Pregenerated sensors for CPOX (Homo sapiens)
Ensembl gene IDs: ENSG00000080819Ensembl transcript IDs: ENST00000510489.1, ENST00000513674.1, ENST00000515041.1, ENST00000647941.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGCAGAGTGGAGAAGACTAAGGCACGGGTAACTGCCACACAGTaGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: GCRVEKTKARVTATQ*QSADQWHGEHTSCA Trigger: GGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAGTTACCCGTGCCTTAGTCTTCTCCACTCTGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR TCA 90 bp | TTTAATCAATTGACTCTGACAATCTGCCATCTCACCATTCATCACTaGCAGCATCCAAAACATGTTATCATCTGCCCACGAGGTAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: FNQLTLTICHLTIHH*QHPKHVIICPRGRV Trigger: CACCCTACCTCGTGGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTGTCAGAGTCAATTGATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCTGCCGACCAGTGGCATaGGGAGCACACATCGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LPSHHSSLTASKTCYHLPCRPVA*GAHIVC Trigger: GCACACGATGTGTGCTCCCCATGCCACTGGTCGGCA...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCGGAGCACACATCGTGTaGCCTCCAAACCCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: LPSHHSSLTASKTCYHLPGAHIV*PPNPCT Trigger: TGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCC...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATACACACAGTGGCAAAGTaGCGACCAGTGGCATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIHTVAK*RPVAWG Trigger: TCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTG...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCGCCCACGAGGTAGGGTaGAGAGTGGAGAAGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: TESQTFNVFHDNDMYEMLAHEVG*RVEKTK Trigger: CTTAGTCTTCTCCACTCTGCACCCTACCTCGTGGGC...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATACAAAGTGCCGACCAGTaGCATGGGGAGCACACATCG | + |
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Preference number: 2 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIQSADQ*HGEHTS Trigger: CGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR TCA 90 bp | AACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAGGTTGAACCAAGCTaGATGGCATCAGCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NCFMCSQVHELSIPVTNFKVEPS*MASASS Trigger: AGAAGAAGCTGATGCCATTCAGCTTGGTTCAACCTT...AAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| 3UTR-3UTR GCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCAAACATGTTATCATCTaGCCACGAGGTAGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TESQTFNVFHDNDMYEMLKHVII*PRGRVQ Trigger: CTGCACCCTACCTCGTGGGCAGATGATAACATGTTT...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTGAACCAAGCTGAATaGCATCAGCTTCTTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: ITVSCAHRSMSCQYQLPTLNQAE*HQLLLL Trigger: AAGTAGAAGAAGCTGATGCCATTCAGCTTGGTTCAA...AGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| 3UTR-3UTR GCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATACTGAATTGTAACACATaGAGAGATTATTTCAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QTFNVFHDNDMYEMLFLILNCNT*RDYFKC Trigger: GCACTTGAAATAATCTCTGCATGTGTTACAATTCAG...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR GCA 72 bp | AAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTaGCCTCCAAACCCCTGCACAGCCATTCTGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: KCRPVAWGAHIV*PPNPCTAILPA Trigger: TGCAGGCAGAATGGCTGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR CCA 72 bp | AACTGCCACACAGTGGCAAAGTGCCGACCAGTGGCATaGGGAGCACACATCGTGTGCCCTCCAAACCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: NCHTVAKCRPVA*GAHIVCPPNPC Trigger: GCAGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR CCA 72 bp | CGGGTAACTGCCACACAGTGGCAAAGTGCCGACCAGTaGCATGGGGAGCACACATCGTGTGCCCTCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: RVTATQWQSADQ*HGEHTSCALQT Trigger: GGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAGTTACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR CCA 72 bp | GTGGAGAAGACTAAGGCACGGGTAACTGCCACACAGTaGCAAAGTGCCGACCAGTGGCATGGGGAGCACACA | + |
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Preference number: 3 (lower is better) Translates to: VEKTKARVTATQ*QSADQWHGEHT Trigger: TGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAGTTACCCGTGCCTTAGTCTTCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR TCA 72 bp | TTGACTCTGACAATCTGCCATCTCACCATTCATCACTaGCAGCATCCAAAACATGTTATCATCTGCCCACGA | + |
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Preference number: 3 (lower is better) Translates to: LTLTICHLTIHH*QHPKHVIICPR Trigger: TCGTGGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTGTCAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAAATAGAACCCTTATCTCAATACTaGGAAACTCAATGTCCTATT | + |
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Preference number: 3 (lower is better) Translates to: IPRIILSLNFHTEMSEIEPLSQY*ETQCPI Trigger: AATAGGACATTGAGTTTCCAAGTATTGAGATAAGGG...TTCTATTTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCCCGGCTGCGCTGCGCTaGGACCAGGCTCGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AKCRPVAWGAHIVCPPNPPAALR*DQARSP Trigger: AGGGCTCCGAGCCTGGTCCCAGCGCAGCGCAGCCGG...GGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTTCACAGGCGGGGCCATaGAGCTGCTGCAGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QSADQWHGEHTSCALQTPSQAGP*SCCSGG Trigger: CCCACCGCTGCAGCAGCTTCATGGCCCCGCCTGTGA...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CTGCCACACAGTGGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGGCCCCCGTCTACCTGTaGCAGAGCCTGGCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: LPHSGKVPTSGMGSTHRVAPVYL*QSLAHL Trigger: CAGGTGTGCCAGGCTCTGGCACAGGTAGACGGGGGC...CACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCCAAAGTGCCGACCAGTaGCATGGGGAGCACACATCG | + |
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Preference number: 4 (lower is better) Translates to: AKCRPVAWGAHIVCPPNPQSADQ*HGEHTS Trigger: CGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG...GGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCCATACCGTCCTCTTCTaGGCTGCTGCCACAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AKCRPVAWGAHIVCPPNPHTVLF*AAATAS Trigger: AGAAGCTGTGGCAGCAGCTCAGAAGAGGACGGTATG...GGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CTGCCACACAGTGGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGGGAGCACACATCGTGTaGCCTCCAAACCCCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: LPHSGKVPTSGMGSTHRVGAHIV*PPNPCT Trigger: TGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCC...CACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CTGCCACACAGTGGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGTCAGCAGCTCCATCTTaGTCTTCATGTCGCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPHSGKVPTSGMGSTHRVSAAPS*SSCRPA Trigger: GGCCGGGCGACATGAAGACCAAGATGGAGCTGCTGA...CACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTGGTCCACAGAAAAGTTaGCGCCCCCGTCTACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QSADQWHGEHTSCALQTPGPQKS*RPRLPV Trigger: CACAGGTAGACGGGGGCGCCAACTTTTCTGTGGACC...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCAAAAGATACCACCAATaGCCCGCCGTTCTCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: AKCRPVAWGAHIVCPPNPKRYHQ*PAVLHD Trigger: ATCGTGGAGAACGGCGGGGCATTGGTGGTATCTTTT...GGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTAAGGAACTACAGCCCTaGCACAGCTCTGTACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QSADQWHGEHTSCALQTPKELQP*HSSVQS Trigger: GCTTTGTACAGAGCTGTGCCAGGGCTGTAGTTCCTT...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTAGATCTGGACCATGCTaGTCACAAGCCTCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QSADQWHGEHTSCALQTPRSGPC*SQASFR Trigger: TCTGAAGGAGGCTTGTGACCAGCATGGTCCAGATCT...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | CTGCCACACAGTGGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGTGGATAGTAGGAGCATaGGGATTCTTGGGGTGGATA | + |
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Preference number: 4 (lower is better) Translates to: LPHSGKVPTSGMGSTHRVWIVGA*GFLGWI Trigger: TATCCACCCCAAGAATCCTCATGCTCCTACTATCCA...CACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | AATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACCTCGACGTCGAGCCGTaGCCCAGCCCGCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NNCFMCSQVHELSIPVTNLDVEP*PSPRLC Trigger: GCAGAGCCGCGGGCTGGGGCACGGCTCGACGTCGAG...GTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | AATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTCCGCCCGCTGCACATaGCCGAAGGCGGCGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NNCFMCSQVHELSIPVTNSARCT*PKAAVA Trigger: GGCCACCGCCGCCTTCGGGCATGTGCAGCGGGCGGA...GTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CCA 90 bp | ACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAGCCTCCCCAGCGAAGTaGCCCGCGTCCCCGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TVSCAHRSMSCQYQLPTLASPAK*PASPRS Trigger: AGACCTCGGGGACGCGGGCCACTTCGCTGGGGAGGC...TAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | ACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTATCACAGGCGGGGCCATaGAGCTGCTGCAGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TVSCAHRSMSCQYQLPTLSQAGP*SCCSGG Trigger: CCCACCGCTGCAGCAGCTTCATGGCCCCGCCTGTGA...TAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CCA 90 bp | GCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCGCCCATAGCACAAAATaGCAATTTACCATCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: AKCRPVAWGAHIVCPPNPAHSTK*QFTIFS Trigger: ACTAAAGATGGTAAATTGCCATTTTGTGCTATGGGC...GGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAATCCGCCCGCTGCACATaGCCGAAGGCGGCGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKSARCT*PKAAVA Trigger: GGCCACCGCCGCCTTCGGGCATGTGCAGCGGGCGGA...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTAACATCTCCGCCCGCTaGACATGCCCGAAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSNISAR*TCPKAA Trigger: CGCCGCCTTCGGGCATGTGCAGCGGGCGGAGATGTT...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCCCTGCACAGCCATTCTaGCTGCATCAACGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPPAQPF*LHQRTQ Trigger: CTGGGTGCGTTGATGCAGGCAGAATGGCTGTGCAGG...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCCACACAGTGGCAAAGTaGCGACCAGTGGCATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPHTVAK*RPVAWG Trigger: TCCCCATGCCACTGGTCGGCACTTTGCCACTGTGTG...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTCTACTTCAAAGTATCATCTTTAGTCTTCAGAACTTTTCCTCTGCTTCCGGCTGCGCTGCGCTaGGACCAGGCTCGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SFFYFKVSSLVFRTFPLLPAALR*DQARSP Trigger: AGGGCTCCGAGCCTGGTCCCAGCGCAGCGCAGCCGG...AAGCAGAGGAAAAGTTCTGAAGACTAAAGATGATACTTTGAAGTAGAAGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CCA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTGAATTTCAGCTTCTTTaGAATTCTCTGAGGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: QSADQWHGEHTSCALQTPEFQLL*NSLRVN Trigger: ATTCACCCTCAGAGAATTCCAAAGAAGCTGAAATTC...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | TTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAGACCCCCGGAGTATTaGGCCGGCGAGCTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: FMCSQVHELSIPVTNFKHRPPEY*AGELHR Trigger: CCTGTGCAGCTCGCCGGCTCAATACTCCGGGGGTCT...ATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTCTCAGCCTGCCCAGCTaGAAGGCCATGTTCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSLSLPS*KAMFPH Trigger: GTGCGGGAACATGGCCTTGCAGCTGGGCAGGCTGAG...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | TTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAACATCTCCGCCCGCTaGACATGCCCGAAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: FMCSQVHELSIPVTNFKHNISAR*TCPKAA Trigger: CGCCGCCTTCGGGCATGTGCAGCGGGCGGAGATGTT...ATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | TTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATCTCAGCCTGCCCAGCTaGAAGGCCATGTTCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: FMCSQVHELSIPVTNFKHLSLPS*KAMFPH Trigger: GTGCGGGAACATGGCCTTGCAGCTGGGCAGGCTGAG...ATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CCA 90 bp | ACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTATCCCGCACTATCACCTaGAGCAGTGCCTGCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TVSCAHRSMSCQYQLPTLSRTIT*SSACVP Trigger: TGGGACGCAGGCACTGCTCCAGGTGATAGTGCGGGA...TAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAAAGACCCCCGGAGTATTaGGCCGGCGAGCTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKRPPEY*AGELHR Trigger: CCTGTGCAGCTCGCCGGCTCAATACTCCGGGGGTCT...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | AGAATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCATTGCAGCTTCCTCTGTaGCAGAGCCTGGCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RITVSCAHRSMSCQYQLPLQLPL*QSLAHL Trigger: CAGGTGTGCCAGGCTCTGGCACAGAGGAAGCTGCAA...TGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTCACAGCCATTCTGCCTaGATCAACGCACCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSHSHSA*INAPSP Trigger: GGGACTGGGTGCGTTGATGCAGGCAGAATGGCTGTG...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | ATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTCAGCAGCTCCATCTTaGTCTTCATGTCGCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITVSCAHRSMSCQYQLPTSAAPS*SSCRPA Trigger: GGCCGGGCGACATGAAGACCAAGATGGAGCTGCTGA...AGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCTCAAGTATGTTGGAGTaGGGTCACATCCACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPSSMLE*GHIHHQ Trigger: TTGGTGGTGGATGTGACCTCACTCCAACATACTTGA...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | ATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAAATATCACCTGGAGCAGTaGCTGCGTCCCAGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCSQVHELSIPVTNFKHKYHLEQ*LRPRAL Trigger: CAGGGCTCTGGGACGCAGGCACTGCTCCAGGTGATA...TTTATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | ATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAAATAGAATATCACCTGGAGCAGTaGCTGCGTCCCAGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPRIILSLNFHTEMSEIEYHLEQ*LRPRAL Trigger: CAGGGCTCTGGGACGCAGGCACTGCTCCAGGTGATA...TTCTATTTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTCCCGCACTATCACCTaGAGCAGTGCCTGCGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TESQTFNVFHDNDMYEMLSRTIT*SSACVP Trigger: TGGGACGCAGGCACTGCTCCAGGTGATAGTGCGGGA...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCGAAACACCTCCTCCTTaGACGGAGAGTCAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPETPPP*TESQDH Trigger: ATGATCTTGACTCTCCGTCCAAGGAGGAGGTGTTTC...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | TTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATATTGAGCCGGCGAGCTaGACAGGCGGAAAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FMCSQVHELSIPVTNFKHIEPAS*TGGKNL Trigger: AAGGTTCTTTCCGCCTGTGCAGCTCGCCGGCTCAAT...ATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCCGTCCTCTTCTGAGCTaGTGCCACAGCTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TESQTFNVFHDNDMYEMLRPLLS*CHSFSW Trigger: CCAGGAGAAGCTGTGGCAGCAGCTCAGAAGAGGACG...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | ATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAAATAGAATGCCCTCCAAACCCCTaGACAGCCATTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPRIILSLNFHTEMSEIECPPNP*TAILPA Trigger: TGCAGGCAGAATGGCTGTGCAGGGGTTTGGAGGGCA...TTCTATTTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTTGCCACAGCTTCTCCTaGGGGGTGAATGAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSCHSFS*GVNESS Trigger: TGATGACTCATTCACCCCCCAGGAGAAGCTGTGGCA...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAATGCCGACCAGTGGCATaGGGAGCACACATCGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKCRPVA*GAHIVC Trigger: GCACACGATGTGTGCTCCCCATGCCACTGGTCGGCA...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCCTCACCATTCATCACTaGCAGCATCCAAAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPLTIHH*QHPKHV Trigger: AACATGTTTTGGATGCTGTCAGTGATGAATGGTGAG...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTGCCCTTGATTCAAGTATGTTaGAGTGAGGTCACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHSSLTASKTCYHLPLIQVC*SEVTST Trigger: GGTGGATGTGACCTCACTCCAACATACTTGAATCAA...GGGCAGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCGTAACTGCCACACAGTaGCAAAGTGCCGACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TESQTFNVFHDNDMYEMLVTATQ*QSADQW Trigger: CCACTGGTCGGCACTTTGCCACTGTGTGGCAGTTAC...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATACTTGAAGTACACAGCTaGTGCCGCCACCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTFNVFHDNDMYEMLFLILEVHS*CRHLLP Trigger: AGGAAGGAGGTGGCGGCATCAGCTGTGTACTTCAAG...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | AACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTGTGCTCACAGGTCCATaGGTTGTCAATACCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NCFMCSQVHELSIPVTNFVLTGP*VVNTSY Trigger: GTAACTGGTATTGACAACTCATGGACCTGTGAGCAC...AAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTTCCTTCAGAGTTCTGTaGAAATGGACAGCGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSSFRVL*KWTASS Trigger: AGAAGACGCTGTCCATTTTCACAGAACTCTGAAGGA...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CATGACATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAACATGAACAACAGAAATaGTCACCCCAGCCTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HDIPRIILSLNFHTEMSEHEQQK*SPQPFR Trigger: TCGAAAAGGCTGGGGTGAGCATTTCTGTTGTTCATG...TTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGATGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCCCACCAAACCACCACTaGTTGTTGCCATCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TESQTFNVFHDNDMYEMLPPNHH*LLPSAS Trigger: AGAAGCTGATGGCAACAAGCAGTGGTGGTTTGGTGG...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | TTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAAGGTTGAACCAAGCTaGATGGCATCAGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FMCSQVHELSIPVTNFKHKVEPS*MASASS Trigger: AGAAGAAGCTGATGCCATTCAGCTTGGTTCAACCTT...ATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATATTCTGGATCCTGGAGTaGAGAGGCCAAACTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIFWILE*RGQTLC Trigger: GCACAAAGTTTGGCCTCTTCACTCCAGGATCCAGAA...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | ATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAAATAGAAAGAGGCCAAACTTTGTaGCCCGATCATACAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPRIILSLNFHTEMSEIERGQTL*PDHTAD Trigger: ATCTGCTGTATGATCGGGGCACAAAGTTTGGCCTCT...TTCTATTTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATATTCTCTGAGGGTGAATaGATGTACTCCCATCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIFSEGE*MYSHRA Trigger: TGCCCGATGGGAGTACATGCATTCACCCTCAGAGAA...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATATTTGGGGTAGAGATCTaGACCATGCTGGTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIFGVEI*TMLVTS Trigger: GCTTGTGACCAGCATGGTCCAGATCTCTACCCCAAA...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR TCA 90 bp | CATGACATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAATTTTGCAGCTTCCTCTaGAAGATTTCCATGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: HDIPRIILSLNFHTEMSEFCSFL*KISMNN Trigger: GTTGTTCATGGAAATCTTTCAGAGGAAGCTGCAAAA...TTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGATGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | AATAACTGTTTCATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACAATAACTGTTTCATGTaGTCACAGGTCCATGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNCFMCSQVHELSIPVTNNNCFM*SQVHEL Trigger: CAACTCATGGACCTGTGAGCACATGAAACAGTTATT...GTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR GCA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCACCACCACTGCTTGTTaGCATCAGCTTCTTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TESQTFNVFHDNDMYEMLTTTAC*HQLLLL Trigger: AAGTAGAAGAAGCTGATGGCAACAAGCAGTGGTGGT...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAAAAACATGTTATCATCTaGCCACGAGGTAGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKKHVII*PRGRVQ Trigger: CTGCACCCTACCTCGTGGGCAGATGATAACATGTTT...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATAACCCAGTCCCTTGGATaGCGTAGAACTTCCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QTFNVFHDNDMYEMLFLITQSLG*RRTSRI Trigger: AATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGT...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR GCA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTCTGAATTGTAACACATaGAGAGATTATTTCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSAISPFITDSIQNMLSSLNCNT*RDYFKC Trigger: GCACTTGAAATAATCTCTGCATGTGTTACAATTCAG...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CCA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAATTCAATTCTGGATCCTaGAGTGAAGAGGCCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKFNSGS*SEEAKL Trigger: AAGTTTGGCCTCTTCACTCCAGGATCCAGAATTGAA...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| 3UTR CAA 72 bp | GAGAATAACTGTTTCATGTGCTCACAGGTCCATGAGTaGTCAATACCAGTTACCAACTTTAAACATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENNCFMCSQVHE*SIPVTNFKHKR Trigger: CCTTTTATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACATGAAACAGTTATTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR TCA 90 bp | AGCTTCTTCTACTTCAAAGTATCATCTTTAGTCTTCAGAACTTTTCCTCTGCTTTTAAACATAAAAGGTTaGACCAAGCTGAATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFFYFKVSSLVFRTFPLLLNIKG*TKLNGI Trigger: GATGCCATTCAGCTTGGTTCAACCTTTTATGTTTAA...AAGCAGAGGAAAAGTTCTGAAGACTAAAGATGATACTTTGAAGTAGAAGAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS GCA 90 bp | CTGCTCCGTGCCAGCCGGGCCAGGGGGCCGGCAGACGCGTCCGGCTaGGCTGCGCTGGGACCAGGCTCGGAGCCCTCCGCCGCCGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRASRARGPADASG*AALGPGSEPSAAAL Trigger: CAGTGCGGCGGCGGAGGGCTCCGAGCCTGGTCCCAGCGCAGCGCAGCCGGACGCGTCTGCCGGCCCCCTGGCCCGGCTGGCACGGAGCAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 90 bp | CGCAGCCGCCCCGCGCCACGAGCCAGCAGGGGCCCGAGCTCAGCCTaGCCAGCTGCAAGGCCATGTTCCCGCACTATCACCTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRPAPRASRGPSSA*PAARPCSRTITWSS Trigger: ACTGCTCCAGGTGATAGTGCGGGAACATGGCCTTGCAGCTGGGCAGGCTGAGCTCGGGCCCCTGCTGGCTCGTGGCGCGGGGCGGCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 90 bp | CCCCGCGCCACGAGCCAGCAGGGGCCCGAGCTCAGCCTGCCCAGCTaGAAGGCCATGTTCCCGCACTATCACCTGGAGCAGTGCCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRATSQQGPELSLPS*KAMFPHYHLEQCLR Trigger: ACGCAGGCACTGCTCCAGGTGATAGTGCGGGAACATGGCCTTGCAGCTGGGCAGGCTGAGCTCGGGCCCCTGCTGGCTCGTGGCGCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS CCA 90 bp | TGCCGCCACCTCCTTCCTTCCTCTCCCACCGGTCCACAGAAAAGTTaGCGCCCCCGTCTACCTGTGCCAGAGCCTGGCACACCTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRHLLPSSPTGPQKS*RPRLPVPEPGTPGP Trigger: AGGCCCAGGTGTGCCAGGCTCTGGCACAGGTAGACGGGGGCGCCAACTTTTCTGTGGACCGGTGGGAGAGGAAGGAAGGAGGTGGCGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000515041.1 ENST00000647941.2 |
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| CDS CCA 90 bp | TTGGCGCCCCCGTCTACCTGTGCCAGAGCCTGGCACACCTGGGCCTaGGTCTCCAGAATCAGCAGCTCCATCTTGGTCTTCATGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LAPPSTCARAWHTWA*VSRISSSILVFMSP Trigger: GGGCGACATGAAGACCAAGATGGAGCTGCTGATTCTGGAGACCCAGGCCCAGGTGTGCCAGGCTCTGGCACAGGTAGACGGGGGCGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 90 bp | CGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTaGACAGCCATTCTGCCTGCATCAACGCACCCAGTCCCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPVAWGAHIVCPPNP*TAILPASTHPVPWM Trigger: CATCCAAGGGACTGGGTGCGTTGATGCAGGCAGAATGGCTGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS GCA 90 bp | ACAGTGGCAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTaGCCTCCAAACCCCTGCACAGCCATTCTGCCTGCATCAACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVAKCRPVAWGAHIV*PPNPCTAILPASTH Trigger: GTGCGTTGATGCAGGCAGAATGGCTGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTGCCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTGAAAACACACCCATCTaGAAGTACACAGCTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSADQWHGEHTSCALQTPENTPI*KYTADA Trigger: GGCATCAGCTGTGTACTTCAAGATGGGTGTGTTTTC...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000647941.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTATGGACAGCGTCTTCTaGATTCAAGTATGTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSADQWHGEHTSCALQTPMDSVF*IQVCWS Trigger: ACTCCAACATACTTGAATCAAGAAGACGCTGTCCAT...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTGCCGACCAGTGGCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTGAATCCTGTTGTGATTaGCTCTTAAGAGCAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSADQWHGEHTSCALQTPESCCD*LLRAKS Trigger: GCTCTTTGCTCTTAAGAGCAAATCACAACAGGATTC...AGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGCCACTGGTCGGCACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 90 bp | CCTGCACAGCCATTCTGCCTGCATCAACGCACCCAGTCCCTTGGATaGCGTAGAACTTCCAGAATTTCAGCTTCTTTGGAATTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAQPFCLHQRTQSLG*RRTSRISASLEFSE Trigger: CTCAGAGAATTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTTGATGCAGGCAGAATGGCTGTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 90 bp | CCCAGTCCCTTGGATGGCGTAGAACTTCCAGAATTTCAGCTTCTTTaGAATTCTCTGAGGGTGAATGCATGTACTCCCATCGGGCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PSPLDGVELPEFQLL*NSLRVNACTPIGQL Trigger: TAACTGCCCGATGGGAGTACATGCATTCACCCTCAGAGAATTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCCAGACCCCCGGAGTATaGAGCCGGCGAGCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: TESQTFNVFHDNDMYEMLQTPGV*SRRAAQ Trigger: CTGTGCAGCTCGCCGGCTCAATACTCCGGGGGTCTG...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 90 bp | CAGAGTTCTGTGAAAATGGACAGCGTCTTCTTGATTCAAGTATGTTaGAGTGAGGTCACATCCACCACCAAACCACCACTGCTTGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: QSSVKMDSVFLIQVC*SEVTSTTKPPLLVA Trigger: GGCAACAAGCAGTGGTGGTTTGGTGGTGGATGTGACCTCACTCCAACATACTTGAATCAAGAAGACGCTGTCCATTTTCACAGAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | AGCTTCTTCTACTTCAAAGTATCATCTTTAGTCTTCAGAACTTTTCCTCTGCTTCAGACCCCCGGAGTATaGAGCCGGCGAGCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: SFFYFKVSSLVFRTFPLLQTPGV*SRRAAQ Trigger: CTGTGCAGCTCGCCGGCTCAATACTCCGGGGGTCTG...AAGCAGAGGAAAAGTTCTGAAGACTAAAGATGATACTTTGAAGTAGAAGAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS TCA 90 bp | TTCTGTGAAAATGGACAGCGTCTTCTTGATTCAAGTATGTTGGAGTaGGGTCACATCCACCACCAAACCACCACTGCTTGTTGCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: FCENGQRLLDSSMLE*GHIHHQTTTACCHQ Trigger: CTGATGGCAACAAGCAGTGGTGGTTTGGTGGTGGATGTGACCTCACTCCAACATACTTGAATCAAGAAGACGCTGTCCATTTTCACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCCGGTCCACAGAAAAGTaGGCGCCCCCGTCTACCTGT | + |
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Preference number: 5 (lower is better) Translates to: TESQTFNVFHDNDMYEMLRSTEK*APPSTC Trigger: ACAGGTAGACGGGGGCGCCAACTTTTCTGTGGACCG...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTAACGCACCCAGTCCCTaGGATGGCGTAGAACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: QSAISPFITDSIQNMLSSNAPSP*DGVELP Trigger: TGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTT...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | ATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAAAATCAGCAGCTCCATCTaGGTCTTCATGTCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: MCSQVHELSIPVTNFKHKISSSI*VFMSPG Trigger: GCCGGGCGACATGAAGACCAAGATGGAGCTGCTGAT...TTTATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CAA 90 bp | CAATCTGCCATCTCACCATTCATCACTGACAGCATCCAAAACATGTTATCATCTCGAAACACCTCCTCCTaGGACGGAGAGTCAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: QSAISPFITDSIQNMLSSRNTSS*DGESRS Trigger: TGATCTTGACTCTCCGTCCAAGGAGGAGGTGTTTCG...AGATGATAACATGTTTTGGATGCTGTCAGTGATGAATGGTGAGATGGCAGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | CAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCTTCCTTATAATCAGCAGCTCCATCTaGGTCTTCATGTCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QTFNVFHDNDMYEMLFLIISSSI*VFMSPG Trigger: GCCGGGCGACATGAAGACCAAGATGGAGCTGCTGAT...TATAAGGAAGAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 90 bp | TGTGAGCCTTTCAGGTTACAGCACTATCCTCAACTAATGTCAGGATaGTGTCCTTACTTGCTGTCCAACTATGAAAATGAAATGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: CEPFRLQHYPQLMSG*CPYLLSNYENEMRT Trigger: AGTCCTCATTTCATTTTCATAGTTGGACAGCAAGTAAGGACACCATCCTGACATTAGTTGAGGATAGTGCTGTAACCTGAAAGGCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510489.1 |
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| CDS-3UTR CAA 90 bp | ACAGAATCACAAACATTCAACGTGTTCCACGATAATGATATGTATGAGATGCTCCCAAACCACCACTGCTaGTTGCCATCAGCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TESQTFNVFHDNDMYEMLPNHHC*LPSASS Trigger: AGAAGAAGCTGATGGCAACAAGCAGTGGTGGTTTGG...GAGCATCTCATACATATCATTATCGTGGAACACGTTGAATGTTTGTGATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | ATGTGCTCACAGGTCCATGAGTTGTCAATACCAGTTACCAACTTTAAACATAAATCACAGGTCCATGAGTaGTCAATACCAGTTACCAAC | + |
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Preference number: 5 (lower is better) Translates to: MCSQVHELSIPVTNFKHKSQVHE*SIPVTN Trigger: GTTGGTAACTGGTATTGACAACTCATGGACCTGTGA...TTTATGTTTAAAGTTGGTAACTGGTATTGACAACTCATGGACCTGTGAGCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS-3UTR CAA 90 bp | CATGACATCCCTAGGATTATTCTTAGTCTCAACTTCCACACAGAGATGTCTGAAATGAGGTTTAATCAATaGACTCTGACAATCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: HDIPRIILSLNFHTEMSEMRFNQ*TLTICH Trigger: ATGGCAGATTGTCAGAGTCAATTGATTAAACCTCAT...TTCAGACATCTCTGTGTGGAAGTTGAGACTAAGAATAATCCTAGGGATGTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS-3UTR CAA 90 bp | GTTCTCTGGAGAAAGATATATAAGGATTACAGCAGAGACTTCAGTATTGACAAACCCTTATCTCAATACTaGGAAACTCAATGTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: VLWRKIYKDYSRDFSIDKPLSQY*ETQCPI Trigger: AATAGGACATTGAGTTTCCAAGTATTGAGATAAGGG...TTTGTCAATACTGAAGTCTCTGCTGTAATCCTTATATATCTTTCTCCAGAGAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS GCA 72 bp | CCTCTCGACGTCGAGCCGTGCCCCAGCCCGCGGCTCTaGTCCGTGCCAGCCGGGCCAGGGGGCCGGCAGACG | + |
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Preference number: 6 (lower is better) Translates to: PLDVEPCPSPRL*SVPAGPGGRQT Trigger: CGTCTGCCGGCCCCCTGGCCCGGCTGGCACGGAGCAGAGCCGCGGGCTGGGGCACGGCTCGACGTCGAGAGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 72 bp | GTCCCCACCCAGGGGCCGCCTCTCGACGTCGAGCCGTaGCCCAGCCCGCGGCTCTGCTCCGTGCCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VPTQGPPLDVEP*PSPRLCSVPAG Trigger: CCCGGCTGGCACGGAGCAGAGCCGCGGGCTGGGGCACGGCTCGACGTCGAGAGGCGGCCCCTGGGTGGGGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 72 bp | CGCGTCCCCGAGGTCTTAGGCAACATCTCCGCCCGCTaGACATGCCCGAAGGCGGCGGTGGCCAGCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RVPEVLGNISAR*TCPKAAVASPT Trigger: GGTGGGGCTGGCCACCGCCGCCTTCGGGCATGTGCAGCGGGCGGAGATGTTGCCTAAGACCTCGGGGACGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 72 bp | CCCGAGGTCTTAGGCAACATCTCCGCCCGCTGCACATaGCCGAAGGCGGCGGTGGCCAGCCCCACCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: PEVLGNISARCT*PKAAVASPTNP Trigger: GGGGTTGGTGGGGCTGGCCACCGCCGCCTTCGGGCATGTGCAGCGGGCGGAGATGTTGCCTAAGACCTCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000513674.1 ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 72 bp | CCCCACCCAGACCCCCGGAGTATTGAGCCGGCGAGCTaGACAGGCGGAAAGAACCTTTCGAGAAGAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PHPDPRSIEPAS*TGGKNLSRRAA Trigger: AGCGGCTCTTCTCGAAAGGTTCTTTCCGCCTGTGCAGCTCGCCGGCTCAATACTCCGGGGGTCTGGGTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513674.1 |
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| CDS CCA 72 bp | CTCCTTCCTTCCTCTCCCACCGGTCCACAGAAAAGTTaGCGCCCCCGTCTACCTGTGCCAGAGCCTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LLPSSPTGPQKS*RPRLPVPEPGT Trigger: TGTGCCAGGCTCTGGCACAGGTAGACGGGGGCGCCAACTTTTCTGTGGACCGGTGGGAGAGGAAGGAAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000515041.1 ENST00000647941.2 |
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| CDS GCA 72 bp | GCATGGGGAGCACACATCGTGTGCCCTCCAAACCCCTaGACAGCCATTCTGCCTGCATCAACGCACCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: AWGAHIVCPPNP*TAILPASTHPV Trigger: GACTGGGTGCGTTGATGCAGGCAGAATGGCTGTGCAGGGGTTTGGAGGGCACACGATGTGTGCTCCCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CAA 72 bp | CACAGCCATTCTGCCTGCATCAACGCACCCAGTCCCTaGGATGGCGTAGAACTTCCAGAATTTCAGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HSHSACINAPSP*DGVELPEFQLL Trigger: AAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTTGATGCAGGCAGAATGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CAA 90 bp | AAACCCCTGCACAGCCATTCTGCCTGCATCAACGCACCCAGTCCCTaGGATGGCGTAGAACTTCCAGAATTTCAGCTTCTTTGGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: KPLHSHSACINAPSP*DGVELPEFQLLWNS Trigger: AGAATTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTTGATGCAGGCAGAATGGCTGTGCAGGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 72 bp | CCATTCTGCCTGCATCAACGCACCCAGTCCCTTGGATaGCGTAGAACTTCCAGAATTTCAGCTTCTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PFCLHQRTQSLG*RRTSRISASLE Trigger: TTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTTGATGCAGGCAGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CAA 90 bp | ACCCAGTCCCTTGGATGGCGTAGAACTTCCAGAATTTCAGCTTCTTaGGAATTCTCTGAGGGTGAATGCATGTACTCCCATCGGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TQSLGWRRTSRISAS*EFSEGECMYSHRAV Trigger: AACTGCCCGATGGGAGTACATGCATTCACCCTCAGAGAATTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 72 bp | TTTTCACAAGGGGAATGTAAGAAGGAACTACAGCCCTaGCACAGCTCTGTACAAAGCGAAACACCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FSQGECKKELQP*HSSVQSETPPP Trigger: AGGAGGAGGTGTTTCGCTTTGTACAGAGCTGTGCCAGGGCTGTAGTTCCTTCTTACATTCCCCTTGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000510489.1 ENST00000647941.2 |
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| CDS TCA 72 bp | AATGGACAGCGTCTTCTTGATTCAAGTATGTTGGAGTaGGGTCACATCCACCACCAAACCACCACTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NGQRLLDSSMLE*GHIHHQTTTAC Trigger: ACAAGCAGTGGTGGTTTGGTGGTGGATGTGACCTCACTCCAACATACTTGAATCAAGAAGACGCTGTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 72 bp | GTGAAAATGGACAGCGTCTTCTTGATTCAAGTATGTTaGAGTGAGGTCACATCCACCACCAAACCACCACTG | + |
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Preference number: 6 (lower is better) Translates to: VKMDSVFLIQVC*SEVTSTTKPPL Trigger: CAGTGGTGGTTTGGTGGTGGATGTGACCTCACTCCAACATACTTGAATCAAGAAGACGCTGTCCATTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS GCA 72 bp | AGAATTTCAGCTTCTTTGGAATTCTCTGAGGGTGAATaGATGTACTCCCATCGGGCAGTTAGAGGTAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RISASLEFSEGE*MYSHRAVRGKD Trigger: GTCTTTACCTCTAACTGCCCGATGGGAGTACATGCATTCACCCTCAGAGAATTCCAAAGAAGCTGAAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 72 bp | TTGGATGGCGTAGAACTTCCAGAATTTCAGCTTCTTTaGAATTCTCTGAGGGTGAATGCATGTACTCCCATC | + |
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Preference number: 6 (lower is better) Translates to: LDGVELPEFQLL*NSLRVNACTPI Trigger: GATGGGAGTACATGCATTCACCCTCAGAGAATTCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647941.2 |
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| CDS CCA 72 bp | TTCAGGTTACAGCACTATCCTCAACTAATGTCAGGATaGTGTCCTTACTTGCTGTCCAACTATGAAAATGAA | + |
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Preference number: 6 (lower is better) Translates to: FRLQHYPQLMSG*CPYLLSNYENE Trigger: TTCATTTTCATAGTTGGACAGCAAGTAAGGACACCATCCTGACATTAGTTGAGGATAGTGCTGTAACCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510489.1 |
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