Pregenerated sensors for CRIP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000146215Ensembl transcript IDs: ENST00000274990.4, ENST00000372569.8, ENST00000416431.5, ENST00000451294.5, ENST00000477866.1, ENST00000485819.1, ENST00000487744.1
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGTTTTGTAGCTTCCATTaGACCATGAGGGGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: GCDGQEEDTLQNGLFPNQFCSFH*TMRGMM Trigger: CATCATGCCCCTCATGGTCCAATGGAAGCTACAAAA...CTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| 3UTR-3UTR CCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGCTCTCTGGCCTACCATaGAGCCTAGGCCCAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NKHKFYEYLEAPECAGERLSGLP*SLGPGP Trigger: GGGGCCTGGGCCTAGGCTCCATGGTAGGCCAGAGAG...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| 3UTR-3UTR TCA 90 bp | TACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGGTTGTGATGGCCAGGAGGAGTGTGAGCGTCTCATTTaGATTTTATCTTCACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YLEAPECAGERGCDGQEECERLI*ILSSLG Trigger: ACCCAGTGAAGATAAAATTCAAATGAGACGCTCACA...CTCCTCCTGGCCATCACAACCCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451294.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCTGAAATTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAACTCTCTGGCCTACCATaGAGCCTAGGCCCAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QRLKFNKHKFYEYLEAPELSGLP*SLGPGP Trigger: GGGGCCTGGGCCTAGGCTCCATGGTAGGCCAGAGAG...TTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAATTTCAGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGTTTTGTAGCTTCCATTaGACCATGAGGGGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: INTSFMSTLKLQNVLGKGFCSFH*TMRGMM Trigger: CATCATGCCCCTCATGGTCCAATGGAAGCTACAAAA...CCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| 3UTR CCA 72 bp | AATTGGCAGAGAAAGTCTAGACTCTCTGGCCTACCATaGAGCCTAGGCCCAGGCCCCCAAGATCCCACCTTC | + |
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Preference number: 3 (lower is better) Translates to: NWQRKSRLSGLP*SLGPGPQDPTF Trigger: GAAGGTGGGATCTTGGGGGCCTGGGCCTAGGCTCCATGGTAGGCCAGAGAGTCTAGACTTTCTCTGCCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | GAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTTCAGGCGTCTTGTGGCAACGCTaGCACCTCAGACACGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: ERESPITKGPGSVVQGSGVLWQR*HLRHGR Trigger: CCGACCGTGTCTGAGGTGCCAGCGTTGCCACAAGAC...GCCTGAACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | GAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTTCAGGCAGCCAGGGCTGGGAGTaGGGGGATTGTACAAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ERESPITKGPGSVVQGSGSQGWE*GDCTSR Trigger: CCTACTTGTACAATCCCCCCACTCCCAGCCCTGGCT...GCCTGAACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | ACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTGGGCTTTTCTTGCCTTaGGGGAGGCCAGTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TPERESPITKGPGSVVQGGLFLP*GRPVLG Trigger: GCCAAGGACTGGCCTCCCCCAAGGCAAGAAAAGCCC...ACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | GGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCGCAGTCAGGGTCTTGTaGCAACGCTGGCACCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSALAGFTIIVMPLGEAGAVRVL*QRWHLR Trigger: TCTGAGGTGCCAGCGTTGCCACAAGACCCTGACTGC...GCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | CACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGGTCTTGTGGCAACGCTaGCACCTCAGACACGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: HPYWLSPGWFYHHRDATGVLWQR*HLRHGR Trigger: CCGACCGTGTCTGAGGTGCCAGCGTTGCCACAAGAC...CCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | TCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGGGGCTGCCCACCTTTaGGGCCAAACAGGTAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SPMFTPERESPITKGPGSGAAHL*GQTGSR Trigger: ACGGCTACCTGTTTGGCCCCAAAGGTGGGCAGCCCC...AGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTACTCTCTGGCCTACCATaGAGCCTAGGCCCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KGVVMARRRIPFKTGCSLLSGLP*SLGPGP Trigger: GGGGCCTGGGCCTAGGCTCCATGGTAGGCCAGAGAG...TAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR TCA 90 bp | TTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGCCATCATGCTCAGCATaGCTCCCAGCAGTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: FTPERESPITKGPGSVVQPSCSA*LPAVRV Trigger: GACCCTGACTGCTGGGAGTCATGCTGAGCATGATGG...CTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR TCA 90 bp | CTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGCGTGATGCCACTGGGTaGGGCAGGCAAGAAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTGSALAGFTIIVMPLGERDATG*GRQETG Trigger: GCCTGTTTCTTGCCTGCCTCACCCAGTGGCATCACG...CTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR GCA 90 bp | ACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTGCGAAGAAAACAGGTTaGTGGCAACGCGGACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TPERESPITKGPGSVVQGAKKTG*WQRGQV Trigger: GACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGC...ACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR GCA 90 bp | CCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGTGTCTGGGATGGGGCTaGCCACCTTTGGGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PHRQCSHLRERALSPKALCLGWG*PPLGPN Trigger: GTTTGGCCCCAAAGGTGGGCAGCCCCATCCCAGACA...CAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | CACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTTGAGAGCCCCATAGCATaGCTTGTGGCAGTATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLRERALSPKALGLWCRVESPIA*LVAVWP Trigger: AGGCCATACTGCCACAAGCCATGCTATGGGGCTCTC...AACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTGGGCTTTTCTTGCCTTaGGGGAGGCCAGTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: ERGCDGQEEDTLQNGLFPGLFLP*GRPVLG Trigger: GCCAAGGACTGGCCTCCCCCAAGGCAAGAAAAGCCC...AGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | TACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGGTTGTGATGGCCAGGAGGAGGTCTTGTGGCAACGCTaGCACCTCAGACACGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: YLEAPECAGERGCDGQEEVLWQR*HLRHGR Trigger: CCGACCGTGTCTGAGGTGCCAGCGTTGCCACAAGAC...CTCCTCCTGGCCATCACAACCCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | CTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGCACCCGCACCCTTACTaGCTCAGCCCTGGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LTGSALAGFTIIVMPLGEHPHPY*LSPGWF Trigger: AAACCAGCCAGGGCTGAGCCAGTAAGGGTGCGGGTG...CTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR TCA 90 bp | ACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTCCATCATGCTCAGCATaGCTCCCAGCAGTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TLTGSALAGFTIIVMPLGPSCSA*LPAVRV Trigger: GACCCTGACTGCTGGGAGTCATGCTGAGCATGATGG...ACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | CCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGGGGACAGGATGCTGTaGCAGCGCTCACATTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PMFTPERESPITKGPGSVGDRML*QRSHFR Trigger: CCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCC...CACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTGGGGACAGGATGCTGTaGCAGCGCTCACATTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERGCDGQEEDTLQNGLFPGDRML*QRSHFR Trigger: CCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCC...AGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCAAGAAAAGCCAGGGCTGGGAGTaGGGGGATTGTACAAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ALAGFTIIVMPLGEAGKKSQGWE*GDCTSR Trigger: CCTACTTGTACAATCCCCCCACTCCCAGCCCTGGCT...TTTCTTGCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | CCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGCAGTCAGGGTCTTGTaGCAACGCTGGCACCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PHRQCSHLRERALSPKALAVRVL*QRWHLR Trigger: TCTGAGGTGCCAGCGTTGCCACAAGACCCTGACTGC...CAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | TTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGTATCACCAAAGGCCCTaGGTCTGTGGTGCAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FTPERESPITKGPGSVVQYHQRP*VCGAGF Trigger: GAACCCTGCACCACAGACCCAGGGCCTTTGGTGATA...CTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | AAAAATTGGCAGAGAAAGTCTAGACTCTCTGGCCTACCATGGAGCCTAGGCCCACTCTCTGGCCTACCATaGAGCCTAGGCCCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KNWQRKSRLSGLPWSLGPLSGLP*SLGPGP Trigger: GGGGCCTGGGCCTAGGCTCCATGGTAGGCCAGAGAG...TGGGCCTAGGCTCCATGGTAGGCCAGAGAGTCTAGACTTTCTCTGCCAATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | CACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTCAGTTTTCTTGCCTTaGGGGAGGCCAGTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: HPYWLSPGWFYHHRDATGSVFLP*GRPVLG Trigger: GCCAAGGACTGGCCTCCCCCAAGGCAAGAAAACTGA...CCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCAAGAAAGGACCTAGAGGGCTTTaGGGCCAAACAGGTAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ALAGFTIIVMPLGEAGKKGPRGL*GQTGSR Trigger: ACGGCTACCTGTTTGGCCCCAAAGCCCTCTAGGTCC...TTTCTTGCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | GGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCTGGCTCAGCCCTGGCTaGTTTTACCATCATCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GSALAGFTIIVMPLGEAGWLSPG*FYHHRD Trigger: ATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCA...GCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR TCA 90 bp | CCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGCGAGGTCTCCCCAGTaGATGTCTTCATATGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PMFTPERESPITKGPGSVARSPQ*MSSYGE Trigger: CTCCCCATATGAAGACATTCACTGGGGAGACCTCGC...CACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR TCA 90 bp | GGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGGCGAGGTCTCCCCAGTaGATGTCTTCATATGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GCDGQEEDTLQNGLFPNQARSPQ*MSSYGE Trigger: CTCCCCATATGAAGACATTCACTGGGGAGACCTCGC...CTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR TCA 90 bp | CGCACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGTTTTACCATCATCGTaGTGCCACTGGGTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RTLTGSALAGFTIIVMPLVLPSS*CHWVRQ Trigger: CTGCCTCACCCAGTGGCATCACGATGATGGTAAAAC...CAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAGGGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGTGCAGGGTTCACTCAGACACGGTCGGTaGCAATTTCTGCCTAATGAC | + |
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Preference number: 4 (lower is better) Translates to: PERESPITKGPGSVVQGSLRHGR*QFLPND Trigger: GTCATTAGGCAGAAATTGGCACCGACCGTGTCTGAG...TGAACCCTGCACCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCAAGAAACCTTCTCAGTTTTCTTaGCTTGGGGGAGGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ALAGFTIIVMPLGEAGKKPSQFS*LGGGQS Trigger: GGACTGGCCTCCCCCAAGGCAAGAAAACTGAGAAGG...TTTCTTGCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | CCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGTGGCTTGTGGCAGTATaGCCTCCCATTGTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PMFTPERESPITKGPGSVWLVAV*PPIVLC Trigger: GCAGAGCACAATGGGAGGCCATACTGCCACAAGCCA...CACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | GGGACTGGAGATTTTTGTAGCTTCCATTGGACCATGAGGGGCATGATGGGAGGCGCAGTCAGGGTCTTGTaGCAACGCTGGCACCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GTGDFCSFHWTMRGMMGGAVRVL*QRWHLR Trigger: TCTGAGGTGCCAGCGTTGCCACAAGACCCTGACTGC...GCCTCCCATCATGCCCCTCATGGTCCAATGGAAGCTACAAAAATCTCCAGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR TCA 90 bp | CAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGGGCCAATGTTCACACCTaGGAGAGAGAGCCCTATCAC | + |
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Preference number: 4 (lower is better) Translates to: QCSHLRERALSPKALGLWANVHT*EREPYH Trigger: GTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGC...CCACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR GCA 90 bp | CGCACCCTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGCTCAGACACGGTCGGTaGCAATTTCTGCCTAATGAC | + |
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Preference number: 4 (lower is better) Translates to: RTLTGSALAGFTIIVMPLLRHGR*QFLPND Trigger: GTCATTAGGCAGAAATTGGCACCGACCGTGTCTGAG...CAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAGGGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR CCA 90 bp | CCCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTAAGAAAACAGGTTGCTaGCAACGCGGACAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PTSPMFTPERESPITKGPKKTGC*QRGQVQ Trigger: CTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTT...AGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCAGGCAAGTTACTGGCTCAGCCCTaGCTGGTTTTACCATCATCG | + |
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Preference number: 4 (lower is better) Translates to: SALAGFTIIVMPLGEAGKLLAQP*LVLPSS Trigger: CGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAA...CTTGCCTGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR TCA 90 bp | CATGGGACTGGAGATTTTTGTAGCTTCCATTGGACCATGAGGGGCATGATGGGACCATCATGCTCAGCATaGCTCCCAGCAGTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HGTGDFCSFHWTMRGMMGPSCSA*LPAVRV Trigger: GACCCTGACTGCTGGGAGTCATGCTGAGCATGATGG...TCCCATCATGCCCCTCATGGTCCAATGGAAGCTACAAAAATCTCCAGTCCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR GCA 90 bp | TACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGGTTGTGATGGCCAGGAGGAGCTCAGACACGGTCGGTaGCAATTTCTGCCTAATGAC | + |
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Preference number: 4 (lower is better) Translates to: YLEAPECAGERGCDGQEELRHGR*QFLPND Trigger: GTCATTAGGCAGAAATTGGCACCGACCGTGTCTGAG...CTCCTCCTGGCCATCACAACCCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR GCA 90 bp | CCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTGTGCTTCAGGCATGTACATaGCATCCCAGTGTCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PMFTPERESPITKGPGSVLQACT*HPSVWD Trigger: ATCCCAGACACTGGGATGGCATGTACATGCCTGAAG...CACAGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | TGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGATAAAGAAAACAGGTTGCTaGCAACGCGGACAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CDGQEEDTLQNGLFPNQIKKTGC*QRGQVQ Trigger: CTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTT...TATCTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR GCA 90 bp | CATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTGTCGGTGCCAATTTCTaGCTAATGACATCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRQCSHLRERALSPKALGVGANF*LMTSPS Trigger: AGAAGGTGATGTCATTAGGCAGAAATTGGCACCGAC...ACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTGTCGGTGCCAATTTCTaGCTAATGACATCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERGCDGQEEDTLQNGLFPVGANF*LMTSPS Trigger: AGAAGGTGATGTCATTAGGCAGAAATTGGCACCGAC...AGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR GCA 90 bp | CTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGTCGGTGCCAATTTCTaGCTAATGACATCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGSALAGFTIIVMPLGEVGANF*LMTSPS Trigger: AGAAGGTGATGTCATTAGGCAGAAATTGGCACCGAC...CTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS-3UTR GCA 90 bp | CCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGCACAGACCATGTACATaGCATACTTCAGGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHRQCSHLRERALSPKALHRPCT*HTSGMY Trigger: GTACATGCCTGAAGTATGGCATGTACATGGTCTGTG...CAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | CCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGTGAATGTCTTCATATaGGGAGGGCTTTTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHRQCSHLRERALSPKALVNVFI*GGLFLP Trigger: AGGCAAGAAAAGCCCTCCCCATATGAAGACATTCAC...CAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CCA 90 bp | TACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGGTTGTGATGGCCAGGAGGAGGTGAATGTCTTCATATaGGGAGGGCTTTTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLEAPECAGERGCDGQEEVNVFI*GGLFLP Trigger: AGGCAAGAAAAGCCCTCCCCATATGAAGACATTCAC...CTCCTCCTGGCCATCACAACCCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTTTTTGTAGCTTCCATTaGACCATGAGGGGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: ERGCDGQEEDTLQNGLFPFCSFH*TMRGMM Trigger: CATCATGCCCCTCATGGTCCAATGGAAGCTACAAAA...AGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR GCA 90 bp | CATGGGACTGGAGATTTTTGTAGCTTCCATTGGACCATGAGGGGCATGATGGGACTCAGACACGGTCGGTaGCAATTTCTGCCTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGTGDFCSFHWTMRGMMGLRHGR*QFLPND Trigger: GTCATTAGGCAGAAATTGGCACCGACCGTGTCTGAG...TCCCATCATGCCCCTCATGGTCCAATGGAAGCTACAAAAATCTCCAGTCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | ATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGAGCCAGGGCTGGGAGTaGGGGGATTGTACAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: INTSFMSTLKLQNVLGKGSQGWE*GDCTSR Trigger: CCTACTTGTACAATCCCCCCACTCCCAGCCCTGGCT...CCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGTCTTGTGGCAACGCTaGCACCTCAGACACGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NKHKFYEYLEAPECAGERVLWQR*HLRHGR Trigger: CCGACCGTGTCTGAGGTGCCAGCGTTGCCACAAGAC...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | GTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGAGAATTTTATCTTCACTaGGTCATAGATGTAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVMARRRIPFKTGCSLTREFYLH*VIDVAA Trigger: GGCTGCTACATCTATGACCCAGTGAAGATAAAATTC...TCTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR TCA 90 bp | TGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGATATGTGAGCGTCTCATTTaGATTTTATCTTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CDGQEEDTLQNGLFPNQICERLI*ILSSLG Trigger: ACCCAGTGAAGATAAAATTCAAATGAGACGCTCACA...TATCTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR TCA 90 bp | TTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAGTTCACACCTCAGCATaGCTCCCAGCAGTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNKHKFYEYLEAPECAGEVHTSA*LPAVRV Trigger: GACCCTGACTGCTGGGAGTCATGCTGAGGTGTGAAC...TTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | TTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAGCAGTCAGGGTCTTGTaGCAACGCTGGCACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FNKHKFYEYLEAPECAGEAVRVL*QRWHLR Trigger: TCTGAGGTGCCAGCGTTGCCACAAGACCCTGACTGC...TTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR GCA 90 bp | TTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAGCGAAGAAAACAGGTTaGTGGCAACGCGGACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNKHKFYEYLEAPECAGEAKKTG*WQRGQV Trigger: GACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGC...TTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGCTGAAATTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAAGAGAGCCCCATAGCATaGCTTGTGGCAGTATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLKFNKHKFYEYLEAPEESPIA*LVAVWP Trigger: AGGCCATACTGCCACAAGCCATGCTATGGGGCTCTC...TTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAATTTCAGCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGCAATGTTCACACCTTTaGGGCCAAACAGGTAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NKHKFYEYLEAPECAGERQCSHL*GQTGSR Trigger: ACGGCTACCTGTTTGGCCCCAAAGGTGTGAACATTG...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGTTTTGTAGCTTCCATTaGACCATGAGGGGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: NKHKFYEYLEAPECAGERFCSFH*TMRGMM Trigger: CATCATGCCCCTCATGGTCCAATGGAAGCTACAAAA...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR TCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGTGTGAGCGTCTCATTTaGATTTTATCTTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKHKFYEYLEAPECAGERCERLI*ILSSLG Trigger: ACCCAGTGAAGATAAAATTCAAATGAGACGCTCACA...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CCA 90 bp | AATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGAATTTTATCTTCACTaGGTCATAGATGTAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKHKFYEYLEAPECAGEREFYLH*VIDVAA Trigger: GGCTGCTACATCTATGACCCAGTGAAGATAAAATTC...CCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS CCA 90 bp | GGCCTCCCATTGTGCTCTGCATGCCCGCCAGGGGACAGGATGCTGTaGCAGCGCTCACATTTCAGGCAGAAGCGGTGCCAGTTCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPLCSACPPGDRML*QRSHFRQKRCQFLP Trigger: GGGCAAGAACTGGCACCGCTTCTGCCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCCTGGCGGGCATGCAGAGCACAATGGGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000274990.4 ENST00000372569.8 ENST00000485819.1 |
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| CDS CCA 90 bp | CGGGTGGTGCGGAGACTACCAGCCGCTGCAGGTGAAAAGGGTGTCTaGGACTACACTGTGGCTAGCCCTCCGCGTCCTCAGGGAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVVRRLPAAAGEKGV*DYTVASPPRPQGIQ Trigger: CTGGATTCCCTGAGGACGCGGAGGGCTAGCCACAGTGTAGTCCCAGACACCCTTTTCACCTGCAGCGGCTGGTAGTCTCCGCACCACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485819.1 |
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| CDS GCA 90 bp | CAGAGCTCTCAGAGGAAGGGAGAAGACCCGAGTGGGAGCGGGTGGTaGGGAGACTACCAGCCGCTGCAGGTGAAAAGGGTGTCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QSSQRKGEDPSGSGW*GDYQPLQVKRVSGT Trigger: AGTCCCAGACACCCTTTTCACCTGCAGCGGCTGGTAGTCTCCGCACCACCCGCTCCCACTCGGGTCTTCTCCCTTCCTCTGAGAGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485819.1 |
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| CDS CCA 90 bp | GACTACCAGCCGCTGCAGGTGAAAAGGGTGTCTGGGACTACACTGTaGCTAGCCCTCCGCGTCCTCAGGGAATCCAGCGGCTCCCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: DYQPLQVKRVSGTTL*LALRVLRESSGSHS Trigger: CGAATGGGAGCCGCTGGATTCCCTGAGGACGCGGAGGGCTAGCCACAGTGTAGTCCCAGACACCCTTTTCACCTGCAGCGGCTGGTAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485819.1 |
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| CDS CCA 90 bp | CCACAGCCAGGGCACAGCGAGGTCTCCCCAGTGAATGTCTTCATATaGGGAGGGCCTTTAAAGGGGAAGAGGCCCTGGCTATGTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQPGHSEVSPVNVFI*GGPLKGKRPWLCLR Trigger: CCTCAGACATAGCCAGGGCCTCTTCCCCTTTAAAGGCCCTCCCCATATGAAGACATTCACTGGGGAGACCTCGCTGTGCCCTGGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000477866.1 ENST00000487744.1 |
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| CDS GCA 90 bp | GCTGGCCACAGCACGGGTGTCAGGTGTTGGGGAGCACAGTGTCATTaGCTACTTCAGGGAATGGAGGGAAAGAACAGGGACCAGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGHSTGVRCWGAQCH*LLQGMEGKNRDQRR Trigger: TCTCCTCTGGTCCCTGTTCTTTCCCTCCATTCCCTGAAGTAGGCAATGACACTGTGCTCCCCAACACCTGACACCCGTGCTGTGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS GCA 90 bp | CACCAGCACCTGCCTGCATATGGTGCTGTCCTCTTTCAAAAGCCATaGTCATTCCAGAGTGCCCCACCCAGGCGCCCAAGAGTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HQHLPAYGAVLFQKP*SFQSAPPRRPRVCL Trigger: AAGGCAGACTCTTGGGCGCCTGGGTGGGGCACTCTGGAATGAGCATGGCTTTTGAAAGAGGACAGCACCATATGCAGGCAGGTGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS-3UTR CAA 90 bp | CCCACATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTCAGTATGGCCTCCCATaGTGCTCTGCATGCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTSPMFTPERESPITKGPQYGLP*CSACPP Trigger: TGGCGGGCATGCAGAGCACAATGGGAGGCCATACTG...AGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CAA 90 bp | TACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGGTTGTGATGGCCAGGAGGAGCAGTATGGCCTCCCATaGTGCTCTGCATGCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLEAPECAGERGCDGQEEQYGLP*CSACPP Trigger: TGGCGGGCATGCAGAGCACAATGGGAGGCCATACTG...CTCCTCCTGGCCATCACAACCCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CAA 90 bp | CATCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTAGGGCTTTTCTTGCCTaGGGGGAGGCCAGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRQCSHLRERALSPKALGRAFLA*GEASPW Trigger: CCAAGGACTGGCCTCCCCCAAGGCAAGAAAAGCCCT...ACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CAA 90 bp | ACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGGCACTCAGTTTTCTTGCCTaGGGGGAGGCCAGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSALAGFTIIVMPLGEALSFLA*GEASPW Trigger: CCAAGGACTGGCCTCCCCCAAGGCAAGAAAACTGAG...TGCCTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS GCA 90 bp | TGCATATGGTGCTGTCCTCTTTCAAAAGCCATGCTCATTCCAGAGTaGCCCACCCAGGCGCCCAAGAGTCTGCCTTCTACAGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CIWCCPLSKAMLIPE*PTQAPKSLPSTGPE Trigger: CTCTGGGCCTGTAGAAGGCAGACTCTTGGGCGCCTGGGTGGGGCACTCTGGAATGAGCATGGCTTTTGAAAGAGGACAGCACCATATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS CCA 90 bp | CATGTACATGCCATACTTCAGGCATGTACATGCCATCCCAGTGTCTaGGATGGGGCTGCCCACCTTTGGGGCCAAACAGGTAGCCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HVHAILQACTCHPSV*DGAAHLWGQTGSRS Trigger: GCTACGGCTACCTGTTTGGCCCCAAAGGTGGGCAGCCCCATCCCAGACACTGGGATGGCATGTACATGCCTGAAGTATGGCATGTACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS GCA 90 bp | CACATACCCACAGACCATGTACATGCCATACTTCAGGCATGTACATaGCATCCCAGTGTCTGGGATGGGGCTGCCCACCTTTGGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HIPTDHVHAILQACT*HPSVWDGAAHLWGQ Trigger: TTGGCCCCAAAGGTGGGCAGCCCCATCCCAGACACTGGGATGGCATGTACATGCCTGAAGTATGGCATGTACATGGTCTGTGGGTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS GCA 90 bp | GGGCCTTTAAAGGGGAAGAGGCCCTGGCTATGTCTGAGGTGGAGATaGCCACCAGCACCTGCCTGCATATGGTGCTGTCCTCTTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GPLKGKRPWLCLRWR*PPAPACIWCCPLSK Trigger: TTTTGAAAGAGGACAGCACCATATGCAGGCAGGTGCTGGTGGGCATCTCCACCTCAGACATAGCCAGGGCCTCTTCCCCTTTAAAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477866.1 ENST00000487744.1 |
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| CDS-3UTR CAA 90 bp | TCGCCAATGTTCACACCTGAGAGAGAGAGCCCTATCACCAAAGGCCCTGGGTCTAGCGAAGAAAACAGGTaGCTGGCAACGCGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPMFTPERESPITKGPGSSEENR*LATRTG Trigger: ACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCT...AGACCCAGGGCCTTTGGTGATAGGGCTCTCTCTCTCAGGTGTGAACATTGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAACCAGAGCGAAGAAAACAGGTaGCTGGCAACGCGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCDGQEEDTLQNGLFPNQSEENR*LATRTG Trigger: ACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCT...CTGGTTAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS-3UTR CAA 90 bp | CTTACTGGCTCAGCCCTGGCTGGTTTTACCATCATCGTGATGCCACTGGGTGAGACCTTCTCAGTTTTCTaGCCTTGGGGGAGGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTGSALAGFTIIVMPLGETFSVF*PWGRPV Trigger: GACTGGCCTCCCCCAAGGCAAGAAAACTGAGAAGGT...CTCACCCAGTGGCATCACGATGATGGTAAAACCAGCCAGGGCTGAGCCAGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000416431.5 |
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| CDS TCA 90 bp | CAGAGGAGAAAAGTTGAAGAATATGAGAGGCTGGCCTTATCCCAATaGCTCCTCTCCTTTAGATCATTCCTTCCATGGCCCTGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRRKVEEYERLALSQ*LLSFRSFLPWPWPG Trigger: CCCAGGCCAGGGCCATGGAAGGAATGATCTAAAGGAGAGGAGTCATTGGGATAAGGCCAGCCTCTCATATTCTTCAACTTTTCTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS-3UTR CAA 90 bp | AAAGGGGTTGTGATGGCCAGGAGGAGGATACCCTTCAAAACGGGCTGTTCCCTAAGTTTTATGAGTACCTaGAAGCTCCAGAATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGVVMARRRIPFKTGCSLSFMST*KLQNVL Trigger: CAGCACATTCTGGAGCTTCAAGGTACTCATAAAACT...TAGGGAACAGCCCGTTTTGAAGGGTATCCTCCTCCTGGCCATCACAACCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS CCA 90 bp | GAAAGAACAGGGACCAGAGGAGAAAAGTTGAAGAATATGAGAGGCTaGCCTTATCCCAATGACTCCTCTCCTTTAGATCATTCCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ERTGTRGEKLKNMRG*PYPNDSSPLDHSFH Trigger: ATGGAAGGAATGATCTAAAGGAGAGGAGTCATTGGGATAAGGCCAGCCTCTCATATTCTTCAACTTTTCTCCTCTGGTCCCTGTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS-3UTR CAA 90 bp | ATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAATGTGCTGGGGAAAGGGAGTTTTATGAGTACCTaGAAGCTCCAGAATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: INTSFMSTLKLQNVLGKGSFMST*KLQNVL Trigger: CAGCACATTCTGGAGCTTCAAGGTACTCATAAAACT...CCCTTTCCCCAGCACATTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372569.8 ENST00000451294.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGCTGAAATTCAATAAACACAAGTTTTATGAGTACCTTGAAGCTCCAGAAGGAGCCAACATTTTATaGAAGAAGCCACAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLKFNKHKFYEYLEAPEGANIL*KKPQRL Trigger: CAGCCTCTGTGGCTTCTTCAATAAAATGTTGGCTCC...TTCTGGAGCTTCAAGGTACTCATAAAACTTGTGTTTATTGAATTTCAGCCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS CCA 72 bp | TCTCAGAGGAAGGGAGAAGACCCGAGTGGGAGCGGGTaGTGCGGAGACTACCAGCCGCTGCAGGTGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SQRKGEDPSGSG*CGDYQPLQVKR Trigger: CCTTTTCACCTGCAGCGGCTGGTAGTCTCCGCACCACCCGCTCCCACTCGGGTCTTCTCCCTTCCTCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485819.1 |
||
| CDS GCA 72 bp | CCCAGGGAGCTCACCTTCTCAGCGAAGAAAACAGGTTaGTGGCAACGCGGACAGGTCCAGCTCATAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRELTFSAKKTG*WQRGQVQLIAP Trigger: CGGAGCTATGAGCTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCTGAGAAGGTGAGCTCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS GCA 72 bp | TGCTTCCATTCTAGGGGTAGAGTAGGGAGACCTACCTaGCTTGGATCACCTCCCTCCCCCTTGCTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: CFHSRGRVGRPT*LGSPPSPLLPT Trigger: GGTGGGCAGCAAGGGGGAGGGAGGTGATCCAAGGCAGGTAGGTCTCCCTACTCTACCCCTAGAATGGAAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477866.1 |
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| CDS CAA 72 bp | GCCCAGGGAGCTCACCTTCTCAGCGAAGAAAACAGGTaGCTGGCAACGCGGACAGGTCCAGCTCATAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AQGAHLLSEENR*LATRTGPAHSS Trigger: GGAGCTATGAGCTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCTGAGAAGGTGAGCTCCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS CCA 72 bp | GCCATACTTCAGGCATGTACATGCCATCCCAGTGTCTaGGATGGGGCTGCCCACCTTTGGGGCCAAACAGGT | + |
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Preference number: 6 (lower is better) Translates to: AILQACTCHPSV*DGAAHLWGQTG Trigger: ACCTGTTTGGCCCCAAAGGTGGGCAGCCCCATCCCAGACACTGGGATGGCATGTACATGCCTGAAGTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS CCA 72 bp | AGGGAGCTCACCTTCTCAGCGAAGAAAACAGGTTGCTaGCAACGCGGACAGGTCCAGCTCATAGCTCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: RELTFSAKKTGC*QRGQVQLIAPL Trigger: GAGCGGAGCTATGAGCTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCTGAGAAGGTGAGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372569.8 |
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| CDS CCA 72 bp | CCTCCTTTCCCTCTTCGGCCCTCTAGGGAATTAGGTTaGCCTGCCCTGCTTCCTGGAGATGAGTGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PPFPLRPSRELG*PALLPGDECLQ Trigger: CTGGAGACACTCATCTCCAGGAAGCAGGGCAGGCCAACCTAATTCCCTAGAGGGCCGAAGAGGGAAAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485819.1 |
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| CDS GCA 72 bp | CTGCCTGCATATGGTGCTGTCCTCTTTCAAAAGCCATaGTCATTCCAGAGTGCCCCACCCAGGCGCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPAYGAVLFQKP*SFQSAPPRRPR Trigger: TCTTGGGCGCCTGGGTGGGGCACTCTGGAATGAGCATGGCTTTTGAAAGAGGACAGCACCATATGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000477866.1 ENST00000487744.1 |
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| CDS CCA 72 bp | CTTCCATGGCCCTGGCCTGGGACAGACCTAAGTTCCTaGCCAGCTTTGCCTCTGACTAGCTTTGTGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: LPWPWPGTDLSS*PALPLTSFVDG Trigger: TCCATCCACAAAGCTAGTCAGAGGCAAAGCTGGCCAGGAACTTAGGTCTGTCCCAGGCCAGGGCCATGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS CAA 90 bp | CTTCCATGGCCCTGGCCTGGGACAGACCTAAGTTCCTGGCCAGCTTaGCCTCTGACTAGCTTTGTGGATGGACAGTCATTTGCCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LPWPWPGTDLSSWPA*PLTSFVDGQSFALS Trigger: AGACAGGGCAAATGACTGTCCATCCACAAAGCTAGTCAGAGGCAAAGCTGGCCAGGAACTTAGGTCTGTCCCAGGCCAGGGCCATGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS GCA 72 bp | TGCTGTCCTCTTTCAAAAGCCATGCTCATTCCAGAGTaGCCCACCCAGGCGCCCAAGAGTCTGCCTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: CCPLSKAMLIPE*PTQAPKSLPST Trigger: TGTAGAAGGCAGACTCTTGGGCGCCTGGGTGGGGCACTCTGGAATGAGCATGGCTTTTGAAAGAGGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS GCA 72 bp | ACAGACCATGTACATGCCATACTTCAGGCATGTACATaGCATCCCAGTGTCTGGGATGGGGCTGCCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: TDHVHAILQACT*HPSVWDGAAHL Trigger: AAGGTGGGCAGCCCCATCCCAGACACTGGGATGGCATGTACATGCCTGAAGTATGGCATGTACATGGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS CAA 72 bp | CCCTGGCCTGGGACAGACCTAAGTTCCTGGCCAGCTTaGCCTCTGACTAGCTTTGTGGATGGACAGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: PWPGTDLSSWPA*PLTSFVDGQSF Trigger: AAATGACTGTCCATCCACAAAGCTAGTCAGAGGCAAAGCTGGCCAGGAACTTAGGTCTGTCCCAGGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS TCA 72 bp | ACCCTGTTAGCAACTCAATCCTCAGGAAACTTGAGCTaGTATAGGAGCTGGCCACAGCACGGGTGTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TLLATQSSGNLS*YRSWPQHGCQV Trigger: CACCTGACACCCGTGCTGTGGCCAGCTCCTATATCAGCTCAAGTTTCCTGAGGATTGAGTTGCTAACAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS GCA 72 bp | GGGAAGTTGTCCACACATACCCACAGACCATGTACATaGCATACTTCAGGCATGTACATGCCATCCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GKLSTHTHRPCT*HTSGMYMPSQC Trigger: ACACTGGGATGGCATGTACATGCCTGAAGTATGGCATGTACATGGTCTGTGGGTATGTGTGGACAACTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274990.4 |
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| CDS TCA 72 bp | AAAGTTGAAGAATATGAGAGGCTGGCCTTATCCCAATaGCTCCTCTCCTTTAGATCATTCCTTCCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KVEEYERLALSQ*LLSFRSFLPWP Trigger: GGGCCATGGAAGGAATGATCTAAAGGAGAGGAGTCATTGGGATAAGGCCAGCCTCTCATATTCTTCAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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| CDS CCA 72 bp | GGGACCAGAGGAGAAAAGTTGAAGAATATGAGAGGCTaGCCTTATCCCAATGACTCCTCTCCTTTAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: GTRGEKLKNMRG*PYPNDSSPLDH Trigger: ATGATCTAAAGGAGAGGAGTCATTGGGATAAGGCCAGCCTCTCATATTCTTCAACTTTTCTCCTCTGGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487744.1 |
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