH*CILCGQ
Trigger: CTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGC...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLKFCMN*RNLSTL
Trigger: AAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTT...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR GCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATCAACTGGGTTACTTTTaGAGGCAAAGCGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDQLGYF*RQSGDF
Trigger: AAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTG...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERGKVRR*LHHCSS
Trigger: AGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCC...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEGKVRR*LHHCSS
Trigger: AGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGCCAAGGCTGATTCAATaGCTTCCACCAACTCATCCC +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLPRLIQ*LPPTHP
Trigger: GGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGG...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGACCAAGGCTGATTCAATaGCTTCCACCAACTCATCCC +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERPRLIQ*LPPTHP
Trigger: GGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGG...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCATGTAAGGACGGTGATTaGGGCTGTTCTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISCKDGD*GCSLQD
Trigger: GTCCTGCAGAGAACAGCCCCAATCACCGTCCTTACA...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTAAATACCTTCTTCCCTaGCTGTGTATTCAGCCTACA +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVKYLLP*LCIQPT
Trigger: TGTAGGCTGAATACACAGCCAGGGAAGAAGGTATTT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGGGACTGCATCATGGTaGCCGTATATTATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEGTASW*PYIMPG
Trigger: TCCTGGCATAATATACGGCCACCATGATGCAGTCCC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGCCTCGTTCATGGCCTTaGACTGCATGCACATCTTGT +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRPRSWP*TACTSC
Trigger: ACAAGATGTGCATGCAGTCCAAGGCCATGAACGAGG...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINFTGCN*VTFAGK
Trigger: TTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCTCCATTTCTTCTTATaGAAGCCAGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVLHFFL*KPEARR
Trigger: CCTCCTGGCTTCTGGCTTCCATAAGAAGAAATGGAG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCCACATCACAGAAAAAGAGAAGGACGTTGCTTCCCTTCCAGAAGCGGGCTCCACTAGATTCTGGCAGATaGATTGATCTTTCACAATAT +
Preference number: 4 (lower is better)
Translates to: STSQKKRRTLLPFQKRAPLDSGR*IDLSQY
Trigger: ATATTGTGAAAGATCAATCCATCTGCCAGAATCTAG...TGGAGCCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTTCTGTGATGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGATCAGTTACTTCCACCTaGCCTGGGGTGGATAACATG +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERSVTST*PGVDNM
Trigger: CATGTTATCCACCCCAGGCCAGGTGGAAGTAACTGA...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CAA 72 bp CTTATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTaGAAAAGAGATTGTTTGGTTCACACGGTATACTTT +
Preference number: 4 (lower is better)
Translates to: LMEARSQEEHPV*KRDCLVHTVYF
Trigger: AAAGTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCACTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISLGVFP*NRKAAT
Trigger: TGTGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAG...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR TCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACTCTACTTTTAAAGGATaGTCTTGCAGGCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYSTFKG*SCRQKQ
Trigger: TTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGA...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGGGTAGATCCCTTCTATaGAATCAGAGGCCGTGTAAG +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLGRSLL*NQRPCK
Trigger: CTTACACGGCCTCTGATTTCATAGAAGGGATCTACC...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGAAGTCTGACCGATACTaGCACGTCATCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEKSDRY*HVIPNP
Trigger: TGGATTTGGGATGACGTGTCAGTATCGGTCAGACTT...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTTATATTGATGAAGTCTaGCCGATACTGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVYIDEV*PILTRH
Trigger: ATGACGTGTCAGTATCGGTCAGACTTCATCAATATA...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTACGATATCACCAGTCTaGATGAGTTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFTISPV*MSFLFC
Trigger: ACAGAAAAGGAAACTCATTCAGACTGGTGATATCGT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATACGATATCACCAGTCTaGATGAGTTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDTISPV*MSFLFC
Trigger: ACAGAAAAGGAAACTCATTCAGACTGGTGATATCGT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTTCAGGAATCAGCCATaGGTCCAGAACCGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCFRNQP*VQNRWH
Trigger: ATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAATCGAAAGGCACTGCTaGATACTCTGTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSIERHC*ILCGQL
Trigger: AAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGAT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTTCTTTATGACCAGCTaGTGTTCCAAGGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLFFMTS*CSKGGT
Trigger: AGTCCCTCCCTTGGAACAGCAGCTGGTCATAAAGAA...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTGGCCTTGGACTGCATaGACATCTTGTACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCWPWTA*TSCTAR
Trigger: CCGAGCAGTACAAGATGTGCATGCAGTCCAAGGCCA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGAGACACTTCACAGGGTaGAACTGGGTTACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVRHFTG*NWVTFA
Trigger: TGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCT...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATAGCTCATGCATCTGGTaGTGGCTAATAATTTTCACA +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDSSCIW*WLIIFT
Trigger: TGTGAAAATTATTAGCCAGCACCAGATGCATGAGCT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAAGGCCAGTCTCCAGCTaGTACACCTTCTGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSRPVSS*YTFCRV
Trigger: TACTCTACAGAAGGTGTACCAGCTGGAGACTGGCCT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTAATTCTCCATTCAGCTaGATGAAGGTAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVNSPFS*MKVKFL
Trigger: CAGGAACTTTACCTTCATCCAGCTGAATGGAGAATT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGCTCCATTTCTTCTTATaGAAGCCAGAAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRLHFFL*KPEARR
Trigger: CCTCCTGGCTTCTGGCTTCCATAAGAAGAAATGGAG...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCATGCTCCCTTTATGTCTaGGGGTTCAAGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISCSLYV*GFKKGR
Trigger: CCTTCCCTTCTTGAACCCCCAGACATAAAGGGAGCA...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR TCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTCTACTTTTAAAGGATaGTCTTGCAGGCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINSTFKG*SCRQKQ
Trigger: TTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGA...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTTCTACTTTTAAAGGATaGTCTTGCAGGCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: NHLAGYPQPICASEPSQLSTFKG*SCRQKQ
Trigger: TTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGA...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR TCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGCATTTTTCACTTTCATaGTGGGGCCGAATGGTCGAA +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLHFSLS*WGRMVE
Trigger: TTCGACCATTCGGCCCCATCATGAAAGTGAAAAATG...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGCAAAGTAAACAACAGTaGGATGGACTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLQSKQQ*DGLSHP
Trigger: AGGATGGGAGAGTCCATCTCACTGTTGTTTACTTTG...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCACAGTTTCCTTCTTTATaGCCAGCTGCTGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSQFPSL*PAAVPR
Trigger: CCTTGGAACAGCAGCTGGTCATAAAGAAGGAAACTG...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAAAGTCTGACCGATACTaGCACGTCATCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISKSDRY*HVIPNP
Trigger: TGGATTTGGGATGACGTGTCAGTATCGGTCAGACTT...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGAGGCTTTCTCATCTCTaGCCCATCAGTCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLRLSHL*PISPIL
Trigger: AAGAATTGGACTGATGGGTCAGAGATGAGAAAGCCT...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTATCACCAGTCTGAATaGGTTTCCTTTTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDYHQSE*VSFSVK
Trigger: CTTTACAGAAAAGGAAACTCATTCAGACTGGTGATA...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTAGAAAATGTGGTTTCTaGCTTTTAGGTACATCACGA +
Preference number: 4 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFRKCGF*LLGTSR
Trigger: TCGTGATGTACCTAAAAGTCAGAAACCACATTTTCT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACAACACACCAACAGCTTaGATGTTCTTGAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYNTPTA*MFLKLL
Trigger: TAAAAGCTTCAAGAACATTCAAGCTGTTGGTGTGTT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAATTCAGGAATCAGCCATaGGTCCAGAACCGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQFRNQP*VQNRWH
Trigger: ATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAA...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERKFCMN*RNLSTL
Trigger: AAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTT...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLKFCMN*RNLSTL
Trigger: AAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTT...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGATCTCCCTGAAATTCTaGATGAACTGCCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLISLKF*MNCRNL
Trigger: CAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAGAT...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332246.10
ENST00000454498.6
CDS-3UTR GCA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGTGCTGTGGAGATACTTaGGATAAAGGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: QSGDFDFCCKKPNREKSECCGDT*DKGAHP
Trigger: AGGATGTGCACCTTTATCGCAAGTATCTCCACAGCA...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTaGAGGCAAAGCGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVQLGYF*RQSGDF
Trigger: AAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTATGCCTGACATTCAGTaGCTGACAGAATCAGCATTT +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASIMPDIQ*LTESAF
Trigger: AAATGCTGATTCTGTCAGGCACTGAATGTCAGGCAT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTGCAGGCCTGAAATTCTaGATGAACTGCCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCAGLKF*MNCRNL
Trigger: CAAGTTCCGGCAGTTCATGCAGAATTTCAGGCCTGC...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGGCTCCCCACATTTTATaGCTACTGCTCCCTTTATGT +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLAPHIL*LLLPLC
Trigger: ACATAAAGGGAGCAGTAGGCATAAAATGTGGGGAGC...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCTGACTGAAAAGAACTaGATAAAATACCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLLTEKN*IKYLLP
Trigger: GGGAAGAAGGTATTTTATCCAGTTCTTTTCAGTCAG...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGTTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TSILPLSDTSQGATGLLLFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGTTCACAGGGTGCAACTaGGTTACTTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLFTGCN*VTFAGK
Trigger: TTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAA...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTCATTTGGCATGTCCTTaGATATGGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCHLACP*IWHQFD
Trigger: ATCAAATTGATGCCATATCCAAGGACATGCCAAATG...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGGACAGAATCAGCATTTaGCATGTCCTTGGATATGGC +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLDRISI*HVLGYG
Trigger: GCCATATCCAAGGACATGCCAAATGCTGATTCTGTC...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTCTGAGGAGAAAATGTaGTTTCTGACTTTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCSEEKM*FLTFRY
Trigger: GTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACATTAGCTCATGCATCTaGTGCTGGCTAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYISSCI*CWLIIF
Trigger: GAAAATTATTAGCCAGCACCAGATGCATGAGCTAAT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAAGTAAACAACAGTaGGATGGACTCTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISQSKQQ*DGLSHP
Trigger: AGGATGGGAGAGTCCATCTCACTGTTGTTTACTTTG...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATAGAAAATGTGGTTTCTaGCTTTTAGGTACATCACGA +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDRKCGF*LLGTSR
Trigger: TCGTGATGTACCTAAAAGTCAGAAACCACATTTTCT...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATAACACACCAACAGCTTaGATGTTCTTGAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINNTPTA*MFLKLL
Trigger: TAAAAGCTTCAAGAACATTCAAGCTGTTGGTGTGTT...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSKFCMN*RNLSTL
Trigger: AAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAAAAAGAGAAGGACGTTaGTTCCCTTCCAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQKREGR*FPSRSG
Trigger: CCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTT...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTTCTTTATGACCAGCTaGTGTTCCAAGGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCFFMTS*CSKGGT
Trigger: AGTCCCTCCCTTGGAACAGCAGCTGGTCATAAAGAA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAAGACACTTCACAGGGTaGAACTGGGTTACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISRHFTG*NWVTFA
Trigger: TGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCT...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGATCTCACAAGCATTCTaGCTTTGTCAGACACTTCAC +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLISQAF*LCQTLH
Trigger: GTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGAT...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTATGCCTGACATTCAGTaGCTGACAGAATCAGCATTT +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCMPDIQ*LTESAF
Trigger: AAATGCTGATTCTGTCAGGCACTGAATGTCAGGCAT...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGAATTCTCCATTCAGCTaGATGAAGGTAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVNSPFS*MKVKFL
Trigger: CAGGAACTTTACCTTCATCCAGCTGAATGGAGAATT...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATATTAGCTCATGCATCTaGTGCTGGCTAATAATTTTC +
Preference number: 4 (lower is better)
Translates to: HSVPDRISIWHVLGYGINISSCI*CWLIIF
Trigger: GAAAATTATTAGCCAGCACCAGATGCATGAGCTAAT...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTCATTTTTCACTTTCATaGTGGGGCCGAATGGTCGAA +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCHFSLS*WGRMVE
Trigger: TTCGACCATTCGGCCCCATCATGAAAGTGAAAAATG...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAGCGTGTTGGCCATGTTaGGCTTTTCATTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISACWPC*AFHFSL
Trigger: AAGTGAAAAATGAAAAGCTCAACATGGCCAACACGC...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTAACACACCAACAGCTTaGATGTTCTTGAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASINTPTA*MFLKLL
Trigger: TAAAAGCTTCAAGAACATTCAAGCTGTTGGTGTGTT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTCCTCCAGTGTTCAGTTaGTCCTCTTCGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCPPVFS*SSSKIL
Trigger: GAGTATTTTCGAAGAGGAGCAACTGAACACTGGAGG...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTAGCTCATGCATCTGGTaGTGGCTAATAATTTTCACA +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCSSCIW*WLIIFT
Trigger: TGTGAAAATTATTAGCCAGCACCAGATGCATGAGCT...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAAAATCCTGGCATAACTaGGGGTTCAAGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQKSWHN*GFKKGR
Trigger: CCTTCCCTTCTTGAACCCCCAGTTATGCCAGGATTT...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGAATTCTCCATTCAGCTaGATGAAGGTAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLNSPFS*MKVKFL
Trigger: CAGGAACTTTACCTTCATCCAGCTGAATGGAGAATT...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAAAATACCTTCTTCCCTaGCTGTGTATTCAGCCTACA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISKYLLP*LCIQPT
Trigger: TGTAGGCTGAATACACAGCCAGGGAAGAAGGTATTT...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCTGACTGAAAAGAACTaGATAAAATACCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVLTEKN*IKYLLP
Trigger: GGGAAGAAGGTATTTTATCCAGTTCTTTTCAGTCAG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTTTTTGTCGTCCTTTATaGAAGTCTTTTCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASIFCRPL*KSFLCC
Trigger: GCAACAGAGAAAAGACTTCCATAAAGGACGACAAAA...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTGCATGTCCTTGGATATaGCATCAATTTGATGCTTTG +
Preference number: 4 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCACPWI*HQFDAL
Trigger: CAAAGCATCAAATTGATGCCATATCCAAGGACATGC...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCATTTGGCATGTCCTTaGATATGGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVHLACP*IWHQFD
Trigger: ATCAAATTGATGCCATATCCAAGGACATGCCAAATG...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTCATTTGGCATGTCCTTaGATATGGCATCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: IQCLTESAFGMSLDMASIHLACP*IWHQFD
Trigger: ATCAAATTGATGCCATATCCAAGGACATGCCAAATG...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATCTAGATTCTGGCAGATaGATTGATCTTTCACAATAT +
Preference number: 4 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDLDSGR*IDLSQY
Trigger: ATATTGTGAAAGATCAATCCATCTGCCAGAATCTAG...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGGTGAAATCACTTAGCTaGTTATCCTCAGCCAATATG +
Preference number: 4 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLVKSLS*LSSANM
Trigger: CATATTGGCTGAGGATAACCAGCTAAGTGATTTCAC...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
3UTR CAA 72 bp TGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: CNWVTFAGKAEI*ISVVKSPTERN
Trigger: ATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
3UTR CAA 72 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTaGGTTCACACGGTATACTTTGGTTTATTTAAACAG +
Preference number: 4 (lower is better)
Translates to: SQEEHPVLKRDC*VHTVYFGLFKQ
Trigger: CTGTTTAAATAAACCAAAGTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGATATCACCAGTCTGAATaGGTTTCCTTTTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: FAGKAEILISVVKSPTERYHQSE*VSFSVK
Trigger: CTTTACAGAAAAGGAAACTCATTCAGACTGGTGATA...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAACGATATCACCAGTCTaGATGAGTTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSTISPV*MSFLFC
Trigger: ACAGAAAAGGAAACTCATTCAGACTGGTGATATCGT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR GCA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAGAGATAATTAGCTCATaGATCTGGTGCTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISEIISS*IWCWLI
Trigger: TATTAGCCAGCACCAGATGCATGAGCTAATTATCTC...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGCTGACTGAAAAGAACTaGATAAAATACCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRLTEKN*IKYLLP
Trigger: GGGAAGAAGGTATTTTATCCAGTTCTTTTCAGTCAG...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGTCTGAGGAGAAAATGTaGTTTCTGACTTTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRSEEKM*FLTFRY
Trigger: GTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGA...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAAGGCAGAAGCAATGACTaGAGTGAAATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQGRSND*SEISKF
Trigger: AAACTTGGAGATTTCACTTCAGTCATTGCTTCTGCC...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTTATATTGATGAAGTCTaGCCGATACTGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCYIDEV*PILTRH
Trigger: ATGACGTGTCAGTATCGGTCAGACTTCATCAATATA...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAAGAAAATGTGGTTTCTaGCTTTTAGGTACATCACGA +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSRKCGF*LLGTSR
Trigger: TCGTGATGTACCTAAAAGTCAGAAACCACATTTTCT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCATCTGAGGAGAAAATGTaGTTTCTGACTTTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSSEEKM*FLTFRY
Trigger: GTACCTAAAAGTCAGAAACCACATTTTCTCCTCAGA...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CCA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGCTAGATTCTGGCAGATaGATTGATCTTTCACAATAT +
Preference number: 4 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLLDSGR*IDLSQY
Trigger: ATATTGTGAAAGATCAATCCATCTGCCAGAATCTAG...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR TCA 90 bp TCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTATTAGTACAATATATTGATGAAGTCTaGCCGATACTGACACGTCAT +
Preference number: 4 (lower is better)
Translates to: SSSKILFRESICTSVLVQYIDEV*PILTRH
Trigger: ATGACGTGTCAGTATCGGTCAGACTTCATCAATATA...TTGTACTAATACAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS TCA 90 bp CCGCCTTCCCGAAGCACCGCAGGGTTCGCCGCACAACGCCGCTGGTaGGGACCGAGCGCATCTGCCCACAGCGCCCCAGCCGCGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPSRSTAGFAAQRRW*GPSASAHSAPAAPG
Trigger: TCCAGGCGCGGCTGGGGCGCTGTGGGCAGATGCGCTCGGTCCTCACCAGCGGCGTTGTGCGGCGAACCCTGCGGTGCTTCGGGAAGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS CCA 90 bp GCTCCTCCCACTCCTGAAGGACGGCCTGGTACCCCTCCTTCCCCGTaGGGCTGTTGGCCCTGGGCAGTGCCAGCTGCTCCTCGTCACCTT +
Preference number: 5 (lower is better)
Translates to: APPTPEGRPGTPPSP*GCWPWAVPAAPRHL
Trigger: AAGGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAACAGCCCCACGGGGAAGGAGGGGTACCAGGCCGTCCTTCAGGAGTGGGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000519222.5
ENST00000522854.5
ENST00000523262.5
CDS GCA 90 bp GGGCTCCTGTCCAGACCCAGGCCAGCAGCATCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCACTCCTCTCCTGCAGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLLSRPRPAASLAWY*PFLSCSLLSCSSSL
Trigger: CAAGGAGGAGCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCCTGGGTCTGGACAGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 90 bp GGGGCTGTTGGCCCTGGGCAGTGCCAGCTGCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTACAGGACAGAGATAGCACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GAVGPGQCQLLLVTF*GAGQHVQDRDSTAE
Trigger: CTCTGCTGTGCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAGGGCCAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523262.5
CDS GCA 90 bp CCAGCTGCCAGCGAGCCGCTTCCTAACTCGCAGCTCTGCTTCCAATaGTCTGACAGCGCTGAAGTCACACTGGGGTTTCCAGGTTGGGGT +
Preference number: 5 (lower is better)
Translates to: PAASEPLPNSQLCFQ*SDSAEVTLGFPGWG
Trigger: ACCCCAACCTGGAAACCCCAGTGTGACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGGAAGCGGCTCGCTGGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS GCA 90 bp GAAACGTGCCCAGCTGCCAGCGAGCCGCTTCCTAACTCGCAGCTCTaGTTCCAATGCTCTGACAGCGCTGAAGTCACACTGGGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ETCPAASEPLPNSQL*FQCSDSAEVTLGFP
Trigger: TGGAAACCCCAGTGTGACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGGAAGCGGCTCGCTGGCAGCTGGGCACGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS-3UTR CAA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGACAGGAAGCATGCGTTaGGGGCCCCCGGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRTGSMR*GPPELL
Trigger: AAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGT...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTTTCCCCGTGGGGCTGTaGGCCCTGGGCAGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPFPVGL*ALGSAS
Trigger: GCTGGCACTGCCCAGGGCCAACAGCCCCACGGGGAA...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAGCCCCTGCCTGGAGATaGCGCCTTGCAGGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEAPAWR*RLAGSD
Trigger: GTCACTCCCTGCAAGGCGCAATCTCCAGGCAGGGGC...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS GCA 90 bp CCCTGGGCTAGACCACAGGAAGCATGCGTTTGGGGCCCCCGGAGCTaGTTGCATCCATTTCCTTCTAGAACGAGTTCTGCCTCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PWARPQEACVWGPRS*LHPFPSRTSSASWS
Trigger: ACTCCAAGAGGCAGAACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCTAGCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000517651.5
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523262.5
ENST00000524213.5
CDS CCA 90 bp GCAAAACGCCGTCTCTCCTCACAAAGCCACAGCAGCAGCAAGAGCTaGATTGGTCTCACTACTAGTGGAAGGTCAGGACCGGACCGGCAG +
Preference number: 5 (lower is better)
Translates to: AKRRLSSQSHSSSKS*IGLTTSGRSGPDRQ
Trigger: CTGCCGGTCCGGTCCTGACCTTCCACTAGTAGTGAGACCAATCCAGCTCTTGCTGCTGCTGTGGCTTTGTGAGGAGAGACGGCGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523919.5
CDS CCA 90 bp GATGCAGGTACTGCCCAGTCCAAAGCTCAATGTCTTTCCAGCAGATaGGGCCTCTGGGTTTCTCCTGCCTGCCCCTTCCCTTTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: DAGTAQSKAQCLSSR*GLWVSPACPFPFPW
Trigger: CCAGGGAAAAGGGAAGGGGCAGGCAGGAGAAACCCAGAGGCCCCATCTGCTGGAAAGACATTGAGCTTTGGACTGGGCAGTACCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522732.1
CDS-3UTR CAA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGGGCCCCCGGAGCTGCTaGCATCCATTTCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRGPRSC*HPFPSR
Trigger: TCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCC...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp TCCACATCACAGAAAAAGAGAAGGACGTTGCTTCCCTTCCAGAAGCGGGCTCCAACAGGAAGCATGCGTTaGGGGCCCCCGGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: STSQKKRRTLLPFQKRAPTGSMR*GPPELL
Trigger: AAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGT...TGGAGCCCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTTCTGTGATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCCCCGTGGGGCTGTaGGCCCTGGGCAGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDFPVGL*ALGSAS
Trigger: GCTGGCACTGCCCAGGGCCAACAGCCCCACGGGGAA...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGTTCCCCGTGGGGCTGTaGGCCCTGGGCAGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TSILPLSDTSQGATGLLLFPVGL*ALGSAS
Trigger: GCTGGCACTGCCCAGGGCCAACAGCCCCACGGGGAA...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS TCA 90 bp GGGGACCTTTCCTTTCTTCTGGTCCACCCTCAGGCAAGTCACTTCTaGGCACTGCTAAGAGAACGCAGCCCCACAAAGGTTCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GDLSFLLVHPQASHF*ALLRERSPTKVLSS
Trigger: GGAGGAGAGAACCTTTGTGGGGCTGCGTTCTCTTAGCAGTGCTCAGAAGTGACTTGCCTGAGGGTGGACCAGAAGAAAGGAAAGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332246.10
ENST00000522573.5
CDS TCA 90 bp GTGATTGGGGCTGTTCTCTGCAGGACTGTTCAGGGTCTCCAAGGCTaGTTCAATGGCTTCCACCAACTCATCCCGCTTGTCCTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: VIGAVLCRTVQGLQG*FNGFHQLIPLVLPH
Trigger: GTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACAGTCCTGCAGAGAACAGCCCCAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 90 bp GGCTGTTCTCTGCAGGACTGTTCAGGGTCTCCAAGGCTGATTCAATaGCTTCCACCAACTCATCCCGCTTGTCCTTCCTCACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GCSLQDCSGSPRLIQ*LPPTHPACPSSQAS
Trigger: AGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTTGGAGACCCTGAACAGTCCTGCAGAGAACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS-3UTR CAA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTTTCCCCGTGGGGCTGTaGGCCCTGGGCAGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: IQCLTESAFGMSLDMASIFPVGL*ALGSAS
Trigger: GCTGGCACTGCCCAGGGCCAACAGCCCCACGGGGAA...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGCATTCACCTCTGCCTaGTCCACCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTAFTSA*STCECR
Trigger: CCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGC...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS CCA 90 bp GGATTGGTCTCACTACTAGTGGAAGGTCAGGACCGGACCGGCAGATaGTCAGCTCCCCACATTTTATGCCTACTGCTCCCTTTATGTCTG +
Preference number: 5 (lower is better)
Translates to: GLVSLLVEGQDRTGR*SAPHILCLLLPLCL
Trigger: CAGACATAAAGGGAGCAGTAGGCATAAAATGTGGGGAGCTGACCATCTGCCGGTCCGGTCCTGACCTTCCACTAGTAGTGAGACCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000523919.5
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGGCCCCCGGAGCTGCTaGCATCCATTTCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQGPRSC*HPFPSR
Trigger: TCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTAGCAGCATCGCTGGCTaGGTACTGCCCATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPSSIAG*VLPIPE
Trigger: CTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp AGGTGGAAGAGTCCTCGCACAGGCGTCCGTACCACTATGAGGTTGCTGTGGAGAAGAGGCACGATAACATaGATAAGCGTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RWKSPRTGVRTTMRLLWRRGTIT*ISVLAM
Trigger: CATGGCCAACACGCTTATCAATGTTATCGTGCCTCT...TCTCCACAGCAACCTCATAGTGGTACGGACGCCTGTGCGAGGACTCTTCCACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGACTGGGGTTTCCAGGTaGGGGTCAGGAGGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQTGVSR*GSGGKV
Trigger: CACTTTCCCTCCTGACCCCAACCTGGAAACCCCAGT...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS GCA 90 bp AATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTGATGTaGAGCCAACAGCAAGAGGGGACCTCCTCACAAAGCCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: NLQVFTFIPITAFLM*SQQQEGTSSQSHSS
Trigger: GCTGCTGTGGCTTTGTGAGGAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CAA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAAACGAGTTCTGCCTCTaGGAGTTAACCACCACACAG +
Preference number: 5 (lower is better)
Translates to: RWTLPSCSMHISLNLGGENEFCL*ELTTTQ
Trigger: CTGTGTGGTGGTTAACTCCAAGAGGCAGAACTCGTT...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTAGCAGCATCGCTGGCTaGGTACTGCCCATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFSSIAG*VLPIPE
Trigger: CTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCT...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTAGCAGCATCGCTGGCTaGGTACTGCCCATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SHKHSAFVRHFTGCNWVTSSIAG*VLPIPE
Trigger: CTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCT...AGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCATTCACCTCTGCCTaGTCCACCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFAFTSA*STCECR
Trigger: CCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTGCATTCACCTCTGCCTaGTCCACCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCAFTSA*STCECR
Trigger: CCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGC...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGAGAGGCACGATAACATaGATAAGCGTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: SEMDSPILLNAHLPEPGRRGTIT*ISVLAM
Trigger: CATGGCCAACACGCTTATCAATGTTATCGTGCCTCT...CCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTCCTGGAGATTGCGCCTaGCAGGGAGTGACAACGGGC +
Preference number: 5 (lower is better)
Translates to: NHLAGYPQPICASEPSQLPGDCA*QGVTTG
Trigger: GCCCGTTGTCACTCCCTGCAAGGCGCAATCTCCAGG...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS TCA 90 bp AGTGAAATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACAGCGAAGGTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: SEISKFSPSFPSQPS*CAANSKRGQRRSGT
Trigger: GGTTCCTGACCTTCGCTGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517494.1
CDS-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATAGCCGAAGGAGCCGCTaGCTGGTTGAGTTGACACTC +
Preference number: 5 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDSRRSR*LVELTL
Trigger: GAGTGTCAACTCAACCAGCAAGCGGCTCCTTCGGCT...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CAA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGGGCCCCCGGAGCTGCTaGCATCCATTTCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: TSILPLSDTSQGATGLLLGPRSC*HPFPSR
Trigger: TCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCC...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTGCATTCACCTCTGCCTaGTCCACCTGCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NHLAGYPQPICASEPSQLAFTSA*STCECR
Trigger: CCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGC...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAACGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RWTLPSCSMHISLNLGGERLNSC*WSPLKV
Trigger: CACCTTCAAAGGGGACCACAAACACGAATTCAAACG...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS TCA 90 bp AGTGAAATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACCTCCTCACAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: SEISKFSPSFPSQPS*CAANSKRGPPHKAT
Trigger: TGTGGCTTTGTGAGGAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS GCA 90 bp AATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTGATGTaGAGCCAACAGCAAGAGGGGACCTTTCCTTTCTTCTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: NLQVFTFIPITAFLM*SQQQEGTFPFFWST
Trigger: GGTGGACCAGAAGAAAGGAAAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CAA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGAGGTGGCTACATCATaGCTCCTCTGGGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLEVATS*LLWVKI
Trigger: AATTTTGACCCAGAGGAGCAATGATGTAGCCACCTC...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGACAGGAAGCATGCGTTaGGGGCCCCCGGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLTGSMR*GPPELL
Trigger: AAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGT...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TGCTGTTCCAAGGGAGGGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGCGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CCSKGGTASWWPYIMPGLRLNSC*WSPLKV
Trigger: CACCTTCAAAGGGGACCACAAACACGAATTCAAACG...CAATCCTGGCATAATATACGGCCACCATGATGCAGTCCCTCCCTTGGAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTCTCCGCCCCAGCCTTaGATGTCCAGATCAAACCCA +
Preference number: 5 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCSPPQP*MSRSNP
Trigger: TGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAGA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTACTGGGGTTTCCAGGTaGGGGTCAGGAGGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: NHLAGYPQPICASEPSQLTGVSR*GSGGKV
Trigger: CACTTTCCCTCCTGACCCCAACCTGGAAACCCCAGT...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGGTCTTTCCCGGTCTTaGCTGTCAGTACTCTACTCC +
Preference number: 5 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDGLSRS*LSVLYS
Trigger: GGAGTAGAGTACTGACAGCAAAGACCGGGAAAGACC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGGAGGTGGCTACATCATaGCTCCTCTGGGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQEVATS*LLWVKI
Trigger: AATTTTGACCCAGAGGAGCAATGATGTAGCCACCTC...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAACAGGAAGCATGCGTTaGGGGCCCCCGGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSTGSMR*GPPELL
Trigger: AAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAAT +
Preference number: 5 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLCLWSP*KVSSYN
Trigger: ATTGTATGAGCTCACCTTCAAAGGGGACCACAAACA...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGCGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQRLNSC*WSPLKV
Trigger: CACCTTCAAAGGGGACCACAAACACGAATTCAAACG...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAACATTGATAAGCGTGTaGGCCATGTTGAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: RWTLPSCSMHISLNLGGETLISV*AMLSFS
Trigger: TGAAAAGCTCAACATGGCCAACACGCTTATCAATGT...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp GCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGAGAGGCACGATAACATaGATAAGCGTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ARSQEEHPVLKRDCLVHTRGTIT*ISVLAM
Trigger: CATGGCCAACACGCTTATCAATGTTATCGTGCCTCT...CGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGA +
Preference number: 5 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPMNCRN*STLFAR
Trigger: TCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCAT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp GGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGATGGATGCCTCGTTCATGGCCTaGGACTGCATGCACATCTTG +
Preference number: 5 (lower is better)
Translates to: GWITCSKNFHPTRFWQMDASFMA*DCMHIL
Trigger: CAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGC...ATCCATCTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS TCA 90 bp AGTGAAATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACCTTTCCTTTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: SEISKFSPSFPSQPS*CAANSKRGPFLSSG
Trigger: ACCAGAAGAAAGGAAAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS TCA 90 bp CTGGTGAAATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTaGGCCATCACAGCTTCTAAGATCCAACACCGCACAATCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LVKSLSWLSSANMCI*AITASKIQHRTIKG
Trigger: GCCCTTGATTGTGCGGTGTTGGATCTTAGAAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATTTCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397998.7
ENST00000518542.1
ENST00000519222.5
CDS TCA 90 bp GTAGATCCTCCGAAGAACAACAAGCCCAAATGTCTCCACGGATGTTaGCTTCTGATAAGCAATCTCAATGGAAACAGGTGGAGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: VDPPKNNKPKCLHGC*LLISNLNGNRWRGR
Trigger: CCTCCCTCTCCACCTGTTTCCATTGAGATTGCTTATCAGAAGTCAACATCCGTGGAGACATTTGGGCTTGTTGTTCTTCGGAGGATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518542.1
CDS-3UTR CAA 90 bp TCTCCATTCAGCTGGATGAAGGTAAAGTTCCTGAAGTTGGCAGCTTTGGAAGTGAAAAAGAGAAGGACGTaGCTTCCCTTCCAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SPFSWMKVKFLKLAALEVKKRRT*LPFQKR
Trigger: CCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTT...CACTTCCAAAGCTGCCAACTTCAGGAACTTTACCTTCATCCAGCTGAATGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp AGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGGAGGTGAAAAAGCAGGATGGTATTaGTTCTCTCCCTGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: RWTLPSCSMHISLNLGGEKAGWY*FSPCFN
Trigger: ATTGAAACAGGGAGAGAACAAATACCATCCTGCTTT...TTCACCTCCCAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS-3UTR CAA 90 bp ACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: TTVRWTLPSCSMHISLNLWVKIT*ASFLEI
Trigger: TATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCA...CAGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGAGGTGGCTACATCATaGCTCCTCTGGGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFEVATS*LLWVKI
Trigger: AATTTTGACCCAGAGGAGCAATGATGTAGCCACCTC...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTAATAAGATGAGCCGTTaGAATTCGTGTTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPNKMSR*NSCLWS
Trigger: GGACCACAAACACGAATTCAAACGGCTCATCTTATT...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGAGCGTGTTGGCCATGTaGAGCTTTTCATTTTTCACT +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQSVLAM*SFSFFT
Trigger: AGTGAAAAATGAAAAGCTCAACATGGCCAACACGCT...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGA +
Preference number: 5 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFMNCRN*STLFAR
Trigger: TCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCAT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TGCTGTTCCAAGGGAGGGACTGCATCATGGTGGCCGTATATTATGCCAGGATTGCTGAAGTTGGCAGCTTaGGAAGTGTTTTCAAGTATT +
Preference number: 5 (lower is better)
Translates to: CCSKGGTASWWPYIMPGLLKLAA*EVFSSI
Trigger: AATACTTGAAAACACTTCCAAAGCTGCCAACTTCAG...CAATCCTGGCATAATATACGGCCACCATGATGCAGTCCCTCCCTTGGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp GGCCTGGGGTGGATAACATGTAGCAAAAACTTCCATCCCACTAGATTCTGGCAGTTCAGCCTACACGTATaGAGGAATTCAGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: GLGWITCSKNFHPTRFWQFSLHV*RNSDVK
Trigger: CTTCACATCTGAATTCCTCAATACGTGTAGGCTGAA...CTGCCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGTCTCCGCCCCAGCCTTaGATGTCCAGATCAAACCCA +
Preference number: 5 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLSPPQP*MSRSNP
Trigger: TGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAGA...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TGTTCAGTTGCTCCTCTTCGAAAATACTCTTCAGAGAAAGTATCTGTACGTCTGGCCTCGTTCATGGCCTaGGACTGCATGCACATCTTG +
Preference number: 5 (lower is better)
Translates to: CSVAPLRKYSSEKVSVRLASFMA*DCMHIL
Trigger: CAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGC...CAGACGTACAGATACTTTCTCTGAAGAGTATTTTCGAAGAGGAGCAACTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGGCCTCGTTCATGGCCTaGGACTGCATGCACATCTTG +
Preference number: 5 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLASFMA*DCMHIL
Trigger: CAAGATGTGCATGCAGTCCAAGGCCATGAACGAGGC...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACACAAGCATTCTGCCTTaGTCAGACACTTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYTSILP*SDTSQG
Trigger: ACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTACAAGCATTCTGCCTTaGTCAGACACTTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFTSILP*SDTSQG
Trigger: ACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATGAGGTGGCTACATCATaGCTCCTCTGGGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: HSVPDRISIWHVLGYGINEVATS*LLWVKI
Trigger: AATTTTGACCCAGAGGAGCAATGATGTAGCCACCTC...ATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTAACGAGTTCTGCCTCTaGGAGTTAACCACCACACAG +
Preference number: 5 (lower is better)
Translates to: IQCLTESAFGMSLDMASINEFCL*ELTTTQ
Trigger: CTGTGTGGTGGTTAACTCCAAGAGGCAGAACTCGTT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTGGCCCCCGGAGCTGCTaGCATCCATTTCCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCGPRSC*HPFPSR
Trigger: TCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCC...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAAT +
Preference number: 5 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVCLWSP*KVSSYN
Trigger: ATTGTATGAGCTCACCTTCAAAGGGGACCACAAACA...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTCACACGGTATACTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAAT +
Preference number: 5 (lower is better)
Translates to: SQEEHPVLKRDCLVHTVYCLWSP*KVSSYN
Trigger: ATTGTATGAGCTCACCTTCAAAGGGGACCACAAACA...GTATACCGTGTGAACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTTCAGCCTACACGTATaGAGGAATTCAGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFFSLHV*RNSDVK
Trigger: CTTCACATCTGAATTCCTCAATACGTGTAGGCTGAA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTCAAACCCACCTATATaGATGAAGTCTGACCGATAC +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFSNPPI*MKSDRY
Trigger: GTATCGGTCAGACTTCATCAATATAGGTGGGTTTGA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCATCTCCGCCCCAGCCTTaGATGTCCAGATCAAACCCA +
Preference number: 5 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSSPPQP*MSRSNP
Trigger: TGGGTTTGATCTGGACATCAAAGGCTGGGGCGGAGA...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AACAACAGTGAGATGGACTCTCCCATCCTGCTCAATGCACATCTCCCTGAACCTGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: NNSEMDSPILLNAHLPEPGKAEI*ISVVKS
Trigger: GCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCC...AGGTTCAGGGAGATGTGCATTGAGCAGGATGGGAGAGTCCATCTCACTGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS-3UTR CAA 90 bp ACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGTCCTCCAGTGTTCAGTaGCTCCTCTTCGAAAATACT +
Preference number: 5 (lower is better)
Translates to: TSILPLSDTSQGATGLLLSSSVQ*LLFENT
Trigger: AGTATTTTCGAAGAGGAGCAACTGAACACTGGAGGA...CAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFWVKIT*ASFLEI
Trigger: TATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCA...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTCGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IQCLTESAFGMSLDMASIRLNSC*WSPLKV
Trigger: CACCTTCAAAGGGGACCACAAACACGAATTCAAACG...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTAATAAGATGAGCCGTTaGAATTCGTGTTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCNKMSR*NSCLWS
Trigger: GGACCACAAACACGAATTCAAACGGCTCATCTTATT...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATGGAAGCCAGAAGCCAGGAGGAGCACCCTGTTTTGAAAAGAGATTGTTTGGTTAATAAGATGAGCCGTTaGAATTCGTGTTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: MEARSQEEHPVLKRDCLVNKMSR*NSCLWS
Trigger: GGACCACAAACACGAATTCAAACGGCTCATCTTATT...AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTCCTGGCTTCTGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGCAACTGGGTTACTTTTACATTGATAAGCGTGTaGGCCATGTTGAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: HKHSAFVRHFTGCNWVTFTLISV*AMLSFS
Trigger: TGAAAAGCTCAACATGGCCAACACGCTTATCAATGT...AAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGA +
Preference number: 5 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVMNCRN*STLFAR
Trigger: TCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCAT...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTCTGAAGTTGGCAGCTTaGGAAGTGTTTTCAAGTATT +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFLKLAA*EVFSSI
Trigger: AATACTTGAAAACACTTCCAAAGCTGCCAACTTCAG...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTTCAGCCTACACGTATaGAGGAATTCAGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: HRVQLGYFCRQSGDFDFCFSLHV*RNSDVK
Trigger: CTTCACATCTGAATTCCTCAATACGTGTAGGCTGAA...ACAGAAATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTGAAGTCTTTTCTCTGTaGCAGCCACTTTCAGTAATT +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFEVFSL*QPLSVI
Trigger: AATTACTGAAAGTGGCTGCAACAGAGAAAAGACTTC...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTCAGTGCCTGACAGAATCAGCATTTGGCATGTCCTTGGATATGGCATCAATTACAAGCATTCTGCCTTaGTCAGACACTTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: IQCLTESAFGMSLDMASITSILP*SDTSQG
Trigger: ACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGT...AATTGATGCCATATCCAAGGACATGCCAAATGCTGATTCTGTCAGGCACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTAAAGCAGGATGGTATTaGTTCTCTCCCTGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: SDTSQGATGLLLQAKRRFKAGWY*FSPCFN
Trigger: ATTGAAACAGGGAGAGAACAAATACCATCCTGCTTT...AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CAA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGGCAGCAAGAGCTGGATaGGTCTCACTACTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRAARAG*VSLLVE
Trigger: TTCCACTAGTAGTGAGACCAATCCAGCTCTTGCTGC...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDWVKIT*ASFLEI
Trigger: TATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCA...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp AATCACTTAGCTGGTTATCCTCAGCCAATATGTGCATCTGAGCCATCACAGCTTAGCGTGTTGGCCATGTaGAGCTTTTCATTTTTCACT +
Preference number: 5 (lower is better)
Translates to: NHLAGYPQPICASEPSQLSVLAM*SFSFFT
Trigger: AGTGAAAAATGAAAAGCTCAACATGGCCAACACGCT...AAGCTGTGATGGCTCAGATGCACATATTGGCTGAGGATAACCAGCTAAGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397998.7
ENST00000519222.5
CDS-3UTR CAA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGAGAGGCACGATAACATaGATAAGCGTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: QSGDFDFCCKKPNREKSERGTIT*ISVLAM
Trigger: CATGGCCAACACGCTTATCAATGTTATCGTGCCTCT...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAAAAAAGAGAAGGACGTaGCTTCCCTTCCAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSKKRRT*LPFQKR
Trigger: CCGCTTCTGGAAGGGAAGCAACGTCCTTCTCTTTTT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ACACTTCACAGGGTGCAACTGGGTTACTTTTGCAGGCAAAGCGGAGATTTTGATGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: TLHRVQLGYFCRQSGDFDGKAEI*ISVVKS
Trigger: GCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCC...ATCAAAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGCACCCTGTGAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCAACTGGGTTACTTTaGCAGGCAAAGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEATGLL*QAKRRF
Trigger: AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGGCAACTGGGTTACTTTaGCAGGCAAAGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRATGLL*QAKRRF
Trigger: AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGC...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTGCAACTGGGTTACTTTaGCAGGCAAAGCGGAGATTT +
Preference number: 5 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCATGLL*QAKRRF
Trigger: AAATCTCCGCTTTGCCTGCAAAAGTAACCCAGTTGC...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGTCCTCCAGTGTTCAGTaGCTCCTCTTCGAAAATACT +
Preference number: 5 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVSSSVQ*LLFENT
Trigger: AGTATTTTCGAAGAGGAGCAACTGAACACTGGAGGA...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS TCA 90 bp GCTTCTCTACTTTTAAAGGATGATCTTGCAGGCAGAAGCAATGACTaGAGTGAAATCTCCAAGTTTTCACCTTCATTCCCATCACAGCCT +
Preference number: 5 (lower is better)
Translates to: ASLLLKDDLAGRSND*SEISKFSPSFPSQP
Trigger: AGGCTGTGATGGGAATGAAGGTGAAAACTTGGAGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAGTAGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000517651.5
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523227.5
ENST00000523262.5
ENST00000524213.5
CDS-3UTR CAA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTAACGAGTTCTGCCTCTaGGAGTTAACCACCACACAG +
Preference number: 5 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCNEFCL*ELTTTQ
Trigger: CTGTGTGGTGGTTAACTCCAAGAGGCAGAACTCGTT...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAAT +
Preference number: 5 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLCLWSP*KVSSYN
Trigger: ATTGTATGAGCTCACCTTCAAAGGGGACCACAAACA...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGTCCTCCAGTGTTCAGTaGCTCCTCTTCGAAAATACT +
Preference number: 5 (lower is better)
Translates to: QSGDFDFCCKKPNREKSESSSVQ*LLFENT
Trigger: AGTATTTTCGAAGAGGAGCAACTGAACACTGGAGGA...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TATCTGTACGTCTGTATTAGTACAAACCATTCCTTCCCTATGTCTCAATGCCTGAATAAGATGAGCCGTTaGAATTCGTGTTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: YLYVCISTNHSFPMSQCLNKMSR*NSCLWS
Trigger: GGACCACAAACACGAATTCAAACGGCTCATCTTATT...CAGGCATTGAGACATAGGGAAGGAATGGTTTGTACTAATACAGACGTACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TTTGCAGGCAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAACATTGATAAGCGTGTaGGCCATGTTGAGCTTTTCA +
Preference number: 5 (lower is better)
Translates to: FAGKAEILISVVKSPTERTLISV*AMLSFS
Trigger: TGAAAAGCTCAACATGGCCAACACGCTTATCAATGT...TCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCCTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGTCAAACCCACCTATATaGATGAAGTCTGACCGATAC +
Preference number: 5 (lower is better)
Translates to: QSGDFDFCCKKPNREKSESNPPI*MKSDRY
Trigger: GTATCGGTCAGACTTCATCAATATAGGTGGGTTTGA...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCAGACACTTCACAGGGTGGAAGTCTTTTCTCTGTaGCAGCCACTTTCAGTAATT +
Preference number: 5 (lower is better)
Translates to: IRLIISQAFCLCQTLHRVEVFSL*QPLSVI
Trigger: AATTACTGAAAGTGGCTGCAACAGAGAAAAGACTTC...CACCCTGTGAAGTGTCTGACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp ACGGTATACTTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATA +
Preference number: 5 (lower is better)
Translates to: TVYFGLFKQVRKRSLLLRWVKIT*ASFLEI
Trigger: TATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCA...CCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAAGTATACCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp GATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGCTTTCTCAAGCGTGTTGGCCATGTaGAGCTTTTCATTTTTCACT +
Preference number: 5 (lower is better)
Translates to: DFDFCCKKPNREKSEAFSSVLAM*SFSFFT
Trigger: AGTGAAAAATGAAAAGCTCAACATGGCCAACACGCT...TGAGAAAGCCTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CATCAAAACCTCCACACCATTAGGCTTATAATCTCACAAGCATTCTGCCTTTGTCTGAAGTTGGCAGCTTaGGAAGTGTTTTCAAGTATT +
Preference number: 5 (lower is better)
Translates to: HQNLHTIRLIISQAFCLCLKLAA*EVFSSI
Trigger: AATACTTGAAAACACTTCCAAAGCTGCCAACTTCAG...ACAAAGGCAGAATGCTTGTGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCATCAAACCCACCTATATaGATGAAGTCTGACCGATAC +
Preference number: 5 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISSNPPI*MKSDRY
Trigger: GTATCGGTCAGACTTCATCAATATAGGTGGGTTTGA...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp CAAAGCGGAGATTTTGATTTCTGTTGTAAAAAGCCCAACAGAGAGAAATCGGAGGGCAAAGCGGAGATTTaGATTTCTGTTGTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: QSGDFDFCCKKPNREKSEGKAEI*ISVVKS
Trigger: GCTTTTTACAACAGAAATCAAAATCTCCGCTTTGCC...CTCCGATTTCTCTCTGTTGGGCTTTTTACAACAGAAATCAAAATCTCCGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAGAGGAGCACCCTGTTTaGAAAAGAGATTGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISEEHPV*KRDCLV
Trigger: AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTC...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTAGCGTGTTGGCCATGTaGAGCTTTTCATTTTTCACT +
Preference number: 5 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCSVLAM*SFSFFT
Trigger: AGTGAAAAATGAAAAGCTCAACATGGCCAACACGCT...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TCAGTGTGTTGTAAACACCATCAAAACCTCCACACCATTAGGCTTATAATCTCAATCAGTCCAATTCTTTaGTCGTCCTTTATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SVCCKHHQNLHTIRLIISISPIL*SSFMEV
Trigger: GACTTCCATAAAGGACGACAAAAGAATTGGACTGAT...TGAGATTATAAGCCTAATGGTGTGGAGGTTTTGATGGTGTTTACAACACACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS-3UTR CAA 90 bp TTTGGTTTATTTAAACAGGTAAGAAAGCGGTCCCTACTTCTGAGGAGAAAATGTGAGGAGCACCCTGTTTaGAAAAGAGATTGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FGLFKQVRKRSLLLRRKCEEHPV*KRDCLV
Trigger: AACCAAACAATCTCTTTTCAAAACAGGGTGCTCCTC...ACATTTTCTCCTCAGAAGTAGGGACCGCTTTCTTACCTGTTTAAATAAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
CDS GCA 72 bp CGCCGCACAACGCCGCTGGTGAGGACCGAGCGCATCTaGCCACAGCGCCCCAGCCGCGCCTGGAGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: RRTTPLVRTERI*PQRPSRAWSLP
Trigger: CGGGAGGCTCCAGGCGCGGCTGGGGCGCTGTGGGCAGATGCGCTCGGTCCTCACCAGCGGCGTTGTGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS TCA 72 bp CGAAGCACCGCAGGGTTCGCCGCACAACGCCGCTGGTaGGGACCGAGCGCATCTGCCCACAGCGCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: RSTAGFAAQRRW*GPSASAHSAPA
Trigger: GGCTGGGGCGCTGTGGGCAGATGCGCTCGGTCCTCACCAGCGGCGTTGTGCGGCGAACCCTGCGGTGCTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519222.5
CDS TCA 72 bp GCACCACTGTGGGTAAGCGATGTCTGCAGGGACCCCTaGCGGCCACTGGGAGGCCAGGAGAGAAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: APLWVSDVCRDP*RPLGGQERRGR
Trigger: TCTCCCTCTTCTCTCCTGGCCTCCCAGTGGCCGTCAGGGGTCCCTGCAGACATCGCTTACCCACAGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517494.1
CDS GCA 72 bp GCTGTGCGATCTGCCGCTTCAGGCTGCTCACGTAGTTaGGGTGCTGCTCCTCCCACTCCTGAAGGACGGCCT +
Preference number: 6 (lower is better)
Translates to: AVRSAASGCSRS*GAAPPTPEGRP
Trigger: AGGCCGTCCTTCAGGAGTGGGAGGAGCAGCACCGCAACTACGTGAGCAGCCTGAAGCGGCAGATCGCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000519222.5
ENST00000522854.5
ENST00000523262.5
CDS GCA 72 bp GCCCCCGGCGAACCATCATCATTCAGGAATCAGCCATaGGTCCAGAACCGGTGGCATCCCTCAAAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: APGEPSSFRNQP*VQNRWHPSKPG
Trigger: CCCCGGCTTTGAGGGATGCCACCGGTTCTGGACGCATGGCTGATTCCTGAATGATGATGGTTCGCCGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523262.5
ENST00000524213.5
CDS GCA 72 bp TCCAGACCCAGGCCAGCAGCATCGCTGGCTTGGTACTaGCCATTCCTGAGCTGCTCACTCCTCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPRPAASLAWY*PFLSCSLLSCS
Trigger: GCTGCAGGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCCTGGGTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 72 bp CTCCTGTCCAGACCCAGGCCAGCAGCATCGCTGGCTTaGTACTGCCCATTCCTGAGCTGCTCACTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LLSRPRPAASLA*YCPFLSCSLLS
Trigger: GGAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCCTGGGTCTGGACAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 72 bp CCCAGAGAAGGTAAGAGCGCACACGCTGGAAAACGGTaGGAGCAGGGAGGAACGACCGCCTTCCCGAAGCAC +
Preference number: 6 (lower is better)
Translates to: PREGKSAHAGKR*EQGGTTAFPKH
Trigger: GTGCTTCGGGAAGGCGGTCGTTCCTCCCTGCTCCCACCGTTTTCCAGCGTGTGCGCTCTTACCTTCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS CAA 72 bp GCTCCTGTCCAGACCCAGGCCAGCAGCATCGCTGGCTaGGTACTGCCCATTCCTGAGCTGCTCACTCCTCTC +
Preference number: 6 (lower is better)
Translates to: APVQTQASSIAG*VLPIPELLTPL
Trigger: GAGAGGAGTGAGCAGCTCAGGAATGGGCAGTACCAAGCCAGCGATGCTGCTGGCCTGGGTCTGGACAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CAA 72 bp TCTGTGGCCAGCTTGACGCCAGCATTCACCTCTGCCTaGTCCACCTGCGAGTGCAGGAAGGCCAGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: SVASLTPAFTSA*STCECRKARRS
Trigger: CGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS GCA 72 bp ACGCCAGCATTCACCTCTGCCTTGTCCACCTGCGAGTaGAGGAAGGCCAGGAGGTCGGCCTGGGTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: TPAFTSALSTCE*RKARRSAWVFS
Trigger: AGAGAAAACCCAGGCCGACCTCCTGGCCTTCCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 72 bp GGCCCTGGGCAGTGCCAGCTGCTCCTCGTCACCTTTTaGGGTGCAGGCCAACATGTACAGGACAGAGATAGC +
Preference number: 6 (lower is better)
Translates to: GPGQCQLLLVTF*GAGQHVQDRDS
Trigger: GCTATCTCTGTCCTGTACATGTTGGCCTGCACCCCAAAAGGTGACGAGGAGCAGCTGGCACTGCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523262.5
CDS GCA 72 bp CCAGCTGCCAGCGAGCCGCTTCCTAACTCGCAGCTCTaGTTCCAATGCTCTGACAGCGCTGAAGTCACACTG +
Preference number: 6 (lower is better)
Translates to: PAASEPLPNSQL*FQCSDSAEVTL
Trigger: CAGTGTGACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGGAAGCGGCTCGCTGGCAGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS CAA 90 bp AACGCCGTCTCTCCTCACAAAGCCACAGCAGCAGCAAGAGCTGGATaGGTCTCACTACTAGTGGAAGGTCAGGACCGGACCGGCAGATGG +
Preference number: 6 (lower is better)
Translates to: NAVSPHKATAAARAG*VSLLVEGQDRTGRW
Trigger: CCATCTGCCGGTCCGGTCCTGACCTTCCACTAGTAGTGAGACCAATCCAGCTCTTGCTGCTGCTGTGGCTTTGTGAGGAGAGACGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523919.5
CDS CAA 72 bp CACCCCTGCCCGGGGACGTATGGTCTTTCCCGGTCTTaGCTGTCAGTACTCTACTCCCAGGGTTTCCACCTA +
Preference number: 6 (lower is better)
Translates to: HPCPGTYGLSRS*LSVLYSQGFHL
Trigger: TAGGTGGAAACCCTGGGAGTAGAGTACTGACAGCAAAGACCGGGAAAGACCATACGTCCCCGGGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS CAA 72 bp AAGGCTGATTCAATGGCTTCCACCAACTCATCCCGCTaGTCCTTCCTCACAGGCTTCTCCTCGGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: KADSMASTNSSR*SFLTGFSSGWR
Trigger: CCGCCACCCCGAGGAGAAGCCTGTGAGGAAGGACAAGCGGGATGAGTTGGTGGAAGCCATTGAATCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS TCA 72 bp TATCGAAAGGCACTGCTGCATACTCTGTGGCCAGCTTaGCGCCAGCATTCACCTCTGCCTTGTCCACCTGCG +
Preference number: 6 (lower is better)
Translates to: YRKALLHTLWPA*RQHSPLPCPPA
Trigger: CGCAGGTGGACAAGGCAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS GCA 72 bp AGACCACAGGAAGCATGCGTTTGGGGCCCCCGGAGCTaGTTGCATCCATTTCCTTCTAGAACGAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RPQEACVWGPRS*LHPFPSRTSSA
Trigger: GGCAGAACTCGTTCTAGAAGGAAATGGATGCAAGCAGCTCCGGGGGCCCCAAACGCATGCTTCCTGTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000517651.5
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523227.5
ENST00000523262.5
ENST00000524213.5
CDS GCA 72 bp AGCGAGCCGCTTCCTAACTCGCAGCTCTGCTTCCAATaGTCTGACAGCGCTGAAGTCACACTGGGGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SEPLPNSQLCFQ*SDSAEVTLGFP
Trigger: TGGAAACCCCAGTGTGACTTCAGCGCTGTCAGAGCATTGGAAGCAGAGCTGCGAGTTAGGAAGCGGCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS CCA 72 bp GGCAGATCACCTGAGCTCAGGAGTTTGAGACCAGCCTaGTCAACGTTGCAAAACGCCGTCTCTGGGGGTTCA +
Preference number: 6 (lower is better)
Translates to: GRSPELRSLRPA*STLQNAVSGGS
Trigger: TGAACCCCCAGAGACGGCGTTTTGCAACGTTGACCAGGCTGGTCTCAAACTCCTGAGCTCAGGTGATCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524112.1
CDS CAA 90 bp AGAGTAAAGCTATCGAAAGGCACTGCTGCATACTCTGTGGCCAGCTaGACGCCAGCATTCACCTCTGCCTTGTCCACCTGCGAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RVKLSKGTAAYSVAS*TPAFTSALSTCECR
Trigger: CCTGCACTCGCAGGTGGACAAGGCAGAGGTGAATGCTGGCGTCAAGCTGGCCACAGAGTATGCAGCAGTGCCTTTCGATAGCTTTACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000519222.5
ENST00000522854.5
CDS CCA 72 bp TCTGCTTCCAATGCTCTGACAGCGCTGAAGTCACACTaGGGTTTCCAGGTTGGGGTCAGGAGGGAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: SASNALTALKSH*GFQVGVRRESA
Trigger: AGCACTTTCCCTCCTGACCCCAACCTGGAAACCCCAGTGTGACTTCAGCGCTGTCAGAGCATTGGAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000519222.5
CDS CCA 72 bp TCACTACTAGTGGAAGGTCAGGACCGGACCGGCAGATaGTCAGCTCCCCACATTTTATGCCTACTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SLLVEGQDRTGR*SAPHILCLLLP
Trigger: AGGGAGCAGTAGGCATAAAATGTGGGGAGCTGACCATCTGCCGGTCCGGTCCTGACCTTCCACTAGTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000523919.5
CDS GCA 72 bp TTCCTTGAAATAGGAAGGCAGCAGGTGACCCCCAAATaGCTTCTGGTTGTTGGCCGGGGCTTTGCTACACAG +
Preference number: 6 (lower is better)
Translates to: FLEIGRQQVTPK*LLVVGRGFATQ
Trigger: CTGTGTAGCAAAGCCCCGGCCAACAACCAGAAGGCATTTGGGGGTCACCTGCTGCCTTCCTATTTCAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517651.5
CDS CCA 72 bp GGCAGATCACCTGAGCTCAGGAGTTTGAGACCAGCCTaGTCAACGTTGCAAAACGCCGTCTCTCCTCACAAA +
Preference number: 6 (lower is better)
Translates to: GRSPELRSLRPA*STLQNAVSPHK
Trigger: TTTGTGAGGAGAGACGGCGTTTTGCAACGTTGACCAGGCTGGTCTCAAACTCCTGAGCTCAGGTGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523919.5
CDS CCA 72 bp ACCCTGGAGACCGTGATTTGCCATTGCCAGACAGGATaGACGGGAACAGATAGGCAACTGTGTGCGATCACA +
Preference number: 6 (lower is better)
Translates to: TLETVICHCQTG*TGTDRQLCAIT
Trigger: TGTGATCGCACACAGTTGCCTATCTGTTCCCGTCCATCCTGTCTGGCAATGGCAAATCACGGTCTCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523227.5
CDS TCA 72 bp GCTCCTCTGGGTCAAAATTACCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCTCCGTGCAATTCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: APLGQNYLGVFP*NRKAAPCNSGP
Trigger: TGGCCCCGAATTGCACGGAGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS TCA 72 bp TCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SKFSPSFPSQPS*CAANSKRGPPH
Trigger: GTGAGGAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454498.6
CDS TCA 72 bp TCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACAGCGAAGG +
Preference number: 6 (lower is better)
Translates to: SKFSPSFPSQPS*CAANSKRGQRR
Trigger: CCTTCGCTGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517494.1
CDS TCA 72 bp GGGCTTCTGGAAGGGAAAAGAGGAGCCTGGCCCTTCTaGATCTCTCTACTTCCTGCCTGCTGGTTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: GLLEGKRGAWPF*ISLLPACWLSF
Trigger: AAAACTCAACCAGCAGGCAGGAAGTAGAGAGATTCAGAAGGGCCAGGCTCCTCTTTTCCCTTCCAGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522732.1
CDS TCA 72 bp GCTCCTCTGGGTCAAAATTACCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGAGCGAAGGTCAGGAACCCCT +
Preference number: 6 (lower is better)
Translates to: APLGQNYLGVFP*NRKAERRSGTP
Trigger: AGGGGTTCCTGACCTTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523262.5
CDS GCA 72 bp GTGATCCAGTGGTTCCTTTTGGCCAGATGCAGGTACTaGCCAGTCCAAAGCTCAATGTCTTTCCAGCAGATG +
Preference number: 6 (lower is better)
Translates to: VIQWFLLARCRY*PVQSSMSFQQM
Trigger: CATCTGCTGGAAAGACATTGAGCTTTGGACTGGGCAGTACCTGCATCTGGCCAAAAGGAACCACTGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522732.1
CDS CCA 72 bp GAGGGAGAGGAAAGGCTAAAAAGGCAAGTGGAGTGTTaGGTAATAAAAGATCCACCGCCACCTCCAGCACAC +
Preference number: 6 (lower is better)
Translates to: EGEERLKRQVEC*VIKDPPPPPAH
Trigger: GTGTGCTGGAGGTGGCGGTGGATCTTTTATTACCCAACACTCCACTTGCCTTTTTAGCCTTTCCTCTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517494.1
CDS CCA 72 bp CCGTCTCTGGGGGTTCAAGAAGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCTGGGTCAAAATTACCT +
Preference number: 6 (lower is better)
Translates to: PSLGVQEGKVRR*LHHCSSGSKLP
Trigger: AGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCCTTCTTGAACCCCCAGAGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524112.1
CDS CAA 72 bp CTCTCCTCCAACCACAAGTTAAGCCGAAGGAGCCGCTaGCTGGTTGAGTTGACACTCTCTAGTAAATCCTGG +
Preference number: 6 (lower is better)
Translates to: LSSNHKLSRRSR*LVELTLSSKSW
Trigger: CCAGGATTTACTAGAGAGTGTCAACTCAACCAGCAAGCGGCTCCTTCGGCTTAACTTGTGGTTGGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332246.10
ENST00000522573.5
CDS TCA 72 bp TCCAAGTTTTCACCTTCATTCCCATCACAGCCTTCCTaGTGTGCAGCCAACAGCAAGAGGGGACCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: SKFSPSFPSQPS*CAANSKRGPFL
Trigger: AAGGAAAGGTCCCCTCTTGCTGTTGGCTGCACATCAGGAAGGCTGTGATGGGAATGAAGGTGAAAACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332246.10
CDS GCA 72 bp TGCTCAATGCACATCTCCCTGAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTTTTTGCTAGAGGCACG +
Preference number: 6 (lower is better)
Translates to: CSMHISLKFCMN*RNLSTLFARGT
Trigger: CGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAGATGTGCATTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000454498.6
ENST00000522854.5
CDS CAA 72 bp GGAGAGGGAGGAAGAATGCGTCCTAGACCCTATCTCTaGCTTGCAATCAAAATAACCTCATCAGGGCCATCC +
Preference number: 6 (lower is better)
Translates to: GEGGRMRPRPYL*LAIKITSSGPS
Trigger: GGATGGCCCTGATGAGGTTATTTTGATTGCAAGCAAGAGATAGGGTCTAGGACGCATTCTTCCTCCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518542.1
CDS CAA 90 bp ACAAAGGTTCTCTCCTCCAACCACAAGTTAAGCCGAAGGAGCCGCTaGCTGGTTGAGTTGACACTCTCTAGTAAATCCTGGCATAACTGG +
Preference number: 6 (lower is better)
Translates to: TKVLSSNHKLSRRSR*LVELTLSSKSWHNW
Trigger: CCAGTTATGCCAGGATTTACTAGAGAGTGTCAACTCAACCAGCAAGCGGCTCCTTCGGCTTAACTTGTGGTTGGAGGAGAGAACCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332246.10
ENST00000522573.5
CDS CAA 90 bp GAAACAGGTGGAGAGGGAGGAAGAATGCGTCCTAGACCCTATCTCTaGCTTGCAATCAAAATAACCTCATCAGGGCCATCCACATGTTCC +
Preference number: 6 (lower is better)
Translates to: ETGGEGGRMRPRPYL*LAIKITSSGPSTCS
Trigger: GGAACATGTGGATGGCCCTGATGAGGTTATTTTGATTGCAAGCAAGAGATAGGGTCTAGGACGCATTCTTCCTCCCTCTCCACCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518542.1
CDS GCA 72 bp GTTCAAGAAGGGAAGGTTAGGAGGTGGCTACATCATTaGTCCTCTGGGTCAAAATTACCTTGGCGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: VQEGKVRRWLHH*SSGSKLPWRLS
Trigger: GGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCCTTCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517651.5
ENST00000519222.5
ENST00000520003.5
ENST00000522573.5
ENST00000522854.5
ENST00000523227.5
ENST00000523262.5
ENST00000523919.5
ENST00000524112.1
ENST00000524213.5
CDS GCA 72 bp AAAACTTCATCAGCAGGCCTGAAATTCTGCATGAACTaGCGGAACTTGTCCACCCTTTTTGCTAGAGGCACG +
Preference number: 6 (lower is better)
Translates to: KTSSAGLKFCMN*RNLSTLFARGT
Trigger: CGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGCCTGCTGATGAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397998.7
ENST00000518542.1
ENST00000519222.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQLR
Trigger: ACGGAGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397998.7
CDS CAA 72 bp TCAGCAGGCCTGAAATTCTGCATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGAGGCACGATAACATTG +
Preference number: 6 (lower is better)
Translates to: SAGLKFCMNCRN*STLFARGTITL
Trigger: CAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGCCTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397998.7
ENST00000518542.1
ENST00000519222.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQAG
Trigger: TCCAGCCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520003.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQQV
Trigger: CACCTGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517651.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQPK
Trigger: CTTCGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524213.5
CDS CAA 90 bp ATGGGGCCGAATGGTCGAAATAAGATGAGCCGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTGAGCTCATACAATGTCCCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: MGPNGRNKMSRLNSC*WSPLKVSSYNVPLS
Trigger: GGACAAAGGGACATTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS CAA 90 bp GGTAGATCCTCCGAAGAACAACAAGCCCAAATGTCTCCACGGATGTaGACTTCTGATAAGCAATCTCAATGGAAACAGGTGGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GRSSEEQQAQMSPRM*TSDKQSQWKQVERE
Trigger: CTCCCTCTCCACCTGTTTCCATTGAGATTGCTTATCAGAAGTCAACATCCGTGGAGACATTTGGGCTTGTTGTTCTTCGGAGGATCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518542.1
CDS CAA 90 bp GGTCGAAATAAGATGAGCCGTTTGAATTCGTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAATGTCCCTTTGTCCCTTTCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: GRNKMSRLNSCLWSP*KVSSYNVPLSLSVR
Trigger: CCGAACAGAAAGGGACAAAGGGACATTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS CAA 90 bp TGCTCAATGCACATCTCCCTGAAATTCTGCATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGAGGCACGATAACATTGATAAGCGTG +
Preference number: 6 (lower is better)
Translates to: CSMHISLKFCMNCRN*STLFARGTITLISV
Trigger: CACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAGATGTGCATTGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000454498.6
ENST00000522854.5
CDS TCA 72 bp GCTCCTCTGGGTCAAAATTACCTTGGCGTCTTTCCTTaGAATAGGAAGGCAGCCCAAAAAGCAGGATGGTAT +
Preference number: 6 (lower is better)
Translates to: APLGQNYLGVFP*NRKAAQKAGWY
Trigger: ATACCATCCTGCTTTTTGGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000454498.6
ENST00000519222.5
ENST00000523919.5
ENST00000524112.1
CDS CCA 72 bp TTATGTCTGGGGGTTCAAGAAGGGAAGGTTAGGAGGTaGCTACATCATTGCTCCTCTGGGTCAAAATTACCT +
Preference number: 6 (lower is better)
Translates to: LCLGVQEGKVRR*LHHCSSGSKLP
Trigger: AGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCACCTCCTAACCTTCCCTTCTTGAACCCCCAGACATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454498.6
ENST00000523919.5
CDS CAA 72 bp CACATCTCCCTGAAATTCTGCATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGAGGCACGATAACATTG +
Preference number: 6 (lower is better)
Translates to: HISLKFCMNCRN*STLFARGTITL
Trigger: CAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGGAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332246.10
ENST00000454498.6
ENST00000522854.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGCCCAAA +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQPK
Trigger: TTTGGGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000454498.6
ENST00000519222.5
ENST00000523919.5
ENST00000524112.1
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGCTGTAC +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQLY
Trigger: GTACAGCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523227.5
CDS CAA 72 bp GTGGCTACATCATTGCTCCTCTGGGTCAAAATTACCTaGGCGTCTTTCCTTGAAATAGGAAGGCAGAGCGAA +
Preference number: 6 (lower is better)
Translates to: VATSLLLWVKIT*ASFLEIGRQSE
Trigger: TTCGCTCTGCCTTCCTATTTCAAGGAAAGACGCCAAGGTAATTTTGACCCAGAGGAGCAATGATGTAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523262.5
CDS CAA 90 bp AAAACTTCATCAGCAGGCCTGAAATTCTGCATGAACTGCCGGAACTaGTCCACCCTTTTTGCTAGAGGCACGATAACATTGATAAGCGTG +
Preference number: 6 (lower is better)
Translates to: KTSSAGLKFCMNCRN*STLFARGTITLISV
Trigger: CACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGGCCTGCTGATGAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397998.7
ENST00000518542.1
ENST00000519222.5
CDS CAA 72 bp AAGATGAGCCGTTTGAATTCGTGTTTGTGGTCCCCTTaGAAGGTGAGCTCATACAATGTCCCTTTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: KMSRLNSCLWSP*KVSSYNVPLSL
Trigger: AAGGGACAAAGGGACATTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS CAA 90 bp TTCACTTTCATGATGGGGCCGAATGGTCGAAATAAGATGAGCCGTTaGAATTCGTGTTTGTGGTCCCCTTTGAAGGTGAGCTCATACAAT +
Preference number: 6 (lower is better)
Translates to: FTFMMGPNGRNKMSR*NSCLWSPLKVSSYN
Trigger: ATTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATTCGGCCCCATCATGAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS CAA 72 bp AATGGTCGAAATAAGATGAGCCGTTTGAATTCGTGTTaGTGGTCCCCTTTGAAGGTGAGCTCATACAATGTC +
Preference number: 6 (lower is better)
Translates to: NGRNKMSRLNSC*WSPLKVSSYNV
Trigger: GACATTGTATGAGCTCACCTTCAAAGGGGACCACAAACACGAATTCAAACGGCTCATCTTATTTCGACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS CCA 72 bp GTGCTATGGTTCAATCTGTGCTACAGAGTTCACACTTaGTCAGGCTTTTCCACGATGTGTAAAATTCTACAA +
Preference number: 6 (lower is better)
Translates to: VLWFNLCYRVHT*SGFSTMCKILQ
Trigger: TTGTAGAATTTTACACATCGTGGAAAAGCCTGACCAAGTGTGAACTCTGTAGCACAGATTGAACCATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523227.5
CDS CAA 72 bp AACTTGTCCACCCTTTTTGCTAGAGGCACGATAACATaGATAAGCGTGTTGGCCATGTTGAGCTTTTCATTT +
Preference number: 6 (lower is better)
Translates to: NLSTLFARGTIT*ISVLAMLSFSF
Trigger: AAATGAAAAGCTCAACATGGCCAACACGCTTATCAATGTTATCGTGCCTCTAGCAAAAAGGGTGGACAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000518542.1
ENST00000519222.5
ENST00000522854.5
CDS TCA 72 bp CTTTTAAAGGATGATCTTGCAGGCAGAAGCAATGACTaGAGTGAAATCTCCAAGTTTTCACCTTCATTCCCA +
Preference number: 6 (lower is better)
Translates to: LLKDDLAGRSND*SEISKFSPSFP
Trigger: TGGGAATGAAGGTGAAAACTTGGAGATTTCACTTCAGTCATTGCTTCTGCCTGCAAGATCATCCTTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000332246.10
ENST00000397998.7
ENST00000454498.6
ENST00000517494.1
ENST00000517651.5
ENST00000519222.5
ENST00000520003.5
ENST00000522854.5
ENST00000523227.5
ENST00000523262.5
ENST00000524213.5
CDS GCA 72 bp AATGAAATGTCAGATCAGGTGTTAGGATTTGATCTGTaGTATGGTTCAATCTGTGCTACAGAGTTCACACTT +
Preference number: 6 (lower is better)
Translates to: NEMSDQVLGFDL*YGSICATEFTL
Trigger: AAGTGTGAACTCTGTAGCACAGATTGAACCATAGCACAGATCAAATCCTAACACCTGATCTGACATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523227.5