RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL7A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114270

Ensembl transcript IDs: ENST00000328333.12, ENST00000422991.1, ENST00000459756.5, ENST00000462475.1, ENST00000465238.5, ENST00000466591.1, ENST00000467985.1, ENST00000470076.1, ENST00000474432.1, ENST00000487017.5, ENST00000681320.1

Found 873 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTGGCAGGAGCCACAATaGGGGTTTGTCCACAGGGGG +
Preference number: 2 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTWQEPQ*GFVHRG
Trigger: CCCCCTGTGGACAAACCCCCATTGTGGCTCCTGCCA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
3UTR-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACGGGACCAAGTCACTaGAATAACGGACGTGCACAC +
Preference number: 2 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATGPSH*NNGRAH
Trigger: GTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
3UTR-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACACGCACGCTCACGTaGACACAAGCCTCTAGCACC +
Preference number: 2 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLTRTLT*TQASST
Trigger: GGTGCTAGAGGCTTGTGTGCACGTGAGCGTGCGTGT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAGGACCGGCAGGCCCTaGCCGCCCCTGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCRTGRP*PPLLPS
Trigger: AGAGGGGAGCAGGGGCGGCCAGGGCCTGCCGGTCCT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCGCGCTGCACCACGTaGAGCGTCCCCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLPRCTT*SVPRAG
Trigger: GCCAGCCCTGGGGACGCTTCACGTGGTGCAGCGCGG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGCGCTGCACCACGTaGAGCGTCCCCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPRCTT*SVPRAG
Trigger: GCCAGCCCTGGGGACGCTTCACGTGGTGCAGCGCGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGCCAAGCGACGCAGCTaGTCTGGGTCCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAAKRRS*SGSAPA
Trigger: GGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCGGCGCGGCCAGGGCTaGCTGGACGCCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLRRGQG*LDAHLL
Trigger: GAGCAGATGGGCGTCCAGGCAGCCCTGGCCGCGCCG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACGGCGCGGCCAGGGCTaGCTGGACGCCCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSRRGQG*LDAHLL
Trigger: GAGCAGATGGGCGTCCAGGCAGCCCTGGCCGCGCCG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCCCCGAACTCCAGGTaGCCCCCGAAGGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCPPNSR*PPKATL
Trigger: GAGCGTGGCCTTCGGGGGGCACCTGGAGTTCGGGGG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCACACCCCCAGCCCTaGCTGGGAGCCCGGGAATAC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPHPQP*LGAREY
Trigger: GTATTCCCGGGCTCCCAGGCAGGGCTGGGGGTGTGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCCCGGGATCCCGCTaGGCCTGGGGGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPPGSR*AWGSTF
Trigger: GAACGTGGACCCCCAGGCCCAGCGGGATCCCGGGGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAGGACCGGCAGGCCCTaGCCGCCCCTGCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTRTGRP*PPLLPS
Trigger: AGAGGGGAGCAGGGGCGGCCAGGGCCTGCCGGTCCT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCTCCCGGCGGACAGTaGGGACACTGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCAPGGQ*GHWHCP
Trigger: AGGGCAGTGCCAGTGTCCTCACTGTCCGCCGGGAGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAGACCAGGTGGCCCCTaGGGGCCAGGGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTRPGGP*GPGSPR
Trigger: CCGTGGAGACCCTGGCCCTCAGGGGCCACCTGGTCT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCCGGGTTGCCGTCCTaGCCCCTCGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPGLPS*PLGPGS
Trigger: AGAGCCTGGACCGAGGGGTCAGGACGGCAACCCGGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCGGGTTGCCGTCCTaGCCCCTCGGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPGLPS*PLGPGS
Trigger: AGAGCCTGGACCGAGGGGTCAGGACGGCAACCCGGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCCAGGTGGTCCCACTaGCCCCGGTGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPRWSH*PRWSRW
Trigger: CCACCTGGACCACCGGGGTCAGTGGGACCACCTGGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACCCAGGTGGTCCCACTaGCCCCGGTGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTPRWSH*PRWSRW
Trigger: CCACCTGGACCACCGGGGTCAGTGGGACCACCTGGG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCAGGGCCCAGCTCCTaGTGCTGTGTGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCPGPSS*CCVGPP
Trigger: TGGTGGGCCCACACAGCAGCAGGAGCTGGGCCCTGG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGACACTCGCACCCGCTaGCCGGGCAGCTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTDTRTR*PGSSVA
Trigger: AGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCATCACCCCTGGTACGTaGTGGCGGCGCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAITPGT*WRRPGA
Trigger: TGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGAT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACGATCAGGCCCTCCTTaGCAGGGGCCCCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSRSGPP*QGPPTG
Trigger: GCCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCTCTGGGACCAACACTaGCAGGTGGCCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTALWDQH*QVALGD
Trigger: GTCCCCCAGGGCCACCTGGCAGTGTTGGTCCCAGAG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGGGGCAGTGTCTGGCTaGACTCCGGACCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAGAVSG*TPDHCL
Trigger: CAGGCAGTGGTCCGGAGTCCAGCCAGACACTGCCCC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAAGCGTCCCCAGGGCTaGCGGAGCCTCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTKRPQG*RSLRRR
Trigger: ACGCCGCCTGAGGCTCCGCCAGCCCTGGGGACGCTT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAAGCGTCCCCAGGGCTaGCGGAGCCTCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLKRPQG*RSLRRR
Trigger: ACGCCGCCTGAGGCTCCGCCAGCCCTGGGGACGCTT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGAAGCCCTGCGCTCTaGGCACCGGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGSPAL*APAPSA
Trigger: TGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGAAGCCCTGCGCTCTaGGCACCGGCTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGSPAL*APAPSA
Trigger: TGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCGGCCAGGGCTGCCTaGACGCCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTAARAA*TPICSR
Trigger: CCTGGAGCAGATGGGCGTCCAGGCAGCCCTGGCCGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGCGGCCAGGGCTGCCTaGACGCCCATCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIAARAA*TPICSR
Trigger: CCTGGAGCAGATGGGCGTCCAGGCAGCCCTGGCCGC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCCGGCTCCCCCTTTaGGCCTCGAGGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPRLPL*ASRSSL
Trigger: GAGCGAGGACCTCGAGGCCCAAAGGGGGAGCCGGGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCGGCTCCCCCTTTaGGCCTCGAGGTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPRLPL*ASRSSL
Trigger: GAGCGAGGACCTCGAGGCCCAAAGGGGGAGCCGGGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGGGCCAACGGGGCCTTaGGGTCCAGGGCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTGPTGP*GPGLPG
Trigger: TCCCGGAAGCCCTGGACCCCAAGGCCCCGTTGGCCC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCAGGAGGTCCCCGTaGGCCCTGCTCACCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCSRRSP*ALLTRR
Trigger: TCTCCGGGTGAGCAGGGCCCACGGGGACCTCCTGGA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAACGTCCAGCAACCCCTaGCAGCCCCCGGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSTSSNP*QPPGSR
Trigger: GCGGGATCCCGGGGGCTGCCAGGGGTTGCTGGACGT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACGTCCAGCAACCCCTaGCAGCCCCCGGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTSSNP*QPPGSR
Trigger: GCGGGATCCCGGGGGCTGCCAGGGGTTGCTGGACGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCCCACGGTCACCCTTaGGGCCCGTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPHGHP*GPCLLG
Trigger: TCCCAGGAGGCACGGGCCCCAAGGGTGACCGTGGGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCCCACGGTCACCCTTaGGGCCCGTGCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPHGHP*GPCLLG
Trigger: TCCCAGGAGGCACGGGCCCCAAGGGTGACCGTGGGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACGCCTGAGTCCCCCTTaGGGCCTCGACGCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSRLSPP*GLDAVR
Trigger: CCGAACGGCGTCGAGGCCCCAAGGGGGACTCAGGCG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACCTCGGGGTCCCTCCTaGCCGGGGCGGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTPRGPS*PGRPSS
Trigger: TGAAGATGGCCGCCCCGGCCAGGAGGGACCCCGAGG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCTCGGGGTCCCTCCTaGCCGGGGCGGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPRGPS*PGRPSS
Trigger: TGAAGATGGCCGCCCCGGCCAGGAGGGACCCCGAGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGCACCCCGTGGGCCTaGAGGCCCCAGGATCACAGC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGTPWA*RPQDHS
Trigger: GCTGTGATCCTGGGGCCTCCAGGCCCACGGGGTGCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGCACCCCGTGGGCCTaGAGGCCCCAGGATCACAGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGTPWA*RPQDHS
Trigger: GCTGTGATCCTGGGGCCTCCAGGCCCACGGGGTGCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCATGTGGGGCCCAGGATaGCCGGGCGCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRMWGPG*PGAGSA
Trigger: AGCAGACCCTGCGCCCGGTCATCCTGGGCCCCACAT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCTCCCGGCGGACAGTaGGGACACTGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLAPGGQ*GHWHCP
Trigger: AGGGCAGTGCCAGTGTCCTCACTGTCCGCCGGGAGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCTCTGGGCCGTGGGCTaGGTGCCAGGAAACCCTGTA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTALWAVG*VPGNPV
Trigger: TACAGGGTTTCCTGGCACTCAGCCCACGGCCCAGAG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGTCCTTCACCTCCGATaGCTTGTCCGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCVLHLR*LVREPP
Trigger: CGGGGGCTCCCGGACAAGTCATCGGAGGTGAAGGAC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCTCTCCAGGAGGCCCTaGGTCACCTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHILSRRP*VTWGSC
Trigger: GCAGGACCCCCAGGTGACTCAGGGCCTCCTGGAGAG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCTCCCCGGTCTCCTTTaGTGCCTGGCACACCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTALPGLL*CLAHPC
Trigger: ACAGGGGTGTGCCAGGCATCAAAGGAGACCGGGGAG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGGTCCAGGGTCTCCATaGCCACCCACTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTGPGSP*PPTGPG
Trigger: CCCTGGCCCAGTGGGTGGTCATGGAGACCCTGGACC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGTCCAGGGTCTCCATaGCCACCCACTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGPGSP*PPTGPG
Trigger: CCCTGGCCCAGTGGGTGGTCATGGAGACCCTGGACC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCAGTGGGAACCACGGTTaGAGGGGTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASGNHG*RGGHLV
Trigger: CACGAGGTGGCCACCCCTGCAACCGTGGTTCCCACT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAGCAGGTCCCACCACTaGAGGGTCCCCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSRSHH*RVPRAT
Trigger: GGTCGCCCTGGGGACCCTGCAGTGGTGGGACCTGCT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGCAGGTCCCACCACTaGAGGGTCCCCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLSRSHH*RVPRAT
Trigger: GGTCGCCCTGGGGACCCTGCAGTGGTGGGACCTGCT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCTGGTAGACCCGGGTTaGCGTCCTGACCCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCLVDPG*RPDPSV
Trigger: GACCGAGGGGTCAGGACGGCAACCCGGGTCTACCAG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCATCTTCACCCCGGATaGCTGGCTCCCCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCHLHPG*LAPHAR
Trigger: GCGAGCGTGGGGAGCCAGGCATCCGGGGTGAAGATG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTCTCTCCCTGTGCTaGGCTCGCACTCGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLTLSLC*ARTRGA
Trigger: GGCGCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACTCTCTCCCTGTGCTaGGCTCGCACTCGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTLSLC*ARTRGA
Trigger: GGCGCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCGCTCACTCGGCAGTaGCTGTCCCAGCCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPLTRQ*LSQPRQ
Trigger: CTGACGGGGCTGGGACAGCCACTGCCGAGTGAGCGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCGCTCACTCGGCAGTaGCTGTCCCAGCCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPLTRQ*LSQPRQ
Trigger: CTGACGGGGCTGGGACAGCCACTGCCGAGTGAGCGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGAGCCATCAGGGAAGTaGCGGGCCCCACACTGCGGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTEPSGK*RAPHCG
Trigger: GCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGAGCCATCAGGGAAGTaGCGGGCCCCACACTGCGGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRREPSGK*RAPHCG
Trigger: GCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCACGGTTGCAGGGGTaGCCACCTCGTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPRLQG*PPRGPP
Trigger: TGGAGGGCCACGAGGTGGCCACCCCTGCAACCGTGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGCAGCTCTGGTCCAGTaGGAACCACGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAAALVQ*EPRLQG
Trigger: CCCCTGCAACCGTGGTTCCCACTGGACCAGAGCTGC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGACCCAGGCACTTCCTaGCCAGGGCCTCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCDPGTS*PGPLSG
Trigger: GCCACTCAGAGGCCCTGGCCAGGAAGTGCCTGGGTC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAGCCCCTCTCGCCCTTaGCAGTGGCACTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCSPSRP*QWHFQG
Trigger: CCCCTGGAAGTGCCACTGCCAAGGGCGAGAGGGGCT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGGATCCCGCTGGGCCTaGGGGTCCACGTTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSGSRWA*GSTFAL
Trigger: AAGGGCGAACGTGGACCCCCAGGCCCAGCGGGATCC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCCCCGGGATCCCGCTaGGCCTGGGGGTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPPGSR*AWGSTF
Trigger: GAACGTGGACCCCCAGGCCCAGCGGGATCCCGGGGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCGGCCAGTGGGTCCTaGTGGCCCTTCAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCAASGS*WPFRTL
Trigger: AAGGGTCCTGAAGGGCCACCAGGACCCACTGGCCGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCATCCACAGACACCTTaGGGCCAGGGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRHPQTP*GQGVRG
Trigger: CCCCCGGACCCCCTGGCCCCAAGGTGTCTGTGGATG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCATCCACAGACACCTTaGGGCCAGGGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIHPQTP*GQGVRG
Trigger: CCCCCGGACCCCCTGGCCCCAAGGTGTCTGTGGATG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACCCGGGGCACCAGGTaGTCCAGGGTCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTRGTR*SRVSMT
Trigger: GGTCATGGAGACCCTGGACCACCTGGTGCCCCGGGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTTCACCCCGGATGCCTaGCTCCCCACGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTFTPDA*LPTLAS
Trigger: CGAGGCGAGCGTGGGGAGCCAGGCATCCGGGGTGAA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTTCACCCCGGATGCCTaGCTCCCCACGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLFTPDA*LPTLAS
Trigger: CGAGGCGAGCGTGGGGAGCCAGGCATCCGGGGTGAA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCACCCATGTCCCCCTTaGCACCCCGTGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTHPCPP*HPVGLE
Trigger: CTCCAGGCCCACGGGGTGCCAAGGGGGACATGGGTG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCACCCATGTCCCCCTTaGCACCCCGTGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRHPCPP*HPVGLE
Trigger: CTCCAGGCCCACGGGGTGCCAAGGGGGACATGGGTG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCAGCCTCGGTCACCCTTaGGACCGATCAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASLGHP*DRSGPP
Trigger: AGGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCCCTGGTCACCCTTaGGGCCTGGCTGCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLRPGHP*GLAARQ
Trigger: TTGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGGCACAGCATGGAGCTaGGAGCCGGCAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAGTAWS*EPAVSA
Trigger: TGCAGACACTGCCGGCTCCCAGCTCCATGCTGTGCC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCACAGCAAATAGCTTaGCCCCCTGCCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPQQIA*PPAPSA
Trigger: GGCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGTGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTGTGGGCCCACCACTaGGGACCCGCCATGTCACAC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRVWAHH*GPAMSH
Trigger: GTGTGACATGGCGGGTCCTCAGTGGTGGGCCCACAC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGTGTGGGCCCACCACTaGGGACCCGCCATGTCACAC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSVWAHH*GPAMSH
Trigger: GTGTGACATGGCGGGTCCTCAGTGGTGGGCCCACAC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCGTTCGAGCCACGATaGCTGCAGCAGGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLPFEPR*LQQGPP
Trigger: AGGAGGGCCCTGCTGCAGTCATCGTGGCTCGAACGG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGACAGCAGGCCAACCTaGACTGCCTGTGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTADSRPT*TACGPR
Trigger: TCTTGGGCCACAGGCAGTTCAGGTTGGCCTGCTGTC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGTCCTTCACCTCCGATaGCTTGTCCGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIVLHLR*LVREPP
Trigger: CGGGGGCTCCCGGACAAGTCATCGGAGGTGAAGGAC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAGACCAGGTGGCCCCTaGGGGCCAGGGTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHRPGGP*GPGSPR
Trigger: CCGTGGAGACCCTGGCCCTCAGGGGCCACCTGGTCT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCACTAGGGCCTGGCTaGCCCATCTCTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPLGPG*PISPRG
Trigger: CCCTCGAGGAGAGATGGGTCAGCCAGGCCCTAGTGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCACTAGGGCCTGGCTaGCCCATCTCTCCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPLGPG*PISPRG
Trigger: CCCTCGAGGAGAGATGGGTCAGCCAGGCCCTAGTGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCCTGGCAACCCGGCTaGGCCCTTGTCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSWQPG*ALVTRL
Trigger: GAGCCTGGTGACAAGGGCTCAGCCGGGTTGCCAGGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTCCTGGCAACCCGGCTaGGCCCTTGTCACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTSWQPG*ALVTRL
Trigger: GAGCCTGGTGACAAGGGCTCAGCCGGGTTGCCAGGA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCTGCTGCACCAGGTTaGCCCTGGGGTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPAAPG*PWGPRS
Trigger: ACTCCTGGGACCCCAGGGTCAACCTGGTGCAGCAGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCGGGGCGCCTCTaGCAGGATCCCGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAHSGRL*QDPGAE
Trigger: CTCTGCGCCGGGATCCTGGCAGAGGCGCCCCGAGTG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCACTCGGGGCGCCTCTaGCAGGATCCCGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHHSGRL*QDPGAE
Trigger: CTCTGCGCCGGGATCCTGGCAGAGGCGCCCCGAGTG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGTCACTCTCTCCCTGTaGTGGGCTCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLVTLSL*WARTRG
Trigger: GCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGTGAC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGGACGTTCACCTCCTaGCGCTCACTCGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGTFTS*RSLGSG
Trigger: GCCACTGCCGAGTGAGCGGCAGGAGGTGAACGTCCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGCGGGCCCCACACTaGGGCCAAATAGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCWRAPH*GQIGCS
Trigger: TGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACCGGGCGCAGGGTCTaGTCAACAGAAGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATGRRV*STEASV
Trigger: CACTGACGCTTCTGTTGAGCAGACCCTGCGCCCGGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAGTGGGAACCACGGTTaGAGGGGTGGCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCSGNHG*RGGHLV
Trigger: CACGAGGTGGCCACCCCTGCAACCGTGGTTCCCACT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCAATGGAGACAGGTGTaGCCTCGCGGTCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAQWRQV*PRGPRQ
Trigger: TTGTCGGGGACCGCGAGGGCACACCTGTCTCCATTG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATGCAGAAGGAAGCCCTaGGCTCTGGGCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTCRRKP*ALGTGS
Trigger: GGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCA...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGCGCGCAGTCACCTCTaGAGAGGGCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIARSHL*RGPFSS
Trigger: GCTGGAGAAGGGCCCTCTGCAGAGGTGACTGCGCGC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGCGCGCAGTCACCTCTaGAGAGGGCCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTARSHL*RGPFSS
Trigger: GCTGGAGAAGGGCCCTCTGCAGAGGTGACTGCGCGC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCACGAGGTGACTCAGTaGGCGCAGTCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAHEVTQ*AQSPLQ
Trigger: CTGCAGAGGTGACTGCGCGCACTGAGTCACCTCGTG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGATCACCCCTGGTACGTaGTGGCGGCGCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTITPGT*WRRPGA
Trigger: TGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGAT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGTCACCCTTTTCTCCTaGTGGGCCTCGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAVTLFS*WASDTW
Trigger: CCAGGTGTCCGAGGCCCAGCAGGAGAAAAGGGTGAC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTCTCCTGGCCTTCCTaGCTCTCCCACACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSLSWPS*LSHTPS
Trigger: GCTGGGGGTGTGGGAGAGGCAGGAAGGCCAGGAGAG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCTCCTGGCCTTCCTaGCTCTCCCACACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTLSWPS*LSHTPS
Trigger: GCTGGGGGTGTGGGAGAGGCAGGAAGGCCAGGAGAG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACTGGTAGACCCGGGTTaGCGTCCTGACCCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTLVDPG*RPDPSV
Trigger: GACCGAGGGGTCAGGACGGCAACCCGGGTCTACCAG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCATCTTCACCCCGGATaGCTGGCTCCCCACGCTCGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTHLHPG*LAPHAR
Trigger: GCGAGCGTGGGGAGCCAGGCATCCGGGGTGAAGATG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCGATCAGGCCCTCCTTaGCAGGGGCCCCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHRSGPP*QGPPTG
Trigger: GCCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCCTTGGGGCCTGGCTaGCCGTCAAAGCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPLGPG*PSKPRS
Trigger: TGACCGAGGCTTTGACGGGCAGCCAGGCCCCAAGGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCTTGGGGCCTGGCTaGCCGTCAAAGCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPLGPG*PSKPRS
Trigger: TGACCGAGGCTTTGACGGGCAGCCAGGCCCCAAGGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCCCGCCGCCGCCGCTaGAGTCTCTCGGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSRRRR*SLSGRA
Trigger: TGCTCTGCCCGAGAGACTGCAGCGGCGGCGGCGGGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCCGCAGCCGCACACTaGTCTCACCAGCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPAAAH*SHQLGR
Trigger: ACGTCCCAGCTGGTGAGACCAGTGTGCGGCTGCGGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTTGGTACTCGGTCAGTaGCCGGAGACCCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLLVLGQ*PETPQP
Trigger: CGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTAGCCAGTGGCACCTaGCACACTCCGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRVASGT*HTPPGH
Trigger: GTGGCCTGGCGGAGTGTGCCAGGTGCCACTGGCTAC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTAGCCAGTGGCACCTaGCACACTCCGCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVASGT*HTPPGH
Trigger: GTGGCCTGGCGGAGTGTGCCAGGTGCCACTGGCTAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGTGGCACCAGGGACTaGGCTCCAGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGGTRD*APGHSH
Trigger: GTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGCCACC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGGGCAGTGTCTGGCTaGACTCCGGACCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGAVSG*TPDHCL
Trigger: CAGGCAGTGGTCCGGAGTCCAGCCAGACACTGCCCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGTATCTGGTGCCTCATaGGGCCGCCTTCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCVSGAS*GRLHSG
Trigger: GCCGGAGTGAAGGCGGCCCCATGAGGCACCAGATAC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACCCGGGACTGTTCCTaGCCACCCTCAGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTRDCS*PPSGCQ
Trigger: CTGGCAACCTGAGGGTGGCCAGGAACAGTCCCGGGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCGGTACTGTGTCGCTaGCTCCAGCCCGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTAVLCR*LQPVQV
Trigger: CACCTGGACGGGCTGGAGCCAGCGACACAGTACCGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCGGTACTGTGTCGCTaGCTCCAGCCCGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLAVLCR*LQPVQV
Trigger: CACCTGGACGGGCTGGAGCCAGCGACACAGTACCGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGACCCAGGCACTTCCTaGCCAGGGCCTCTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLDPGTS*PGPLSG
Trigger: GCCACTCAGAGGCCCTGGCCAGGAAGTGCCTGGGTC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCCACGGGGGCACACTaGCGTCTGTGTGACAGATGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCATGAH*RLCDRC
Trigger: GCATCTGTCACACAGACGCCAGTGTGCCCCCGTGGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAACCCCTGGTACGTGCTaGCGGCGCCCAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTTPGTC*RRPGAS
Trigger: AGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAACCCCTGGTACGTGCTaGCGGCGCCCAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSTPGTC*RRPGAS
Trigger: AGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCAGAACCATCACCCCTaGTACGTGCTGGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLQNHHP*YVLAAP
Trigger: GGGCGCCGCCAGCACGTACCAGGGGTGATGGTTCTG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCGACGCAGCTGCTCTaGGTCCGCTCCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLATQLL*VRSSHS
Trigger: GGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCGCCCTTGGCAGTaGCACTTCCAGGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSRPWQ*HFQGAP
Trigger: AGGGGCCCCCTGGAAGTGCCACTGCCAAGGGCGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCTCGCCCTTGGCAGTaGCACTTCCAGGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSRPWQ*HFQGAP
Trigger: AGGGGCCCCCTGGAAGTGCCACTGCCAAGGGCGAGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAATGCCACCTTCACCTaGTCCAGGGGGACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCNATFT*SRGTPL
Trigger: GAGCGGGGTCCCCCTGGACCAGGTGAAGGTGGCATT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGCCAGTGGGTCCTGGTaGCCCTTCAGGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTASGSW*PFRTLG
Trigger: GCCAAGGGTCCTGAAGGGCCACCAGGACCCACTGGC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCCAGTGGGTCCTGGTaGCCCTTCAGGACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLASGSW*PFRTLG
Trigger: GCCAAGGGTCCTGAAGGGCCACCAGGACCCACTGGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCGGCCAGTGGGTCCTaGTGGCCCTTCAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTAASGS*WPFRTL
Trigger: AAGGGTCCTGAAGGGCCACCAGGACCCACTGGCCGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCTTGGCGGCCAGTaGGTCCTGGTGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLLGGQ*VLVALQ
Trigger: CTGAAGGGCCACCAGGACCCACTGGCCGCCAAGGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCTCCTTGGCGGCCAGTaGGTCCTGGTGGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLLLGGQ*VLVALQ
Trigger: CTGAAGGGCCACCAGGACCCACTGGCCGCCAAGGAG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGGCCCCGTTCCCCTTaGACTCCGGTAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGPRSP*TPVAPL
Trigger: CAGAGGAGCTACCGGAGTCCAAGGGGAACGGGGCCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAGGCCTGGAGGCCCCTaGGGTCCAAGGATACCAGGA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCRPGGP*GPRIPG
Trigger: TCCTGGTATCCTTGGACCCCAGGGGCCTCCAGGCCT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGGGCCCGTGCCTCCTaGGACACCAGGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGARAS*DTRKTL
Trigger: CAGGGTTTTCCTGGTGTCCCAGGAGGCACGGGCCCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGGCCCTGCTCCCCTTTaGATCCAGTCTCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCGPAPL*IQSPHG
Trigger: ACCGTGGGGAGACTGGATCCAAAGGGGAGCAGGGCC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCGCCTGAGTCCCCCTTaGGGCCTCGACGCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHRLSPP*GLDAVR
Trigger: CCGAACGGCGTCGAGGCCCCAAGGGGGACTCAGGCG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCAGGAAAGCCGATaGGGCCCTCCTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLQESR*GPPCLG
Trigger: CCCCAGGCAAGGAGGGCCCCATCGGCTTTCCTGGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGCACCATCTCGACCTaGGGCTCCCGGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGTIST*GSRLPC
Trigger: ACAGGGAAGCCGGGAGCCCCAGGTCGAGATGGTGCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGTCCTCGGTCACCTTTaGCTCCCGGCTCACCCACCA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCVLGHL*LPAHPP
Trigger: TGGTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGAC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCTCGCCTCGCGGCCCTaGCAGTCCTCGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRLASRP*QSSVTF
Trigger: AAAGGTGACCGAGGACTGCCAGGGCCGCGAGGCGAG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGATTCCTTCTCTCCCTaGGGGGCCTGCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRDSFSP*GACQTP
Trigger: CGGGGTCTGGCAGGCCCCCCAGGGAGAGAAGGAATC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGATTCCTTCTCTCCCTaGGGGGCCTGCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLDSFSP*GACQTP
Trigger: CGGGGTCTGGCAGGCCCCCCAGGGAGAGAAGGAATC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTCACCCTTGGGGCCTaGCTGCCCGTCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVTLGA*LPVKAS
Trigger: CGAGGCTTTGACGGGCAGCCAGGCCCCAAGGGTGAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGGCACAGCATGGAGCTaGGAGCCGGCAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCGTAWS*EPAVSA
Trigger: TGCAGACACTGCCGGCTCCCAGCTCCATGCTGTGCC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTATGTGGGGCCCAGGATaGCCGGGCGCAGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAMWGPG*PGAGSA
Trigger: AGCAGACCCTGCGCCCGGTCATCCTGGGCCCCACAT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGGTGCTGCGCACAATaGTGCGGTACTGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGCCAQ*CGTGWH
Trigger: GTGCCACCCAGTACCGCATCATTGTGCGCAGCACCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCACTCGCGTTGCATCTaGCACCACAACCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRHSRCI*HHNPQP
Trigger: GGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACACTCGCGTTGCATCTaGCACCACAACCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTHSRCI*HHNPQP
Trigger: GGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCTCTGGGCCGTGGGCTaGGTGCCAGGAAACCCTGTA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLLWAVG*VPGNPV
Trigger: TACAGGGTTTCCTGGCACTCAGCCCACGGCCCAGAG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCTCTCCAGGAGGCCCTaGGTCACCTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHLSRRP*VTWGSC
Trigger: GCAGGACCCCCAGGTGACTCAGGGCCTCCTGGAGAG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACTCCCCGGTCTCCTTTaGTGCCTGGCACACCCCTGT +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTLPGLL*CLAHPC
Trigger: ACAGGGGTGTGCCAGGCATCAAAGGAGACCGGGGAG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCTCGCGGAAATTGCTaGGGCCAATGGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPRGNC*GQWMRS
Trigger: GCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACCCTGTGCACTGGCTaGTCCAGAGAAAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATLCTG*SRERQH
Trigger: GTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACCCCCAGAGCCAAGTaGATCCAGGCCGAACTCTGT +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATPRAK*IQAELC
Trigger: ACAGAGTTCGGCCTGGATGCACTTGGCTCTGGGGGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCAGGGCCCAGCTCCTaGTGCTGTGTGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPGPSS*CCVGPP
Trigger: TGGTGGGCCCACACAGCAGCAGGAGCTGGGCCCTGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTGGCGGGCCCCACACTaGGGCCAAATAGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLWRAPH*GQIGCS
Trigger: TGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACAGGGCCCTCCTCTCTaGCTCGCAGTACCGACACAG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTQGPPL*LAVPTQ
Trigger: CTGTGTCGGTACTGCGAGGCAGAGAGGAGGGCCCTG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCATCCCTGGAAGTGTCTaGGGGGACCCAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCIPGSV*GDPGTS
Trigger: GGAAGTGCCTGGGTCCCCGCAGACACTTCCAGGGAT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGCCAAGCGACGCAGCTaGTCTGGGTCCGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAAKRRS*SGSAPA
Trigger: GGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCTCCCCAGGAGCAATaGCACCTTCACCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCAPQEQ*HLHLVQ
Trigger: CTGGACCAGGTGAAGGTGGCATTGCTCCTGGGGAGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAAGGCCACGCTCGCCTaGTTTTCCAGGCAAACCCGG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCKATLA*FSRQTR
Trigger: CCGGGTTTGCCTGGAAAAGCAGGCGAGCGTGGCCTT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCACACCCCCAGCCCTaGCTGGGAGCCCGGGAATAC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPHPQP*LGAREY
Trigger: GTATTCCCGGGCTCCCAGGCAGGGCTGGGGGTGTGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGGCCTCTTGGACCCTaGAGACCCGGCTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGPLGP*RPGFPS
Trigger: TGAAGGGAAGCCGGGTCTGCAGGGTCCAAGAGGCCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGGCCTCTTGGACCCTaGAGACCCGGCTTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGPLGP*RPGFPS
Trigger: TGAAGGGAAGCCGGGTCTGCAGGGTCCAAGAGGCCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCAGGCTCTCCCTTGCTaGCCTTGTCACCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLQALPC*PCHQGP
Trigger: GGGACCCTGGTGACAAGGGCAGCAAGGGAGAGCCTG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCACCAGGCTCTCCCTTaGTGCCCTTGTCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCHQALP*CPCHQG
Trigger: ACCCTGGTGACAAGGGCAGCAAGGGAGAGCCTGGTG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGACCAGGGATCCCTGCTaGACCAGGTTGACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTTRDPC*TRLTLG
Trigger: CCCCAGGGTCAACCTGGTGCAGCAGGGATCCCTGGT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGACAGGCCTCTGTGCTaGCTGTCACAGCCCGATGGT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCDRPLC*LSQPDG
Trigger: ACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACACGCACGCTCACGTaGACACAAGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATRTLT*TQASST
Trigger: GGTGCTAGAGGCTTGTGTGCACGTGAGCGTGCGTGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCCCTTGCTCCCCCGTaGCCTTGGCAGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASLAPP*PWQVRA
Trigger: GGCTCGGACCTGCCAAGGCCACGGGGGAGCAAGGGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328333.12
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCGCTGTACTGCACTGTaGCAAAGCGCACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTARCTAL*QSAHPV
Trigger: CACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCAGGTCGGGCCAGCTaGGGCAGGAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPGRAS*GRKTWS
Trigger: TGACCATGTCTTCCTGCCCCAGCTGGCCCGACCTGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCAGGTCGGGCCAGCTaGGGCAGGAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPGRAS*GRKTWS
Trigger: TGACCATGTCTTCCTGCCCCAGCTGGCCCGACCTGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCCCTTCAGCCTTTaGGCAGCTGTGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCCPFSL*AAVSTR
Trigger: CCTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCTCCCCGATGCTGTTaGCGTAGAGGGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPPRCC*RRGQSQ
Trigger: CTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGCCCTTCTAGGGCAGTaGTCCGAGCTGTCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSALLGQ*SELSRS
Trigger: TGAGCGGGACAGCTCGGACCACTGCCCTAGAAGGGC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCACACGGTAGCCAGTaGCACCTGGCACACTCCGCC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSHGSQ*HLAHSA
Trigger: GGCGGAGTGTGCCAGGTGCCACTGGCTACCGTGTGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCAGCTCTGGTCCAGTaGGAACCACGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLAALVQ*EPRLQG
Trigger: CCCCTGCAACCGTGGTTCCCACTGGACCAGAGCTGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCCCGGGCAGCTCGGTaGCTTGCAGGTCTGTTACAG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTARAAR*LAGLLQ
Trigger: CTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCCTGGAACAGCAAGTaGAGTTTCCGGCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPWNSK*SFRLPA
Trigger: CGCCGGGAGCCGGAAACTCCACTTGCTGTTCCAGGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCTGGAACAGCAAGTaGAGTTTCCGGCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPWNSK*SFRLPA
Trigger: CGCCGGGAGCCGGAAACTCCACTTGCTGTTCCAGGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCTGGGGGCAGTGTCTaGCTGGACTCCGGACCACTG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSGGSV*LDSGPL
Trigger: CAGTGGTCCGGAGTCCAGCCAGACACTGCCCCCAGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTCTGGGGGCAGTGTCTaGCTGGACTCCGGACCACTG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTSGGSV*LDSGPL
Trigger: CAGTGGTCCGGAGTCCAGCCAGACACTGCCCCCAGA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTGTGGCAGTAGAGTCTaGGGGCAGTGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTACGSRV*GQCLAG
Trigger: TCCAGCCAGACACTGCCCCCAGACTCTACTGCCACA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGATGGACCGTCCTCACTaGGCCCAGTGGGTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTMDRPH*AQWVRS
Trigger: CGAACGGACCCACTGGGCCCAGTGAGGACGGTCCAT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGATTTCTCTGGGCCGTaGGCTGAGTGCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTADFSGP*AECQET
Trigger: GGTTTCCTGGCACTCAGCCCACGGCCCAGAGAAATC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCAGCTCAGCCACCGTaGCCTCCCCAGAAACCAACT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCPAQPP*PPQKPT
Trigger: AGTTGGTTTCTGGGGAGGCCACGGTGGCTGAGCTGG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCAGACCACTGACTGCCTaGTCCAGGCTTGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTARPLTA*SRLGPS
Trigger: TGATGGGCCAAGCCTGGACCAGGCAGTCAGTGGTCT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTCCAGGAGGTCCCCGTaGGCCCTGCTCACCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSRRSP*ALLTRR
Trigger: TCTCCGGGTGAGCAGGGCCCACGGGGACCTCCTGGA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCTCACCCAGGGGCCCTaGAAAGCCCCGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHILTQGP*KAPVTF
Trigger: AAAGGTGACCGGGGCTTTCCAGGGCCCCTGGGTGAG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTCACCCAGGGGCCCTaGAAAGCCCCGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSLTQGP*KAPVTF
Trigger: AAAGGTGACCGGGGCTTTCCAGGGCCCCTGGGTGAG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGGATCCCGCTGGGCCTaGGGGTCCACGTTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHGSRWA*GSTFAL
Trigger: AAGGGCGAACGTGGACCCCCAGGCCCAGCGGGATCC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAAGAACCAAGCCGGGTaGGCCCCGTTCCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTKNQAG*APFPLD
Trigger: GTCCAAGGGGAACGGGGCCCACCCGGCTTGGTTCTT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCACGGTCACCCTTaGGTCCAGATGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPHGHP*VQMIQG
Trigger: GCCCTGGATCATCTGGACCCAAGGGTGACCGTGGGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACCCCACGGTCACCCTTaGGTCCAGATGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTPHGHP*VQMIQG
Trigger: GCCCTGGATCATCTGGACCCAAGGGTGACCGTGGGG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGCCAGGATCACCCTTaGGCCCTCGAGGACCCTCTT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGQDHP*ALEDPL
Trigger: AAGAGGGTCCTCGAGGGCCCAAGGGTGATCCTGGCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACCCTTTTCTCCTGCTaGGCCTCGGACACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTLFSC*ASDTWV
Trigger: GACCCAGGTGTCCGAGGCCCAGCAGGAGAAAAGGGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAAGCCCGTCTCTCCCTaGGTCCCCAGCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTKPVSP*VPSFAC
Trigger: GCAGGCAAAGCTGGGGACCCAGGGAGAGACGGGCTT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGAAGCCCGTCTCTCCCTaGGTCCCCAGCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLKPVSP*VPSFAC
Trigger: GCAGGCAAAGCTGGGGACCCAGGGAGAGACGGGCTT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATTCTCCACGGAGGCCTaGAAGCCCGTCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSFSTEA*KPVSPW
Trigger: CCAGGGAGAGACGGGCTTCCAGGCCTCCGTGGAGAA...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATTCTCCACGGAGGCCTaGAAGCCCGTCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTFSTEA*KPVSPW
Trigger: CCAGGGAGAGACGGGCTTCCAGGCCTCCGTGGAGAA...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAACACCAGGAAAACCCTaGCCAGGAGGGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSTPGKP*PGGPTG
Trigger: GCCAGTGGGCCCTCCTGGCCAGGGTTTTCCTGGTGT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGACACCAGGAAAACCCTaGCCAGGAGGGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTTPGKP*PGGPTG
Trigger: GCCAGTGGGCCCTCCTGGCCAGGGTTTTCCTGGTGT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGGCCCTGCTCCCCTTTaGATCCAGTCTCCCCACGGT +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSGPAPL*IQSPHG
Trigger: ACCGTGGGGAGACTGGATCCAAAGGGGAGCAGGGCC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACCCCCAGCCCTGCCTaGGAGCCCGGGAATACCAGG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATPSPA*EPGNTR
Trigger: CCTGGTATTCCCGGGCTCCCAGGCAGGGCTGGGGGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAGTCAGGCCCCGTCCTaGAGGTCCTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSQAPS*RSCLSR
Trigger: CCTGGAGAGACAGGACCTCCAGGACGGGGCCTGACT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGAGTCAGGCCCCGTCCTaGAGGTCCTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSQAPS*RSCLSR
Trigger: CCTGGAGAGACAGGACCTCCAGGACGGGGCCTGACT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTCCTCGGTCACCTTTaGCTCCCGGCTCACCCACCA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVLGHL*LPAHPP
Trigger: TGGTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGATCTCCCTTCACACCTaGAGGGCCAGGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLISLHT*RARRPR
Trigger: CCTGGGCCTCCTGGCCCTCCAGGTGTGAAGGGAGAT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAGCCTCGGTCACCCTTaGGACCGATCAGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSLGHP*DRSGPP
Trigger: AGGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCGCCCTGGTCACCCTTaGGGCCTGGCTGCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHRPGHP*GLAARQ
Trigger: TTGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCACCAACACTGCCAGGTaGCCCTGGGGGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRTNTAR*PWGTSR
Trigger: TCTGCTGGTCCCCCAGGGCCACCTGGCAGTGTTGGT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTCCTTCGGGGCCTCTaGGACCAACACTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVLRGL*DQHCQV
Trigger: CACCTGGCAGTGTTGGTCCCAGAGGCCCCGAAGGAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTCCTTCGGGGCCTCTaGGACCAACACTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVLRGL*DQHCQV
Trigger: CACCTGGCAGTGTTGGTCCCAGAGGCCCCGAAGGAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCAGCACAGGCACAGCATaGAGCTGGGAGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHISTGTA*SWEPAV
Trigger: CACTGCCGGCTCCCAGCTCCATGCTGTGCCTGTGCT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGGGACTTCCCGTCTGTaGTCAGGATGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCGTSRL*SGCRPW
Trigger: CCAAGGTCTGCATCCTGATCACAGACGGGAAGTCCC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGTCACTGGTGGGCTGTaGGGCAACTCGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTVTGGL*GNSLQL
Trigger: GAGCTGAAGCGAGTTGCCTCACAGCCCACCAGTGAC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCAGAGTGTAGAGTGTaGGGCGGTACTCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLAECRV*GGTQCP
Trigger: CGGGCACTGAGTACCGCCTCACACTCTACACTCTGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCGTTCGAGCCACGATaGCTGCAGCAGGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPFEPR*LQQGPP
Trigger: AGGAGGGCCCTGCTGCAGTCATCGTGGCTCGAACGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGATGAGCTGCTGGCCTaGGTCACATGGACCGTCCTC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIDELLA*VTWTVL
Trigger: GAGGACGGTCCATGTGACTCAGGCCAGCAGCTCATC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGATGAGCTGCTGGCCTaGGTCACATGGACCGTCCTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLDELLA*VTWTVL
Trigger: GAGGACGGTCCATGTGACTCAGGCCAGCAGCTCATC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCGCACTGAGTAGCTaGCTCCACCTTCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLALSS*LHLRDP
Trigger: GGGGTCTCGAAGGTGGAGTCAGCTACTCAGTGCGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTCGCACTGAGTAGCTaGCTCCACCTTCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLALSS*LHLRDP
Trigger: GGGGTCTCGAAGGTGGAGTCAGCTACTCAGTGCGAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACACTGGCGTCTGTGTaGCAGATGCCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTLASV*QMPQDP
Trigger: GGGGTCCTGAGGCATCTGTCACACAGACGCCAGTGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACACTGGCGTCTGTGTaGCAGATGCCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLTLASV*QMPQDP
Trigger: GGGGTCCTGAGGCATCTGTCACACAGACGCCAGTGT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGACAGCAGGCCAACCTaGACTGCCTGTGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLDSRPT*TACGPR
Trigger: TCTTGGGCCACAGGCAGTTCAGGTTGGCCTGCTGTC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCTCACGGATGGGGCTaGATATGTCACCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPHGWG*ICHLSR
Trigger: CCTTGAGAGGTGACATATTCAGCCCCATCCGTGAGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCAGGGCAGATGCCTTaGTGCCAGCAGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCAGQMP*CQQFPA
Trigger: TGCTGGAAACTGCTGGCATCAAGGCATCTGCCCTGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCTGGAGCCCCTTTCTaGCCATCTTCCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPGAPF*PSSPGS
Trigger: AGACCCTGGGGAAGATGGTCAGAAAGGGGCTCCAGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCTGCTGCACCAGGTTaGCCCTGGGGTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPAAPG*PWGPRS
Trigger: ACTCCTGGGACCCCAGGGTCAACCTGGTGCAGCAGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTGATCCAGATGCGATaGACTGGCCCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVIQMR*TGPGRH
Trigger: GTGCCTGCCAGGGCCAGTTCATCGCATCTGGATCAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGTGATCCAGATGCGATaGACTGGCCCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTVIQMR*TGPGRH
Trigger: GTGCCTGCCAGGGCCAGTTCATCGCATCTGGATCAC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCTTCCTCCTCTGCATaGGAGACGCGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSSSSA*ETRSTG
Trigger: GCCTGTGCTCCGCGTCTCTCATGCAGAGGAGGAAGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCTTCCTCCTCTGCATaGGAGACGCGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSSSSA*ETRSTG
Trigger: GCCTGTGCTCCGCGTCTCTCATGCAGAGGAGGAAGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGTCACTCTCTCCCTGTaGTGGGCTCGCACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHVTLSL*WARTRG
Trigger: GCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGTGAC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCGGCGTAAAGGCGCGTaGAGGTCACTCTCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLRRKGA*RSLSPC
Trigger: ACAGGGAGAGAGTGACCTGCACGCGCCTTTACGCCG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCCCTTCGAGAAAGCTaGGGACCTCGCGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCALRES*GPRGNC
Trigger: GCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCCACCAGCAGTCGTaGACACTCTCCGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIRHQQS*TLSGKR
Trigger: TCGTTTCCCGGAGAGTGTGCACGACTGCTGGTGGCG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGCCACCAGCAGTCGTaGACACTCTCCGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRRHQQS*TLSGKR
Trigger: TCGTTTCCCGGAGAGTGTGCACGACTGCTGGTGGCG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGGGACGTTCACCTCCTaGCGCTCACTCGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAGTFTS*RSLGSG
Trigger: GCCACTGCCGAGTGAGCGGCAGGAGGTGAACGTCCC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGGCAGTACCACCTTCTaGGGTGGCTCCAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTGSTTF*GGSKPV
Trigger: GACTGGCTTGGAGCCACCGCAGAAGGTGGTACTGCC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGCAGCTCGGTGGCTTaGAGGTCTGTTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGSSVA*RSVTGL
Trigger: GAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGCAGCTCGGTGGCTTaGAGGTCTGTTACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGSSVA*RSVTGL
Trigger: GAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCGAGCCACGATGACTaGAGCAGGGCCCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSSHDD*SRALLS
Trigger: AGAGAGGAGGGCCCTGCTGCAGTCATCGTGGCTCGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCGAGCCACGATGACTaGAGCAGGGCCCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSSHDD*SRALLS
Trigger: AGAGAGGAGGGCCCTGCTGCAGTCATCGTGGCTCGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGGCCGTGGGCTGAGTaGCAGGAAACCCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGPWAE*QETLYP
Trigger: AGGATACAGGGTTTCCTGGCACTCAGCCCACGGCCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCTGGGAGTATCTGGTaGCTCATGGGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLPGSIW*LMGPPS
Trigger: TGAAGGCGGCCCCATGAGGCACCAGATACTCCCAGG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAATGGAGACAGGTGTaGCCTCGCGGTCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRQWRQV*PRGPRQ
Trigger: TTGTCGGGGACCGCGAGGGCACACCTGTCTCCATTG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTGCAGAAGGAAGCCCTaGGCTCTGGGCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHCRRKP*ALGTGS
Trigger: GGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTGGCCACCCTCAGGTTaGCAGTGCAGAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRWPPSG*QCRRKP
Trigger: GGGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCATCCCTGGAAGTGTCTaGGGGGACCCAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRIPGSV*GDPGTS
Trigger: GGAAGTGCCTGGGTCCCCGCAGACACTTCCAGGGAT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGTCTGTGTGACAGATaGCTCAGGACCCCGCACACC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIRLCDR*LRTPHT
Trigger: GGTGTGCGGGGTCCTGAGGCATCTGTCACACAGACG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTCTGTGTGACAGATaGCTCAGGACCCCGCACACC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTRLCDR*LRTPHT
Trigger: GGTGTGCGGGGTCCTGAGGCATCTGTCACACAGACG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCCAAGAGGCCCAAGTaGCAACACCAGACGCTCCAG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPKRPK*QHQTLQ
Trigger: CTGGAGCGTCTGGTGTTGGCACTTGGGCCTCTTGGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCAAGAGGCCCAAGTaGCAACACCAGACGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPKRPK*QHQTLQ
Trigger: CTGGAGCGTCTGGTGTTGGCACTTGGGCCTCTTGGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGGCCAGACCACTGACTaGCTGGTCCAGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHGQTTD*LVQAWP
Trigger: GGGCCAAGCCTGGACCAGGCAGTCAGTGGTCTGGCC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGGCCAGACCACTGACTaGCTGGTCCAGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAGQTTD*LVQAWP
Trigger: GGGCCAAGCCTGGACCAGGCAGTCAGTGGTCTGGCC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGCCTGGACGCCCATCTaGTCCAGGGAAGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAAWTPI*SREAPL
Trigger: GAGAGGGGCTTCCCTGGAGCAGATGGGCGTCCAGGC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCCTGGACGCCCATCTaGTCCAGGGAAGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHAWTPI*SREAPL
Trigger: GAGAGGGGCTTCCCTGGAGCAGATGGGCGTCCAGGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGCTCCCCAGGAGCAATaGCACCTTCACCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIAPQEQ*HLHLVQ
Trigger: CTGGACCAGGTGAAGGTGGCATTGCTCCTGGGGAGC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAAGGCCACGCTCGCCTaGTTTTCCAGGCAAACCCGG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRKATLA*FSRQTR
Trigger: CCGGGTTTGCCTGGAAAAGCAGGCGAGCGTGGCCTT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCGAAACCCTTCAATaGCCCTTTCCCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPETLQ*PFPQGL
Trigger: GAGCCCCTGGGGAAAGGGGCATTGAAGGGTTTCGGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTCACCCTTTTCTCCTaGTGGGCCTCGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRVTLFS*WASDTW
Trigger: CCAGGTGTCCGAGGCCCAGCAGGAGAAAAGGGTGAC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTCCCCAGCTTTGCCTaGAGCACCATTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVPSFA*STIRPR
Trigger: TCTGGGCCGAATGGTGCTGCAGGCAAAGCTGGGGAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTCCCCAGCTTTGCCTaGAGCACCATTCGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVPSFA*STIRPR
Trigger: TCTGGGCCGAATGGTGCTGCAGGCAAAGCTGGGGAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTCTCCAGGGAGGCCCTaGTCCCCTTTGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTSPGRP*SPLDPV
Trigger: GACTGGATCCAAAGGGGAGCAGGGCCTCCCTGGAGA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCCAGGGAGGCCCTaGTCCCCTTTGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSPGRP*SPLDPV
Trigger: GACTGGATCCAAAGGGGAGCAGGGCCTCCCTGGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCTTCTCTCCCTTTaGTCCAGGGAGCCCGACCAC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTSLLSL*SREPDH
Trigger: GTGGTCGGGCTCCCTGGAGCAAAGGGAGAGAAGGGA...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACCAGGCTCTCCCTTaGTGCCCTTGTCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLHQALP*CPCHQG
Trigger: ACCCTGGTGACAAGGGCAGCAAGGGAGAGCCTGGTG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGTCACCAGGGATCCCTaGTGCACCAGGTTGACCCTG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTVTRDP*CTRLTL
Trigger: CAGGGTCAACCTGGTGCAGCAGGGATCCCTGGTGAC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTCACCAGGGATCCCTaGTGCACCAGGTTGACCCTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVTRDP*CTRLTL
Trigger: CAGGGTCAACCTGGTGCAGCAGGGATCCCTGGTGAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCTCTGGGACCAACACTaGCAGGTGGCCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHLWDQH*QVALGD
Trigger: GTCCCCCAGGGCCACCTGGCAGTGTTGGTCCCAGAG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGAGCCGGCAGTGTCTaGAGCATAACTAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGAGSV*SITREG
Trigger: CCCCTCCCTAGTTATGCTGCAGACACTGCCGGCTCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGCTCTTCCTCCTCTaGATGAGAGACGCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPLFLL*MRDAEH
Trigger: GTGCTCCGCGTCTCTCATGCAGAGGAGGAAGAGCGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCGCTCTTCCTCCTCTaGATGAGAGACGCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPLFLL*MRDAEH
Trigger: GTGCTCCGCGTCTCTCATGCAGAGGAGGAAGAGCGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGCAGGGTGTAGGCAGTaGAGGAGCCCTCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSAGCRQ*RSPHPV
Trigger: CACTGGATGAGGGCTCCTGCACTGCCTACACCCTGC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGACAGGCCTCTGTGCTaGCTGTCACAGCCCGATGGT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLDRPLC*LSQPDG
Trigger: ACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACACGCACGCTCACGTaGACACAAGCCTCTAGCACC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTRTLT*TQASST
Trigger: GGTGCTAGAGGCTTGTGTGCACGTGAGCGTGCGTGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCAGGATGCAGACCTTaGGGACACCAGGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSGCRP*GHQVGP
Trigger: TGGCCCGACCTGGTGTCCCCAAGGTCTGCATCCTGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCAGGATGCAGACCTTaGGGACACCAGGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSGCRP*GHQVGP
Trigger: TGGCCCGACCTGGTGTCCCCAAGGTCTGCATCCTGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGTGTCCACCAGGTCCTaGGACTTCCCGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCVSTRS*DFPSVI
Trigger: GATCACAGACGGGAAGTCCCAGGACCTGGTGGACAC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTGCCCCTTCAGCCTTTaGGCAGCTGTGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLCPFSL*AAVSTR
Trigger: CCTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAGTCACAGGGCCACTaGCCGCTGTCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTQSQGH*PLSTVL
Trigger: GAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCCCGCAGCCGCACACTaGTCTCACCAGCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHPAAAH*SHQLGR
Trigger: ACGTCCCAGCTGGTGAGACCAGTGTGCGGCTGCGGG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCGCAATCACAGTCACTTaGTACTCGGTCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAAITVT*YSVSGR
Trigger: CCGGCCACTGACCGAGTACCAAGTGACTGTGATTGC...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTGGGCTGTGGTATTCTaGATGGTCAGTTCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAWAVVF*MVSSGP
Trigger: AGGGCCGGAACTGACCATCCAGAATACCACAGCCCA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTACCACCTTCTGCGGTaGCTCCAAGCCAGTCTCACG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCYHLLR*LQASLT
Trigger: CGTGAGACTGGCTTGGAGCCACCGCAGAAGGTGGTA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGCTCACAGGCAGCTCTaGTCCAGTGGGAACCACGGT +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIAHRQL*SSGNHG
Trigger: ACCGTGGTTCCCACTGGACCAGAGCTGCCTGTGAGC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCTCACAGGCAGCTCTaGTCCAGTGGGAACCACGGT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLAHRQL*SSGNHG
Trigger: ACCGTGGTTCCCACTGGACCAGAGCTGCCTGTGAGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGGTGGCACCAGGGACTaGGCTCCAGGACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAGGTRD*APGHSH
Trigger: GTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGCCACC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGTCCGCTCAACCCCCTaGGTGCTGCGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSVRSTP*VLRTMM
Trigger: CATCATTGTGCGCAGCACCCAGGGGGTTGAGCGGAC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTCCGCTCAACCCCCTaGGTGCTGCGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVRSTP*VLRTMM
Trigger: CATCATTGTGCGCAGCACCCAGGGGGTTGAGCGGAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGCTCAGCCACCGTaGCCTCCCCAGAAACCAACT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPAQPP*PPQKPT
Trigger: AGTTGGTTTCTGGGGAGGCCACGGTGGCTGAGCTGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCCACGCCAGCCACATaGGCCCTCACATGCACCGTA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSTPAT*ALTCTV
Trigger: TACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTCCACGCCAGCCACATaGGCCCTCACATGCACCGTA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLSTPAT*ALTCTV
Trigger: TACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAGCCCTGTCACCCGCTaGGAGCTTGAGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSPVTR*ELEIPG
Trigger: TCCAGGGATCTCAAGCTCCCAGCGGGTGACAGGGCT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAGCCCTGTCACCCGCTaGGAGCTTGAGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTSPVTR*ELEIPG
Trigger: TCCAGGGATCTCAAGCTCCCAGCGGGTGACAGGGCT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGATGGGAGCCATTCAGTaGGAACAGTGGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTMGAIQ*EQWGGP
Trigger: CGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCAT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAATGGGAGCCATTCAGTaGGAACAGTGGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTMGAIQ*EQWGGP
Trigger: CGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCAT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCAGAACCATCACCCCTaGTACGTGCTGGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHQNHHP*YVLAAP
Trigger: GGGCGCCGCCAGCACGTACCAGGGGTGATGGTTCTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTTAAGCCCAGAAGCCTaGGCCTCACGGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTLSPEA*ASRMGL
Trigger: CAGCCCCATCCGTGAGGCCCAGGCTTCTGGGCTTAA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCGACGCAGCTGCTCTaGGTCCGCTCCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHATQLL*VRSSHS
Trigger: GGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTGCCTGGTCCAGGCTTaGCCCATCATCCACGGCGAA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLCLVQA*PIIHGE
Trigger: TTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCTTTGGACAATACACTaGGCAGGGCTCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHILWTIH*AGLWPG
Trigger: CCCCGGCCAGAGCCCTGCCCAGTGTATTGTCCAAAG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACAGCCCCTCTCGCCCTTaGCAGTGGCACTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSPSRP*QWHFQG
Trigger: CCCCTGGAAGTGCCACTGCCAAGGGCGAGAGGGGCT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCAGACCCAGGTTGTCCTaGGAGGCCTGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIRPRLS*EAWSSI
Trigger: GATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGACCCAGGTTGTCCTaGGAGGCCTGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLRPRLS*EAWSSI
Trigger: GATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGCCCTTCAGGACCCTTaGCTCCAGGACGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLALQDP*LQDVQQ
Trigger: TTGCTGGACGTCCTGGAGCCAAGGGTCCTGAAGGGC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGGCCCCGTTCCCCTTaGACTCCGGTAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGPRSP*TPVAPL
Trigger: CAGAGGAGCTACCGGAGTCCAAGGGGAACGGGGCCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCCTTTTCTCCTGCTaGGCCTCGGACACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLTLFSC*ASDTWV
Trigger: GACCCAGGTGTCCGAGGCCCAGCAGGAGAAAAGGGT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTCCACGCTCACCCTTaGGGCCATCACGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLHAHP*GHHDLL
Trigger: GAGAAGGTCGTGATGGCCCCAAGGGTGAGCGTGGAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGGGCCCGTGCCTCCTaGGACACCAGGAAAACCCTG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGARAS*DTRKTL
Trigger: CAGGGTTTTCCTGGTGTCCCAGGAGGCACGGGCCCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACACCCGGGGCACCAGGTaGTCCAGGGTCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHTRGTR*SRVSMT
Trigger: GGTCATGGAGACCCTGGACCACCTGGTGCCCCGGGT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTTGTCCAGGCAAACCTaGAGACCCCTGTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCLSRQT*RPLWTH
Trigger: GTGGGTCCACAGGGGTCTCCAGGTTTGCCTGGACAA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGCACCATCTCGACCTaGGGCTCCCGGCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGTIST*GSRLPC
Trigger: ACAGGGAAGCCGGGAGCCCCAGGTCGAGATGGTGCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCTCGCCTCGCGGCCCTaGCAGTCCTCGGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHALASRP*QSSVTF
Trigger: AAAGGTGACCGAGGACTGCCAGGGCCGCGAGGCGAG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTCTCCACTAGGGCCTaGCTGACCCATCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSLSTRA*LTHLSS
Trigger: CGAGGAGAGATGGGTCAGCCAGGCCCTAGTGGAGAG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACTCTCCACTAGGGCCTaGCTGACCCATCTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTLSTRA*LTHLSS
Trigger: CGAGGAGAGATGGGTCAGCCAGGCCCTAGTGGAGAG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACACTCCATCCTTTCCTaGGGATCCCGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSHSILS*GSRVTR
Trigger: CCTGGTGACCCGGGATCCCCAGGAAAGGATGGAGTG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCAGATGCGATGAACTaGCCCTGGCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPDAMN*PWQAQC
Trigger: GCACTGTGCCTGCCAGGGCCAGTTCATCGCATCTGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCAGATGCGATGAACTaGCCCTGGCAGGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPDAMN*PWQAQC
Trigger: GCACTGTGCCTGCCAGGGCCAGTTCATCGCATCTGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGAGCCCTCATCCAGTaGCAGGGAACAGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGALIQ*QGTGVI
Trigger: GATGACCCCTGTTCCCTGCCACTGGATGAGGGCTCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGCAGTACCTGTCCCCTaGCTCTGGACCACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAAVPVP*LWTTRG
Trigger: ACCCCGGGTGGTCCAGAGCCAGGGGACAGGTACTGC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGCAGTACCTGTCCCCTaGCTCTGGACCACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHAVPVP*LWTTRG
Trigger: ACCCCGGGTGGTCCAGAGCCAGGGGACAGGTACTGC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGGACTTCCCGTCTGTaGTCAGGATGCAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGTSRL*SGCRPW
Trigger: CCAAGGTCTGCATCCTGATCACAGACGGGAAGTCCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGGTGCTGCGCACAATaGTGCGGTACTGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGCCAQ*CGTGWH
Trigger: GTGCCACCCAGTACCGCATCATTGTGCGCAGCACCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCAGTCACTCGCACTaGGTAGCTGACTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCCSHSH*VADSTF
Trigger: GAAGGTGGAGTCAGCTACTCAGTGCGAGTGACTGCA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGTAGTGAAGGATGCCTaGCACAGGGCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIVVKDA*HRAVAR
Trigger: TCTGGCCACAGCCCTGTGTCAGGCATCCTTCACTAC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTAGTGAAGGATGCCTaGCACAGGGCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVVKDA*HRAVAR
Trigger: TCTGGCCACAGCCCTGTGTCAGGCATCCTTCACTAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGCAGGGCAGATGCCTTaGTGCCAGCAGTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRAGQMP*CQQFPA
Trigger: TGCTGGAAACTGCTGGCATCAAGGCATCTGCCCTGC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCTGGGTCACCCTTaGAACCTTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLLGHP*NLWVLE
Trigger: CTCCAGGACCCAAAGGTTTCAAGGGTGACCCAGGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTCCTGGGTCACCCTTaGAACCTTTGGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLLGHP*NLWVLE
Trigger: CTCCAGGACCCAAAGGTTTCAAGGGTGACCCAGGAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCTCGAGGGCCTGTCTaGCCCGGGAACCCAACAACA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPRGPV*PGNPTT
Trigger: TGTTGTTGGGTTCCCGGGTCAGACAGGCCCTCGAGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCCTCGAGGGCCTGTCTaGCCCGGGAACCCAACAACA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHPRGPV*PGNPTT
Trigger: TGTTGTTGGGTTCCCGGGTCAGACAGGCCCTCGAGG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCCAGGATCACAGCTaGGTCTCCCTTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPQDHS*VSLVTL
Trigger: AAGGGTGACAAGGGAGACTCAGCTGTGATCCTGGGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCCCAGGATCACAGCTaGGTCTCCCTTGTCACCCTT +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPQDHS*VSLVTL
Trigger: AAGGGTGACAAGGGAGACTCAGCTGTGATCCTGGGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGGCCCCGGGGACCCATaGAGCCAACATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLGPGDP*SQHLLF
Trigger: AAAAAGGAGATGTTGGCTTCATGGGTCCCCGGGGCC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGACCTCGCGGAAATTaGTGCGGCCAATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGPRGN*CGQWMR
Trigger: CCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGCCCTTCGAGAAAGCTaGGGACCTCGCGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLALRES*GPRGNC
Trigger: GCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGACCCTGTGCACTGGCTaGTCCAGAGAAAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTTLCTG*SRERQH
Trigger: GTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAAAGCGCACACCCTGTaGACTGGCTGCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCKAHTL*TGCSRE
Trigger: TTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCTCTCAAGGATTGGCTaGTTGGCTCAGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTALSRIG*LAQTAP
Trigger: TGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCACAGCCTCCCCGATaGTGTTGGCGTAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSQPPR*CWRRGQ
Trigger: TTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCAGGGCCCTCCTCTCTaGCTCGCAGTACCGACACAG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAQGPPL*LAVPTQ
Trigger: CTGTGTCGGTACTGCGAGGCAGAGAGGAGGGCCCTG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCTGAGTAGTGAAGGATaGCTGACACAGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCLSSEG*LTQGCG
Trigger: GCCACAGCCCTGTGTCAGGCATCCTTCACTACTCAG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGTCACCTGGGGGTCCTaGTCTGCCAGTAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTVTWGS*SASKAN
Trigger: ATTGGCCTTACTGGCAGAGCAGGACCCCCAGGTGAC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTCACCTGGGGGTCCTaGTCTGCCAGTAAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRVTWGS*SASKAN
Trigger: ATTGGCCTTACTGGCAGAGCAGGACCCCCAGGTGAC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAGGAGGGCCATCTCTaGCCTGTTCTCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLQEGHL*PVLHVL
Trigger: GAGAACGTGGAGAACAGGGCAGAGATGGCCCTCCTG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCAGGCTCTCCCTTGCTaGCCTTGTCACCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAQALPC*PCHQGP
Trigger: GGGACCCTGGTGACAAGGGCAGCAAGGGAGAGCCTG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACACCAGGGATCCCTGCTaGACCAGGTTGACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHTRDPC*TRLTLG
Trigger: CCCCAGGGTCAACCTGGTGCAGCAGGGATCCCTGGT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGTCATCCTCCGTCAGTaGAGCTTCTCCCTTCTCGCC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTVILRQ*SFSLLA
Trigger: GGCGAGAAGGGAGAAGCTGCACTGACGGAGGATGAC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGTCATCCTCCGTCAGTaGAGCTTCTCCCTTCTCGCC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRVILRQ*SFSLLA
Trigger: GGCGAGAAGGGAGAAGCTGCACTGACGGAGGATGAC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGCACACCCTGTGCACTaGCTGCTCCAGAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRAHPVH*LLQRKA
Trigger: TGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCGCTGTACTGCACTGTaGCAAAGCGCACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLRCTAL*QSAHPV
Trigger: CACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGCCGAACTCTGTCCGTaGGTCATCGCTGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRAELCP*VIAVLH
Trigger: GTGCAGTACAGCGATGACCCACGGACAGAGTTCGGC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCCGAACTCTGTCCGTaGGTCATCGCTGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTAELCP*VIAVLH
Trigger: GTGCAGTACAGCGATGACCCACGGACAGAGTTCGGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACATGGTCAGCCACATaGAGAATTGCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATWSAT*RIAAPV
Trigger: CACAGGGGCTGCAATTCTCCATGTGGCTGACCATGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGTGTCCACCAGGTCCTaGGACTTCCCGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTVSTRS*DFPSVI
Trigger: GATCACAGACGGGAAGTCCCAGGACCTGGTGGACAC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCAAGGATTGGCTGCTTaGCTCAGACAGCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCQGLAA*LRQHQV
Trigger: GACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCCTCCCCGATGCTGTTaGCGTAGAGGGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIPPRCC*RRGQSQ
Trigger: CTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCCACCAGGAGGCTGTaGGCTGTGGTATTCTGGATG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTATRRL*AVVFWM
Trigger: CATCCAGAATACCACAGCCCACAGCCTCCTGGTGGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCCACCAGGAGGCTGTaGGCTGTGGTATTCTGGATG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLATRRL*AVVFWM
Trigger: CATCCAGAATACCACAGCCCACAGCCTCCTGGTGGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATACCACCTTCTGCGGTaGCTCCAAGCCAGTCTCACG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSYHLLR*LQASLT
Trigger: CGTGAGACTGGCTTGGAGCCACCGCAGAAGGTGGTA...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCCCGGGCAGCTCGGTaGCTTGCAGGTCTGTTACAG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHARAAR*LAGLLQ
Trigger: CTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCAGCCACCTGGTAGGTaGTTCCAGGCTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAQPPGR*FQAAAL
Trigger: CAGGGCTGCAGCCTGGAACCACCTACCAGGTGGCTG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCAGCCACCTGGTAGGTaGTTCCAGGCTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHQPPGR*FQAAAL
Trigger: CAGGGCTGCAGCCTGGAACCACCTACCAGGTGGCTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACATGGACCGTCCTCACTaGGCCCAGTGGGTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHMDRPH*AQWVRS
Trigger: CGAACGGACCCACTGGGCCCAGTGAGGACGGTCCAT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCAAACCCTGTATCCTGTaGCGCCAGGAACCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIKPCIL*RQEPWS
Trigger: GGACCAGGGTTCCTGGCGCCACAGGATACAGGGTTT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAAACCCTGTATCCTGTaGCGCCAGGAACCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTKPCIL*RQEPWS
Trigger: GGACCAGGGTTCCTGGCGCCACAGGATACAGGGTTT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGATTTCTCTGGGCCGTaGGCTGAGTGCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIDFSGP*AECQET
Trigger: GGTTTCCTGGCACTCAGCCCACGGCCCAGAGAAATC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGTATCTGGTGCCTCATaGGGCCGCCTTCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHVSGAS*GRLHSG
Trigger: GCCGGAGTGAAGGCGGCCCCATGAGGCACCAGATAC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTTTCCTGGGAGTATCTaGTGCCTCATGGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRFPGSI*CLMGPP
Trigger: AGGCGGCCCCATGAGGCACCAGATACTCCCAGGAAA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACACCCGGGACTGTTCCTaGCCACCCTCAGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHTRDCS*PPSGCQ
Trigger: CTGGCAACCTGAGGGTGGCCAGGAACAGTCCCGGGT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTGTAGCTGGATGCCCTaGACACTGGAGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLCSWMP*TLESRP
Trigger: TGGCCTGGACTCCAGTGTCCAGGGCATCCAGCTACA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCAGGATAGGATGTAGCTaGATGCCCTGGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTARIGCS*MPWTLE
Trigger: CTCCAGTGTCCAGGGCATCCAGCTACATCCTATCCT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCCACGGGGGCACACTaGCGTCTGTGTGACAGATGC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHATGAH*RLCDRC
Trigger: GCATCTGTCACACAGACGCCAGTGTGCCCCCGTGGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGACGGCGAAGAAGGTCTaGACAGAGTCCATACCCGGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTTAKKV*TESIPG
Trigger: GCCGGGTATGGACTCTGTCCAGACCTTCTTCGCCGT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCACGGCGAAGAAGGTCTaGACAGAGTCCATACCCGGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRTAKKV*TESIPG
Trigger: GCCGGGTATGGACTCTGTCCAGACCTTCTTCGCCGT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTGGGCAGGGCTCTaGCCGGGGCTGAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAHWAGL*PGLSSE
Trigger: TTCACTACTCAGCCCCGGCCAGAGCCCTGCCCAGTG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCACTGGGCAGGGCTCTaGCCGGGGCTGAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHHWAGL*PGLSSE
Trigger: TTCACTACTCAGCCCCGGCCAGAGCCCTGCCCAGTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCCCTTCTGGCCCTTTaGACAATACACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPLLAL*TIHWAG
Trigger: CCCTGCCCAGTGTATTGTCCAAAGGGCCAGAAGGGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCCCTTCTGGCCCTTTaGACAATACACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRPLLAL*TIHWAG
Trigger: CCCTGCCCAGTGTATTGTCCAAAGGGCCAGAAGGGG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAATGCCACCTTCACCTaGTCCAGGGGGACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHNATFT*SRGTPL
Trigger: GAGCGGGGTCCCCCTGGACCAGGTGAAGGTGGCATT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTTGTCCTGGGAGGCCTaGAGCTCCATCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHILSWEA*SSILRV
Trigger: GACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTAGGCCTGGAGGCCCCTaGGGTCCAAGGATACCAGGA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHARPGGP*GPRIPG
Trigger: TCCTGGTATCCTTGGACCCCAGGGGCCTCCAGGCCT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCCTTTGGGACCTTaGTCACCATTGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSPLGP*SPLLPG
Trigger: GCCGGGCAGCAATGGTGACCAAGGTCCCAAAGGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTTGTCCAGGCAAACCTaGAGACCCCTGTGGACCCAC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLSRQT*RPLWTH
Trigger: GTGGGTCCACAGGGGTCTCCAGGTTTGCCTGGACAA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGATTTCCACTGGGGCCTaGGAAGCCCCCAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTISTGA*EAPNSW
Trigger: CCAGGAATTGGGGGCTTCCCAGGCCCCAGTGGAAAT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAGCACAGGCACAGCATaGAGCTGGGAGCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSTGTA*SWEPAV
Trigger: CACTGCCGGCTCCCAGCTCCATGCTGTGCCTGTGCT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGGGTCCCAAAACGGTTaGCATTCCCTCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSGSQNG*HSLHSH
Trigger: GTGGCTGTGGAGGGAATGCCAACCGTTTTGGGACCC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGGTCCCAAAACGGTTaGCATTCCCTCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGSQNG*HSLHSH
Trigger: GTGGCTGTGGAGGGAATGCCAACCGTTTTGGGACCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCTGGGCCTCAGTCCTaGGCAGTACCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASGPQS*AVPVPW
Trigger: CCAGGGGACAGGTACTGCCCAGGACTGAGGCCCAGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCACAGCAAATAGCTTaGCCCCCTGCCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPQQIA*PPAPSA
Trigger: GGCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGTGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGTCACTGGTGGGCTGTaGGGCAACTCGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHVTGGL*GNSLQL
Trigger: GAGCTGAAGCGAGTTGCCTCACAGCCCACCAGTGAC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCAGAGTGTAGAGTGTaGGGCGGTACTCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHAECRV*GGTQCP
Trigger: CGGGCACTGAGTACCGCCTCACACTCTACACTCTGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAAGTCGAATGCTGTCTaGCTCCCAGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTKSNAV*LPGSTR
Trigger: CCTGGTGCTTCCTGGGAGTCAGACAGCATTCGACTT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAAAGTCGAATGCTGTCTaGCTCCCAGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSKSNAV*LPGSTR
Trigger: CCTGGTGCTTCCTGGGAGTCAGACAGCATTCGACTT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGGTAATGGTGACAGATaGGCTGCTGGCCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIGNGDR*AAGLSH
Trigger: GTGACTCAGGCCAGCAGCTCATCTGTCACCATTACC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGGTAATGGTGACAGATaGGCTGCTGGCCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSGNGDR*AAGLSH
Trigger: GTGACTCAGGCCAGCAGCTCATCTGTCACCATTACC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTGCAGTCACTCGCACTaGGTAGCTGACTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLCSHSH*VADSTF
Trigger: GAAGGTGGAGTCAGCTACTCAGTGCGAGTGACTGCA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGCCAACATGTATCTGTaGGCTGTGACCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLANMYL*AVTTAV
Trigger: CACAGCCGTGGTCACAGCTCACAGATACATGTTGGC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGCCAACATGTATCTGTaGGCTGTGACCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTANMYL*AVTTAV
Trigger: CACAGCCGTGGTCACAGCTCACAGATACATGTTGGC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCTCACGGATGGGGCTaGATATGTCACCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPHGWG*ICHLSR
Trigger: CCTTGAGAGGTGACATATTCAGCCCCATCCGTGAGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCCCAGAGGCGCCTaGATCTCCTTTCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSPRGA*ISFLSL
Trigger: AAGGGAGAGAAAGGAGATTCAGGCGCCTCTGGGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAAAGCGCACACCCTGTaGACTGGCTGCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTKAHTL*TGCSRE
Trigger: TTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGGGTCATCGCTGTACTaGACTGTGGCAAAGCGCACA +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLGSSLY*TVAKRT
Trigger: TGTGCGCTTTGCCACAGTGCAGTACAGCGATGACCC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCACCTCATAGTCCGTaGCAGGCTCCAAGTCACGCA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSPHSP*QAPSHA
Trigger: TGCGTGACTTGGAGCCTGGCACGGACTATGAGGTGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACAACAGAAGCGTCAGTaGGAGCCATCAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTQQKRQ*EPSGKW
Trigger: CCACTTCCCTGATGGCTCGCACTGACGCTTCTGTTG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGGCAGTACCACCTTCTaGGGTGGCTCCAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHGSTTF*GGSKPV
Trigger: GACTGGCTTGGAGCCACCGCAGAAGGTGGTACTGCC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGGCCGTGGGCTGAGTaGCAGGAAACCCTGTATCCT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGPWAE*QETLYP
Trigger: AGGATACAGGGTTTCCTGGCACTCAGCCCACGGCCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGAAGCATTGAGGATCTaGAGCCTCGACACACGACCC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTEALRI*SLDTRP
Trigger: GGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGAGACCCCGGATCTCTaGAGAGTCTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSETPDL*RVCVSW
Trigger: CCAGGAAACACAGACTCTGCAGAGATCCGGGGTCTC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGAGACCCCGGATCTCTaGAGAGTCTGTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLETPDL*RVCVSW
Trigger: CCAGGAAACACAGACTCTGCAGAGATCCGGGGTCTC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTGGCCACCCTCAGGTTaGCAGTGCAGAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHWPPSG*QCRRKP
Trigger: GGGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCACGAGGTGACTCAGTaGGCGCAGTCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHHEVTQ*AQSPLQ
Trigger: CTGCAGAGGTGACTGCGCGCACTGAGTCACCTCGTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCTGAGTAGTGAAGGATaGCTGACACAGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRLSSEG*LTQGCG
Trigger: GCCACAGCCCTGTGTCAGGCATCCTTCACTACTCAG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCCGAAACCCTTCAATaGCCCTTTCCCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPETLQ*PFPQGL
Trigger: GAGCCCCTGGGGAAAGGGGCATTGAAGGGTTTCGGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACATTCAGGCCAGGTTTaGCATCCTCGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSHSGQV*HPRLAF
Trigger: GAAAGCCAGGCGAGGATGGCAAACCTGGCCTGAATG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCATTCAGGCCAGGTTTaGCATCCTCGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLHSGQV*HPRLAF
Trigger: GAAAGCCAGGCGAGGATGGCAAACCTGGCCTGAATG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCCCTTCTCTCCCTTTaGTCCAGGGAGCCCGACCAC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSLLSL*SREPDH
Trigger: GTGGTCGGGCTCCCTGGAGCAAAGGGAGAGAAGGGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGCAGGGTGTAGGCAGTaGAGGAGCCCTCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHAGCRQ*RSPHPV
Trigger: CACTGGATGAGGGCTCCTGCACTGCCTACACCCTGC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACATGGTCAGCCACATaGAGAATTGCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTWSAT*RIAAPV
Trigger: CACAGGGGCTGCAATTCTCCATGTGGCTGACCATGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAAGGATTGGCTGCTTaGCTCAGACAGCACCAGGTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRQGLAA*LRQHQV
Trigger: GACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCAGTCACAGGGCCACTaGCCGCTGTCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHQSQGH*PLSTVL
Trigger: GAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACACTGGTCTCACCAGCTaGGACGTTCACCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHTGLTS*DVHLLP
Trigger: CGGCAGGAGGTGAACGTCCCAGCTGGTGAGACCAGT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACTGGTCTCACCAGCTaGGACGTTCACCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATGLTS*DVHLLP
Trigger: CGGCAGGAGGTGAACGTCCCAGCTGGTGAGACCAGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAGCAATCACAGTCACTTaGTACTCGGTCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSAITVT*YSVSGR
Trigger: CCGGCCACTGACCGAGTACCAAGTGACTGTGATTGC...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGGAGGCTGTGGGCTGTaGTATTCTGGATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCGGCGL*YSGWSV
Trigger: AACTGACCATCCAGAATACCACAGCCCACAGCCTCC...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACACAACCCGCAGCCCTaGAACAGCAAGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSHNPQP*NSKWSF
Trigger: GAAACTCCACTTGCTGTTCCAGGGCTGCGGGTTGTG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCACAACCCGCAGCCCTaGAACAGCAAGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIHNPQP*NSKWSF
Trigger: GAAACTCCACTTGCTGTTCCAGGGCTGCGGGTTGTG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCCCCAGAAACCAACTaGGATTTCTCTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSPETN*DFSGPW
Trigger: CCACGGCCCAGAGAAATCCCAGTTGGTTTCTGGGGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCATTCAGTGGGAACAGTaGGGAGGGCCGATGACTGTA +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCIQWEQ*GGPMTV
Trigger: TACAGTCATCGGCCCTCCCCACTGTTCCCACTGAAT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCGCCCAGGAGCATCTaGTGCCAACATGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLAPRSI*CQHVSV
Trigger: CACAGATACATGTTGGCACCAGATGCTCCTGGGCGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCGCCCAGGAGCATCTaGTGCCAACATGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLAPRSI*CQHVSV
Trigger: CACAGATACATGTTGGCACCAGATGCTCCTGGGCGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTTAAGCCCAGAAGCCTaGGCCTCACGGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHALSPEA*ASRMGL
Trigger: CAGCCCCATCCGTGAGGCCCAGGCTTCTGGGCTTAA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTGCCTGGTCCAGGCTTaGCCCATCATCCACGGCGAA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHCLVQA*PIIHGE
Trigger: TTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCTTTGGACAATACACTaGGCAGGGCTCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHLWTIH*AGLWPG
Trigger: CCCCGGCCAGAGCCCTGCCCAGTGTATTGTCCAAAG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCAGGTTCCCCCTTCTaGCCCTTTGGACAATACACT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCPGSPF*PFGQYT
Trigger: AGTGTATTGTCCAAAGGGCCAGAAGGGGGAACCTGG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCCCTTCAGGACCCTTaGCTCCAGGACGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHALQDP*LQDVQQ
Trigger: TTGCTGGACGTCCTGGAGCCAAGGGTCCTGAAGGGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCTCCACGCTCACCCTTaGGGCCATCACGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHLHAHP*GHHDLL
Trigger: GAGAAGGTCGTGATGGCCCCAAGGGTGAGCGTGGAG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCACTCCATCCTTTCCTaGGGATCCCGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHHSILS*GSRVTR
Trigger: CCTGGTGACCCGGGATCCCCAGGAAAGGATGGAGTG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTGGCAGGAGCCACAATaGGGGTTTGTCCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHWQEPQ*GFVHRG
Trigger: CCCCCTGTGGACAAACCCCCATTGTGGCTCCTGCCA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATGTCATCACAGGCTTaGGTCAAGGGGCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLMSSQA*VKGRVR
Trigger: TCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGATGTCATCACAGGCTTaGGTCAAGGGGCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLMSSQA*VKGRVR
Trigger: TCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCGTCGCTGGAAGCATTaGGGATCTGCAGCCTCGACA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHRRWKH*GSAAST
Trigger: TGTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGGCCCCGGGGACCCATaGAGCCAACATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHGPGDP*SQHLLF
Trigger: AAAAAGGAGATGTTGGCTTCATGGGTCCCCGGGGCC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACGGGACCAAGTCACTaGAATAACGGACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTGPSH*NNGRAH
Trigger: GTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCTCGCGGAAATTGCTaGGGCCAATGGATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPRGNC*GQWMRS
Trigger: GCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGGACCTCGCGGAAATTaGTGCGGCCAATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHGPRGN*CGQWMR
Trigger: CCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACCCCCAGAGCCAAGTaGATCCAGGCCGAACTCTGT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATPRAK*IQAELC
Trigger: ACAGAGTTCGGCCTGGATGCACTTGGCTCTGGGGGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCAGCCACATGGAGAATTaGAGCCCCTGTGCGAGTGTT +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHISHMEN*SPCASV
Trigger: AACACTCGCACAGGGGCTGCAATTCTCCATGTGGCT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTCTCAAGGATTGGCTaGTTGGCTCAGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLSRIG*LAQTAP
Trigger: TGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCACAGCCTCCCCGATaGTGTTGGCGTAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASQPPR*CWRRGQ
Trigger: TTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTGCGGCCAAATAGGGTaGTCACGGTCACCTCATAGT +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLCGQIG*SRSPHS
Trigger: ACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCCAGGAGCATCTGGTaGCAACATGTATCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPRSIW*QHVSVS
Trigger: GCTCACAGATACATGTTGGCACCAGATGCTCCTGGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCCAGGAGCATCTGGTaGCAACATGTATCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLPRSIW*QHVSVS
Trigger: GCTCACAGATACATGTTGGCACCAGATGCTCCTGGG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCACACCCTGTGCACTaGCTGCTCCAGAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHAHPVH*LLQRKA
Trigger: TGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAGAAGAAGTCACTGGTaGGCTGTGAGGCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTRRSHW*AVRQLA
Trigger: AGCGAGTTGCCTCACAGCCCACCAGTGACTTCTTCT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAGAAGAAGTCACTGGTaGGCTGTGAGGCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLRRSHW*AVRQLA
Trigger: AGCGAGTTGCCTCACAGCCCACCAGTGACTTCTTCT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGAGGCTGTGGGCTGTaGTATTCTGGATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGGCGL*YSGWSV
Trigger: AACTGACCATCCAGAATACCACAGCCCACAGCCTCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACAATGATGCGGTACTaGGTGGCACCAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATMMRY*VAPGTG
Trigger: CCCAGTCCCTGGTGCCACCCAGTACCGCATCATTGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACACAATGATGCGGTACTaGGTGGCACCAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHTMMRY*VAPGTG
Trigger: CCCAGTCCCTGGTGCCACCCAGTACCGCATCATTGT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTGTGGCAGTAGAGTCTaGGGGCAGTGTCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHACGSRV*GQCLAG
Trigger: TCCAGCCAGACACTGCCCCCAGACTCTACTGCCACA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCGTATACTCAGTATCTaGCTCCAGTCCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCRILSI*LQSIQL
Trigger: GAGCTGGATGGACTGGAGCCAGATACTGAGTATACG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTGTAGCTGGATGCCCTaGACACTGGAGTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHACSWMP*TLESRP
Trigger: TGGCCTGGACTCCAGTGTCCAGGGCATCCAGCTACA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAGGATAGGATGTAGCTaGATGCCCTGGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLRIGCS*MPWTLE
Trigger: CTCCAGTGTCCAGGGCATCCAGCTACATCCTATCCT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGGTTGTTCCCACTTaGGTCCATGTAGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRQVVPT*VHVGHV
Trigger: GACATGCCCTACATGGACCCAAGTGGGAACAACCTG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCAGGTTGTTCCCACTTaGGTCCATGTAGGGCATGTC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIQVVPT*VHVGHV
Trigger: GACATGCCCTACATGGACCCAAGTGGGAACAACCTG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACAGACCACTGACTGCCTaGTCCAGGCTTGGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHRPLTA*SRLGPS
Trigger: TGATGGGCCAAGCCTGGACCAGGCAGTCAGTGGTCT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTTGTCCTGGGAGGCCTaGAGCTCCATCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHALSWEA*SSILRV
Trigger: GACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTCCCTTTTCTCCTTTaGGTCCAGCAACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLPFLL*VQQQQV
Trigger: GACCTGCTGTTGCTGGACCCAAAGGAGAAAAGGGAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCCTTTTCTCCTTTaGGTCCAGCAACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLPFLL*VQQQQV
Trigger: GACCTGCTGTTGCTGGACCCAAAGGAGAAAAGGGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCTCCAGGATCTCCCTaGTCTCCCTTTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPGSP*SPFSPT
Trigger: TGTGGGTGAAAAGGGAGACCAGGGAGATCCTGGAGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTCTCCAGGATCTCCCTaGTCTCCCTTTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTSPGSP*SPFSPT
Trigger: TGTGGGTGAAAAGGGAGACCAGGGAGATCCTGGAGA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAGAGAGTCCAGGACCTaGCTCATCCACAGACACCTT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTRESRT*LIHRHL
Trigger: AAGGTGTCTGTGGATGAGCCAGGTCCTGGACTCTCT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCTCCTTTGGGACCTTaGTCACCATTGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPLGP*SPLLPG
Trigger: GCCGGGCAGCAATGGTGACCAAGGTCCCAAAGGAGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGTCTCCTTTGATGCCTaGCACACCCCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLVSFDA*HTPVSF
Trigger: AAAGGAGACAGGGGTGTGCCAGGCATCAAAGGAGAC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGAAACCTTTGGGTCCTaGAGCCCCTTTCTGACCATC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLETFGS*SPFLTI
Trigger: GATGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGAAACCTTTGGGTCCTaGAGCCCCTTTCTGACCATC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIETFGS*SPFLTI
Trigger: GATGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACATTTCCACTGGGGCCTaGGAAGCCCCCAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHISTGA*EAPNSW
Trigger: CCAGGAATTGGGGGCTTCCCAGGCCCCAGTGGAAAT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGGAGCTTCAGGGTCCTaGTACTCCTCCACAGAATAC +
Preference number: 4 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTGASGS*YSSTEY
Trigger: GTATTCTGTGGAGGAGTACCAGGACCCTGAAGCTCC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGAGCTTCAGGGTCCTaGTACTCCTCCACAGAATAC +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGASGS*YSSTEY
Trigger: GTATTCTGTGGAGGAGTACCAGGACCCTGAAGCTCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGTCTCAGCTCATTATCTaGGCCTCAGTCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTSQLII*ASVLGS
Trigger: ACTGCCCAGGACTGAGGCCCAGATAATGAGCTGAGA...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCAGCTCATTATCTaGGCCTCAGTCCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSQLII*ASVLGS
Trigger: ACTGCCCAGGACTGAGGCCCAGATAATGAGCTGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCTCCCAGAGGCGCCTaGATCTCCTTTCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSPRGA*ISFLSL
Trigger: AAGGGAGAGAAAGGAGATTCAGGCGCCTCTGGGAGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACAATAGCTTGACCCCCTaGCCCTTCAGCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHNSLTP*PFSLWA
Trigger: TGCCCAAAGGCTGAAGGGGCAGGGGGTCAAGCTATT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAATAGCTTGACCCCCTaGCCCTTCAGCCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHNSLTP*PFSLWA
Trigger: TGCCCAAAGGCTGAAGGGGCAGGGGGTCAAGCTATT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCACCTCATAGTCCGTaGCAGGCTCCAAGTCACGCA +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSPHSP*QAPSHA
Trigger: TGCGTGACTTGGAGCCTGGCACGGACTATGAGGTGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCAACAGAAGCGTCAGTaGGAGCCATCAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHQQKRQ*EPSGKW
Trigger: CCACTTCCCTGATGGCTCGCACTGACGCTTCTGTTG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGGTCATCCAAGTCGAATaGTGTCTGACTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLVIQVE*CLTPRK
Trigger: CTTCCTGGGAGTCAGACAGCATTCGACTTGGATGAC...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACATGGGCCCTCACATaGACCGTATACTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTWALT*TVYSVS
Trigger: AGATACTGAGTATACGGTGCATGTGAGGGCCCATGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGAAGCATTGAGGATCTaGAGCCTCGACACACGACCC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHEALRI*SLDTRP
Trigger: GGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAATTGCTGCGGCCAATaGATGAGGAGCCATCCAGTA +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTNCCGQ*MRSHPV
Trigger: TACTGGATGGCTCCTCATCCATTGGCCGCAGCAATT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATGGGGCAGGAAGACATaGTCAGCCACATGGAGAATT +
Preference number: 4 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSWGRKT*SATWRI
Trigger: AATTCTCCATGTGGCTGACCATGTCTTCCTGCCCCA...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAGAAGAAGAAGTCACTaGTGGGCTGTGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRRRRSH*WAVRQL
Trigger: GAGTTGCCTCACAGCCCACCAGTGACTTCTTCTTCT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAGAAGAAGAAGTCACTaGTGGGCTGTGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLRRRSH*WAVRQL
Trigger: GAGTTGCCTCACAGCCCACCAGTGACTTCTTCTTCT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTGTACTCTCAAGGATTaGCTGCTTGGCTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRCTLKD*LLGSDS
Trigger: GCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCTGTGGTATTCTGGATaGTCAGTTCCGGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRLWYSG*SVPALL
Trigger: TAGAAGGGCCGGAACTGACCATCCAGAATACCACAG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCCCCAGAAACCAACTaGGATTTCTCTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSPETN*DFSGPW
Trigger: CCACGGCCCAGAGAAATCCCAGTTGGTTTCTGGGGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGTATACTCAGTATCTaGCTCCAGTCCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRRILSI*LQSIQL
Trigger: GAGCTGGATGGACTGGAGCCAGATACTGAGTATACG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACACGGGACCAAGTCACTaGAATAACGGACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHTGPSH*NNGRAH
Trigger: GTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAGCCACATGGAGAATTaGAGCCCCTGTGCGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSHMEN*SPCASV
Trigger: AACACTCGCACAGGGGCTGCAATTCTCCATGTGGCT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAGAGTCTGTGTTTCCTaGGAGTATCTGGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTRVCVS*EYLVPH
Trigger: ATGAGGCACCAGATACTCCCAGGAAACACAGACTCT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGAGCATTGTCTTGAGTaGCATGTGGTAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: PRISTMSSQAWVKGRVRREHCLE*HVVGTP
Trigger: TGGTGTTCCTACCACATGCCACTCAAGACAATGCTC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGAGCATTGTCTTGAGTaGCATGTGGTAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLEHCLE*HVVGTP
Trigger: TGGTGTTCCTACCACATGCCACTCAAGACAATGCTC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACATTCAGTGGGAACAGTaGGGAGGGCCGATGACTGTA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHIQWEQ*GGPMTV
Trigger: TACAGTCATCGGCCCTCCCCACTGTTCCCACTGAAT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCATAATGCCAAGGTCATaGGAGCCATTCAGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: APCHHRLGSRGGSDASHIIMPRS*EPFSGN
Trigger: GTTCCCACTGAATGGCTCCCATGACCTTGGCATTAT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGATAATGCCAAGGTCATaGGAGCCATTCAGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLIMPRS*EPFSGN
Trigger: GTTCCCACTGAATGGCTCCCATGACCTTGGCATTAT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCAGGTTCCCCCTTCTaGCCCTTTGGACAATACACT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPGSPF*PFGQYT
Trigger: AGTGTATTGTCCAAAGGGCCAGAAGGGGGAACCTGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTAGAGAGTCCAGGACCTaGCTCATCCACAGACACCTT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHARESRT*LIHRHL
Trigger: AAGGTGTCTGTGGATGAGCCAGGTCCTGGACTCTCT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGTCTCCTTTGATGCCTaGCACACCCCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHVSFDA*HTPVSF
Trigger: AAAGGAGACAGGGGTGTGCCAGGCATCAAAGGAGAC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR TCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCAGGGTCAGCATTCTTaGTCCCCACAGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHQGQHS*SPQQIA
Trigger: AGCTATTTGCTGTGGGGATCAAGAATGCTGACCCTG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGTCATCCAAGTCGAATaGTGTCTGACTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHVIQVE*CLTPRK
Trigger: CTTCCTGGGAGTCAGACAGCATTCGACTTGGATGAC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTAATTGCTGCGGCCAATaGATGAGGAGCCATCCAGTA +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHANCCGQ*MRSHPV
Trigger: TACTGGATGGCTCCTCATCCATTGGCCGCAGCAATT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTGGGGCAGGAAGACATaGTCAGCCACATGGAGAATT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHWGRKT*SATWRI
Trigger: AATTCTCCATGTGGCTGACCATGTCTTCCTGCCCCA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTGTACTCTCAAGGATTaGCTGCTTGGCTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHACTLKD*LLGSDS
Trigger: GCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCTGTGGTATTCTGGATaGTCAGTTCCGGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHLWYSG*SVPALL
Trigger: TAGAAGGGCCGGAACTGACCATCCAGAATACCACAG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR GCA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACATGGGCCCTCACATaGACCGTATACTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATWALT*TVYSVS
Trigger: AGATACTGAGTATACGGTGCATGTGAGGGCCCATGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CCA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAGAGTCTGTGTTTCCTaGGAGTATCTGGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHRVCVS*EYLVPH
Trigger: ATGAGGCACCAGATACTCCCAGGAAACACAGACTCT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GGCTCCCAGCGCAGCCTCAGCGAGTGCTCCCCGCGCTGCACCACGTaGAGCGTCCCCAGGGCTGGCGGAGCCTCAGGCGGCGTAGTGACA +
Preference number: 5 (lower is better)
Translates to: GSQRSLSECSPRCTT*SVPRAGGASGGVVT
Trigger: TGTCACTACGCCGCCTGAGGCTCCGCCAGCCCTGGGGACGCTTCACGTGGTGCAGCGCGGGGAGCACTCGCTGAGGCTGCGCTGGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GCAGGTCACTCTCTCCCTGTGCTGGGCTCGCACTCGGGGCGCCTCTaGCAGGATCCCGGCGCAGAGCGCGGCCACCAGAAGCCGCAGCGT +
Preference number: 5 (lower is better)
Translates to: AGHSLPVLGSHSGRL*QDPGAERGHQKPQR
Trigger: ACGCTGCGGCTTCTGGTGGCCGCGCTCTGCGCCGGGATCCTGGCAGAGGCGCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGTGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CCTGGCCACCCTCAGGTTGCCAGTGCAGAAGGAAGCCCTGCGCTCTaGGCACCGGCTCCCAGCGCAGCCTCAGCGAGTGCTCCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: PGHPQVASAEGSPAL*APAPSAASASAPRA
Trigger: AGCGCGGGGAGCACTCGCTGAGGCTGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CTGGGTGCTGCGCACAATGATGCGGTACTGGGTGGCACCAGGGACTaGGCTCCAGGACACTCGCACCCGCTGCCCGGGCAGCTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LGAAHNDAVLGGTRD*APGHSHPLPGQLGG
Trigger: GCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGCCACCCAGTACCGCATCATTGTGCGCAGCACCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp CGCGGTACTGTGTCGCTGGCTCCAGCCCGTCCAGGTGATAGCTGCTaGGCTCGGGCCCCAGGACCCGGGACTGTTCCTGGCCACCCTCAG +
Preference number: 5 (lower is better)
Translates to: RGTVSLAPARPGDSC*ARAPGPGTVPGHPQ
Trigger: CTGAGGGTGGCCAGGAACAGTCCCGGGTCCTGGGGCCCGAGCTCAGCAGCTATCACCTGGACGGGCTGGAGCCAGCGACACAGTACCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCCCCCCGGCTCCCCCTTaGGGCCTCGAGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAPPAPP*GLEVLA
Trigger: AGCGAGGACCTCGAGGCCCAAAGGGGGAGCCGGGGG...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GGGCTCCAGGACACTCGCACCCGCTGCCCGGGCAGCTCGGTGGCTTaGAGGTCTGTTACAGGGCTCACAGGCAGCTCTGGTCCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: GLQDTRTRCPGSSVA*RSVTGLTGSSGPVG
Trigger: TCCCACTGGACCAGAGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GACTGTTCCTGGCCACCCTCAGGTTGCCAGTGCAGAAGGAAGCCCTaGGCTCTGGGCACCGGCTCCCAGCGCAGCCTCAGCGAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: DCSWPPSGCQCRRKP*ALGTGSQRSLSECS
Trigger: GGAGCACTCGCTGAGGCTGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCAGGAACAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp GGACTGGGCTCCAGGACACTCGCACCCGCTGCCCGGGCAGCTCGGTaGCTTGCAGGTCTGTTACAGGGCTCACAGGCAGCTCTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GLGSRTLAPAARAAR*LAGLLQGSQAALVQ
Trigger: CTGGACCAGAGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCCCGCCTCTGTCCCTaGCTCCCCCGTGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPRLCP*LPRGLG
Trigger: GCCAAGGCCACGGGGGAGCAAGGGACAGAGGCGGGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328333.12
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCCCTCGAGGACCCTCTaGTCCGCGGTCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCPSRTL*SAVPRL
Trigger: GAGCCTGGGGACCGCGGACAAGAGGGTCCTCGAGGG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTCACCCATGTCCCCCTaGGCACCCCGTGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASPMSP*APRGPG
Trigger: TCCAGGCCCACGGGGTGCCAAGGGGGACATGGGTGA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACCGATCAGGCCCTCCTaGCCAGGGGCCCCCGACTGG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTPIRPS*PGAPDW
Trigger: CCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCGG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGATCAGGCCCTCCTaGCCAGGGGCCCCCGACTGG +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTPIRPS*PGAPDW
Trigger: CCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCGG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GGCTCCAGGGACGGGTCCCCAGGCCACCCTCACTCGCGTTGCATCTaGCACCACAACCCGCAGCCCTGGAACAGCAAGTGGAGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: GSRDGSPGHPHSRCI*HHNPQPWNSKWSFR
Trigger: CCGGAAACTCCACTTGCTGTTCCAGGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGGCCTGGGGACCCGTCCCTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GGGATGAAGGGAGTTCGGCTGTGGAGTAAGACATACGTACCCGGATaGCTGGCTCCCCACGCTCGCCTCGGGGCCCAGGCAGCCCTACTC +
Preference number: 5 (lower is better)
Translates to: GMKGVRLWSKTYVPG*LAPHARLGAQAALL
Trigger: GAGTAGGGCTGCCTGGGCCCCGAGGCGAGCGTGGGGAGCCAGGCATCCGGGTACGTATGTCTTACTCCACAGCCGAACTCCCTTCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS CCA 90 bp TCACTTGGTACTCGGTCAGTGGCCGGAGACCCCGCAGCCGCACACTaGTCTCACCAGCTGGGACGTTCACCTCCTGCCGCTCACTCGGCA +
Preference number: 5 (lower is better)
Translates to: SLGTRSVAGDPAAAH*SHQLGRSPPAAHSA
Trigger: TGCCGAGTGAGCGGCAGGAGGTGAACGTCCCAGCTGGTGAGACCAGTGTGCGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CACTCCGCCAGGCCACCAGGAGGCTGTGGGCTGTGGTATTCTGGATaGTCAGTTCCGGCCCTTCTAGGGCAGTGGTCCGAGCTGTCCCGC +
Preference number: 5 (lower is better)
Translates to: HSARPPGGCGLWYSG*SVPALLGQWSELSR
Trigger: GCGGGACAGCTCGGACCACTGCCCTAGAAGGGCCGGAACTGACCATCCAGAATACCACAGCCCACAGCCTCCTGGTGGCCTGGCGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CCCACCACTGAGGACCCGCCATGTCACACGGTAGCCAGTGGCACCTaGCACACTCCGCCAGGCCACCAGGAGGCTGTGGGCTGTGGTATT +
Preference number: 5 (lower is better)
Translates to: PTTEDPPCHTVASGT*HTPPGHQEAVGCGI
Trigger: AATACCACAGCCCACAGCCTCCTGGTGGCCTGGCGGAGTGTGCCAGGTGCCACTGGCTACCGTGTGACATGGCGGGTCCTCAGTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTGGGCCCCGTTCCCCTaGGACTCCGGTAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTAWAPFP*DSGSSS
Trigger: AGAGGAGCTACCGGAGTCCAAGGGGAACGGGGCCCA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCCTCGAGGACCCTCTaGTCCGCGGTCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPSRTL*SAVPRL
Trigger: GAGCCTGGGGACCGCGGACAAGAGGGTCCTCGAGGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCAGGCCAGGATCACCCTaGGGCCCTCGAGGACCCTCT +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTARPGSP*GPRGPS
Trigger: AGAGGGTCCTCGAGGGCCCAAGGGTGATCCTGGCCT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCGCCTGAGTCCCCCTaGGGGCCTCGACGCCGTTCG +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPESP*GPRRRS
Trigger: CGAACGGCGTCGAGGCCCCAAGGGGGACTCAGGCGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTCGCCCTGGTCACCCTaGGGGCCTGGCTGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLSPWSP*GPGCPS
Trigger: TGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCGA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCGCCCTGGTCACCCTaGGGGCCTGGCTGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPWSP*GPGCPS
Trigger: TGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp TTGCAGGGGTGGCCACCTCGTGGCCCTCCAGCAGAGTGTAGAGTGTaGGGCGGTACTCAGTGCCCGGCTGCAGCCCATCCAACTGGTAGC +
Preference number: 5 (lower is better)
Translates to: LQGWPPRGPPAECRV*GGTQCPAAAHPTGS
Trigger: GCTACCAGTTGGATGGGCTGCAGCCGGGCACTGAGTACCGCCTCACACTCTACACTCTGCTGGAGGGCCACGAGGTGGCCACCCCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GGGCAGTACCTGGTGAGGACAGGTTGGAAACGGTCGTCAGCCATCTaGCCTTCCCCGGAGACGCTCAGGCAGAGGCACCGCCAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GQYLVRTGWKRSSAI*PSPETLRQRHRQGE
Trigger: CTCCCCTTGGCGGTGCCTCTGCCTGAGCGTCTCCGGGGAAGGTCAGATGGCTGACGACCGTTTCCAACCTGTCCTCACCAGGTACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS GCA 90 bp TGCTGCCTGTCACAGCCCGATGGTACCAGCGCAGGGTGTAGGCAGTaGAGGAGCCCTCATCCAGTGGCAGGGAACAGGGGTCTGGGCCAA +
Preference number: 5 (lower is better)
Translates to: CCLSQPDGTSAGCRQ*RSPHPVAGNRGLGQ
Trigger: TTGGCCCAGACCCCTGTTCCCTGCCACTGGATGAGGGCTCCTGCACTGCCTACACCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465238.5
ENST00000470076.1
CDS GCA 90 bp GCTGCTGGCCCCGGGGCAAGGTGGGCAGCACTGATTTCCACTGTGTaGACACAGTGCCCATGCGTGTGCCCTGCATGCAGACCCTACGTG +
Preference number: 5 (lower is better)
Translates to: AAGPGARWAALISTV*TQCPCVCPACRPYV
Trigger: CACGTAGGGTCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAGTGCTGCCCACCTTGCCCCGGGGCCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS CCA 90 bp GGCACACTCCGCCAGGCCACCAGGAGGCTGTGGGCTGTGGTATTCTaGATGGTCAGTTCCGGCCCTTCTAGGGCAGTGGTCCGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GTLRQATRRLWAVVF*MVSSGPSRAVVRAV
Trigger: GACAGCTCGGACCACTGCCCTAGAAGGGCCGGAACTGACCATCCAGAATACCACAGCCCACAGCCTCCTGGTGGCCTGGCGGAGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp ACTGCCTGGTCCAGGCTTGGCCCATCATCCACGGCGAAGAAGGTCTaGACAGAGTCCATACCCGGCGCCAAGCGACGCAGCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TAWSRLGPSSTAKKV*TESIPGAKRRSCSG
Trigger: CCCAGAGCAGCTGCGTCGCTTGGCGCCGGGTATGGACTCTGTCCAGACCTTCTTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTGCTCCCCCGTGGCCTaGGCAGGTCCGAGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHCSPVA*AGPSPA
Trigger: CGCTGGGCTCGGACCTGCCAAGGCCACGGGGGAGCA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328333.12
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAACCCGGAGACCCAGGTaGTCCTGGGAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSTRRPR*SWEAWS
Trigger: GCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCACCCGGAGACCCAGGTaGTCCTGGGAGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHITRRPR*SWEAWS
Trigger: GCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTCCCCACGGTCACCCTaGGGTCCAGATGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASPRSP*GPDDPG
Trigger: CCCTGGATCATCTGGACCCAAGGGTGACCGTGGGGA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCCCCACGGTCACCCTaGGGGCCCGTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPRSP*GPVPPG
Trigger: CCCAGGAGGCACGGGCCCCAAGGGTGACCGTGGGGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTCCCCACGGTCACCCTaGGGGCCCGTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSPRSP*GPVPPG
Trigger: CCCAGGAGGCACGGGCCCCAAGGGTGACCGTGGGGA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCATCCACAGACACCTaGGGGCCAGGGGGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSSTDT*GPGGPG
Trigger: CCCCGGACCCCCTGGCCCCAAGGTGTCTGTGGATGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTCCCCCTTAGCACCCTaGAGTCCAGGGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASPLAP*SPGGPC
Trigger: ACAGGGACCCCCTGGACTCAAGGGTGCTAAGGGGGA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATCACCCATGTCCCCCTaGGCACCCCGTGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSSPMSP*APRGPG
Trigger: TCCAGGCCCACGGGGTGCCAAGGGGGACATGGGTGA...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCCTGCTGCACCAGGTaGACCCTGGGGTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPCCTR*TLGSQE
Trigger: CTCCTGGGACCCCAGGGTCAACCTGGTGCAGCAGGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GAGCCATCAGGGAAGTGGCGGGCCCCACACTGCGGCCAAATAGGGTaGTCACGGTCACCTCATAGTCCGTGCCAGGCTCCAAGTCACGCA +
Preference number: 5 (lower is better)
Translates to: EPSGKWRAPHCGQIG*SRSPHSPCQAPSHA
Trigger: TGCGTGACTTGGAGCCTGGCACGGACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CAGAAGCGTCAGTGCGAGCCATCAGGGAAGTGGCGGGCCCCACACTaGGGCCAAATAGGGTGCTCACGGTCACCTCATAGTCCGTGCCAG +
Preference number: 5 (lower is better)
Translates to: QKRQCEPSGKWRAPH*GQIGCSRSPHSPCQ
Trigger: CTGGCACGGACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTCGCACTGACGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCCGGGGCAAGGTGGGCAGCACTGATTTCCACTGTGTGCACACAGTaGCCATGCGTGTGCCCTGCATGCAGACCCTACGTGCTTGGCGTG +
Preference number: 5 (lower is better)
Translates to: PGARWAALISTVCTQ*PCVCPACRPYVLGV
Trigger: CACGCCAAGCACGTAGGGTCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAGTGCTGCCCACCTTGCCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS GCA 90 bp TCCTGGATGTTGGGACATGCAGCCCGACTCAGGGGCTCAGACATGTaGCCCGGCCCAAGAGTGGCCCCTTATGCCCGCCATCACACTCCT +
Preference number: 5 (lower is better)
Translates to: SWMLGHAARLRGSDM*PGPRVAPYARHHTP
Trigger: AGGAGTGTGATGGCGGGCATAAGGGGCCACTCTTGGGCCGGGGCACATGTCTGAGCCCCTGAGTCGGGCTGCATGTCCCAACATCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS GCA 90 bp GTGGCTCCCTGTGATCCAGAGAGCAGGCTCCTGGATGTTGGGACATaGAGCCCGACTCAGGGGCTCAGACATGTGCCCCGGCCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: VAPCDPESRLLDVGT*SPTQGLRHVPRPKS
Trigger: ACTCTTGGGCCGGGGCACATGTCTGAGCCCCTGAGTCGGGCTGCATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 90 bp GCTGTTGGCGTAGAGGGCAATCACAGTCACTTGGTACTCGGTCAGTaGCCGGAGACCCCGCAGCCGCACACTGGTCTCACCAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: AVGVEGNHSHLVLGQ*PETPQPHTGLTSWD
Trigger: GTCCCAGCTGGTGAGACCAGTGTGCGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp GGGCAGTGGTCCGAGCTGTCCCGCTCACAGCCTCCCCGATGCTGTTaGCGTAGAGGGCAATCACAGTCACTTGGTACTCGGTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GQWSELSRSQPPRCC*RRGQSQSLGTRSVA
Trigger: GGCCACTGACCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGAGCGGGACAGCTCGGACCACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp ATGGTACCAGCGCAGGGTGTAGGCAGTGCAGGAGCCCTCATCCAGTaGCAGGGAACAGGGGTCTGGGCCAATGGGGTCAAGTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: MVPAQGVGSAGALIQ*QGTGVWANGVKSAG
Trigger: CCCTGCTGACTTGACCCCATTGGCCCAGACCCCTGTTCCCTGCCACTGGATGAGGGCTCCTGCACTGCCTACACCCTGCGCTGGTACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465238.5
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCTGCCCCTTCAGCCTTaGGGCAGCTGTGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCLPLQP*GSCVHQ
Trigger: CTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCAG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCAGTGGGAACCACGGTaGCAGGGGTGGCCACCTCGT +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLQWEPR*QGWPPR
Trigger: ACGAGGTGGCCACCCCTGCAACCGTGGTTCCCACTG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCTGCCTGGTCCAGGCTaGGCCCATCATCCACGGCGA +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLLPGPG*AHHPRR
Trigger: TCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTGCCTGGTCCAGGCTaGGCCCATCATCCACGGCGA +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTLPGPG*AHHPRR
Trigger: TCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAG...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGAAGCCCCTCTCGCCCTaGGCAGTGGCACTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLKPLSP*AVALPG
Trigger: CCCTGGAAGTGCCACTGCCAAGGGCGAGAGGGGCTT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAGGCCCTTCAGGACCCTaGGCTCCAGGACGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTGPSGP*APGRPA
Trigger: TGCTGGACGTCCTGGAGCCAAGGGTCCTGAAGGGCC...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGCCCTTCAGGACCCTaGGCTCCAGGACGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGPSGP*APGRPA
Trigger: TGCTGGACGTCCTGGAGCCAAGGGTCCTGAAGGGCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCCCACGGTCACCCTaGGGTCCAGATGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCSPRSP*GPDDPG
Trigger: CCCTGGATCATCTGGACCCAAGGGTGACCGTGGGGA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAGGCCAGGATCACCCTaGGGCCCTCGAGGACCCTCT +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTRPGSP*GPRGPS
Trigger: AGAGGGTCCTCGAGGGCCCAAGGGTGATCCTGGCCT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCTGGGTCCCCAGCTTaGCCTGCAGCACCATTCGGC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLPGSPA*PAAPFG
Trigger: GCCGAATGGTGCTGCAGGCAAAGCTGGGGACCCAGG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAGGCCCTGCTCCCCTTaGGATCCAGTCTCCCCACGG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRRPCSP*DPVSPR
Trigger: CCGTGGGGAGACTGGATCCAAAGGGGAGCAGGGCCT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAGGCCCTGCTCCCCTTaGGATCCAGTCTCCCCACGG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTRPCSP*DPVSPR
Trigger: CCGTGGGGAGACTGGATCCAAAGGGGAGCAGGGCCT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCGCCTGAGTCCCCCTaGGGGCCTCGACGCCGTTCG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPESP*GPRRRS
Trigger: CGAACGGCGTCGAGGCCCCAAGGGGGACTCAGGCGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCCCCTTAGCACCCTaGAGTCCAGGGGGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCSPLAP*SPGGPC
Trigger: ACAGGGACCCCCTGGACTCAAGGGTGCTAAGGGGGA...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGAGTCCTCGGTCACCTTaGGCTCCCGGCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSPRSP*APGSPT
Trigger: GGTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGACT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCCCCCATCTCTCCTTaGTGTCCTGCCAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSPISP*CPASPG
Trigger: CCCCGGGCTGGCAGGACACAAAGGAGAGATGGGGGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGAAGCCTCGGTCACCCTaGGGACCGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTKPRSP*GPIRPS
Trigger: GGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCTT...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAAAGCCTCGGTCACCCTaGGGACCGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTKPRSP*GPIRPS
Trigger: GGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCTT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp CAGGCACCAAGTTCCAGGAAAGGAGGATGGATGTGGGGCCCAGGATaGCCGGGCGCAGGGTCTGCTCAACAGAAGCGTCAGTGCGAGCCA +
Preference number: 5 (lower is better)
Translates to: QAPSSRKGGWMWGPG*PGAGSAQQKRQCEP
Trigger: TGGCTCGCACTGACGCTTCTGTTGAGCAGACCCTGCGCCCGGTCATCCTGGGCCCCACATCCATCCTCCTTTCCTGGAACTTGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp ACGTGCTGGCGGCGCCCAGGAGCATCTGGTGCCAACATGTATCTGTaGGCTGTGACCACGGCTGTGCCCAGGTTGTTCCCACTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TCWRRPGASGANMYL*AVTTAVPRLFPLGS
Trigger: GGACCCAAGTGGGAACAACCTGGGCACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp CCCCCAGAGCTCAGAGTGTGGAAGCCGACAGTGTGTGGCTCCCTGTaGTCCAGAGAGCAGGCTCCTGGATGTTGGGACATGCAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: PPELRVWKPTVCGSL*SREQAPGCWDMQPD
Trigger: GTCGGGCTGCATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACTGTCGGCTTCCACACTCTGAGCTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS GCA 90 bp TCGAGTCATCCGGAGGTCGGGTCACAGGCACGCCACCAGCAGTCGTaGACACTCTCCGGGAAACGAGGGGCAGTAGTGTCCTCAAGATGC +
Preference number: 5 (lower is better)
Translates to: SSHPEVGSQARHQQS*TLSGKRGAVVSSRC
Trigger: GCATCTTGAGGACACTACTGCCCCTCGTTTCCCGGAGAGTGTGCACGACTGCTGGTGGCGTGCCTGTGACCCGACCTCCGGATGACTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCACACTGCGGCCAAATAGGGTGCTCACGGTCACCTCATAGTCCGTaGCAGGCTCCAAGTCACGCAGCAACACTGAACCCTGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PHCGQIGCSRSPHSP*QAPSHAATLNPAQG
Trigger: GCCCTGGGCAGGGTTCAGTGTTGCTGCGTGACTTGGAGCCTGGCACGGACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCAGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp ACAGAGGCAGGGGGCCCATCCACGCCAGCCACATGGGCCCTCACATaGACCGTATACTCAGTATCTGGCTCCAGTCCATCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TEAGGPSTPATWALT*TVYSVSGSSPSSSA
Trigger: GGCTGAGCTGGATGGACTGGAGCCAGATACTGAGTATACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGATGGGCCCCCTGCCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CAGAACCATCACCCCTGGTACGTGCTGGCGGCGCCCAGGAGCATCTaGTGCCAACATGTATCTGTGAGCTGTGACCACGGCTGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: QNHHPWYVLAAPRSI*CQHVSVSCDHGCAQ
Trigger: CTGGGCACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGATGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp AGGAGGTCCCCGTGGGCCCTGCTCACCCGGAGACCCAGGTTGTCCTaGGAGGCCTGGAGCTCCATCCTCAGAGTCACCTTTTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: RRSPWALLTRRPRLS*EAWSSILRVTFFSF
Trigger: AAAGGAGAAAAAGGTGACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGTGAGCAGGGCCCACGGGGACCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGATCAGGATGCAGACCTaGGGGACACCAGGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLIRMQT*GTPGRA
Trigger: GGCCCGACCTGGTGTCCCCAAGGTCTGCATCCTGAT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACTGCCCCTTCAGCCTTaGGGCAGCTGTGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTLPLQP*GSCVHQ
Trigger: CTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCAG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCGGGCAGCTCGGTGGCTaGCAGGTCTGTTACAGGGCT +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHIGQLGG*QVCYRA
Trigger: AGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCC...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGGGCAGCTCGGTGGCTaGCAGGTCTGTTACAGGGCT +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLGQLGG*QVCYRA
Trigger: AGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCTGGCCACCCTCAGGTaGCCAGTGCAGAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRLATLR*PVQKEA
Trigger: GGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCAG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCACGGCTGTGCCCAGGTaGTTCCCACTTGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCTAVPR*FPLGSM
Trigger: CATGGACCCAAGTGGGAACAACCTGGGCACAGCCGT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCGCCAGGAGGCCCAACTaGTCCTCTCAGGCCCATCTC +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLARRPN*SSQAHL
Trigger: GAGATGGGCCTGAGAGGACAAGTTGGGCCTCCTGGC...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCAAGCCCCGGTCACCTTaGGGGCCAATAGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCKPRSP*GPIAPG
Trigger: TCCTGGAGCTATTGGCCCCAAAGGTGACCGGGGCTT...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGGCTCCACGCTCACCCTaGGGGCCATCACGACCTTCT +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLAPRSP*GPSRPS
Trigger: AGAAGGTCGTGATGGCCCCAAGGGTGAGCGTGGAGC...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCATCCACAGACACCTaGGGGCCAGGGGGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSSTDT*GPGGPG
Trigger: CCCCGGACCCCCTGGCCCCAAGGTGTCTGTGGATGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCGGACCTTGGTCACCATaGCTGCCCGGCTCCCCCTTA +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRGPWSP*LPGSPL
Trigger: TAAGGGGGAGCCGGGCAGCAATGGTGACCAAGGTCC...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCTCCCTTCTCTCCCTTaGCTCCAGGGAGCCCGACCA +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHILPSLP*LQGARP
Trigger: TGGTCGGGCTCCCTGGAGCAAAGGGAGAGAAGGGAG...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTCCCTTCTCTCCCTTaGCTCCAGGGAGCCCGACCA +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLLPSLP*LQGARP
Trigger: TGGTCGGGCTCCCTGGAGCAAAGGGAGAGAAGGGAG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCTCTCCCTTGTCTCCTTaGAGTCCAGAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTASPLSP*SPEAPG
Trigger: ACCTGGGGCCTCTGGACTCAAAGGAGACAAGGGAGA...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCACCAGGCTCTCCCTaGCTGCCCTTGTCACCAGGG +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPGSP*LPLSPG
Trigger: CCCTGGTGACAAGGGCAGCAAGGGAGAGCCTGGTGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCACCAGGCTCTCCCTaGCTGCCCTTGTCACCAGGG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSPGSP*LPLSPG
Trigger: CCCTGGTGACAAGGGCAGCAAGGGAGAGCCTGGTGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGAACCCGGCTGAGCCCTaGTCACCAGGCTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLNPAEP*SPGSPL
Trigger: CAAGGGAGAGCCTGGTGACAAGGGCTCAGCCGGGTT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCAACCCGGCTGAGCCCTaGTCACCAGGCTCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRNPAEP*SPGSPL
Trigger: CAAGGGAGAGCCTGGTGACAAGGGCTCAGCCGGGTT...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCCTGCTGCACCAGGTaGACCCTGGGGTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPCCTR*TLGSQE
Trigger: CTCCTGGGACCCCAGGGTCAACCTGGTGCAGCAGGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCGGGTCCCAAAACGGTaGGCATTCCCTCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCRVPKR*AFPPQP
Trigger: TGGCTGTGGAGGGAATGCCAACCGTTTTGGGACCCG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCATGTCATCACAGGCTaGGGTCAAGGGGCGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCHVITG*GQGAGQ
Trigger: CTGACCCGCCCCTTGACCCAAGCCTGTGATGACATG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp CCAGGAACCCTGGTCCAGGTAATGGTGACAGATGAGCTGCTGGCCTaGGTCACATGGACCGTCCTCACTGGGCCCAGTGGGTCCGTTCGA +
Preference number: 5 (lower is better)
Translates to: PGTLVQVMVTDELLA*VTWTVLTGPSGSVR
Trigger: TCGAACGGACCCACTGGGCCCAGTGAGGACGGTCCATGTGACTCAGGCCAGCAGCTCATCTGTCACCATTACCTGGACCAGGGTTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GTATCCTGTGGCGCCAGGAACCCTGGTCCAGGTAATGGTGACAGATaGGCTGCTGGCCTGAGTCACATGGACCGTCCTCACTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VSCGARNPGPGNGDR*AAGLSHMDRPHWAQ
Trigger: CTGGGCCCAGTGAGGACGGTCCATGTGACTCAGGCCAGCAGCTCATCTGTCACCATTACCTGGACCAGGGTTCCTGGCGCCACAGGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GCTAAGCTCACGGATGGCGCGGATCACATCACCCCCAGAGCCAAGTaGATCCAGGCCGAACTCTGTCCGTGGGTCATCGCTGTACTGCAC +
Preference number: 5 (lower is better)
Translates to: AKLTDGADHITPRAK*IQAELCPWVIAVLH
Trigger: GTGCAGTACAGCGATGACCCACGGACAGAGTTCGGCCTGGATGCACTTGGCTCTGGGGGTGATGTGATCCGCGCCATCCGTGAGCTTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp AACCATCACCCCTGGTACGTGCTGGCGGCGCCCAGGAGCATCTGGTaGCAACATGTATCTGTGAGCTGTGACCACGGCTGTGCCCAGGTT +
Preference number: 5 (lower is better)
Translates to: NHHPWYVLAAPRSIW*QHVSVSCDHGCAQV
Trigger: AACCTGGGCACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGATGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp TGCTGCCTGTCACAGCCCGATGGTACCAGCGCAGGGTGTAGGCAGTaGAGGAGCCCTCATCCAGTGGCAGGGAACAGGGGTCATCACTAT +
Preference number: 5 (lower is better)
Translates to: CCLSQPDGTSAGCRQ*RSPHPVAGNRGHHY
Trigger: ATAGTGATGACCCCTGTTCCCTGCCACTGGATGAGGGCTCCTGCACTGCCTACACCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328333.12
ENST00000466591.1
ENST00000487017.5
ENST00000681320.1
CDS GCA 90 bp TCCCTCCACAGCCACCATAGACAAAAGGGTGACAGGCCTCTGTGCTaGCTGTCACAGCCCGATGGTACCAGCGCAGGGTGTAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SLHSHHRQKGDRPLC*LSQPDGTSAGCRQC
Trigger: GCACTGCCTACACCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTCACCCTTTTGTCTATGGTGGCTGTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328333.12
ENST00000465238.5
ENST00000466591.1
ENST00000470076.1
ENST00000487017.5
ENST00000681320.1
CDS GCA 90 bp GCAAGGTGGGCAGCACTGATTTCCACTGTGTGCACACAGTGCCCATaGGTGTGCCCTGCATGCAGACCCTACGTGCTTGGCGTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: ARWAALISTVCTQCP*VCPACRPYVLGVCP
Trigger: AGGGCACACGCCAAGCACGTAGGGTCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAGTGCTGCCCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS CCA 90 bp TACTCTCAAGGATTGGCTGCTTGGCTCAGACAGCACCAGGTCTCGTaGAGCAGAGGTCGAGTCATCCGGAGGTCGGGTCACAGGCACGCC +
Preference number: 5 (lower is better)
Translates to: YSQGLAAWLRQHQVS*SRGRVIRRSGHRHA
Trigger: GGCGTGCCTGTGACCCGACCTCCGGATGACTCGACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp GTCCTCACAACCACAGAGGCAGGGGGCCCATCCACGCCAGCCACATaGGCCCTCACATGCACCGTATACTCAGTATCTGGCTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: VLTTTEAGGPSTPAT*ALTCTVYSVSGSSP
Trigger: TGGACTGGAGCCAGATACTGAGTATACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGATGGGCCCCCTGCCTCTGTGGTTGTGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp GGTCTGGACAGAGTCCATACCCGGCGCCAAGCGACGCAGCTGCTCTaGGTCCGCTCCAGCCATTCCCAACATCACCACATTAAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLDRVHTRRQATQLL*VRSSHSQHHHIKPR
Trigger: TCTGGGCTTAATGTGGTGATGTTGGGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGCGCCGGGTATGGACTCTGTCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CTGACACAGGGCTGTGGCCAGACCACTGACTGCCTGGTCCAGGCTTaGCCCATCATCCACGGCGAAGAAGGTCTGGACAGAGTCCATACC +
Preference number: 5 (lower is better)
Translates to: LTQGCGQTTDCLVQA*PIIHGEEGLDRVHT
Trigger: GGTATGGACTCTGTCCAGACCTTCTTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAGTCAGTGGTCTGGCCACAGCCCTGTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp TCCTGGAGCCCCTTTCTGACCCATAGACAGGTGGGAGTTCAGGCATaGCACAGGCACAGGGAGCCCACACGCGAGTGCAGACATCTGGCT +
Preference number: 5 (lower is better)
Translates to: SWSPFLTHRQVGVQA*HRHREPTRECRHLA
Trigger: AGCCAGATGTCTGCACTCGCGTGTGGGCTCCCTGTGCCTGTGCCATGCCTGAACTCCCACCTGTCTATGGGTCAGAAAGGGGCTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422991.1
CDS CCA 90 bp GAAGCCGACAGTGTGTGGCTCCCTGTGATCCAGAGAGCAGGCTCCTaGATGTTGGGACATGCAGCCCGACTCAGGGGCTCAGACATGTGC +
Preference number: 5 (lower is better)
Translates to: EADSVWLPVIQRAGS*MLGHAARLRGSDMC
Trigger: GCACATGTCTGAGCCCCTGAGTCGGGCTGCATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACTGTCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCGGACCTCGCGGAAATaGCTGCGGCCAATGGATGAG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRRTSRK*LRPMDE
Trigger: CTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCG...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACGGACCTCGCGGAAATaGCTGCGGCCAATGGATGAG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTRTSRK*LRPMDE
Trigger: CTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACCCACAGCAAATAGCTaGACCCCCTGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSPTANS*TPCPFS
Trigger: GCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGTGGG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCAGTGGGAACCACGGTaGCAGGGGTGGCCACCTCGT +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHQWEPR*QGWPPR
Trigger: ACGAGGTGGCCACCCCTGCAACCGTGGTTCCCACTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCCACCCTCACTCGCGTaGCATCTGACACCACAACCC +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLPPSLA*HLTPQP
Trigger: GGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCACGGCTGTGCCCAGGTaGTTCCCACTTGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHITAVPR*FPLGSM
Trigger: CATGGACCCAAGTGGGAACAACCTGGGCACAGCCGT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACACCCCCTTCTGGCCCTTaGGACAATACACTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTPPSGP*DNTLGR
Trigger: CCTGCCCAGTGTATTGTCCAAAGGGCCAGAAGGGGG...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTTCACCTCCGATGACTaGTCCGGGAGCCCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHFTSDD*SGSPRL
Trigger: GAGCCGGGGGCTCCCGGACAAGTCATCGGAGGTGAA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTTCACCTCCGATGACTaGTCCGGGAGCCCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAFTSDD*SGSPRL
Trigger: GAGCCGGGGGCTCCCGGACAAGTCATCGGAGGTGAA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAAAGCCCCGGTCACCTTaGGGGCCAATAGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSKPRSP*GPIAPG
Trigger: TCCTGGAGCTATTGGCCCCAAAGGTGACCGGGGCTT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTGGGCCCCGTTCCCCTaGGACTCCGGTAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAWAPFP*DSGSSS
Trigger: AGAGGAGCTACCGGAGTCCAAGGGGAACGGGGCCCA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCGCAGGGCAGATGCCTaGATGCCAGCAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLRRADA*MPAVSS
Trigger: GCTGGAAACTGCTGGCATCAAGGCATCTGCCCTGCG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCCGCAGGGCAGATGCCTaGATGCCAGCAGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLRRADA*MPAVSS
Trigger: GCTGGAAACTGCTGGCATCAAGGCATCTGCCCTGCG...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCCCTGTCTCCCCCACTaGTCCAGGCAAACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLPCLPH*SRQTWR
Trigger: TCTCCAGGTTTGCCTGGACAAGTGGGGGAGACAGGG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACAGTCCTCGGTCACCTTaGGCTCCCGGCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSPRSP*APGSPT
Trigger: GGTGGGTGAGCCGGGAGCCAAAGGTGACCGAGGACT...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGCCACTCCTGGGTCACCCTaGAAACCTTTGGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SQAWVKGRVRRQSHPLTATPGSP*KPLGPG
Trigger: TCCAGGACCCAAAGGTTTCAAGGGTGACCCAGGAGT...GGCAGTGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCTCCCCGAGGTCCTTaGTCACCATCCAAGCCCCGA +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSPRGP*SPSKPR
Trigger: TCGGGGCTTGGATGGTGACAAAGGACCTCGGGGAGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCTCCCCGAGGTCCTTaGTCACCATCCAAGCCCCGA +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPRGP*SPSKPR
Trigger: TCGGGGCTTGGATGGTGACAAAGGACCTCGGGGAGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCTCACCAGGGTCCCCATaGTCTCCCCGAGGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PRISTMSSQAWVKGRVRRSPGSP*SPRGPL
Trigger: CAAAGGACCTCGGGGAGACAATGGGGACCCTGGTGA...GCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCCCTTGCTGCCCTaGTCACCAGGGTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTSPLLP*SPGSPL
Trigger: CAATGGGGACCCTGGTGACAAGGGCAGCAAGGGAGA...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCTCCCTTGCTGCCCTaGTCACCAGGGTCCCCATTG +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSPLLP*SPGSPL
Trigger: CAATGGGGACCCTGGTGACAAGGGCAGCAAGGGAGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCCCCCATCTCTCCTTaGTGTCCTGCCAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPISP*CPASPG
Trigger: CCCCGGGCTGGCAGGACACAAAGGAGAGATGGGGGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CACTGGCTGCTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAAGCTaGGGACCTCGCGGAAATTGCTGCGGCCAATGGATGAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: HWLLQRKAAPALRES*GPRGNCCGQWMRSH
Trigger: ATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp ATCGCTGTACTGCACTGTGGCAAAGCGCACACCCTGTGCACTGGCTaGTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAAGCTGCGGAC +
Preference number: 5 (lower is better)
Translates to: IAVLHCGKAHTLCTG*SRERQHQPFEKAAD
Trigger: GTCCGCAGCTTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCGTGGGTCATCGCTGTACTGCACTGTGGCAAAGCGCACACCCTGTaGACTGGCTGCTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAA +
Preference number: 5 (lower is better)
Translates to: PWVIAVLHCGKAHTL*TGCSRERQHQPFEK
Trigger: TTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGATGACCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp TCACAGGGCCACTGGCCGCTGTCCACTGTACTCTCAAGGATTGGCTaGTTGGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: SQGHWPLSTVLSRIG*LAQTAPGLVEQRSS
Trigger: ACTCGACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CTTCTAGGGCAGTGGTCCGAGCTGTCCCGCTCACAGCCTCCCCGATaGTGTTGGCGTAGAGGGCAATCACAGTCACTTGGTACTCGGTCA +
Preference number: 5 (lower is better)
Translates to: LLGQWSELSRSQPPR*CWRRGQSQSLGTRS
Trigger: TGACCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGAGCGGGACAGCTCGGACCACTGCCCTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCGCACAGTGTAGCTAAGCCCAGCCTGAACGTCATCCAAGTCGAATaGTGTCTGACTCCCAGGAAGCACCAGGGTCCGCTCAACCCCCTG +
Preference number: 5 (lower is better)
Translates to: PHSVAKPSLNVIQVE*CLTPRKHQGPLNPL
Trigger: CAGGGGGTTGAGCGGACCCTGGTGCTTCCTGGGAGTCAGACAGCATTCGACTTGGATGACGTTCAGGCTGGGCTTAGCTACACTGTGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCTACCCAGGTGATCCGTAGAACGTCGCTGGAAGCATTGAGGATCTaGAGCCTCGACACACGACCCACAGGCTCAGGGGCAGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: PTQVIRRTSLEALRI*SLDTRPTGSGAVLT
Trigger: TGTGAGGACTGCCCCTGAGCCTGTGGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGTTCTACGGATCACCTGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp AGTAGTGAAGGATGCCTGACACAGGGCTGTGGCCAGACCACTGACTaGCTGGTCCAGGCTTGGCCCATCATCCACGGCGAAGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SSEGCLTQGCGQTTD*LVQAWPIIHGEEGL
Trigger: CAGACCTTCTTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAGTCAGTGGTCTGGCCACAGCCCTGTGTCAGGCATCCTTCACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CATTCCCTCCACAGCCACCATAGACAAAAGGGTGACAGGCCTCTGTaGTGCCTGTCACAGCCCGATGGTACCAGCGCAGGGTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: HSLHSHHRQKGDRPL*CLSQPDGTSAGCRQ
Trigger: CTGCCTACACCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTCACCCTTTTGTCTATGGTGGCTGTGGAGGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328333.12
ENST00000465238.5
ENST00000466591.1
ENST00000470076.1
ENST00000487017.5
ENST00000681320.1
CDS CCA 90 bp GGTCATCGCTGTACTGCACTGTGGCAAAGCGCACACCCTGTGCACTaGCTGCTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GHRCTALWQSAHPVH*LLQRKAAPALRESC
Trigger: GCAGCTTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGATGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CATCCAGGCCGAACTCTGTCCGTGGGTCATCGCTGTACTGCACTGTaGCAAAGCGCACACCCTGTGCACTGGCTGCTCCAGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: HPGRTLSVGHRCTAL*QSAHPVHWLLQRKA
Trigger: TGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGATGACCCACGGACAGAGTTCGGCCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp AGGGCCACTGGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGCTTaGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGGTCGAGTCATC +
Preference number: 5 (lower is better)
Translates to: RATGRCPLYSQGLAA*LRQHQVSWSRGRVI
Trigger: GATGACTCGACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CCGTATACTCAGTATCTGGCTCCAGTCCATCCAGCTCAGCCACCGTaGCCTCCCCAGAAACCAACTGGGATTTCTCTGGGCCGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PYTQYLAPVHPAQPP*PPQKPTGISLGRGL
Trigger: CAGCCCACGGCCCAGAGAAATCCCAGTTGGTTTCTGGGGAGGCCACGGTGGCTGAGCTGGATGGACTGGAGCCAGATACTGAGTATACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CAAGACAGGGCCCCCAGAGCTCAGAGTGTGGAAGCCGACAGTGTGTaGCTCCCTGTGATCCAGAGAGCAGGCTCCTGGATGTTGGGACAT +
Preference number: 5 (lower is better)
Translates to: QDRAPRAQSVEADSV*LPVIQRAGSWMLGH
Trigger: ATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACTGTCGGCTTCCACACTCTGAGCTCTGGGGGCCCTGTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCAGCCACATGGAGAATaGCAGCCCCTGTGCGAGTGT +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLQPHGE*QPLCEC
Trigger: ACACTCGCACAGGGGCTGCAATTCTCCATGTGGCTG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACATCAGGATGCAGACCTaGGGGACACCAGGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHIRMQT*GTPGRA
Trigger: GGCCCGACCTGGTGTCCCCAAGGTCTGCATCCTGAT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CCCCAGAATCAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGGGCAATCACAGTCACTaGGTACTCGGTCAGTGGCCG +
Preference number: 5 (lower is better)
Translates to: PQNQHHVITGLGQGAGQTGNHSH*VLGQWP
Trigger: CGGCCACTGACCGAGTACCAAGTGACTGTGATTGCC...CGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCACGTCGCTGGAAGCATaGAGGATCTGCAGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHITSLEA*RICSLD
Trigger: GTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACGTCGCTGGAAGCATaGAGGATCTGCAGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTSLEA*RICSLD
Trigger: GTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCTGGCCACCCTCAGGTaGCCAGTGCAGAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHLATLR*PVQKEA
Trigger: GGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCAG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCACCCGCTGGGAGCTaGAGATCCCTGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTSPAGS*RSLEVS
Trigger: AGACACTTCCAGGGATCTCAAGCTCCCAGCGGGTGA...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACGCTCCACGCTCACCCTaGGGGCCATCACGACCTTCT +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHAPRSP*GPSRPS
Trigger: AGAAGGTCGTGATGGCCCCAAGGGTGAGCGTGGAGC...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGGACCTTGGTCACCATaGCTGCCCGGCTCCCCCTTA +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHGPWSP*LPGSPL
Trigger: TAAGGGGGAGCCGGGCAGCAATGGTGACCAAGGTCC...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCTCCCCGGTCTCCTTaGATGCCTGGCACACCCCTG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPRSP*MPGTPL
Trigger: CAGGGGTGTGCCAGGCATCAAAGGAGACCGGGGAGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTCTCCCCGGTCTCCTTaGATGCCTGGCACACCCCTG +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSPRSP*MPGTPL
Trigger: CAGGGGTGTGCCAGGCATCAAAGGAGACCGGGGAGA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCATCTCCCTTGTCTCCTTaGAGTCCAGAGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSSPLSP*SPEAPG
Trigger: ACCTGGGGCCTCTGGACTCAAAGGAGACAAGGGAGA...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp AAGAAGGTCTGGACAGAGTCCATACCCGGCGCCAAGCGACGCAGCTaGTCTGGGTCCGCTCCAGCCATTCCCAACATCACCACATTAAGC +
Preference number: 5 (lower is better)
Translates to: KKVWTESIPGAKRRS*SGSAPAIPNITTLS
Trigger: GCTTAATGTGGTGATGTTGGGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGCGCCGGGTATGGACTCTGTCCAGACCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp CCGTCAGAGGAGTGTACTGGACCTTGTAGCCAGTCACAGGGCCACTaGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGCTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSEECTGPCSQSQGH*PLSTVLSRIGCLAQ
Trigger: CTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTGGCTACAAGGTCCAGTACACTCCTCTGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp AGAGGGACGCTCAGATACTACCATAGACAGGTGGGAGTTCAGGCATaGCACAGGCACAGGGAGCCCACACGCGAGTGCAGACATCTGGCT +
Preference number: 5 (lower is better)
Translates to: RGTLRYYHRQVGVQA*HRHREPTRECRHLA
Trigger: AGCCAGATGTCTGCACTCGCGTGTGGGCTCCCTGTGCCTGTGCCATGCCTGAACTCCCACCTGTCTATGGTAGTATCTGAGCGTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCCACAGCAAATAGCTaGACCCCCTGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPTANS*TPCPFS
Trigger: GCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGTGGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGTCAAGGATTGGCTGCTaGGCTCAGACAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLSRIGC*AQTAPG
Trigger: ACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGA...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCCACCCTCACTCGCGTaGCATCTGACACCACAACCC +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHPPSLA*HLTPQP
Trigger: GGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCCCCTTCTGGCCCTTaGGACAATACACTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPPSGP*DNTLGR
Trigger: CCTGCCCAGTGTATTGTCCAAAGGGCCAGAAGGGGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTCCCCACGATCGCCTTaGTCACCCTTCATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLSPRSP*SPFMAV
Trigger: AACAGCCATGAAGGGTGACAAAGGCGATCGTGGGGA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCTCCCCACGATCGCCTTaGTCACCCTTCATGGCTGTT +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHISPRSP*SPFMAV
Trigger: AACAGCCATGAAGGGTGACAAAGGCGATCGTGGGGA...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTGTCTCCTTTGGGACCTaGGTCACCATTGCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAVSFGT*VTIAAR
Trigger: CCGGGCAGCAATGGTGACCAAGGTCCCAAAGGAGAC...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGACACCCCTGTCTCCTTaGGGACCTTGGTCACCATTG +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLTPLSP*GPWSPL
Trigger: CAATGGTGACCAAGGTCCCAAAGGAGACAGGGGTGT...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCACACCCCTGTCTCCTTaGGGACCTTGGTCACCATTG +
Preference number: 5 (lower is better)
Translates to: APCHHRLGSRGGSDASHITPLSP*GPWSPL
Trigger: CAATGGTGACCAAGGTCCCAAAGGAGACAGGGGTGT...GATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCCTGTCTCCCCCACTaGTCCAGGCAAACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPCLPH*SRQTWR
Trigger: TCTCCAGGTTTGCCTGGACAAGTGGGGGAGACAGGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCAACTCCTGGGTCACCCTaGAAACCTTTGGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSTPGSP*KPLGPG
Trigger: TCCAGGACCCAAAGGTTTCAAGGGTGACCCAGGAGT...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CAGCACCATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACAACTCCAGGGTCTCCCTaGTCTCCTTTGAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: QHHVITGLGQGAGQTPVTTPGSP*SPLSPE
Trigger: CTCTGGACTCAAAGGAGACAAGGGAGACCCTGGAGT...TGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACATGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGACTCCAGGGTCTCCCTaGTCTCCTTTGAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLTPGSP*SPLSPE
Trigger: CTCTGGACTCAAAGGAGACAAGGGAGACCCTGGAGT...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACTCACCAGGGTCCCCATaGTCTCCCCGAGGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHSPGSP*SPRGPL
Trigger: CAAAGGACCTCGGGGAGACAATGGGGACCCTGGTGA...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCGGGTCCCAAAACGGTaGGCATTCCCTCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHRVPKR*AFPPQP
Trigger: TGGCTGTGGAGGGAATGCCAACCGTTTTGGGACCCG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GAATCTCAGCTCATTATCTGGGCCTCAGTCCTGGGCAGTACCTGGTaGGGACAGGTTGGAAACGGTCGTCAGCCATCTGACCTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: ESQLIIWASVLGSTW*GQVGNGRQPSDLPR
Trigger: CCGGGGAAGGTCAGATGGCTGACGACCGTTTCCAACCTGTCCTCACCAGGTACTGCCCAGGACTGAGGCCCAGATAATGAGCTGAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS TCA 90 bp AGAGATGGACCCTCTCCCAAAGTGCACGCTCCCCTCAATTCACCATaGCCATGGCTTCAACTCACCCGCTCCCCTTTCTCGCCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RDGPSPKVHAPLNSP*PWLQLTRSPFSPWS
Trigger: TGACCAGGGCGAGAAAGGGGAGCGGGTGAGTTGAAGCCATGGTCATGGTGAATTGAGGGGAGCGTGCACTTTGGGAGAGGGTCCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS TCA 90 bp GGCCACAGCTTCAGAGGTTGGGGCAGGCAGGCTGGAAGATGGTTATaGGGTTGGAAGGGTAGGGAAGGTTCAGGGATCAGGAGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: GHSFRGWGRQAGRWL*GWKGREGSGIRSQS
Trigger: GCTCTGACTCCTGATCCCTGAACCTTCCCTACCCTTCCAACCTCATAACCATCTTCCAGCCTGCCTGCCCCAACCTCTGAAGCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS TCA 90 bp GGGATCTGGGAGATCAGACCAGAGCACACGTGTGCCCAGATGTGGTaGGAAACAGACCAAGGATGGGCACACAGAAGCCAAGACAGGGCC +
Preference number: 5 (lower is better)
Translates to: GIWEIRPEHTCAQMW*ETDQGWAHRSQDRA
Trigger: GGCCCTGTCTTGGCTTCTGTGTGCCCATCCTTGGTCTGTTTCTCACCACATCTGGGCACACGTGTGCTCTGGTCTGATCTCCCAGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS-3UTR CAA 90 bp TGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCACTGTACTCTCAAGGATaGGCTGCTTGGCTCAGACAG +
Preference number: 5 (lower is better)
Translates to: CHHRLGSRGGSDASHIRSLYSQG*AAWLRQ
Trigger: CTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAG...TGAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTTCACCCGCTGGGAGCTaGAGATCCCTGGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHASPAGS*RSLEVS
Trigger: AGACACTTCCAGGGATCTCAAGCTCCCAGCGGGTGA...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCATTCAGGCCAGGTTaGCCATCCTCGCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPFRPG*PSSPGF
Trigger: AAAGCCAGGCGAGGATGGCAAACCTGGCCTGAATGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCCATTCAGGCCAGGTTaGCCATCCTCGCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHAPFRPG*PSSPGF
Trigger: AAAGCCAGGCGAGGATGGCAAACCTGGCCTGAATGG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp GCAGCACCAGCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATTGCTaGGGCCAATGGATGAGGAGCCATCCAGTAAGAACACAATGTCAG +
Preference number: 5 (lower is better)
Translates to: AAPALRESCGPRGNC*GQWMRSHPVRTQCQ
Trigger: CTGACATTGTGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp CCAAAGTCACCGAGTCGATCGAGGTGTCCACCACACGTAGTTCAATaGTTGGAACACGAGGTGACTCAGTGCGCGCAGTCACCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PKSPSRSRCPPHVVQ*LEHEVTQCAQSPLQ
Trigger: CTGCAGAGGTGACTGCGCGCACTGAGTCACCTCGTGTTCCAAGCATTGAACTACGTGTGGTGGACACCTCGATCGACTCGGTGACTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGTCAGGGTCAGCATTCTaGATCCCCACAGCAAATAGC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLSGSAF*IPTANS
Trigger: GCTATTTGCTGTGGGGATCAAGAATGCTGACCCTGA...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ATGTCATCACAGGCTTGGGTCAAGGGGCGGGTCAGACGCCAGTCACATCCGCTCTCAGGGTCAGCATTCTaGATCCCCACAGCAAATAGC +
Preference number: 5 (lower is better)
Translates to: MSSQAWVKGRVRRQSHPLSGSAF*IPTANS
Trigger: GCTATTTGCTGTGGGGATCAAGAATGCTGACCCTGA...GAGCGGATGTGACTGGCGTCTGACCCGCCCCTTGACCCAAGCCTGTGATGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACTCAAGGATTGGCTGCTaGGCTCAGACAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHSRIGC*AQTAPG
Trigger: ACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGA...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCTGCACGTAGTTCAATGCTaGGAACACGAGGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: LTCTQASSTKGRDSGVLLHVVQC*EHEVTQ
Trigger: CTGAGTCACCTCGTGTTCCAAGCATTGAACTACGTG...CAGCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCCATGTCACGGATCCTTaGCAAGATAATGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: RSRAHKPLAPRGGTVGFCHVTDP*QDNAKV
Trigger: GACCTTGGCATTATCTTGCAAAGGATCCGTGACATG...GCAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACCCAGGTTGTTCCCACTaGGGTCCATGTAGGGCATGT +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHPGCSH*GPCRAC
Trigger: ACATGCCCTACATGGACCCAAGTGGGAACAACCTGG...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp AAGGCAGCACCAGCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATTaGTGCGGCCAATGGATGAGGAGCCATCCAGTAAGAACACAATGT +
Preference number: 5 (lower is better)
Translates to: KAAPALRESCGPRGN*CGQWMRSHPVRTQC
Trigger: ACATTGTGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGTGCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 90 bp TCAGGTGTGTCCTGGGATCTGGGAGATCAGACCAGAGCACACGTGTaGCCAGATGTGGTGAGAAACAGACCAAGGATGGGCACACAGAAG +
Preference number: 5 (lower is better)
Translates to: SGVSWDLGDQTRAHV*PDVVRNRPRMGTQK
Trigger: CTTCTGTGTGCCCATCCTTGGTCTGTTTCTCACCACATCTGGGCACACGTGTGCTCTGGTCTGATCTCCCAGATCCCAGGACACACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 90 bp GCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATTGCTGCGGCCAATaGATGAGGAGCCATCCAGTAAGAACACAATGTCAGCGGCGTAAA +
Preference number: 5 (lower is better)
Translates to: ALRESCGPRGNCCGQ*MRSHPVRTQCQRRK
Trigger: TTTACGCCGCTGACATTGTGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCTGTACTCTCAAGGATaGGCTGCTTGGCTCAGACAG +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHALYSQG*AAWLRQ
Trigger: CTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAG...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp ACGCTCACGTGCACACAAGCCTCTAGCACCAAGGGGAGGGACAGTGGGGTTCTGCATGTCACGGATCCTTaGCAAGATAATGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TLTCTQASSTKGRDSGVLHVTDP*QDNAKV
Trigger: GACCTTGGCATTATCTTGCAAAGGATCCGTGACATG...CAGAACCCCACTGTCCCTCCCCTTGGTGCTAGAGGCTTGTGTGCACGTGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp AGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTACAGCTGAGTCTCCCTaGTCACCCTTTAGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RLDPRDQVTEITDVHTHATAESP*SPFSPA
Trigger: TGCAGGACTAAAGGGTGACAAGGGAGACTCAGCTGT...AGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GAACTCAGACATGCGACCAAGAATTGGCTCACAGGAGCTCAGACATaGCCATGGCCTATCTCAGGACAGCACAGACAGAGGGACGCTCAG +
Preference number: 5 (lower is better)
Translates to: ELRHATKNWLTGAQT*PWPISGQHRQRDAQ
Trigger: CTGAGCGTCCCTCTGTCTGTGCTGTCCTGAGATAGGCCATGGTCATGTCTGAGCTCCTGTGAGCCAATTCTTGGTCGCATGTCTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 90 bp TTGCAAGATAATGCCAAGGTCATGGGAGCCATTCAGTGGGAACAGTaGGGAGGGCCGATGACTGTAAGACAGCAGGCCAACCTGAACTGC +
Preference number: 5 (lower is better)
Translates to: LQDNAKVMGAIQWEQ*GGPMTVRQQANLNC
Trigger: GCAGTTCAGGTTGGCCTGCTGTCTTACAGTCATCGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCATGACCTTGGCATTATCTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp ACGGATCCTTTGCAAGATAATGCCAAGGTCATGGGAGCCATTCAGTaGGAACAGTGGGGAGGGCCGATGACTGTAAGACAGCAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: TDPLQDNAKVMGAIQ*EQWGGPMTVRQQAN
Trigger: GTTGGCCTGCTGTCTTACAGTCATCGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCATGACCTTGGCATTATCTTGCAAAGGATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS-3UTR CAA 90 bp GGAAGGCTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACCACGTAGTTCAATGCTaGGAACACGAGGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: GRLDPRDQVTEITDVHTHHVVQC*EHEVTQ
Trigger: CTGAGTCACCTCGTGTTCCAAGCATTGAACTACGTG...GTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp GATGCTGAAGTCATTGACGAAGAAGAAGAAGTCACTGGTGGGCTGTaGGGCAACTCGCTTCAGCTCCTCAGGGTCAGCATTCTTGATCCC +
Preference number: 5 (lower is better)
Translates to: DAEVIDEEEEVTGGL*GNSLQLLRVSILDP
Trigger: GGGATCAAGAATGCTGACCCTGAGGAGCTGAAGCGAGTTGCCTCACAGCCCACCAGTGACTTCTTCTTCTTCGTCAATGACTTCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 90 bp GGCAGGGAACAGGGGTCATCACTATCCCAAGGAGCTTCAGGGTCCTaGTACTCCTCCACAGAATACTCGGAGTATTCAGAGTACTCATCA +
Preference number: 5 (lower is better)
Translates to: GREQGSSLSQGASGS*YSSTEYSEYSEYSS
Trigger: TGATGAGTACTCTGAATACTCCGAGTATTCTGTGGAGGAGTACCAGGACCCTGAAGCTCCTTGGGATAGTGATGACCCCTGTTCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328333.12
ENST00000466591.1
ENST00000487017.5
ENST00000681320.1
CDS CCA 90 bp AGCAGGGACCCTTCTGGGTACACATACCTTGAAACCTTTGGGTCCTaGAGCCCCTTTCTGACCCTAAGAAAACCCAGCAAACAGCATTTG +
Preference number: 5 (lower is better)
Translates to: SRDPSGYTYLETFGS*SPFLTLRKPSKQHL
Trigger: CAAATGCTGTTTGCTGGGTTTTCTTAGGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTCAAGGTATGTGTACCCAGAAGGGTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462475.1
CDS-3UTR CAA 90 bp CTAGACCCACGGGACCAAGTCACTGAAATAACGGACGTGCACACGCACGCTCACAAGATGCTGAAGTCATaGACGAAGAAGAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LDPRDQVTEITDVHTHAHKMLKS*TKKKKS
Trigger: TGACTTCTTCTTCTTCGTCAATGACTTCAGCATCTT...GTGAGCGTGCGTGTGCACGTCCGTTATTTCAGTGACTTGGTCCCGTGGGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 90 bp AGCACAGAGTTCAGACACGGGCTGAAAATATTCCCAGGGGAGTTCTaGTGTGACCATGAACACATGGGAACTCAGACATGCGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: STEFRHGLKIFPGEF*CDHEHMGTQTCDQE
Trigger: TTCTTGGTCGCATGTCTGAGTTCCCATGTGTTCATGGTCACATCAGAACTCCCCTGGGAATATTTTCAGCCCGTGTCTGAACTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp AGCGGAGGCTGTCCCCTGGCTCTGGACCACCCGGGGTaGGCAGCGGCGCTCGCAGGCCTCACGGGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: SGGCPLALDHPG*AAALAGLTGPK
Trigger: TTTGGGACCCGTGAGGCCTGCGAGCGCCGCTGCCCACCCCGGGTGGTCCAGAGCCAGGGGACAGCCTCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS GCA 72 bp TCTCTCCCTGTGCTGGGCTCGCACTCGGGGCGCCTCTaGCAGGATCCCGGCGCAGAGCGCGGCCACCAGAAG +
Preference number: 6 (lower is better)
Translates to: SLPVLGSHSGRL*QDPGAERGHQK
Trigger: CTTCTGGTGGCCGCGCTCTGCGCCGGGATCCTGGCAGAGGCGCCCCGAGTGCGAGCCCAGCACAGGGAGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CTCCAGGGGTCCCAGGATTCCCGGCGCGGCCAGGGCTaGCTGGACGCCCATCTGCTCCAGGGAAGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: LQGSQDSRRGQG*LDAHLLQGSPS
Trigger: AGAGGGGCTTCCCTGGAGCAGATGGGCGTCCAGGCAGCCCTGGCCGCGCCGGGAATCCTGGGACCCCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp AGCCTCGGTCACCCTTGGGACCGATCAGGCCCTCCTTaGCAGGGGCCCCCGACTGGCCCGGCACACCAGGCT +
Preference number: 6 (lower is better)
Translates to: SLGHPWDRSGPP*QGPPTGPAHQA
Trigger: AGCCTGGTGTGCCGGGCCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp GGCAGTACCTGTCCCCTGGCTCTGGACCACCCGGGGTaGGCAGCGGCGCTCGCAGGCCTCACGGGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: GSTCPLALDHPG*AAALAGLTGPK
Trigger: TTTGGGACCCGTGAGGCCTGCGAGCGCCGCTGCCCACCCCGGGTGGTCCAGAGCCAGGGGACAGGTACTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328333.12
ENST00000465238.5
ENST00000466591.1
ENST00000487017.5
ENST00000681320.1
CDS CAA 72 bp AAGCCTCGGTCACCCTTGGGACCGATCAGGCCCTCCTaGCCAGGGGCCCCCGACTGGCCCGGCACACCAGGC +
Preference number: 6 (lower is better)
Translates to: KPRSPLGPIRPS*PGAPDWPGTPG
Trigger: GCCTGGTGTGCCGGGCCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCGGTCCCAAGGGTGACCGAGGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CAA 72 bp CCGCCCAGGAAGCCCAGGTCCTTCACCTCCGATGACTaGTCCGGGAGCCCCCGGCTCCCCCTTTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: PPRKPRSFTSDD*SGSPRLPLWAS
Trigger: CGAGGCCCAAAGGGGGAGCCGGGGGCTCCCGGACAAGTCATCGGAGGTGAAGGACCTGGGCTTCCTGGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GTGTCGCTGGCTCCAGCCCGTCCAGGTGATAGCTGCTaGGCTCGGGCCCCAGGACCCGGGACTGTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: VSLAPARPGDSC*ARAPGPGTVPG
Trigger: GCCAGGAACAGTCCCGGGTCCTGGGGCCCGAGCTCAGCAGCTATCACCTGGACGGGCTGGAGCCAGCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp TGGCCACCCTCAGGTTGCCAGTGCAGAAGGAAGCCCTaGGCTCTGGGCACCGGCTCCCAGCGCAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: WPPSGCQCRRKP*ALGTGSQRSLS
Trigger: GCTGAGGCTGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCACTGGCAACCTGAGGGTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GCGCACAATGATGCGGTACTGGGTGGCACCAGGGACTaGGCTCCAGGACACTCGCACCCGCTGCCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: AHNDAVLGGTRD*APGHSHPLPGQ
Trigger: CTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGCCACCCAGTACCGCATCATTGTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp TGGGCTCCAGGACACTCGCACCCGCTGCCCGGGCAGCTCGGTGGCTaGCAGGTCTGTTACAGGGCTCACAGGCAGCTCTGGTCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: WAPGHSHPLPGQLGG*QVCYRAHRQLWSSG
Trigger: CCCACTGGACCAGAGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CCAGGGTCCGCTCAACCCCCTGGGTGCTGCGCACAATaGTGCGGTACTGGGTGGCACCAGGGACTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PGSAQPPGCCAQ*CGTGWHQGLGS
Trigger: GGAGCCCAGTCCCTGGTGCCACCCAGTACCGCATCATTGTGCGCAGCACCCAGGGGGTTGAGCGGACCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CTTTCCGCCCAGGAAGCCCAGGTCCTTCACCTCCGATaGCTTGTCCGGGAGCCCCCGGCTCCCCCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: LSAQEAQVLHLR*LVREPPAPPLG
Trigger: GCCCAAAGGGGGAGCCGGGGGCTCCCGGACAAGTCATCGGAGGTGAAGGACCTGGGCTTCCTGGGCGGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GCACCAGGGACTGGGCTCCAGGACACTCGCACCCGCTaGCCGGGCAGCTCGGTGGCTTGCAGGTCTGTTACA +
Preference number: 6 (lower is better)
Translates to: APGTGLQDTRTR*PGSSVACRSVT
Trigger: TGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp ACTCGGTCAGTGGCCGGAGACCCCGCAGCCGCACACTaGTCTCACCAGCTGGGACGTTCACCTCCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: TRSVAGDPAAAH*SHQLGRSPPAA
Trigger: AGCGGCAGGAGGTGAACGTCCCAGCTGGTGAGACCAGTGTGCGGCTGCGGGGTCTCCGGCCACTGACCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CTCCCCGCGCTGCACCACGTGAAGCGTCCCCAGGGCTaGCGGAGCCTCAGGCGGCGTAGTGACAACAATGGA +
Preference number: 6 (lower is better)
Translates to: LPALHHVKRPQG*RSLRRRSDNNG
Trigger: TCCATTGTTGTCACTACGCCGCCTGAGGCTCCGCCAGCCCTGGGGACGCTTCACGTGGTGCAGCGCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CCTCAGGTTGCCAGTGCAGAAGGAAGCCCTGCGCTCTaGGCACCGGCTCCCAGCGCAGCCTCAGCGAGTGCT +
Preference number: 6 (lower is better)
Translates to: PQVASAEGSPAL*APAPSAASASA
Trigger: AGCACTCGCTGAGGCTGCGCTGGGAGCCGGTGCCCAGAGCGCAGGGCTTCCTTCTGCACTGGCAACCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GCTCACCCTTCTGGCCCTGAAGTCCTTCGGGGCCTCTaGGACCAACACTGCCAGGTGGCCCTGGGGGACCAG +
Preference number: 6 (lower is better)
Translates to: AHPSGPEVLRGL*DQHCQVALGDQ
Trigger: CTGGTCCCCCAGGGCCACCTGGCAGTGTTGGTCCCAGAGGCCCCGAAGGACTTCAGGGCCAGAAGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp TTCGGCTGTGGAGTAAGACATACGTACCCGGATGCCTaGCTCCCCACGCTCGCCTCGGGGCCCAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: FGCGVRHTYPDA*LPTLASGPRQP
Trigger: GGGCTGCCTGGGCCCCGAGGCGAGCGTGGGGAGCCAGGCATCCGGGTACGTATGTCTTACTCCACAGCCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS CCA 72 bp GAACCCCAACACGTCCACTCCCGGGTAGAGCAGGCATaGCCACAGGCTGAACGCTGGCAGCCAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: EPQHVHSRVEQA*PQAERWQPGAG
Trigger: CCCTGCCCCTGGCTGCCAGCGTTCAGCCTGTGGCCATGCCTGCTCTACCCGGGAGTGGACGTGTTGGGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CAA 72 bp GGACACTCGCACCCGCTGCCCGGGCAGCTCGGTGGCTaGCAGGTCTGTTACAGGGCTCACAGGCAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GHSHPLPGQLGG*QVCYRAHRQLW
Trigger: CCAGAGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 72 bp CAACTCACCCGCTCCCCTTTCTCGCCCTGGTCACCCTaGGGGCCTGGCTGCCCGTCAAAGCCTCGGTCACCC +
Preference number: 6 (lower is better)
Translates to: QLTRSPFSPWSP*GPGCPSKPRSP
Trigger: GGGTGACCGAGGCTTTGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCGAGAAAGGGGAGCGGGTGAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS GCA 72 bp CCGGAGGTCGGGTCACAGGCACGCCACCAGCAGTCGTaGACACTCTCCGGGAAACGAGGGGCAGTAGTGTCC +
Preference number: 6 (lower is better)
Translates to: PEVGSQARHQQS*TLSGKRGAVVS
Trigger: GGACACTACTGCCCCTCGTTTCCCGGAGAGTGTGCACGACTGCTGGTGGCGTGCCTGTGACCCGACCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GACACTCGCACCCGCTGCCCGGGCAGCTCGGTGGCTTaGAGGTCTGTTACAGGGCTCACAGGCAGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: DTRTRCPGSSVA*RSVTGLTGSSG
Trigger: ACCAGAGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GTCACCCGCTGGGAGCTTGAGATCCCTGGAAGTGTCTaGGGGGACCCAGGCACTTCCTGGCCAGGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: VTRWELEIPGSV*GDPGTSWPGPL
Trigger: CAGAGGCCCTGGCCAGGAAGTGCCTGGGTCCCCGCAGACACTTCCAGGGATCTCAAGCTCCCAGCGGGTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CAGGCCACGGGGGCACACTGGCGTCTGTGTGACAGATaGCTCAGGACCCCGCACACCATCCAGGACAGGCGT +
Preference number: 6 (lower is better)
Translates to: QATGAHWRLCDR*LRTPHTIQDRR
Trigger: ACGCCTGTCCTGGATGGTGTGCGGGGTCCTGAGGCATCTGTCACACAGACGCCAGTGTGCCCCCGTGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GGAGTTCGGCTGTGGAGTAAGACATACGTACCCGGATaGCTGGCTCCCCACGCTCGCCTCGGGGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: GVRLWSKTYVPG*LAPHARLGAQA
Trigger: TGCCTGGGCCCCGAGGCGAGCGTGGGGAGCCAGGCATCCGGGTACGTATGTCTTACTCCACAGCCGAACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS GCA 72 bp TGCCCGCCATCACACTCCTCAGGCCAGGCTCGCCCTTaGCTAGGCCCCGGACTCACATCTTCCCCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: CPPSHSSGQARP*LGPGLTSSPGS
Trigger: AGACCCTGGGGAAGATGTGAGTCCGGGGCCTAGGCAAGGGCGAGCCTGGCCTGAGGAGTGTGATGGCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS GCA 72 bp CTCAGACATGTGCCCCGGCCCAAGAGTGGCCCCTTATaGCCGCCATCACACTCCTCAGGCCAGGCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: LRHVPRPKSGPL*PPSHSSGQARP
Trigger: AGGGCGAGCCTGGCCTGAGGAGTGTGATGGCGGGCATAAGGGGCCACTCTTGGGCCGGGGCACATGTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp TCCAGGACACTCGCACCCGCTGCCCGGGCAGCTCGGTaGCTTGCAGGTCTGTTACAGGGCTCACAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SRTLAPAARAAR*LAGLLQGSQAA
Trigger: AGCTGCCTGTGAGCCCTGTAACAGACCTGCAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp AACTCACCCGCTCCCCTTTCTCGCCCTGGTCACCCTTaGGGCCTGGCTGCCCGTCAAAGCCTCGGTCACCCT +
Preference number: 6 (lower is better)
Translates to: NSPAPLSRPGHP*GLAARQSLGHP
Trigger: AGGGTGACCGAGGCTTTGACGGGCAGCCAGGCCCCAAGGGTGACCAGGGCGAGAAAGGGGAGCGGGTGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS CCA 72 bp CCCTTACCTTCTGGCCCTGAAGTCCTTCGGGGCCTCTaGGACCAACACTGCCAGGTGGCCCTGGGGGACCAG +
Preference number: 6 (lower is better)
Translates to: PLPSGPEVLRGL*DQHCQVALGDQ
Trigger: CTGGTCCCCCAGGGCCACCTGGCAGTGTTGGTCCCAGAGGCCCCGAAGGACTTCAGGGCCAGAAGGTAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS CAA 72 bp CTCCAGGGACGGGTCCCCAGGCCACCCTCACTCGCGTaGCATCTGACACCACAACCCGCAGCCCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: LQGRVPRPPSLA*HLTPQPAALEQ
Trigger: CTGTTCCAGGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGGCCTGGGGACCCGTCCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp TGGCCACCTCGTGGCCCTCCAGCAGAGTGTAGAGTGTaGGGCGGTACTCAGTGCCCGGCTGCAGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: WPPRGPPAECRV*GGTQCPAAAHP
Trigger: TGGATGGGCTGCAGCCGGGCACTGAGTACCGCCTCACACTCTACACTCTGCTGGAGGGCCACGAGGTGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GACGGGTCCCCAGGCCACCCTCACTCGCGTTGCATCTaGCACCACAACCCGCAGCCCTGGAACAGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: DGSPGHPHSRCI*HHNPQPWNSKW
Trigger: CCACTTGCTGTTCCAGGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGGCCTGGGGACCCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp TCCTCACTGGGCCCAGTGGGTCCGTTCGAGCCACGATaGCTGCAGCAGGGCCCTCCTCTCTGCCTCGCAGTA +
Preference number: 6 (lower is better)
Translates to: SSLGPVGPFEPR*LQQGPPLCLAV
Trigger: TACTGCGAGGCAGAGAGGAGGGCCCTGCTGCAGTCATCGTGGCTCGAACGGACCCACTGGGCCCAGTGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp ATACCACGCTCTCCTGGTAGACCCGGGTTGCCGTCCTaGCCCCTCGGTCCAGGCTCTCCCCGGTCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: IPRSPGRPGLPS*PLGPGSPRSPL
Trigger: CAAAGGAGACCGGGGAGAGCCTGGACCGAGGGGTCAGGACGGCAACCCGGGTCTACCAGGAGAGCGTGGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS GCA 72 bp GGGAAGTGGCGGGCCCCACACTGCGGCCAAATAGGGTaGTCACGGTCACCTCATAGTCCGTGCCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: GKWRAPHCGQIG*SRSPHSPCQAP
Trigger: TGGAGCCTGGCACGGACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCACTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp TGGGCAGGGCTCTGGCCGGGGCTGAGTAGTGAAGGATaGCTGACACAGGGCTGTGGCCAGACCACTGACTGC +
Preference number: 6 (lower is better)
Translates to: WAGLWPGLSSEG*LTQGCGQTTDC
Trigger: GCAGTCAGTGGTCTGGCCACAGCCCTGTGTCAGGCATCCTTCACTACTCAGCCCCGGCCAGAGCCCTGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp TTGGGACATGCAGCCCGACTCAGGGGCTCAGACATGTaGCCCGGCCCAAGAGTGGCCCCTTATGCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: LGHAARLRGSDM*PGPRVAPYARH
Trigger: ATGGCGGGCATAAGGGGCCACTCTTGGGCCGGGGCACATGTCTGAGCCCCTGAGTCGGGCTGCATGTCCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp AGCTGGGACGTTCACCTCCTGCCGCTCACTCGGCAGTaGCTGTCCCAGCCCCGTCAGAGGAGTGTACTGGAC +
Preference number: 6 (lower is better)
Translates to: SWDVHLLPLTRQ*LSQPRQRSVLD
Trigger: GTCCAGTACACTCCTCTGACGGGGCTGGGACAGCCACTGCCGAGTGAGCGGCAGGAGGTGAACGTCCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GCACCTGGCACACTCCGCCAGGCCACCAGGAGGCTGTaGGCTGTGGTATTCTGGATGGTCAGTTCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: APGTLRQATRRL*AVVFWMVSSGP
Trigger: AGGGCCGGAACTGACCATCCAGAATACCACAGCCCACAGCCTCCTGGTGGCCTGGCGGAGTGTGCCAGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GCAGCTCTGGTCCAGTGGGAACCACGGTTGCAGGGGTaGCCACCTCGTGGCCCTCCAGCAGAGTGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: AALVQWEPRLQG*PPRGPPAECRV
Trigger: CACTCTACACTCTGCTGGAGGGCCACGAGGTGGCCACCCCTGCAACCGTGGTTCCCACTGGACCAGAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CCGTGGGCCCTGCTCACCCGGAGACCCAGGTTGTCCTaGGAGGCCTGGAGCTCCATCCTCAGAGTCACCTTT +
Preference number: 6 (lower is better)
Translates to: PWALLTRRPRLS*EAWSSILRVTF
Trigger: AAAGGTGACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGTGAGCAGGGCCCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp GGGGTCCAAGGATACCAGGAGCTCCACGCTCACCCTTaGGGCCATCACGACCTTCTCTCCCAGAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: GVQGYQELHAHP*GHHDLLSQRRL
Trigger: CAGGCGCCTCTGGGAGAGAAGGTCGTGATGGCCCCAAGGGTGAGCGTGGAGCTCCTGGTATCCTTGGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp ACAGGCACAGGGAGCCCACACGCGAGTGCAGACATCTaGCTCCACAGACGTGAGTGCGGACACACGGGCGCT +
Preference number: 6 (lower is better)
Translates to: TGTGSPHASADI*LHRRECGHTGA
Trigger: AGCGCCCGTGTGTCCGCACTCACGTCTGTGGAGCCAGATGTCTGCACTCGCGTGTGGGCTCCCTGTGCCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422991.1
ENST00000487017.5
CDS CAA 90 bp ATCCACTGGCTCCAGGGACGGGTCCCCAGGCCACCCTCACTCGCGTaGCATCTGACACCACAACCCGCAGCCCTGGAACAGCAAGTGGAG +
Preference number: 6 (lower is better)
Translates to: IHWLQGRVPRPPSLA*HLTPQPAALEQQVE
Trigger: CTCCACTTGCTGTTCCAGGGCTGCGGGTTGTGGTGTCAGATGCAACGCGAGTGAGGGTGGCCTGGGGACCCGTCCCTGGAGCCAGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GCCCTCGCGGTCCCCGACAAGTGCAGTCACTCGCACTaGGTAGCTGACTCCACCTTCGAGACCCCGGATCTC +
Preference number: 6 (lower is better)
Translates to: ALAVPDKCSHSH*VADSTFETPDL
Trigger: GAGATCCGGGGTCTCGAAGGTGGAGTCAGCTACTCAGTGCGAGTGACTGCACTTGTCGGGGACCGCGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp TGGACAGAGTCCATACCCGGCGCCAAGCGACGCAGCTaGTCTGGGTCCGCTCCAGCCATTCCCAACATCACC +
Preference number: 6 (lower is better)
Translates to: WTESIPGAKRRS*SGSAPAIPNIT
Trigger: GGTGATGTTGGGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGCGCCGGGTATGGACTCTGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GGATGCCTGACACAGGGCTGTGGCCAGACCACTGACTaGCTGGTCCAGGCTTGGCCCATCATCCACGGCGAA +
Preference number: 6 (lower is better)
Translates to: GCLTQGCGQTTD*LVQAWPIIHGE
Trigger: TTCGCCGTGGATGATGGGCCAAGCCTGGACCAGGCAGTCAGTGGTCTGGCCACAGCCCTGTGTCAGGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CGCCAGGCCACCAGGAGGCTGTGGGCTGTGGTATTCTaGATGGTCAGTTCCGGCCCTTCTAGGGCAGTGGTC +
Preference number: 6 (lower is better)
Translates to: RQATRRLWAVVF*MVSSGPSRAVV
Trigger: GACCACTGCCCTAGAAGGGCCGGAACTGACCATCCAGAATACCACAGCCCACAGCCTCCTGGTGGCCTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CACCCCTGGTACGTGCTGGCGGCGCCCAGGAGCATCTaGTGCCAACATGTATCTGTGAGCTGTGACCACGGC +
Preference number: 6 (lower is better)
Translates to: HPWYVLAAPRSI*CQHVSVSCDHG
Trigger: GCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TCCAGGCTTGGCCCATCATCCACGGCGAAGAAGGTCTaGACAGAGTCCATACCCGGCGCCAAGCGACGCAGC +
Preference number: 6 (lower is better)
Translates to: SRLGPSSTAKKV*TESIPGAKRRS
Trigger: GCTGCGTCGCTTGGCGCCGGGTATGGACTCTGTCCAGACCTTCTTCGCCGTGGATGATGGGCCAAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 72 bp CCCGATGCTGTTGGCGTAGAGGGCAATCACAGTCACTaGGTACTCGGTCAGTGGCCGGAGACCCCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: PDAVGVEGNHSH*VLGQWPETPQP
Trigger: CGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CACAGCCTCCCCGATGCTGTTGGCGTAGAGGGCAATCACAGTCACTaGGTACTCGGTCAGTGGCCGGAGACCCCGCAGCCGCACACTGGT +
Preference number: 6 (lower is better)
Translates to: HSLPDAVGVEGNHSH*VLGQWPETPQPHTG
Trigger: ACCAGTGTGCGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CAGCTGTGTCCACCAGGTCCTGGGACTTCCCGTCTGTaGTCAGGATGCAGACCTTGGGGACACCAGGTCGGG +
Preference number: 6 (lower is better)
Translates to: QLCPPGPGTSRL*SGCRPWGHQVG
Trigger: CCCGACCTGGTGTCCCCAAGGTCTGCATCCTGATCACAGACGGGAAGTCCCAGGACCTGGTGGACACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp ACGGATGGCGCGGATCACATCACCCCCAGAGCCAAGTaGATCCAGGCCGAACTCTGTCCGTGGGTCATCGCT +
Preference number: 6 (lower is better)
Translates to: TDGADHITPRAK*IQAELCPWVIA
Trigger: AGCGATGACCCACGGACAGAGTTCGGCCTGGATGCACTTGGCTCTGGGGGTGATGTGATCCGCGCCATCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CAGTGCGAGCCATCAGGGAAGTGGCGGGCCCCACACTaGGGCCAAATAGGGTGCTCACGGTCACCTCATAGT +
Preference number: 6 (lower is better)
Translates to: QCEPSGKWRAPH*GQIGCSRSPHS
Trigger: ACTATGAGGTGACCGTGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTCGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp ATGGATGTGGGGCCCAGGATGACCGGGCGCAGGGTCTaGTCAACAGAAGCGTCAGTGCGAGCCATCAGGGAA +
Preference number: 6 (lower is better)
Translates to: MDVGPRMTGRRV*STEASVRAIRE
Trigger: TTCCCTGATGGCTCGCACTGACGCTTCTGTTGAGCAGACCCTGCGCCCGGTCATCCTGGGCCCCACATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GGGGGCCCATCCACGCCAGCCACATGGGCCCTCACATaGACCGTATACTCAGTATCTGGCTCCAGTCCATCC +
Preference number: 6 (lower is better)
Translates to: GGPSTPATWALT*TVYSVSGSSPS
Trigger: GGATGGACTGGAGCCAGATACTGAGTATACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGATGGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp ATCTCTGCAGAGTCTGTGTTTCCTGGGAGTATCTGGTaGCTCATGGGGCCGCCTTCACTCCGGCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: ISAESVFPGSIW*LMGPPSLRPQA
Trigger: GGCCTGGGGCCGGAGTGAAGGCGGCCCCATGAGGCACCAGATACTCCCAGGAAACACAGACTCTGCAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CCCTGGTACGTGCTGGCGGCGCCCAGGAGCATCTGGTaGCAACATGTATCTGTGAGCTGTGACCACGGCTGT +
Preference number: 6 (lower is better)
Translates to: PWYVLAAPRSIW*QHVSVSCDHGC
Trigger: ACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CCCGGGGCAAGGTGGGCAGCACTGATTTCCACTGTGTaGACACAGTGCCCATGCGTGTGCCCTGCATGCAGA +
Preference number: 6 (lower is better)
Translates to: PGARWAALISTV*TQCPCVCPACR
Trigger: TCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAGTGCTGCCCACCTTGCCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS CCA 72 bp GTAGAGGGCAATCACAGTCACTTGGTACTCGGTCAGTaGCCGGAGACCCCGCAGCCGCACACTGGTCTCACC +
Preference number: 6 (lower is better)
Translates to: VEGNHSHLVLGQ*PETPQPHTGLT
Trigger: GGTGAGACCAGTGTGCGGCTGCGGGGTCTCCGGCCACTGACCGAGTACCAAGTGACTGTGATTGCCCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp AGGCCACCAGGAGGCTGTGGGCTGTGGTATTCTGGATaGTCAGTTCCGGCCCTTCTAGGGCAGTGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: RPPGGCGLWYSG*SVPALLGQWSE
Trigger: CTCGGACCACTGCCCTAGAAGGGCCGGAACTGACCATCCAGAATACCACAGCCCACAGCCTCCTGGTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GCTCAACAGAAGCGTCAGTGCGAGCCATCAGGGAAGTaGCGGGCCCCACACTGCGGCCAAATAGGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: AQQKRQCEPSGK*RAPHCGQIGCS
Trigger: TGAGCACCCTATTTGGCCGCAGTGTGGGGCCCGCCACTTCCCTGATGGCTCGCACTGACGCTTCTGTTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp ACCACAGAGGCAGGGGGCCCATCCACGCCAGCCACATaGGCCCTCACATGCACCGTATACTCAGTATCTGGC +
Preference number: 6 (lower is better)
Translates to: TTEAGGPSTPAT*ALTCTVYSVSG
Trigger: GCCAGATACTGAGTATACGGTGCATGTGAGGGCCCATGTGGCTGGCGTGGATGGGCCCCCTGCCTCTGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TTGATGCCTGGCACACCCCTGTCTCCTTTGGGACCTTaGTCACCATTGCTGCCCGGCTCCCCCTTAGCACCC +
Preference number: 6 (lower is better)
Translates to: LMPGTPLSPLGP*SPLLPGSPLAP
Trigger: GGGTGCTAAGGGGGAGCCGGGCAGCAATGGTGACCAAGGTCCCAAAGGAGACAGGGGTGTGCCAGGCATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp GCAGGAGCCCTCATCCAGTGGCAGGGAACAGGGGTCTaGGCCAATGGGGTCAAGTCAGCAGGGTTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: AGALIQWQGTGV*ANGVKSAGFVG
Trigger: TCCCACAAACCCTGCTGACTTGACCCCATTGGCCCAGACCCCTGTTCCCTGCCACTGGATGAGGGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465238.5
CDS CCA 72 bp GCCCCCAGAGCTCAGAGTGTGGAAGCCGACAGTGTGTaGCTCCCTGTGATCCAGAGAGCAGGCTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: APRAQSVEADSV*LPVIQRAGSWM
Trigger: CATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACTGTCGGCTTCCACACTCTGAGCTCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CAA 72 bp GGCACACCCCTGTCTCCTTTGGGACCTTGGTCACCATaGCTGCCCGGCTCCCCCTTAGCACCCTTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: GTPLSPLGPWSP*LPGSPLAPLSP
Trigger: TGGACTCAAGGGTGCTAAGGGGGAGCCGGGCAGCAATGGTGACCAAGGTCCCAAAGGAGACAGGGGTGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CAA 72 bp GGGCCTCAGTCCTGGGCAGTACCTGGTGAGGACAGGTaGGAAACGGTCGTCAGCCATCTGACCTTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: GPQSWAVPGEDR*ETVVSHLTFPG
Trigger: TCCGGGGAAGGTCAGATGGCTGACGACCGTTTCCAACCTGTCCTCACCAGGTACTGCCCAGGACTGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS CAA 90 bp GCCAGTCACAGGGCCACTGGCCGCTGTCCACTGTACTCTCAAGGATaGGCTGCTTGGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: ASHRATGRCPLYSQG*AAWLRQHQVSWSRG
Trigger: ACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CCAGTGACCCCTACCCAGGTGATCCGTAGAACGTCGCTGGAAGCATaGAGGATCTGCAGCCTCGACACACGACCCACAGGCTCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: PVTPTQVIRRTSLEA*RICSLDTRPTGSGA
Trigger: TGCCCCTGAGCCTGTGGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGTTCTACGGATCACCTGGGTAGGGGTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp AGTTCCAGGAAAGGAGGATGGATGTGGGGCCCAGGATaGCCGGGCGCAGGGTCTGCTCAACAGAAGCGTCAG +
Preference number: 6 (lower is better)
Translates to: SSRKGGWMWGPG*PGAGSAQQKRQ
Trigger: CTGACGCTTCTGTTGAGCAGACCCTGCGCCCGGTCATCCTGGGCCCCACATCCATCCTCCTTTCCTGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GGCGCCAGGAACCCTGGTCCAGGTAATGGTGACAGATaGGCTGCTGGCCTGAGTCACATGGACCGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GARNPGPGNGDR*AAGLSHMDRPH
Trigger: GTGAGGACGGTCCATGTGACTCAGGCCAGCAGCTCATCTGTCACCATTACCTGGACCAGGGTTCCTGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CGGCGCCCAGGAGCATCTGGTGCCAACATGTATCTGTaGGCTGTGACCACGGCTGTGCCCAGGTTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: RRPGASGANMYL*AVTTAVPRLFP
Trigger: TGGGAACAACCTGGGCACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTGGGCGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CAGGGAGAGGGTCCATGTGAGGTCAGAGGAGGTCAGTaGGGGACCAAAGAGAATCGCCCGGGTCACCAGGGA +
Preference number: 6 (lower is better)
Translates to: QGEGPCEVRGGQ*GTKENRPGHQG
Trigger: TCCCTGGTGACCCGGGCGATTCTCTTTGGTCCCTCACTGACCTCCTCTGACCTCACATGGACCCTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467985.1
CDS GCA 72 bp ATCGCTGTACTGCACTGTGGCAAAGCGCACACCCTGTaGACTGGCTGCTCCAGAGAAAGGCAGCACCAGCCC +
Preference number: 6 (lower is better)
Translates to: IAVLHCGKAHTL*TGCSRERQHQP
Trigger: GGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CAGTGGTCCGAGCTGTCCCGCTCACAGCCTCCCCGATaGTGTTGGCGTAGAGGGCAATCACAGTCACTTGGT +
Preference number: 6 (lower is better)
Translates to: QWSELSRSQPPR*CWRRGQSQSLG
Trigger: ACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGAGCGGGACAGCTCGGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GGTTCATCCACTAGCAGAACCATCACCCCTGGTACGTaGTGGCGGCGCCCAGGAGCATCTGGTGCCAACATG +
Preference number: 6 (lower is better)
Translates to: GSSTSRTITPGT*WRRPGASGANM
Trigger: CATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGATGGTTCTGCTAGTGGATGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CACAGCCACCATAGACAAAAGGGTGACAGGCCTCTGTaGTGCCTGTCACAGCCCGATGGTACCAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: HSHHRQKGDRPL*CLSQPDGTSAG
Trigger: CCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTCACCCTTTTGTCTATGGTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328333.12
ENST00000465238.5
ENST00000466591.1
ENST00000470076.1
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp CGAACTCTGTCCGTGGGTCATCGCTGTACTGCACTGTaGCAAAGCGCACACCCTGTGCACTGGCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RTLSVGHRCTAL*QSAHPVHWLLQ
Trigger: CTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACAGCGATGACCCACGGACAGAGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp ACAGCAAATAGCTTGACCCCCTGCCCCTTCAGCCTTTaGGCAGCTGTGTCCACCAGGTCCTGGGACTTCCCG +
Preference number: 6 (lower is better)
Translates to: TANSLTPCPFSL*AAVSTRSWDFP
Trigger: CGGGAAGTCCCAGGACCTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TCCGAGCTGTCCCGCTCACAGCCTCCCCGATGCTGTTaGCGTAGAGGGCAATCACAGTCACTTGGTACTCGG +
Preference number: 6 (lower is better)
Translates to: SELSRSQPPRCC*RRGQSQSLGTR
Trigger: CCGAGTACCAAGTGACTGTGATTGCCCTCTACGCCAACAGCATCGGGGAGGCTGTGAGCGGGACAGCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp AGAGTCCATACCCGGCGCCAAGCGACGCAGCTGCTCTaGGTCCGCTCCAGCCATTCCCAACATCACCACATT +
Preference number: 6 (lower is better)
Translates to: RVHTRRQATQLL*VRSSHSQHHHI
Trigger: AATGTGGTGATGTTGGGAATGGCTGGAGCGGACCCAGAGCAGCTGCGTCGCTTGGCGCCGGGTATGGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CCCTTTCTGACCCATAGACAGGTGGGAGTTCAGGCATaGCACAGGCACAGGGAGCCCACACGCGAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: PFLTHRQVGVQA*HRHREPTRECR
Trigger: TCTGCACTCGCGTGTGGGCTCCCTGTGCCTGTGCCATGCCTGAACTCCCACCTGTCTATGGGTCAGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422991.1
CDS CCA 72 bp CGGGGTCCCTCCTGGCCGGGGCGGCCATCTTCACCCTaGATGGTGACATTAGGTTCATTGACTCAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: RGPSWPGRPSSP*MVTLGSLTQRL
Trigger: CAACCTCTGAGTCAATGAACCTAATGTCACCATCCAGGGTGAAGATGGCCGCCCCGGCCAGGAGGGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS CCA 72 bp AGTGTGTGGCTCCCTGTGATCCAGAGAGCAGGCTCCTaGATGTTGGGACATGCAGCCCGACTCAGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: SVWLPVIQRAGS*MLGHAARLRGS
Trigger: TGAGCCCCTGAGTCGGGCTGCATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CAA 72 bp AGGGCCACTGGCCGCTGTCCACTGTACTCTCAAGGATaGGCTGCTTGGCTCAGACAGCACCAGGTCTCGTGG +
Preference number: 6 (lower is better)
Translates to: RATGRCPLYSQG*AAWLRQHQVSW
Trigger: CCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CAGGGCCACTGGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGCTaGGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGGTCGAGTCAT +
Preference number: 6 (lower is better)
Translates to: QGHWPLSTVLSRIGC*AQTAPGLVEQRSSH
Trigger: ATGACTCGACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAAGCTaGGGACCTCGCGGAAATTGCTGCGGCCAATGGATG +
Preference number: 6 (lower is better)
Translates to: LQRKAAPALRES*GPRGNCCGQWM
Trigger: CATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp CTGCACTGTGGCAAAGCGCACACCCTGTGCACTGGCTaGTCCAGAGAAAGGCAGCACCAGCCCTTCGAGAAA +
Preference number: 6 (lower is better)
Translates to: LHCGKAHTLCTG*SRERQHQPFEK
Trigger: TTTCTCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GTGATCCGTAGAACGTCGCTGGAAGCATTGAGGATCTaGAGCCTCGACACACGACCCACAGGCTCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: VIRRTSLEALRI*SLDTRPTGSGA
Trigger: TGCCCCTGAGCCTGTGGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGTTCTACGGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp AGCCACCATAGACAAAAGGGTGACAGGCCTCTGTGCTaGCTGTCACAGCCCGATGGTACCAGCGCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: SHHRQKGDRPLC*LSQPDGTSAGC
Trigger: ACACCCTGCGCTGGTACCATCGGGCTGTGACAGGCAGCACAGAGGCCTGTCACCCTTTTGTCTATGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000328333.12
ENST00000465238.5
ENST00000466591.1
ENST00000470076.1
ENST00000487017.5
ENST00000681320.1
CDS GCA 72 bp CTGATTTCCACTGTGTGCACACAGTGCCCATGCGTGTaGCCTGCATGCAGACCCTACGTGCTTGGCGTGTGC +
Preference number: 6 (lower is better)
Translates to: LISTVCTQCPCV*PACRPYVLGVC
Trigger: GCACACGCCAAGCACGTAGGGTCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS GCA 72 bp AGGTGGGCAGCACTGATTTCCACTGTGTGCACACAGTaGCCATGCGTGTGCCCTGCATGCAGACCCTACGTG +
Preference number: 6 (lower is better)
Translates to: RWAALISTVCTQ*PCVCPACRPYV
Trigger: CACGTAGGGTCTGCATGCAGGGCACACGCATGGGCACTGTGTGCACACAGTGGAAATCAGTGCTGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466591.1
CDS CCA 72 bp TGTACTGCACTGTGGCAAAGCGCACACCCTGTGCACTaGCTGCTCCAGAGAAAGGCAGCACCAGCCCTTCGA +
Preference number: 6 (lower is better)
Translates to: CTALWQSAHPVH*LLQRKAAPALR
Trigger: TCGAAGGGCTGGTGCTGCCTTTCTCTGGAGCAGCCAGTGCACAGGGTGTGCGCTTTGCCACAGTGCAGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CCCTTCAGCCTTTGGGCAGCTGTGTCCACCAGGTCCTaGGACTTCCCGTCTGTGATCAGGATGCAGACCTTG +
Preference number: 6 (lower is better)
Translates to: PFSLWAAVSTRS*DFPSVIRMQTL
Trigger: CAAGGTCTGCATCCTGATCACAGACGGGAAGTCCCAGGACCTGGTGGACACAGCTGCCCAAAGGCTGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGCTTaGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: GRCPLYSQGLAA*LRQHQVSWSRG
Trigger: ACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CAGTATCTGGCTCCAGTCCATCCAGCTCAGCCACCGTaGCCTCCCCAGAAACCAACTGGGATTTCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: QYLAPVHPAQPP*PPQKPTGISLG
Trigger: GCCCAGAGAAATCCCAGTTGGTTTCTGGGGAGGCCACGGTGGCTGAGCTGGATGGACTGGAGCCAGATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 72 bp TGGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGCTaGGCTCAGACAGCACCAGGTCTCGTGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: WPLSTVLSRIGC*AQTAPGLVEQR
Trigger: CCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 72 bp CCTACCCAGGTGATCCGTAGAACGTCGCTGGAAGCATaGAGGATCTGCAGCCTCGACACACGACCCACAGGC +
Preference number: 6 (lower is better)
Translates to: PTQVIRRTSLEA*RICSLDTRPTG
Trigger: GCCTGTGGGTCGTGTGTCGAGGCTGCAGATCCTCAATGCTTCCAGCGACGTTCTACGGATCACCTGGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp TCATTATCTGGGCCTCAGTCCTGGGCAGTACCTGGTGAGGACAGGTaGGAAACGGTCGTCAGCCATCTGACCTTCCCCGGAGACGCTCAG +
Preference number: 6 (lower is better)
Translates to: SLSGPQSWAVPGEDR*ETVVSHLTFPGDAQ
Trigger: CTGAGCGTCTCCGGGGAAGGTCAGATGGCTGACGACCGTTTCCAACCTGTCCTCACCAGGTACTGCCCAGGACTGAGGCCCAGATAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS TCA 72 bp GGACCCCAGCAGGGACCCTTCTGGGTACACATACCTTaGAACCTTTGGGTCCTGGAGCCCCTTTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: GPQQGPFWVHIP*NLWVLEPLSDP
Trigger: AGGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTCAAGGTATGTGTACCCAGAAGGGTCCCTGCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462475.1
CDS TCA 72 bp CTCAGAGTGTGGAAGCCGACAGTGTGTGGCTCCCTGTaGTCCAGAGAGCAGGCTCCTGGATGTTGGGACATG +
Preference number: 6 (lower is better)
Translates to: LRVWKPTVCGSL*SREQAPGCWDM
Trigger: CATGTCCCAACATCCAGGAGCCTGCTCTCTGGATCACAGGGAGCCACACACTGTCGGCTTCCACACTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS GCA 72 bp CCAGCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATTaGTGCGGCCAATGGATGAGGAGCCATCCAGTAAGA +
Preference number: 6 (lower is better)
Translates to: PALRESCGPRGN*CGQWMRSHPVR
Trigger: TCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp GCATTCTTGATCCCCACAGCAAATAGCTTGACCCCCTaGCCCTTCAGCCTTTGGGCAGCTGTGTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: AFLIPTANSLTP*PFSLWAAVSTR
Trigger: CCTGGTGGACACAGCTGCCCAAAGGCTGAAGGGGCAGGGGGTCAAGCTATTTGCTGTGGGGATCAAGAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GAGTGTACTGGACCTTGTAGCCAGTCACAGGGCCACTaGCCGCTGTCCACTGTACTCTCAAGGATTGGCTGC +
Preference number: 6 (lower is better)
Translates to: ECTGPCSQSQGH*PLSTVLSRIGC
Trigger: GCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTGGCTACAAGGTCCAGTACACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TTCGAGACCCCGGATCTCTGCAGAGTCTGTGTTTCCTaGGAGTATCTGGTGCCTCATGGGGCCGCCTTCACT +
Preference number: 6 (lower is better)
Translates to: FETPDLCRVCVS*EYLVPHGAAFT
Trigger: AGTGAAGGCGGCCCCATGAGGCACCAGATACTCCCAGGAAACACAGACTCTGCAGAGATCCGGGGTCTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TCATCCACTAGCAGAACCATCACCCCTGGTACGTGCTaGCGGCGCCCAGGAGCATCTGGTGCCAACATGTAT +
Preference number: 6 (lower is better)
Translates to: SSTSRTITPGTC*RRPGASGANMY
Trigger: ATACATGTTGGCACCAGATGCTCCTGGGCGCCGCCAGCACGTACCAGGGGTGATGGTTCTGCTAGTGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CTGCTCACCCGGAGACCCAGGTTGTCCTGGGAGGCCTaGAGCTCCATCCTCAGAGTCACCTTTTTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: LLTRRPRLSWEA*SSILRVTFFSF
Trigger: AAAGGAGAAAAAGGTGACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328333.12
ENST00000487017.5
ENST00000681320.1
CDS CCA 72 bp TCAGAGGCAAGAGCTGGGATGAAGGGAGTTCGGCTGTaGAGTAAGACATACGTACCCGGATGCCTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SEARAGMKGVRL*SKTYVPGCLAP
Trigger: GGGAGCCAGGCATCCGGGTACGTATGTCTTACTCCACAGCCGAACTCCCTTCATCCCAGCTCTTGCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS CCA 72 bp CTCAGATACTACCATAGACAGGTGGGAGTTCAGGCATaGCACAGGCACAGGGAGCCCACACGCGAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: LRYYHRQVGVQA*HRHREPTRECR
Trigger: TCTGCACTCGCGTGTGGGCTCCCTGTGCCTGTGCCATGCCTGAACTCCCACCTGTCTATGGTAGTATCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CAA 72 bp ACCAGCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATaGCTGCGGCCAATGGATGAGGAGCCATCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: TSPSRKLRTSRK*LRPMDEEPSSK
Trigger: CTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CAGGAGCATCTGGTGCCAACATGTATCTGTGAGCTGTaGCCACGGCTGTGCCCAGGTTGTTCCCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: QEHLVPTCICEL*PRLCPGCSHLG
Trigger: ACCCAAGTGGGAACAACCTGGGCACAGCCGTGGTCACAGCTCACAGATACATGTTGGCACCAGATGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp CTCATTATCTGGGCCTCAGTCCTGGGCAGTACCTGGTaGGGACAGGTTGGAAACGGTCGTCAGCCATCTGAC +
Preference number: 6 (lower is better)
Translates to: LIIWASVLGSTW*GQVGNGRQPSD
Trigger: GTCAGATGGCTGACGACCGTTTCCAACCTGTCCTCACCAGGTACTGCCCAGGACTGAGGCCCAGATAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470076.1
CDS TCA 72 bp GACCTCCCTCAGCTCTGGAACCTCCCTGAACTCCCATaGGCTCCCTGGCCTAATGCCCAAACCTTCTGTAAC +
Preference number: 6 (lower is better)
Translates to: DLPQLWNLPELP*APWPNAQTFCN
Trigger: GTTACAGAAGGTTTGGGCATTAGGCCAGGGAGCTCATGGGAGTTCAGGGAGGTTCCAGAGCTGAGGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474432.1
CDS GCA 72 bp GCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATTGCTaGGGCCAATGGATGAGGAGCCATCCAGTAAGAACA +
Preference number: 6 (lower is better)
Translates to: ALRESCGPRGNC*GQWMRSHPVRT
Trigger: TGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS GCA 72 bp TCCTGGGATCTGGGAGATCAGACCAGAGCACACGTGTaGCCAGATGTGGTGAGAAACAGACCAAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: SWDLGDQTRAHV*PDVVRNRPRMG
Trigger: GCCCATCCTTGGTCTGTTTCTCACCACATCTGGGCACACGTGTGCTCTGGTCTGATCTCCCAGATCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp AATGCCAAGGTCATGGGAGCCATTCAGTGGGAACAGTaGGGAGGGCCGATGACTGTAAGACAGCAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: NAKVMGAIQWEQ*GGPMTVRQQAN
Trigger: GTTGGCCTGCTGTCTTACAGTCATCGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCATGACCTTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp AGCTGTGACCACGGCTGTGCCCAGGTTGTTCCCACTTaGGTCCATGTAGGGCATGTCACGGATCCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: SCDHGCAQVVPT*VHVGHVTDPLQ
Trigger: TTGCAAAGGATCCGTGACATGCCCTACATGGACCCAAGTGGGAACAACCTGGGCACAGCCGTGGTCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp AAAGGCAGCACCAGCCCTTCGAGAAAGCTGCGGACCTCGCGGAAATaGCTGCGGCCAATGGATGAGGAGCCATCCAGTAAGAACACAATG +
Preference number: 6 (lower is better)
Translates to: KGSTSPSRKLRTSRK*LRPMDEEPSSKNTM
Trigger: CATTGTGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTCTCGAAGGGCTGGTGCTGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp GACCAAGGAGAGGTTCACAAGAACTCAGGTGTGTCCTaGGATCTGGGAGATCAGACCAGAGCACACGTGTGC +
Preference number: 6 (lower is better)
Translates to: DQGEVHKNSGVS*DLGDQTRAHVC
Trigger: GCACACGTGTGCTCTGGTCTGATCTCCCAGATCCCAGGACACACCTGAGTTCTTGTGAACCTCTCCTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp CCCGACTCCTGGGTCACCCTTGAAACCTTTGGGTCCTaGAGCCCCTTTCTGACCCTAAGAAAACCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: PDSWVTLETFGS*SPFLTLRKPSK
Trigger: TTTGCTGGGTTTTCTTAGGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTCAAGGGTGACCCAGGAGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CAA 72 bp AGTCGATCGAGGTGTCCACCACACGTAGTTCAATGCTaGGAACACGAGGTGACTCAGTGCGCGCAGTCACCT +
Preference number: 6 (lower is better)
Translates to: SRSRCPPHVVQC*EHEVTQCAQSP
Trigger: AGGTGACTGCGCGCACTGAGTCACCTCGTGTTCCAAGCATTGAACTACGTGTGGTGGACACCTCGATCGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CTCCGGGAAACGAGGGGCAGTAGTGTCCTCAAGATGCTGAAGTCATaGACGAAGAAGAAGAAGTCACTGGTGGGCTGTGAGGCAACTCGC +
Preference number: 6 (lower is better)
Translates to: LRETRGSSVLKMLKS*TKKKKSLVGCEATR
Trigger: GCGAGTTGCCTCACAGCCCACCAGTGACTTCTTCTTCTTCGTCAATGACTTCAGCATCTTGAGGACACTACTGCCCCTCGTTTCCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GAGATCAGACCAGAGCACACGTGTGCCCAGATGTGGTaGGAAACAGACCAAGGATGGGCACACAGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: EIRPEHTCAQMW*ETDQGWAHRSQ
Trigger: TTGGCTTCTGTGTGCCCATCCTTGGTCTGTTTCTCACCACATCTGGGCACACGTGTGCTCTGGTCTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS TCA 72 bp CATGCGACCAAGAATTGGCTCACAGGAGCTCAGACATaGCCATGGCCTATCTCAGGACAGCACAGACAGAGG +
Preference number: 6 (lower is better)
Translates to: HATKNWLTGAQT*PWPISGQHRQR
Trigger: CCTCTGTCTGTGCTGTCCTGAGATAGGCCATGGTCATGTCTGAGCTCCTGTGAGCCAATTCTTGGTCGCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp GAAAGCTGCGGACCTCGCGGAAATTGCTGCGGCCAATaGATGAGGAGCCATCCAGTAAGAACACAATGTCAG +
Preference number: 6 (lower is better)
Translates to: ESCGPRGNCCGQ*MRSHPVRTQCQ
Trigger: CTGACATTGTGTTCTTACTGGATGGCTCCTCATCCATTGGCCGCAGCAATTTCCGCGAGGTCCGCAGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp ATGTCACGGATCCTTTGCAAGATAATGCCAAGGTCATaGGAGCCATTCAGTGGGAACAGTGGGGAGGGCCGA +
Preference number: 6 (lower is better)
Translates to: MSRILCKIMPRS*EPFSGNSGEGR
Trigger: TCGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCATGACCTTGGCATTATCTTGCAAAGGATCCGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS TCA 72 bp GTCATTGACGAAGAAGAAGAAGTCACTGGTGGGCTGTaGGGCAACTCGCTTCAGCTCCTCAGGGTCAGCATT +
Preference number: 6 (lower is better)
Translates to: VIDEEEEVTGGL*GNSLQLLRVSI
Trigger: AATGCTGACCCTGAGGAGCTGAAGCGAGTTGCCTCACAGCCCACCAGTGACTTCTTCTTCTTCGTCAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp TTGCAAGATAATGCCAAGGTCATGGGAGCCATTCAGTaGGAACAGTGGGGAGGGCCGATGACTGTAAGACAG +
Preference number: 6 (lower is better)
Translates to: LQDNAKVMGAIQ*EQWGGPMTVRQ
Trigger: CTGTCTTACAGTCATCGGCCCTCCCCACTGTTCCCACTGAATGGCTCCCATGACCTTGGCATTATCTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CCA 72 bp CAGGGGTCATCACTATCCCAAGGAGCTTCAGGGTCCTaGTACTCCTCCACAGAATACTCGGAGTATTCAGAG +
Preference number: 6 (lower is better)
Translates to: QGSSLSQGASGS*YSSTEYSEYSE
Trigger: CTCTGAATACTCCGAGTATTCTGTGGAGGAGTACCAGGACCCTGAAGCTCCTTGGGATAGTGATGACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328333.12
ENST00000466591.1
ENST00000487017.5
ENST00000681320.1
CDS CAA 72 bp CCCACTTGGGTCCATGTAGGGCATGTCACGGATCCTTaGCAAGATAATGCCAAGGTCATGGGAGCCATTCAG +
Preference number: 6 (lower is better)
Translates to: PTWVHVGHVTDP*QDNAKVMGAIQ
Trigger: CTGAATGGCTCCCATGACCTTGGCATTATCTTGCAAAGGATCCGTGACATGCCCTACATGGACCCAAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CAGGTTGTTCCCACTTGGGTCCATGTAGGGCATGTCACGGATCCTTaGCAAGATAATGCCAAGGTCATGGGAGCCATTCAGTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: QVVPTWVHVGHVTDP*QDNAKVMGAIQWEQ
Trigger: CTGTTCCCACTGAATGGCTCCCATGACCTTGGCATTATCTTGCAAAGGATCCGTGACATGCCCTACATGGACCCAAGTGGGAACAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 90 bp CCATCTTCACCCTGGATGGTGACATTAGGTTCATTGACTCAGAGGTaGGAAATCAGAGGCAAGAGCTGGGATGAAGGGAGTTCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PSSPWMVTLGSLTQR*EIRGKSWDEGSSAV
Trigger: CACAGCCGAACTCCCTTCATCCCAGCTCTTGCCTCTGATTTCCAACCTCTGAGTCAATGAACCTAATGTCACCATCCAGGGTGAAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS CAA 72 bp ACGAGGGGCAGTAGTGTCCTCAAGATGCTGAAGTCATaGACGAAGAAGAAGAAGTCACTGGTGGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: TRGSSVLKMLKS*TKKKKSLVGCE
Trigger: CTCACAGCCCACCAGTGACTTCTTCTTCTTCGTCAATGACTTCAGCATCTTGAGGACACTACTGCCCCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328333.12
ENST00000681320.1
CDS CAA 72 bp CCCTGGATGGTGACATTAGGTTCATTGACTCAGAGGTaGGAAATCAGAGGCAAGAGCTGGGATGAAGGGAGT +
Preference number: 6 (lower is better)
Translates to: PWMVTLGSLTQR*EIRGKSWDEGS
Trigger: ACTCCCTTCATCCCAGCTCTTGCCTCTGATTTCCAACCTCTGAGTCAATGAACCTAATGTCACCATCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459756.5
ENST00000467985.1
CDS TCA 72 bp TTCAGACACGGGCTGAAAATATTCCCAGGGGAGTTCTaGTGTGACCATGAACACATGGGAACTCAGACATGC +
Preference number: 6 (lower is better)
Translates to: FRHGLKIFPGEF*CDHEHMGTQTC
Trigger: GCATGTCTGAGTTCCCATGTGTTCATGGTCACATCAGAACTCCCCTGGGAATATTTTCAGCCCGTGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487017.5
CDS CCA 72 bp TATTCCCAGGGGAGTTCTGATGTGACCATGAACACATaGGAACTCAGACATGCGACCAAGAATTGGCTCACA +
Preference number: 6 (lower is better)
Translates to: YSQGSSDVTMNT*ELRHATKNWLT
Trigger: TGTGAGCCAATTCTTGGTCGCATGTCTGAGTTCCCATGTGTTCATGGTCACATCAGAACTCCCCTGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487017.5