RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL24A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171502

Ensembl transcript IDs: ENST00000370571.7, ENST00000426639.5, ENST00000473734.1, ENST00000485434.1, ENST00000496682.2

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTGGTTCACCCCGTAAACCTGGTTCCCCAGTTCCTCCAACACTaGCAGCAGTTCCAACATCTCCCTTTGCACCTGGTTCACCTTGCA +
Preference number: 1 (lower is better)
Translates to: LLVHPVNLVPQFLQH*QQFQHLPLHLVHLA
Trigger: TGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGAACTGCTGGCAGTGTTGGAGGAACTGGGGAACCAGGTTTACGGGGTGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 90 bp CTGCCCTTTCAGGCCAGGGTCTCCACATGGTCCTTGATCACCTTGTaGTCCTCGGTGACCTCTTTTACCTTGAATTCCAGGTTGACCAGG +
Preference number: 1 (lower is better)
Translates to: LPFQARVSTWSLITL*SSVTSFTLNSRLTR
Trigger: CCTGGTCAACCTGGAATTCAAGGTAAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGACCCTGGCCTGAAAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CCA 90 bp AACACCATATTCTCCAGGCTGCCCTTTCAGGCCAGGGTCTCCACATaGTCCTTGATCACCTTGTGCTCCTCGGTGACCTCTTTTACCTTG +
Preference number: 1 (lower is better)
Translates to: NTIFSRLPFQARVST*SLITLCSSVTSFTL
Trigger: CAAGGTAAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGACCCTGGCCTGAAAGGGCAGCCTGGAGAATATGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR TCA 90 bp AAGGGGACCAGTGTTTCCTCTGTGTCCAATAGGACCTTTAGGACCTaGTATCCCAACAATGCCAGCATCCCCTTCAGGACCTTTAGGGCC +
Preference number: 1 (lower is better)
Translates to: KGTSVSSVSNRTFRT*YPNNASIPFRTFRA
Trigger: GGCCCTAAAGGTCCTGAAGGGGATGCTGGCATTGTTGGGATATCAGGTCCTAAAGGTCCTATTGGACACAGAGGAAACACTGGTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 90 bp CAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCTCTaGATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAAT +
Preference number: 1 (lower is better)
Translates to: QCTSGSISQYCSIVL*ISSCLMGTTHSVKN
Trigger: ATTTTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR TCA 90 bp ACTTTGTTACAGAAACAGGAGGTAAGCATGTCTGGCCACCAGCACTaGAATTGCAGAAAACCTCAATGGCATCTGAAGGACAGCCAAGAT +
Preference number: 1 (lower is better)
Translates to: TLLQKQEVSMSGHQH*NCRKPQWHLKDSQD
Trigger: ATCTTGGCTGTCCTTCAGATGCCATTGAGGTTTTCTGCAATTTCAGTGCTGGTGGCCAGACATGCTTACCTCCTGTTTCTGTAACAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 90 bp ATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACG +
Preference number: 1 (lower is better)
Translates to: IFRQKQCTSGSISQY*SIVLCISSCLMGTT
Trigger: CGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR GCA 90 bp CATGCATTTCATAATGACTGTATCTGTCTGTCTTATTTCTCCCTCTaGAGCAATTACCTGGCCAACAGCCTGAATTCGGAACTAATTCAG +
Preference number: 1 (lower is better)
Translates to: HAFHNDCICLSYFSL*SNYLANSLNSELIQ
Trigger: CTGAATTAGTTCCGAATTCAGGCTGTTGGCCAGGTAATTGCTGCAGAGGGAGAAATAAGACAGACAGATACAGTCATTATGAAATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR-3UTR CCA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCATGGCCCCTGTACCCTaGAATTCCTGGTTCTCCATC +
Preference number: 2 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPMAPVP*NSWFSI
Trigger: GATGGAGAACCAGGAATTCCAGGGTACAGGGGCCAT...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGGGTCCAACATCACCTTaGAGTCCTCGCAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGGPTSP*SPRSPG
Trigger: GCCAGGACTGCGAGGACTGCAAGGTGATGTTGGACC...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 90 bp AGGCTGCCCTTTCAGGCCAGGGTCTCCACATGGTCCTTGATCACCTaGTGCTCCTCGGTGACCTCTTTTACCTTGAATTCCAGGTTGACC +
Preference number: 2 (lower is better)
Translates to: RLPFQARVSTWSLIT*CSSVTSFTLNSRLT
Trigger: GGTCAACCTGGAATTCAAGGTAAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGACCCTGGCCTGAAAGGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTCAGTCCTCGCAGTCCTaGCTCTCCTGGAAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPQSSQS*LSWKSS
Trigger: AGAGGACTTCCAGGAGAGCCAGGACTGCGAGGACTG...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTGTCCTTGTTGTCCAGTaGCACCTCTTAGTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFVLVVQ*HLLVLV
Trigger: TACCAGGACTAAGAGGTGCCACTGGACAACAAGGAC...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTTGGACCGATAGGTCCTaGAACCCCAGGAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLWTDRS*NPRRTW
Trigger: CCAGGTCCTCCTGGGGTTCCAGGACCTATCGGTCCA...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAAAACCCCAGGAGGACCTaGATATCCCATAACACCTTT +
Preference number: 2 (lower is better)
Translates to: ASIPFRTFRAWESLETCQNPRRT*ISHNTF
Trigger: AAAGGTGTTATGGGATATCCAGGTCCTCCTGGGGTT...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp GGGTTATCTCGTGTGCCAAGAGGATTCTTGATGCTGTGCAATAAATTGCTAAGGCAATCCAGAGGGTCCTaGTTGGCCCTGATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GLSRVPRGFLMLCNKLLRQSRGS*LALMAP
Trigger: AGGGGCCATCAGGGCCAACCAGGACCCTCTGGATTG...CCTTAGCAATTTATTGCACAGCATCAAGAATCCTCTTGGCACACGAGATAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTTTCTCCTTTAGGTCCTaGCAATCCAGAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLFSFRS*QSRGSW
Trigger: CCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAA...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR TCA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTTGCCCATCGGGGACCTaGATACAGCTTAGTGTTTTG +
Preference number: 2 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFCPSGT*IQLSVL
Trigger: CAAAACACTAAGCTGTATTCAGGTCCCCGATGGGCA...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTCTCCCTTTTCGCCAATaGTTCCAGTCATCCCAACTT +
Preference number: 2 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLLPFRQ*FQSSQL
Trigger: AAGTTGGGATGACTGGAAGCATTGGCGAAAAGGGAG...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCCAGTCCTGGCTCTCCTaGAAGTCCTCTGTCACCTGT +
Preference number: 2 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIQSWLS*KSSVTC
Trigger: ACAGGTGACAGAGGACTTCCAGGAGAGCCAGGACTG...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAATCTCCCTTTGCACCTaGTTCACCTTGCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKISLCT*FTLQTR
Trigger: TCTGGTCTGCAAGGTGAACCAGGTGCAAAGGGAGAT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTACGACCTCTTTGCCCTaGAATTCCCACAATTCCTTC +
Preference number: 2 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFTTSLP*NSHNSF
Trigger: GAAGGAATTGTGGGAATTCCAGGGCAAAGAGGTCGT...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGCTCCATAGTGCTCTaGATCTCCAGCTGTCTAATG +
Preference number: 2 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKCSIVL*ISSCLM
Trigger: CATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR-3UTR CCA 90 bp GGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTGTTCCTGGCACAGAGCAGGCCCTCTaGTGGATCACAGTTTTATTC +
Preference number: 2 (lower is better)
Translates to: GSSSGLSQLQTPTSIVPGTEQAL*WITVLF
Trigger: GAATAAAACTGTGATCCACCAGAGGGCCTGCTCTGT...GCCAGGAACAATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
3UTR-3UTR CCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTCTCCTTTTTCACCCTTaGCACCTTGTATACCTTGTT +
Preference number: 2 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLLLFHP*HLVYLV
Trigger: AACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAG...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTAGGACAGCCAAGATTTaGGTCAATCCAGTATTTTCC +
Preference number: 2 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLRTAKI*VNPVFS
Trigger: GGAAAATACTGGATTGACCCAAATCTTGGCTGTCCT...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGGTAGTTCAGGGTTTTaGATATCTCTTCACTGTGGT +
Preference number: 2 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKGSSGF*ISLHCG
Trigger: ACCACAGTGAAGAGATATTCAAAACCCTGAACTACC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR TCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCAACCTCAATGGCATCTaGAGGACAGCCAAGATTTGG +
Preference number: 2 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAINLNGI*RTAKIW
Trigger: CCAAATCTTGGCTGTCCTTCAGATGCCATTGAGGTT...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCTTCCAGGAGGACCTCTaGTTCCAACTTCTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAFQEDL*FQLLLW
Trigger: CCACAGGAGAAGTTGGAAGCAGAGGTCCTCCTGGAA...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR TCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATGCCCATCGGGGACCTaGATACAGCTTAGTGTTTTG +
Preference number: 2 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTCPSGT*IQLSVL
Trigger: CAAAACACTAAGCTGTATTCAGGTCCCCGATGGGCA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370571.7
3UTR-3UTR GCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTCTTATTTCTCCCTCTaGAGCAATTACCTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIISYFSL*SNYLAN
Trigger: GTTGGCCAGGTAATTGCTGCAGAGGGAGAAATAAGA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
3UTR-3UTR GCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMSISQY*SIVLCI
Trigger: GATGCAGAGCACTATGGAGCAATACTGGCTAATGCT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
3UTR-3UTR GCA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTCAGGGTTTCCTGAAATaGCATCTGCTCCATGGTATC +
Preference number: 2 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILQGFLK*HLLHGI
Trigger: GATACCATGGAGCAGATGGCATTTCAGGAAACCCTG...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR TCA 90 bp AGTTTTGAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTTGATTAGGTTCAAGGCCTGTTTGGCCTaGTCTACCCAAGGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: SFEMRKFLYFNHWKLIRFKACLA*STQGSY
Trigger: ATAGGACCCTTGGGTAGATCAGGCCAAACAGGCCTT...GAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKASISQY*SIVLCI
Trigger: GATGCAGAGCACTATGGAGCAATACTGGCTAATGCT...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 90 bp CAGTATTTTCCATCTGATACTTTTTGTTCACAGTTAAGTAAATCTTaGCAGATTCGTGCTGGGTTATCTCGTGTGCCAAGAGGATTCTTG +
Preference number: 2 (lower is better)
Translates to: QYFPSDTFCSQLSKS*QIRAGLSRVPRGFL
Trigger: CAAGAATCCTCTTGGCACACGAGATAACCCAGCACGAATCTGCAAAGATTTACTTAACTGTGAACAAAAAGTATCAGATGGAAAATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR GCA 90 bp AGTTTTGAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTTGATTAGGTTCTCTTATTTCTCCCTCTaGAGCAATTACCTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: SFEMRKFLYFNHWKLIRFSYFSL*SNYLAN
Trigger: GTTGGCCAGGTAATTGCTGCAGAGGGAGAAATAAGA...GAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 72 bp CACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTaGCTGGAGGTCCCTCCATGCCCATTTCTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: HLVHLADQTLPQ*LEVPPCPFLQE
Trigger: CTCCTGGAGAAATGGGCATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 72 bp GCAGTTCCAACATCTCCCTTTGCACCTGGTTCACCTTaGAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: AVPTSPFAPGSP*RPDSPSVPGGP
Trigger: GGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTTGCTCCATGGTATCCTaGTATGCCTTTTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFCSMVS*YAFWPK
Trigger: CTTGGGCCAAAAGGCATACAAGGATACCATGGAGCA...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGTTCCAACATCTCCCTTaGCACCTGGTTCACCTTGCA +
Preference number: 3 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGFQHLP*HLVHLA
Trigger: TGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGAA...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CCA 72 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTaGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LAIPSLETNRQS*ATCLCACPPWG
Trigger: ACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
3UTR-3UTR CAA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTTCTCCTTTTTCACCCTaGGCACCTTGTATACCTTGT +
Preference number: 3 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFSPFSP*APCIPC
Trigger: ACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAGA...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR TCA 72 bp TTAGGGCCTGGGAATCCTTGGAAACCTGTCAAACCTTaGACACCATATTCTCCAGGCTGCCCTTTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: LGPGNPWKPVKP*TPYSPGCPFRP
Trigger: TGGCCTGAAAGGGCAGCCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTTCCAAGGATTCCCAGGCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTCCCAGGTGGTCCTCTaGCCCCCACATGACCAGGTA +
Preference number: 3 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGSQVVL*PPHDQV
Trigger: TACCTGGTCATGTGGGGGCAAGAGGACCACCTGGGA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR TCA 72 bp GTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTaGATGGTGATGATATGGGTGGCTTCCGAACTCAGT +
Preference number: 3 (lower is better)
Translates to: VCVLVHLGVFRQ*MVMIWVASELS
Trigger: ACTGAGTTCGGAAGCCACCCATATCATCACCATTCACTGTCTAAACACCCCAAGGTGGACAAGCACACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
3UTR GCA 72 bp TCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCTCTaGATCTCCAGCTGTCTAATGGGTACTACGCACTCA +
Preference number: 3 (lower is better)
Translates to: SGSISQYCSIVL*ISSCLMGTTHS
Trigger: TGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCAATACTGGCTAATGCTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR GCA 72 bp CAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATCTCCAGCTGTCTAATG +
Preference number: 3 (lower is better)
Translates to: QKQCTSGSISQY*SIVLCISSCLM
Trigger: CATTAGACAGCTGGAGATGCAGAGCACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR GCA 72 bp TTCCTGAAATGCCATCTGCTCCATGGTATCCTTGTATaGCTTTTGGCCCAAGTAGGCCTTGAAGTCCAGGAA +
Preference number: 3 (lower is better)
Translates to: FLKCHLLHGILV*LLAQVGLEVQE
Trigger: TTCCTGGACTTCAAGGCCTACTTGGGCCAAAAGGCATACAAGGATACCATGGAGCAGATGGCATTTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAATCCTTGTATGCCTTTaGGCCCAAGTAGGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKILVCL*AQVGLE
Trigger: TTCAAGGCCTACTTGGGCCAAAAGGCATACAAGGAT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTTGGTCCTTGATCACCTaGTGCTCCTCGGTGACCTCT +
Preference number: 3 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILWSLIT*CSSVTS
Trigger: AGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCA...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR GCA 72 bp TTCCTGGTGGCCCAATTTTTCCAGGGTTTCCTGAAATaGCATCTGCTCCATGGTATCCTTGTATGCCTTTTG +
Preference number: 3 (lower is better)
Translates to: FLVAQFFQGFLK*HLLHGILVCLL
Trigger: CAAAAGGCATACAAGGATACCATGGAGCAGATGGCATTTCAGGAAACCCTGGAAAAATTGGGCCACCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCTGGCCATTCCATCCCTaGAAACCAATAGGCAATCCT +
Preference number: 3 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIWPFHP*KPIGNP
Trigger: AGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATAAAGCCATAAGCACCTaGTTTTCGAAAGAGCACCAA +
Preference number: 3 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDKAIST*FSKEHQ
Trigger: TTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTT...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
3UTR TCA 72 bp TCCATCTGTAGGGCAGTATTTGATTCAATCAAGGCTTaGATAGCAGCATTGATATCCATTTGCTTAGTTTCA +
Preference number: 3 (lower is better)
Translates to: SICRAVFDSIKA*IAALISICLVS
Trigger: TGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTGATTGAATCAAATACTGCCCTACAGATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR TCA 72 bp CAGAACTGCTGTCAATGTAATACTTTCGTTCAGTTTTaGGATGAGGAAGTTTTTGTACTTCAATCACTGGAA +
Preference number: 3 (lower is better)
Translates to: QNCCQCNTFVQF*DEEVFVLQSLE
Trigger: TTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACTGAACGAAAGTATTACATTGACAGCAGTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCCTCCATACCTGGGATACCTGCTaGACCAGGTGGACCGGGAGG +
Preference number: 4 (lower is better)
Translates to: TWFTLQTRLSLSAWRSLHTWDTC*TRWTGR
Trigger: CCTCCCGGTCCACCTGGTCCAGCAGGTATCCCAGGT...ATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCCATGTGGCCCTGGTATaGCCCGTGGACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLAHVALV*PVDLSS
Trigger: GGAAGAGAGGTCCACGGGGCATACCAGGGCCACATG...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCCTCCATGGCTTCCTAGCTCTCTaGCTCGGTAACGAACGAGCC +
Preference number: 4 (lower is better)
Translates to: TWFTLQTRLSLSAWRSLHGFLAL*LGNERA
Trigger: GGCTCGTTCGTTACCGAGCCAGAGAGCTAGGAAGCC...ATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCTCCTGGAGGGCCAGATaGTCCTTGGAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLASWRAR*SLESWV
Trigger: GACCCAGGACTCCAAGGACCATCTGGCCCTCCAGGA...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCCTCCATTACTCCTGGAGGACCTaGAGCCCCAGCAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: TWFTLQTRLSLSAWRSLHYSWRT*SPSKTC
Trigger: ACAGGTCTTGCTGGGGCTCCAGGTCCTCCAGGAGTA...ATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCTCACCCTTTGGGCCTTaGATTCCTGGGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLASPFGP*IPGLPG
Trigger: GCCAGGAAGCCCAGGAATTCAAGGCCCAAAGGGTGA...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTCTGGAGGTCCCTCCATaGCCATTTCTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFLEVPP*PFLQEV
Trigger: GACCTCCTGGAGAAATGGGCATGGAGGGACCTCCAG...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCGTCCCCCACTGGACCTaGTTCACCTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVVPHWT*FTSRPR
Trigger: CCTGGGCCTCGAGGTGAACCAGGTCCAGTGGGGGAC...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR CAA 72 bp TTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTaGGCCCTGATGGCCCCTGTACCCTGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSFRSWQSRGSW*ALMAPVPWNSW
Trigger: CCAGGAATTCCAGGGTACAGGGGCCATCAGGGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGACCCCGGAGGACCAGTaGCACCTACAAGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQTPEDQ*HLQVQD
Trigger: GTCCTGGACTTGTAGGTGGCACTGGTCCTCCGGGGT...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAAGGTCCAACATCACCTTaGAGTCCTCGCAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQGPTSP*SPRSPG
Trigger: GCCAGGACTGCGAGGACTGCAAGGTGATGTTGGACC...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCGCACCTGGTTCACCTTaGAGACCAGACTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLAAPGSP*RPDSPS
Trigger: TGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGC...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTAAAACCCTCTGGTCCTaGAGGGCCAGATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFKTLWS*RARWSL
Trigger: CAAGGACCATCTGGCCCTCCAGGACCAGAGGGTTTT...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAACAGTCCTCGCAGTCCTaGCTCTCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQQSSQS*LSWKSS
Trigger: AGAGGACTTCCAGGAGAGCCAGGACTGCGAGGACTG...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTTCACCCTGGTCACCTaGTTCGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQFTLVT*FAWGSL
Trigger: CAAGGACCCCCAGGCGAACCAGGTGACCAGGGTGAA...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGAGTCCTTGTTCACCCTaGTCACCTGGTTCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGSPCSP*SPGSPG
Trigger: CCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACT...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 72 bp AGCAGTTCCAACATCTCCCTTTGCACCTGGTTCACCTaGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSSNISLCTWFT*QTRLSLSAWRS
Trigger: GGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGAACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCCTCCCTTTTCGCCAATaGTTCCAGTCATCCCAACTT +
Preference number: 4 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPLPFRQ*FQSSQL
Trigger: AAGTTGGGATGACTGGAAGCATTGGCGAAAAGGGAG...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCATCTTTGCAGATTCGTaGTGGGTTATCTCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPIFADS*WVISCA
Trigger: GGCACACGAGATAACCCAGCACGAATCTGCAAAGAT...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTACCTGCTGGACCAGGTaGACCGGGAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LAIPSLETNRQSWATCLCTCWTR*TGRSSV
Trigger: GACACTGGACCTCCCGGTCCACCTGGTCCAGCAGGT...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTCCTGGAGGGCCAGATaGTCCTTGGAGTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSWRAR*SLESWV
Trigger: GACCCAGGACTCCAAGGACCATCTGGCCCTCCAGGA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp ATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGATGGACCTCTCTTCCCTaGCGGACCTGGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: IGNPGPLVCVLVHLGVFRWTSLP*RTWDTC
Trigger: GCAGGTATCCCAGGTCCGTCAGGGAAGAGAGGTCCA...TCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCAAACCTGTCAAACCTTaGACACCATATTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPKPVKP*TPYSPG
Trigger: GCCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTT...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAATTCCAGGAGGACCTCTaGTTCCAACTTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQFQEDL*FQLLLW
Trigger: CCACAGGAGAAGTTGGAAGCAGAGGTCCTCCTGGAA...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGTCCAAGGAGTCCCTTTaGTCCTTCAGGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGSKESL*SFRAVL
Trigger: CAAAACGGCCCTGAAGGACCAAAGGGACTCCTTGGA...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGTGGACCGATAGGTCCTaGAACCCCAGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWWTDRS*NPRRTW
Trigger: CCAGGTCCTCCTGGGGTTCCAGGACCTATCGGTCCA...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCCAGTCCTCGCAGTCCTaGCTCTCCTGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVQSSQS*LSWKSS
Trigger: AGAGGACTTCCAGGAGAGCCAGGACTGCGAGGACTG...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACAATCCAGAGGGTCCTaGTTGGCCCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPQSRGS*LALMAP
Trigger: AGGGGCCATCAGGGCCAACCAGGACCCTCTGGATTG...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGCTCCCTGAGTTCCTTTaGGACCAGGAGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGLPEFL*DQEVQE
Trigger: CTCCTGGACCTCCTGGTCTCAAAGGAACTCAGGGAG...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTGTCCTTTAGGACCTTaGCTCCCAGGTGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQCPLGP*LPGGPL
Trigger: AAGAGGACCACCTGGGAGTCAAGGTCCTAAAGGACA...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGGTCCTGGTTGGCCCTaGTGGCCCCTGTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVGPGWP*WPLYPG
Trigger: TCCAGGGTACAGGGGCCATCAGGGCCAACCAGGACC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGAGGACCTTTAGGACCTaGTATCCCAACAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGRTFRT*YPNNAS
Trigger: GCTGGCATTGTTGGGATATCAGGTCCTAAAGGTCCT...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGGCAGAGGATGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVRQRMQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCATCCTCTGCCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTTCTGCTTGGCGACACTaGTGTTTCACATATCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFSAWRH*CFTYLQ
Trigger: CTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGA...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGGTTATCTCGTGTGCCAAGAGGATTCTTGATGCTGTGCAATAAATTGCTAAGGCGGACCTGGGATACCTaGTGGACCAGGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: GLSRVPRGFLMLCNKLLRRTWDT*WTRWTG
Trigger: CCCGGTCCACCTGGTCCAGCAGGTATCCCAGGTCCG...CCTTAGCAATTTATTGCACAGCATCAAGAATCCTCTTGGCACACGAGATAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGGGCCACTTGTTTGTGTaGTTGTCCACCTTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQGHLFV*LSTLGC
Trigger: ACACCCCAAGGTGGACAAGCACACAAACAAGTGGCC...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGTTTCAGCAAATAGTTTaGGCGGGGGAGAGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGFQQIV*AGESVP
Trigger: CGGAACACTCTCCCCCGCCCAAACTATTTGCTGAAA...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGACCAGGATTTCCATGTaGCCCTGGTATGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWTRISM*PWYAPW
Trigger: CCACGGGGCATACCAGGGCCACATGGAAATCCTGGT...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGAATTCCTTGTTCACCTaGAAGTCCTGGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGNSLFT*KSWESR
Trigger: CCTGGACTCCCAGGACTTCCAGGTGAACAAGGAATT...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTCCTGGGTCACCTGTTTaGCCTGAAGGCCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPPGSPV*PEGPDF
Trigger: AAAGTCAGGGCCTTCAGGCCAAACAGGTGACCCAGG...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATTCACCCTGGTCACCTaGTTCGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKFTLVT*FAWGSL
Trigger: CAAGGACCCCCAGGCGAACCAGGTGACCAGGGTGAA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTAAGACCTGTTCTTCCTaGGCCGCCTCTGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCAKTCSS*AASDAR
Trigger: CCTGGCATCAGAGGCGGCCCAGGAAGAACAGGTCTT...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGCTCCAGGTGGACCTaGAGGCCCTGGTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKCSRWT*RPWLTS
Trigger: AGAGGTCAACCAGGGCCTCCAGGTCCACCTGGAGCA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAGCCTGGTGCTCCAGGTaGACCTGGAGGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVAWCSR*TWRPWL
Trigger: CAACCAGGGCCTCCAGGTCCACCTGGAGCACCAGGC...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp ACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCCTCCATAGGCTGAAATTTGTCTaGGTATCTTCCTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: TWFTLQTRLSLSAWRSLHRLKFV*VSSSVI
Trigger: GATCACTGAGGAAGATACTCAGACAAATTTCAGCCT...ATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAATCATTTTTGCCTCACTaGTGCGATGAGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQSFLPH*CDEWSL
Trigger: CAGTGACCACTCATCGCATCAGTGAGGCAAAAATGA...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTTCTCCAGGAACAGGTTaGCCTGGGGAAAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPSPGTG*PGENPG
Trigger: TCCAGGATTTTCCCCAGGTCAACCTGTTCCTGGAGA...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAACTCCCTGAGTTCCTTTaGGACCAGGAGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKLPEFL*DQEVQE
Trigger: CTCCTGGACCTCCTGGTCTCAAAGGAACTCAGGGAG...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTGGTCCTGGTTGGCCCTaGTGGCCCCTGTACCCTGGA +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIGPGWP*WPLYPG
Trigger: TCCAGGGTACAGGGGCCATCAGGGCCAACCAGGACC...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTGCCCATCGGGGACCTaGATACAGCTTAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQCPSGT*IQLSVL
Trigger: CAAAACACTAAGCTGTATTCAGGTCCCCGATGGGCA...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCAGTGTCTTACGTCTTTaGCTCCAAGGCCTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLASVLRL*LQGLVD
Trigger: ATCAACTAGGCCTTGGAGGCAAAGACGTAAGACACT...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTGGTCCTGGTTCACCTaGATACCCCTTTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVWSWFT*IPLLTW
Trigger: CCAGGTCAAAAGGGGTATGCAGGTGAACCAGGACCA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAACATGGTATCCTTGTATaGCTTTTGGCCCAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQHGILV*LLAQVG
Trigger: GCCTACTTGGGCCAAAAGGCATACAAGGATACCATG...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCTGGTTCACCTTGCAGACCAGACTCTCCCTCAGTGCCTGGAGGTCCCTCCATATGCTTGTTTCAGGTTaGTATTTGTCTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TWFTLQTRLSLSAWRSLHMLVSG*YLSAWR
Trigger: TCGCCAAGCAGACAAATACCAACCTGAAACAAGCAT...ATGGAGGGACCTCCAGGCACTGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTATTTCCATGTGGCCCTaGTATGCCCCGTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: LAIPSLETNRQSWATCLCISMWP*YAPWTS
Trigger: AGAGGTCCACGGGGCATACCAGGGCCACATGGAAAT...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CCAATTTTTCCAGGAGGACCTCTGCTTCCAACTTCTCCTGTGGGTCCTATTTGTTCCTGGAAAACCCTCTaGTCCTGGAGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: PIFPGGPLLPTSPVGPICSWKTL*SWRARW
Trigger: CCATCTGGCCCTCCAGGACCAGAGGGTTTTCCAGGA...ACAAATAGGACCCACAGGAGAAGTTGGAAGCAGAGGTCCTCCTGGAAAAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCTCTCCTTTTTCACCCTTaGCACCTTGTATACCTTGTT +
Preference number: 4 (lower is better)
Translates to: GVLVVQWHLLVLVHPHGPLLFHP*HLVYLV
Trigger: AACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAG...AGGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAACCCGGAAGGCCTGTTTaGCCTGATCTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKPGRPV*PDLPKG
Trigger: ACCCTTGGGTAGATCAGGCCAAACAGGCCTTCCGGG...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTCCCGGAAGGCCTGTTTaGCCTGATCTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLPGRPV*PDLPKG
Trigger: ACCCTTGGGTAGATCAGGCCAAACAGGCCTTCCGGG...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCATGGCCCCTGTACCCTaGAATTCCTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVMAPVP*NSWFSI
Trigger: GATGGAGAACCAGGAATTCCAGGGTACAGGGGCCAT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTTTCTCCTTTAGGTCCTaGCAATCCAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPFSFRS*QSRGSW
Trigger: CCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAA...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGTCACCTGGTTCGCCTaGGGGTCCTTGTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKVTWFA*GSLLSS
Trigger: ACTGGACAACAAGGACCCCCAGGCGAACCAGGTGAC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCGTCACCTGGTTCGCCTaGGGGTCCTTGTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFVTWFA*GSLLSS
Trigger: ACTGGACAACAAGGACCCCCAGGCGAACCAGGTGAC...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAAGACCTGTTCTTCCTaGGCCGCCTCTGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKKTCSS*AASDAR
Trigger: CCTGGCATCAGAGGCGGCCCAGGAAGAACAGGTCTT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATACTCCTGGAGGACCTaGAGCCCCAGCAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKYSWRT*SPSKTC
Trigger: ACAGGTCTTGCTGGGGCTCCAGGTCCTCCAGGAGTA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCAGCCAGGGTCTCCACATaGTCCTTGATCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPARVST*SLITLC
Trigger: GCACAAGGTGATCAAGGACCATGTGGAGACCCTGGC...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATGGACCTCTCTTCCCTaGCGGACCTGGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVWTSLP*RTWDTC
Trigger: GCAGGTATCCCAGGTCCGTCAGGGAAGAGAGGTCCA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCAAAGGCCTGTTTGGCCTaGTCTACCCAAGGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPKACLA*STQGSY
Trigger: ATAGGACCCTTGGGTAGATCAGGCCAAACAGGCCTT...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCTCCGAACTCAGTAAATaGAGGAAGTTCATCTGGACT +
Preference number: 4 (lower is better)
Translates to: WVALFSFRSWQSRGSWLASELSK*RKFIWT
Trigger: AGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGA...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGGCAGGAGAATCGCTTaGACCCGGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVGRRIA*TREAED
Trigger: ATCCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCGGACCTGGGATACCTaGTGGACCAGGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNRTWDT*WTRWTG
Trigger: CCCGGTCCACCTGGTCCAGCAGGTATCCCAGGTCCG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGCACCTGGTTCACCTTaGAGACCAGACTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKAPGSP*RPDSPS
Trigger: TGAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGATCTTTGCAGATTCGTaGTGGGTTATCTCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQIFADS*WVISCA
Trigger: GGCACACGAGATAACCCAGCACGAATCTGCAAAGAT...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR GCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTAGTGAGCCAAGATCATaGCACTGTGCTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCASEPRS*HCAPAW
Trigger: CCAAGCTGGAGCACAGTGGCATGATCTTGGCTCACT...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTACCTGCTGGACCAGGTaGACCGGGAGGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIITCWTR*TGRSSV
Trigger: GACACTGGACCTCCCGGTCCACCTGGTCCAGCAGGT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGACCTGGGATACCTGCTaGACCAGGTGGACCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMTWDTC*TRWTGR
Trigger: CCTCCCGGTCCACCTGGTCCAGCAGGTATCCCAGGT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTGCACCTTTAGGACCTaGATTACCTTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVCTFRT*ITFWSS
Trigger: GCTGGACCAGAAGGTAATCCAGGTCCTAAAGGTGCA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGTCCCCCACTGGACCTaGTTCACCTCGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTVPHWT*FTSRPR
Trigger: CCTGGGCCTCGAGGTGAACCAGGTCCAGTGGGGGAC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTCCTGGTACACCCACATaGCCCTTATATCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCAPGTPT*PLYPSA
Trigger: AGCAGAGGGATATAAGGGCCATGTGGGTGTACCAGG...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGCCCTTTTCACCTCTaGGTCCAGTTCTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSPFHL*VQFYLL
Trigger: CAACAGGTAGAACTGGACCCAGAGGTGAAAAGGGCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
3UTR CAA 72 bp TTTCAGGCCAGGGTCTCCACATGGTCCTTGATCACCTaGTGCTCCTCGGTGACCTCTTTTACCTTGAATTCC +
Preference number: 4 (lower is better)
Translates to: FQARVSTWSLIT*CSSVTSFTLNS
Trigger: GGAATTCAAGGTAAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGACCCTGGCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 72 bp TTTAGGGCCTGGGAATCCTTGGAAACCTGTCAAACCTaGAACACCATATTCTCCAGGCTGCCCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FRAWESLETCQT*NTIFSRLPFQA
Trigger: GGCCTGAAAGGGCAGCCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTTCCAAGGATTCCCAGGCCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTGCGATGAGTGGTCACTaGCAGGCTGAAATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCAAMSGH*QAEICL
Trigger: CAGACAAATTTCAGCCTGTCAGTGACCACTCATCGC...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGTCCTTTAGGACCTTaGCTCCCAGGTGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKCPLGP*LPGGPL
Trigger: AAGAGGACCACCTGGGAGTCAAGGTCCTAAAGGACA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAACCTCAATGGCATCTaGAGGACAGCCAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVNLNGI*RTAKIW
Trigger: CCAAATCTTGGCTGTCCTTCAGATGCCATTGAGGTT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTCTGGCCACCAGCACTaGAATTGCAGAAAACCTCAA +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSGHQH*NCRKPQ
Trigger: TTGAGGTTTTCTGCAATTTCAGTGCTGGTGGCCAGA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp GGGTTATCTCGTGTGCCAAGAGGATTCTTGATGCTGTGCAATAAATTGCTAAGGCAGCTAAACCCTGCCTaGCAGGGTAACCGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GLSRVPRGFLMLCNKLLRQLNPA*QGNRVN
Trigger: GTTCACCCGGTTACCCTGGCAGGCAGGGTTTAGCTG...CCTTAGCAATTTATTGCACAGCATCAAGAATCCTCTTGGCACACGAGATAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGACCCCGGAGGACCAGTaGCACCTACAAGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMTPEDQ*HLQVQD
Trigger: GTCCTGGACTTGTAGGTGGCACTGGTCCTCCGGGGT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGCTAGCTCTCCTGCTGTaGCTTGTTCACCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGLALLL*LVHPYH
Trigger: GTGATAAGGGTGAACAAGGCACAGCAGGAGAGCTAG...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGGTCCTGGTTCACCTaGATACCCCTTTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKWSWFT*IPLLTW
Trigger: CCAGGTCAAAAGGGGTATGCAGGTGAACCAGGACCA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTGGACGACCTCTTTaGCCTGGAATTCCCACAATT +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPPGRPL*PGIPTI
Trigger: AATTGTGGGAATTCCAGGGCAAAGAGGTCGTCCAGG...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTCTTATTTCTCCCTCTaGAGCAATTACCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQSYFSL*SNYLAN
Trigger: GTTGGCCAGGTAATTGCTGCAGAGGGAGAAATAAGA...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTCCAGTGTCTCCTTTTaGCCCTCTCAGATACTCCAT +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSSVSF*PSQILH
Trigger: ATGGAGTATCTGAGAGGGCCAAAAGGAGACACTGGA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAATCCTGGATCTCCTTTaGGGCCCTTTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKILDLL*GPLDQV
Trigger: TACCTGGTCCAAAGGGCCCCAAAGGAGATCCAGGAT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp ATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGAAGGAACAGGTTGACCTaGGGAAAATCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: IGNPGPLVCVLVHLGVFRRNRLT*GKSWIS
Trigger: GGAGATCCAGGATTTTCCCCAGGTCAACCTGTTCCT...TCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCCTGGAAAACCCTCTaGTCCTGGAGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSWKTL*SWRARW
Trigger: CCATCTGGCCCTCCAGGACCAGAGGGTTTTCCAGGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAACCCCAGGAGGACCTaGATATCCCATAACACCTTT +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVNPRRT*ISHNTF
Trigger: AAAGGTGTTATGGGATATCCAGGTCCTCCTGGGGTT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTGGACCGATAGGTCCTaGAACCCCAGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSWTDRS*NPRRTW
Trigger: CCAGGTCCTCCTGGGGTTCCAGGACCTATCGGTCCA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGCAATCCAGAGGGTCCTaGTTGGCCCTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMQSRGS*LALMAP
Trigger: AGGGGCCATCAGGGCCAACCAGGACCCTCTGGATTG...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTTTTGCAGATTCGTGCTaGGTTATCTCGTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPFADSC*VISCAK
Trigger: CTTGGCACACGAGATAACCCAGCACGAATCTGCAAA...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTTTTGCAGATTCGTGCTaGGTTATCTCGTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: AILGHLFVCLSTLGCLDSFADSC*VISCAK
Trigger: CTTGGCACACGAGATAACCCAGCACGAATCTGCAAA...ACTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGAGGTAAGCATGTCTaGCCACCAGCACTGAAATTG +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWGGKHV*PPALKL
Trigger: CAATTTCAGTGCTGGTGGCCAGACATGCTTACCTCC...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
3UTR CAA 72 bp AAATGCCATCTGCTCCATGGTATCCTTGTATGCCTTTaGGCCCAAGTAGGCCTTGAAGTCCAGGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: KCHLLHGILVCL*AQVGLEVQESQ
Trigger: CTGGGATTCCTGGACTTCAAGGCCTACTTGGGCCAAAAGGCATACAAGGATACCATGGAGCAGATGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 72 bp AGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTaGGAAACCTGTCAAACCTTGAACACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: SIPFRTFRAWES*ETCQTLNTIFS
Trigger: GGAGAATATGGTGTTCAAGGTTTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGTTAAATGGACCCCCTaGGGTAACGGTGTAGATGCT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKVKWTP*GNGVDA
Trigger: AGCATCTACACCGTTACCTCAGGGGGTCCATTTAAC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGAATCCAGAAAGGCCTTaGTCACCCTTTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWNPERP*SPFSPG
Trigger: TCCTGGAGAAAAGGGTGATCAAGGCCTTTCTGGATT...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCAGGATGTCCTTTaGGACCCTTATCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLVQDVL*DPYHLA
Trigger: TGCAAGGTGATAAGGGTCTCAAAGGACATCCTGGAC...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGCCAGGGTAACCGGGTaGACCAATATTACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKARVTG*TNITSK
Trigger: TTTGCTGGTAATATTGGTTCACCCGGTTACCCTGGC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCATTTTCCAGGGTTTCCTaGAATGCCATCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPFSRVS*NAICSM
Trigger: CATGGAGCAGATGGCATTTCAGGAAACCCTGGAAAA...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGTCACCCTTTGGGCCTTaGATTCCTGGGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMSPFGP*IPGLPG
Trigger: GCCAGGAAGCCCAGGAATTCAAGGCCCAAAGGGTGA...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCTCCACATGGTCCTTaGTCACCTTGTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSPHGP*SPCAPR
Trigger: CCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCAGGGGTGTTTAGACAGTaGATGGTGATGATATGGGTG +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPGVFRQ*MVMIWV
Trigger: CACCCATATCATCACCATTCACTGTCTAAACACCCC...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR TCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTaGATGGTGATGATATGGGTG +
Preference number: 4 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLGVFRQ*MVMIWV
Trigger: CACCCATATCATCACCATTCACTGTCTAAACACCCC...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR GCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGCACTCAAGTTCACTTaGGGTTCAAAGGCGACTCTG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKALKFT*GSKATL
Trigger: CAGAGTCGCCTTTGAACCGCAAGTGAACTTGAGTGC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGTATGCCTTGTTCTTGTaGATGAACAACCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGYALFL*MNNHPS
Trigger: GCTGGGGTGGTTGTTCATGCACAAGAACAAGGCATA...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCAGCTAAACCCTGCCTaGCAGGGTAACCGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSQLNPA*QGNRVN
Trigger: GTTCACCCGGTTACCCTGGCAGGCAGGGTTTAGCTG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTTCCTTGATCACCTTGTaGTCCTCGGTGACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFSLITL*SSVTSF
Trigger: AAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGA...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CCCATCAATCCTAAATGTCCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACTATTATACCTTCTCTaGCAAGGGGACCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PINPKCPTAPLVPLAPLGLLYLL*QGDQCF
Trigger: GAAACACTGGTCCCCTTGGCAGAGAAGGTATAATAG...TCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGGACATTTAGGATTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSISQY*SIVLCI
Trigger: GATGCAGAGCACTATGGAGCAATACTGGCTAATGCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp GGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTGTTCCTGGCTGCTCCTATTTCCTCTaGACAGTTCACACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSSSGLSQLQTPTSIVPGCSYFL*TVHTAP
Trigger: TGGGGCTGTGTGAACTGTGCAGAGGAAATAGGAGCA...GCCAGGAACAATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTGGCTTCCTAGCTCTCTaGCTCGGTAACGAACGAGCC +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIGFLAL*LGNERA
Trigger: GGCTCGTTCGTTACCGAGCCAGAGAGCTAGGAAGCC...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGATTACCAGCAAATCCTaGAATTCCTTGTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GNPGPLVCVLVHLGVFRQITSKS*NSLFTW
Trigger: CCAGGTGAACAAGGAATTCCAGGATTTGCTGGTAAT...CTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CCAATTTTTCCAGGAGGACCTCTGCTTCCAACTTCTCCTGTGGGTCCTATTTGTTGCACCTTTAGGACCTaGATTACCTTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PIFPGGPLLPTSPVGPICCTFRT*ITFWSS
Trigger: GCTGGACCAGAAGGTAATCCAGGTCCTAAAGGTGCA...ACAAATAGGACCCACAGGAGAAGTTGGAAGCAGAGGTCCTCCTGGAAAAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCTCCAAAGTCACCTaGAAAACCCTGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLVSKVT*KTLSPL
Trigger: AAGGGGAGACAGGGTTTTCCAGGTGACTTTGGAGAC...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAATCCAGCAGGTCCAATTaGTCCCACAGGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQSSRSN*SHRANT
Trigger: AGTGTTGGCCCTGTGGGACCAATTGGACCTGCTGGA...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAAAACCCTCTGGTCCTaGAGGGCCAGATGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVKTLWS*RARWSL
Trigger: CAAGGACCATCTGGCCCTCCAGGACCAGAGGGTTTT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCAGTCCTGGCTCTCCTaGAAGTCCTCTGTCACCTGT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVQSWLS*KSSVTC
Trigger: ACAGGTGACAGAGGACTTCCAGGAGAGCCAGGACTG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGTCCTTGTTGTCCAGTaGCACCTCTTAGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKVLVVQ*HLLVLV
Trigger: TACCAGGACTAAGAGGTGCCACTGGACAACAAGGAC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGAGTCCTTGTTCACCCTaGTCACCTGGTTCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMSPCSP*SPGSPG
Trigger: CCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGCCAGGGTCTCCACATaGTCCTTGATCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVARVST*SLITLC
Trigger: GCACAAGGTGATCAAGGACCATGTGGAGACCCTGGC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAGCCCTTTTCACCTCTaGGTCCAGTTCTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKSPFHL*VQFYLL
Trigger: CAACAGGTAGAACTGGACCCAGAGGTGAAAAGGGCT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTGGACCTGGAGGCCCTaGTTGACCTCTTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSWTWRP*LTSWSL
Trigger: CAAGGACCAAGAGGTCAACCAGGGCCTCCAGGTCCA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTTGCTTTCTTGGGCCTaGTGCTCCAGGTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIILLSWA*CSRWTW
Trigger: CCAGGTCCACCTGGAGCACCAGGCCCAAGAAAGCAA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTACCAATAGGCAATCCTaGGCCACTTGTTTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLTNRQS*ATCLCA
Trigger: AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGT...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTACCAATAGGCAATCCTaGGCCACTTGTTTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCATNRQS*ATCLCA
Trigger: AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGT...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR TCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCGCCTCACTGATGCGATaGGTGGTCACTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAASLMR*VVTDRL
Trigger: CAGCCTGTCAGTGACCACTCATCGCATCAGTGAGGC...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAAGGCCTGTTTGGCCTaGTCTACCCAAGGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVKACLA*STQGSY
Trigger: ATAGGACCCTTGGGTAGATCAGGCCAAACAGGCCTT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp GGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTGTTCCTGGCTCTGGCCACCAGCACTaGAATTGCAGAAAACCTCAA +
Preference number: 4 (lower is better)
Translates to: GSSSGLSQLQTPTSIVPGSGHQH*NCRKPQ
Trigger: TTGAGGTTTTCTGCAATTTCAGTGCTGGTGGCCAGA...GCCAGGAACAATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR TCA 90 bp GCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTTCCGAACTCAGTAAATaGAGGAAGTTCATCTGGACT +
Preference number: 4 (lower is better)
Translates to: AILGHLFVCLSTLGCLDSSELSK*RKFIWT
Trigger: AGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGA...ACTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR TCA 90 bp GCCAGCATCCCCTTCAGGACCTTTAGGGCCTGGGAATCCTTGGAAACCTGTCAACGTTCAGTTTTGAGATaGGGAAGTTTTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: ASIPFRTFRAWESLETCQRSVLR*GSFCTS
Trigger: TGAAGTACAAAAACTTCCTCATCTCAAAACTGAACG...TTGACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCTGAAGGGGATGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp ATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGAAGGTTGGTATTTGTCTaGTTGGCGACACTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IGNPGPLVCVLVHLGVFRRLVFV*LATLLF
Trigger: AAACAGCAGTGTCGCCAAGCAGACAAATACCAACCT...TCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACACATGTGGCCCTGGTATaGCCCGTGGACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTHVALV*PVDLSS
Trigger: GGAAGAGAGGTCCACGGGGCATACCAGGGCCACATG...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCTACAAGTCCAGGACTaGCATCAAGACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSLQVQD*HQDQQG
Trigger: GCCCTGCTGGTCTTGATGGCAGTCCTGGACTTGTAG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTTCCAGGAGGACCTCTaGTTCCAACTTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVFQEDL*FQLLLW
Trigger: CCACAGGAGAAGTTGGAAGCAGAGGTCCTCCTGGAA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATTTCCATGTGGCCCTaGTATGCCCCGTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSISMWP*YAPWTS
Trigger: AGAGGTCCACGGGGCATACCAGGGCCACATGGAAAT...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTCCAGCAGGTCCAATTaGTCCCACAGGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIISSRSN*SHRANT
Trigger: AGTGTTGGCCCTGTGGGACCAATTGGACCTGCTGGA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGCCTGGGTCACCTGTTTaGCCTGAAGGCCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMPGSPV*PEGPDF
Trigger: AAAGTCAGGGCCTTCAGGCCAAACAGGTGACCCAGG...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCCAAGGAGTCCCTTTaGTCCTTCAGGGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSKESL*SFRAVL
Trigger: CAAAACGGCCCTGAAGGACCAAAGGGACTCCTTGGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTCAGTCCTGGCTCTCCTaGAAGTCCTCTGTCACCTGT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIQSWLS*KSSVTC
Trigger: ACAGGTGACAGAGGACTTCCAGGAGAGCCAGGACTG...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAACCCATCTTTTCCCTaGAGACCTTCTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKNPSFP*RPSSPG
Trigger: TCCTGGAGAAGAAGGTCTCCAGGGAAAAGATGGGTT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCCTGGTACACCCACATaGCCCTTATATCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVPGTPT*PLYPSA
Trigger: AGCAGAGGGATATAAGGGCCATGTGGGTGTACCAGG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGGACAGCCAAGATTTaGGTCAATCCAGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVRTAKI*VNPVFS
Trigger: GGAAAATACTGGATTGACCCAAATCTTGGCTGTCCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTAGGACAGCCAAGATTTaGGTCAATCCAGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: AILGHLFVCLSTLGCLDSRTAKI*VNPVFS
Trigger: GGAAAATACTGGATTGACCCAAATCTTGGCTGTCCT...ACTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTACAGAGCAGGCCCTCTaGTGGATCACAGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLTEQAL*WITVLF
Trigger: GAATAAAACTGTGATCCACCAGAGGGCCTGCTCTGT...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGCCTTGTTCTTGTGCATaGACAACCACCCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMPCSCA*TTTPAT
Trigger: TGTGGCTGGGGTGGTTGTTCATGCACAAGAACAAGG...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAGCCTCACTGATGCGATaGGTGGTCACTGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTASLMR*VVTDRL
Trigger: CAGCCTGTCAGTGACCACTCATCGCATCAGTGAGGC...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCCATCTTCTTAAACAGTaGCAGACCAGTTACTCTATC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVHLLKQ*QTSYSI
Trigger: GATAGAGTAACTGGTCTGTCACTGTTTAAGAAGATG...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTTCTCCACATGGTCCTTaGTCACCTTGTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILSPHGP*SPCAPR
Trigger: CCGAGGAGCACAAGGTGATCAAGGACCATGTGGAGA...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCGATTCAATCAAGGCTTaGATAGCAGCATTGATATCC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVDSIKA*IAALIS
Trigger: GGATATCAATGCTGCTATTCAAGCCTTGATTGAATC...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGCCAAGAGGATTCTTaGTGCTGTGCAATAAATTGC +
Preference number: 4 (lower is better)
Translates to: AIPSLETNRQSWATCLCACQEDS*CCAINC
Trigger: GCAATTTATTGCACAGCATCAAGAATCCTCTTGGCA...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAATCTTGCAGTCATCTaGAAGCACTTTAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVNLAVI*KHFRFK
Trigger: CTTGAACCTAAAGTGCTTTCAGATGACTGCAAGATT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCCTGTGGGCTCTTAAATaGATTTGTATGCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVLWALK*ICMHLS
Trigger: GGACAAATGCATACAAATGCATTTAAGAGCCCACAG...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGGCTGTTTCACATATCTaGAGTAGTCTGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: WPFHPLKPIGNPGPLVCVAVSHI*SSLQML
Trigger: AAGCATCTGCAGACTACTGCAGATATGTGAAACAGC...CACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAGGTCCAACATCACCTTaGAGTCCTCGCAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTGPTSP*SPRSPG
Trigger: GCCAGGACTGCGAGGACTGCAAGGTGATGTTGGACC...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCTCCAACATCTCCCTTTaGACCTGGTTCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAISNISL*TWFTLQ
Trigger: CTGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGA...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGGGCCACTTGTTTGTGTaGTTGTCCACCTTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMGHLFV*LSTLGC
Trigger: ACACCCCAAGGTGGACAAGCACACAAACAAGTGGCC...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp CCCATCAATCCTAAATGTCCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGATGCCATCTTGAATCTTaGAGTCATCTGAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: PINPKCPTAPLVPLAPLGCHLES*SHLKAL
Trigger: AAGTGCTTTCAGATGACTGCAAGATTCAAGATGGCA...TCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGGACATTTAGGATTGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCAGCATTAGCCAGTATTaGTCCATAGTGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFSISQY*SIVLCI
Trigger: GATGCAGAGCACTATGGAGCAATACTGGCTAATGCT...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGGTATTTGTCTGCTTaGCGACACTGCTGTTTCACA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKWYLSA*RHCCFT
Trigger: TGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTTCCGGTATCTTTGTTaGTATGAGAGTTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVFRYLC*YESCTR
Trigger: CCTTGTACAACTCTCATACCAACAAAGATACCGGAA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATTTCAGCAAATAGTTTaGGCGGGGGAGAGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVFQQIV*AGESVP
Trigger: CGGAACACTCTCCCCCGCCCAAACTATTTGCTGAAA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGATCCTGGATCTCCTTTaGGGCCCTTTGGACCAGGTA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMILDLL*GPLDQV
Trigger: TACCTGGTCCAAAGGGCCCCAAAGGAGATCCAGGAT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAATTCCTTGTTCACCTaGAAGTCCTGGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVNSLFT*KSWESR
Trigger: CCTGGACTCCCAGGACTTCCAGGTGAACAAGGAATT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGATCTCCCTTTGCACCTaGTTCACCTTGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVISLCT*FTLQTR
Trigger: TCTGGTCTGCAAGGTGAACCAGGTGCAAAGGGAGAT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGATGGCCCCTGTACCCTaGAATTCCTGGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMMAPVP*NSWFSI
Trigger: GATGGAGAACCAGGAATTCCAGGGTACAGGGGCCAT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGATGCCATCTGCTCCATaGTATCCTTGTATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGMPSAP*YPCMPF
Trigger: AAAAGGCATACAAGGATACCATGGAGCAGATGGCAT...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCCCTTGTTCACCCTTTaGGCCTTGAATTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSPLFTL*ALNSWA
Trigger: AGCCCAGGAATTCAAGGCCCAAAGGGTGAACAAGGG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTTCCAGTTCTACCTGTTaGGCCTATTATACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFSSSTC*AYYTFS
Trigger: AGAGAAGGTATAATAGGCCCAACAGGTAGAACTGGA...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGGAGGTAAGCATGTCTaGCCACCAGCACTGAAATTG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVGGKHV*PPALKL
Trigger: CAATTTCAGTGCTGGTGGCCAGACATGCTTACCTCC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGAAGTGATTTGGTCATaGAAACAACTAGAGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWEVIWS*KQLESA
Trigger: AGCGGACTCTAGTTGTTTCCATGACCAAATCACTTC...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR TCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCCCTTGTTCTTGTGCATaGACAACCACCCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAPCSCA*TTTPAT
Trigger: TGTGGCTGGGGTGGTTGTTCATGCACAAGAACAAGG...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGAGTATCTTCCTCAGTaGTCATTTCTTTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLEYLPQ*SFLWPE
Trigger: TTCAGGCCAAAGAAATGATCACTGAGGAAGATACTC...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTTGGTCACTGACAGGCTaGAATTTGTCTGAGTATCTT +
Preference number: 4 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLWSLTG*NLSEYL
Trigger: AAGATACTCAGACAAATTTCAGCCTGTCAGTGACCA...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTGCGATGAGTGGTCACTaGCAGGCTGAAATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIAMSGH*QAEICL
Trigger: CAGACAAATTTCAGCCTGTCAGTGACCACTCATCGC...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCATTTTTGCCTCACTaGTGCGATGAGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSFLPH*CDEWSL
Trigger: CAGTGACCACTCATCGCATCAGTGAGGCAAAAATGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTCATCTTCTTAAACAGTaGCAGACCAGTTACTCTATC +
Preference number: 4 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFHLLKQ*QTSYSI
Trigger: GATAGAGTAACTGGTCTGTCACTGTTTAAGAAGATG...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTCTCCAGGAACAGGTTaGCCTGGGGAAAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNSPGTG*PGENPG
Trigger: TCCAGGATTTTCCCCAGGTCAACCTGTTCCTGGAGA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGGTCCAGGATGTCCTTTaGGACCCTTATCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMVQDVL*DPYHLA
Trigger: TGCAAGGTGATAAGGGTCTCAAAGGACATCCTGGAC...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGGCCAGGGTAACCGGGTaGACCAATATTACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMARVTG*TNITSK
Trigger: TTTGCTGGTAATATTGGTTCACCCGGTTACCCTGGC...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCAGGACCTTTAGGACCTaGTATCCCAACAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSRTFRT*YPNNAS
Trigger: GCTGGCATTGTTGGGATATCAGGTCCTAAAGGTCCT...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCGGTAGTTCAGGGTTTTaGATATCTCTTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFGSSGF*ISLHCG
Trigger: ACCACAGTGAAGAGATATTCAAAACCCTGAACTACC...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAAACCTCAATGGCATCTaGAGGACAGCCAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVNLNGI*RTAKIW
Trigger: CCAAATCTTGGCTGTCCTTCAGATGCCATTGAGGTT...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCTCTGGCCACCAGCACTaGAATTGCAGAAAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAISGHQH*NCRKPQ
Trigger: TTGAGGTTTTCTGCAATTTCAGTGCTGGTGGCCAGA...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATCCGAACTCAGTAAATaGAGGAAGTTCATCTGGACT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKSELSK*RKFIWT
Trigger: AGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCTGCCAGCTGCCATCTTaGATCTTGCAGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAICQLPS*ILQSSE
Trigger: TTCAGATGACTGCAAGATTCAAGATGGCAGCTGGCA...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCATTTATTAGAGGTTCATaGTTCCCTAGGAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSLETNRQSWATCLCACPFIRGS*FPRNGR
Trigger: CCTTCCATTCCTAGGGAATCATGAACCTCTAATAAA...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR GCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCTGCTTGGCGACACTaGTGTTTCACATATCTGCAG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSAWRH*CFTYLQ
Trigger: CTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCTCCCTTTTCGCCAATaGTTCCAGTCATCCCAACTT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVLPFRQ*FQSSQL
Trigger: AAGTTGGGATGACTGGAAGCATTGGCGAAAAGGGAG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATCTGGAGGTCCCTCCATaGCCATTTCTCCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDLEVPP*PFLQEV
Trigger: GACCTCCTGGAGAAATGGGCATGGAGGGACCTCCAG...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTCCAACATCTCCCTTTaGACCTGGTTCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIISNISL*TWFTLQ
Trigger: CTGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTCCTGGACGACCTCTTTaGCCTGGAATTCCCACAATT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIPGRPL*PGIPTI
Trigger: AATTGTGGGAATTCCAGGGCAAAGAGGTCGTCCAGG...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCAGGGTTTCCTGAAATaGCATCTGCTCCATGGTATC +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVQGFLK*HLLHGI
Trigger: GATACCATGGAGCAGATGGCATTTCAGGAAACCCTG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACAGGGTTTCCTGAAATaGCATCTGCTCCATGGTATC +
Preference number: 4 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQQGFLK*HLLHGI
Trigger: GATACCATGGAGCAGATGGCATTTCAGGAAACCCTG...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAATCTTTGCAGATTCGTaGTGGGTTATCTCGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVIFADS*WVISCA
Trigger: GGCACACGAGATAACCCAGCACGAATCTGCAAAGAT...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGGGCCACTTGTTTGTGTaGTTGTCCACCTTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGGHLFV*LSTLGC
Trigger: ACACCCCAAGGTGGACAAGCACACAAACAAGTGGCC...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR GCA 90 bp GCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTGTTTAGACAGTGAAGTAGGACTATCATaGTGCTCTTTATTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AILGHLFVCLSTLGCLDSEVGLS*CSLLEV
Trigger: AACCTCTAATAAAGAGCAGCATGATAGTCCTACTTC...ACTGTCTAAACACCCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CCA 90 bp CCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGTGATTATCCACAGATaGCTCATTTGTCACTCTATG +
Preference number: 4 (lower is better)
Translates to: PLKPIGNPGPLVCVLVHLVIIHR*LICHSM
Trigger: CATAGAGTGACAAATGAGCCATCTGTGGATAATCAC...AAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATACCAGGATTTCCATGTaGCCCTGGTATGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDTRISM*PWYAPW
Trigger: CCACGGGGCATACCAGGGCCACATGGAAATCCTGGT...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTAGGAACAGGTTGACCTaGGGAAAATCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIRNRLT*GKSWIS
Trigger: GGAGATCCAGGATTTTCCCCAGGTCAACCTGTTCCT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAATTACCAGCAAATCCTaGAATTCCTTGTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKITSKS*NSLFTW
Trigger: CCAGGTGAACAAGGAATTCCAGGATTTGCTGGTAAT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAAAATCCCAATATCTCCTaGAAAACCCTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQNPNIS*KTLWSW
Trigger: CCAGGACCAGAGGGTTTTCCAGGAGATATTGGGATT...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAACTCCTTTTTCACCCTTaGCACCTTGTATACCTTGTT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKLLFHP*HLVYLV
Trigger: AACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAG...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACATCCATTTGCTTTCTTaGGCCTGGTGCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNIHLLS*AWCSRW
Trigger: CCACCTGGAGCACCAGGCCCAAGAAAGCAAATGGAT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCGGAGGTAAGCATGTCTaGCCACCAGCACTGAAATTG +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSGGKHV*PPALKL
Trigger: CAATTTCAGTGCTGGTGGCCAGACATGCTTACCTCC...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCAATAGTAATGGCAAATaGGTGCCATTGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFNSNGK*VPLLIM
Trigger: CATGATGAGCAATGGCACTCATTTGCCATTACTATT...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGTATCTTTGTTGGTATaGGAGTTGTACAAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKVSLLV*ELYKEC
Trigger: GCATTCCTTGTACAACTCTCATACCAACAAAGATAC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTAATCCAGAAAGGCCTTaGTCACCCTTTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIINPERP*SPFSPG
Trigger: TCCTGGAGAAAAGGGTGATCAAGGCCTTTCTGGATT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGTGCCAGCTGCCATCTTaGATCTTGCAGTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMCQLPS*ILQSSE
Trigger: TTCAGATGACTGCAAGATTCAAGATGGCAGCTGGCA...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGAAGCCAACTCTGAACTaGTTAGGGTGCAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMKPTLN*LGCRYC
Trigger: ACAGTACCTGCACCCTAAGCAGTTCAGAGTTGGCTT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCGTATGCATTTGTCCGTaGAGCAAAGCGCTAACGGAA +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSVCICP*SKALTE
Trigger: TTCCGTTAGCGCTTTGCTGCACGGACAAATGCATAC...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TCAGATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGATGAAGAATATCTATaGCTTGTTCTTGTGCATGAA +
Preference number: 4 (lower is better)
Translates to: SDPLSPFSPCSPWSPGSPDEEYL*LVLVHE
Trigger: TTCATGCACAAGAACAAGGCATAGATATTCTTCATC...AGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAATATTGTAAACGGCTaGCCCAAGTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKNIVNG*PKLTGK
Trigger: TTTACCAGTCAACTTGGGGCAGCCGTTTACAATATT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAGGTTGGTATTTGTCTaGTTGGCGACACTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVRLVFV*LATLLF
Trigger: AAACAGCAGTGTCGCCAAGCAGACAAATACCAACCT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTTTTGGTATTCATTTTTaGCTCACTGATGCGATGAGT +
Preference number: 4 (lower is better)
Translates to: LAIPSLETNRQSWATCLCFGIHF*LTDAMS
Trigger: ACTCATCGCATCAGTGAGGCAAAAATGAATACCAAA...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCTAGCTCTCCTGCTGTaGCTTGTTCACCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNLALLL*LVHPYH
Trigger: GTGATAAGGGTGAACAAGGCACAGCAGGAGAGCTAG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCATGGTATCCTTGTATaGCTTTTGGCCCAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSHGILV*LLAQVG
Trigger: GCCTACTTGGGCCAAAAGGCATACAAGGATACCATG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCCTGATATCCCAACAATaGCAGCATCCCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKALISQQ*QHPLQD
Trigger: GTCCTGAAGGGGATGCTGGCATTGTTGGGATATCAG...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGGTAATAATGGTGAATaGCTTTGTTACAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: LAIPSLETNRQSWATCLCGNNGE*LCYRNR
Trigger: CCTGTTTCTGTAACAAAGGCATTCACCATTATTACC...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR GCA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGTAGGACTATCATGCTaGTCTTTATTAGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LAIPSLETNRQSWATCLCVGLSC*SLLEVH
Trigger: ATGAACCTCTAATAAAGAGCAGCATGATAGTCCTAC...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCCCACGCCTTGTTCTGTaGGCTCTTAAATGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIPRLVL*ALKCIC
Trigger: ACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGG...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTCCAGTGTCTCCTTTTaGCCCTCTCAGATACTCCAT +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSSSVSF*PSQILH
Trigger: ATGGAGTATCTGAGAGGGCCAAAAGGAGACACTGGA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTATCTCCCTTTGCACCTaGTTCACCTTGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILISLCT*FTLQTR
Trigger: TCTGGTCTGCAAGGTGAACCAGGTGCAAAGGGAGAT...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATTCCAACTTCTCCTGTaGGTCCTATTTGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKFQLLL*VLFVLY
Trigger: ATAAAGGACAAATAGGACCCACAGGAGAAGTTGGAA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGTCCTTGTTGTCCAGTaGCACCTCTTAGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTVLVVQ*HLLVLV
Trigger: TACCAGGACTAAGAGGTGCCACTGGACAACAAGGAC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGGACCTTTAGGGCCTaGGAATCCTTGGAAACCTGT +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTRTFRA*ESLETC
Trigger: ACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCT...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTACCAATAGGCAATCCTaGGCCACTTGTTTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIITNRQS*ATCLCA
Trigger: AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGTTCTCTGGTCTTCCTTaGGTTGAGTTTATGAATCAA +
Preference number: 4 (lower is better)
Translates to: LETNRQSWATCLCACPPWFSGLP*VEFMNQ
Trigger: TTGATTCATAAACTCAACCCAAGGAAGACCAGAGAA...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR TCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAGAGTATCTTCCTCAGTaGTCATTTCTTTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVEYLPQ*SFLWPE
Trigger: TTCAGGCCAAAGAAATGATCACTGAGGAAGATACTC...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTTTTCCAGGGTTTCCTaGAATGCCATCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNFSRVS*NAICSM
Trigger: CATGGAGCAGATGGCATTTCAGGAAACCCTGGAAAA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAGGTAGTTCAGGGTTTTaGATATCTCTTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVGSSGF*ISLHCG
Trigger: ACCACAGTGAAGAGATATTCAAAACCCTGAACTACC...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTAACCTCAATGGCATCTaGAGGACAGCCAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: VNEGSSSGLSQLQTPTSINLNGI*RTAKIW
Trigger: CCAAATCTTGGCTGTCCTTCAGATGCCATTGAGGTT...AATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR GCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAGCACTCAAGTTCACTTaGGGTTCAAAGGCGACTCTG +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTALKFT*GSKATL
Trigger: CAGAGTCGCCTTTGAACCGCAAGTGAACTTGAGTGC...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTAAGCCAACTCTGAACTaGTTAGGGTGCAGGTACTGT +
Preference number: 4 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILKPTLN*LGCRYC
Trigger: ACAGTACCTGCACCCTAAGCAGTTCAGAGTTGGCTT...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTATGCCTTGTTCTTGTaGATGAACAACCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNYALFL*MNNHPS
Trigger: GCTGGGGTGGTTGTTCATGCACAAGAACAAGGCATA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp AGTTTTGAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTTGATTAGGTTCCTACAAGTCCAGGACTaGCATCAAGACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFEMRKFLYFNHWKLIRFLQVQD*HQDQQG
Trigger: GCCCTGCTGGTCTTGATGGCAGTCCTGGACTTGTAG...GAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACACTGATATCCCAACAATaGCAGCATCCCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTLISQQ*QHPLQD
Trigger: GTCCTGAAGGGGATGCTGGCATTGTTGGGATATCAG...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCTATTATACCTTCTCTaGCAAGGGGACCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSLLYLL*QGDQCF
Trigger: GAAACACTGGTCCCCTTGGCAGAGAAGGTATAATAG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTGCATTGATATCCATTTaGTTTCTTGGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIALISI*FLGPGA
Trigger: AGCACCAGGCCCAAGAAAGCAAATGGATATCAATGC...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTCTTATTTCTCCCTCTaGAGCAATTACCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSSYFSL*SNYLAN
Trigger: GTTGGCCAGGTAATTGCTGCAGAGGGAGAAATAAGA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCTGCTCCATAGTGCTCTaGATCTCCAGCTGTCTAATG +
Preference number: 4 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKACSIVL*ISSCLM
Trigger: CATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAATTTAGACAGAAGCAGTaGACATCTGGAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQFRQKQ*TSGSIS
Trigger: GCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTCCACGCCTTGTTCTGTaGGCTCTTAAATGCATTTGT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIPRLVL*ALKCIC
Trigger: ACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGG...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAATGCTTGTTTCAGGTTaGTATTTGTCTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVMLVSG*YLSAWR
Trigger: TCGCCAAGCAGACAAATACCAACCTGAAACAAGCAT...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAGTCTCCAAAGTCACCTaGAAAACCCTGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTVSKVT*KTLSPL
Trigger: AAGGGGAGACAGGGTTTTCCAGGTGACTTTGGAGAC...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACAATCCCAATATCTCCTaGAAAACCCTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNNPNIS*KTLWSW
Trigger: CCAGGACCAGAGGGTTTTCCAGGAGATATTGGGATT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACAACCCCAGGAGGACCTaGATATCCCATAACACCTTT +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNNPRRT*ISHNTF
Trigger: AAAGGTGTTATGGGATATCCAGGTCCTCCTGGGGTT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACGACCTCTTTGCCCTaGAATTCCCACAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNTTSLP*NSHNSF
Trigger: GAAGGAATTGTGGGAATTCCAGGGCAAAGAGGTCGT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTACGACCTCTTTGCCCTaGAATTCCCACAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTTTSLP*NSHNSF
Trigger: GAAGGAATTGTGGGAATTCCAGGGCAAAGAGGTCGT...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTTCTCCTTTAGGTCCTaGCAATCCAGAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDFSFRS*QSRGSW
Trigger: CCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAGGACCTTTAGGGCCTaGGAATCCTTGGAAACCTGT +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTRTFRA*ESLETC
Trigger: ACAGGTTTCCAAGGATTCCCAGGCCCTAAAGGTCCT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATCCCTGGTTGACCTCTTaGTCCTTGAGGACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDPWLTS*SLRTSF
Trigger: GAAACTGGTCCTCAAGGACCAAGAGGTCAACCAGGG...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAGGACAGCCAAGATTTaGGTCAATCCAGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVRTAKI*VNPVFS
Trigger: GGAAAATACTGGATTGACCCAAATCTTGGCTGTCCT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAATAGTAATGGCAAATaGGTGCCATTGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVNSNGK*VPLLIM
Trigger: CATGATGAGCAATGGCACTCATTTGCCATTACTATT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCGTATCTTTGTTGGTATaGGAGTTGTACAAGGAATGC +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIVSLLV*ELYKEC
Trigger: GCATTCCTTGTACAACTCTCATACCAACAAAGATAC...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAGGGGTGTTTAGACAGTaGATGGTGATGATATGGGTG +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTGVFRQ*MVMIWV
Trigger: CACCCATATCATCACCATTCACTGTCTAAACACCCC...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCAATCTTGCAGTCATCTaGAAGCACTTTAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAINLAVI*KHFRFK
Trigger: CTTGAACCTAAAGTGCTTTCAGATGACTGCAAGATT...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACAGTGTCTTACGTCTTTaGCTCCAAGGCCTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNSVLRL*LQGLVD
Trigger: ATCAACTAGGCCTTGGAGGCAAAGACGTAAGACACT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACATATCTGCAGTAGTCTaGAGATGCTTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNISAVV*RCFCRR
Trigger: CCTTCTGCAGAAGCATCTGCAGACTACTGCAGATAT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTGCTGTTTCACATATCTaGAGTAGTCTGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIAVSHI*SSLQML
Trigger: AAGCATCTGCAGACTACTGCAGATATGTGAAACAGC...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCGCCAATAAAACCTTGTaGACCTTTAGGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSANKTL*TFRTWI
Trigger: AATCCAGGTCCTAAAGGTGCACAAGGTTTTATTGGC...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR GCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATCCTTGATCACCTTGTaGTCCTCGGTGACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTSLITL*SSVTSF
Trigger: AAAAGAGGTCACCGAGGAGCACAAGGTGATCAAGGA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAATTCCGGTATCTTTGTTaGTATGAGAGTTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQFRYLC*YESCTR
Trigger: CCTTGTACAACTCTCATACCAACAAAGATACCGGAA...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGTGATTATCCACAGATaGCTCATTTGTCACTCTATG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVVIIHR*LICHSM
Trigger: CATAGAGTGACAAATGAGCCATCTGTGGATAATCAC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAACCCATCTTTTCCCTaGAGACCTTCTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTNPSFP*RPSSPG
Trigger: TCCTGGAGAAGAAGGTCTCCAGGGAAAAGATGGGTT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATTCCAACTTCTCCTGTaGGTCCTATTTGTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVFQLLL*VLFVLY
Trigger: ATAAAGGACAAATAGGACCCACAGGAGAAGTTGGAA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGATGCCATCTGCTCCATaGTATCCTTGTATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMMPSAP*YPCMPF
Trigger: AAAAGGCATACAAGGATACCATGGAGCAGATGGCAT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGTCCAGTTCTACCTGTTaGGCCTATTATACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMSSSTC*AYYTFS
Trigger: AGAGAAGGTATAATAGGCCCAACAGGTAGAACTGGA...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATTTGCAGATTCGTGCTaGGTTATCTCGTGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTFADSC*VISCAK
Trigger: CTTGGCACACGAGATAACCCAGCACGAATCTGCAAA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAATAAAATGAAGAAGTaGTTTCGTTTTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVNKMKK*FRFCRG
Trigger: CCCACGGCAAAAACGAAATCACTTCTTCATTTTATT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR TCA 90 bp GGGTTATCTCGTGTGCCAAGAGGATTCTTGATGCTGTGCAATAAATTGCTAAGGAATAAAATGAAGAAGTaGTTTCGTTTTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLSRVPRGFLMLCNKLLRNKMKK*FRFCRG
Trigger: CCCACGGCAAAAACGAAATCACTTCTTCATTTTATT...CCTTAGCAATTTATTGCACAGCATCAAGAATCCTCTTGGCACACGAGATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATTAGAATCAAAGGTCTaGACTTCTGGAATAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVLESKV*TSGIVS
Trigger: AGAGACTATTCCAGAAGTTCAGACCTTTGATTCTAA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTTTCCTTAGATCAAGGTaGTTATCCACAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILFLRSR*LSTDGS
Trigger: TGAGCCATCTGTGGATAATCACCTTGATCTAAGGAA...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGACAATGTGCTGGCTTTaGTTCCAAATACACAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMTMCWL*FQIHKE
Trigger: CTCTTTGTGTATTTGGAATCAAAGCCAGCACATTGT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACGCCAATAAAACCTTGTaGACCTTTAGGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNANKTL*TFRTWI
Trigger: AATCCAGGTCCTAAAGGTGCACAAGGTTTTATTGGC...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTGCTCCATAGTGCTCTaGATCTCCAGCTGTCTAATG +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDCSIVL*ISSCLM
Trigger: CATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTTTAGACAGAAGCAGTaGACATCTGGAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNFRQKQ*TSGSIS
Trigger: GCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CCA 90 bp GTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTTATGCCAACTTCCACTaGAATGAGGATGATGATGTG +
Preference number: 4 (lower is better)
Translates to: VNEGSSSGLSQLQTPTSIYANFH*NEDDDV
Trigger: CACATCATCATCCTCATTCCAGTGGAAGTTGGCATA...AATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR TCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAGGCTGAAATTTGTCTaGGTATCTTCCTCAGTGATC +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTRLKFV*VSSSVI
Trigger: GATCACTGAGGAAGATACTCAGACAAATTTCAGCCT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATGGTCACTGACAGGCTaGAATTTGTCTGAGTATCTT +
Preference number: 4 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTWSLTG*NLSEYL
Trigger: AAGATACTCAGACAAATTTCAGCCTGTCAGTGACCA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATAAACCTGTCAAACCTTaGACACCATATTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDKPVKP*TPYSPG
Trigger: GCCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTT...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGATTCAATCAAGGCTTaGATAGCAGCATTGATATCC +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTDSIKA*IAALIS
Trigger: GGATATCAATGCTGCTATTCAAGCCTTGATTGAATC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGAATATTGTAAACGGCTaGCCCAAGTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGNIVNG*PKLTGK
Trigger: TTTACCAGTCAACTTGGGGCAGCCGTTTACAATATT...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTTTGGTATTCATTTTTaGCTCACTGATGCGATGAGT +
Preference number: 4 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSFGIHF*LTDAMS
Trigger: ACTCATCGCATCAGTGAGGCAAAAATGAATACCAAA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CCA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGACTTTAAAAACAGTATaGCACAACCCCCAATCTGTA +
Preference number: 4 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMTLKTV*HNPQSV
Trigger: TACAGATTGGGGGTTGTGCCATACTGTTTTTAAAGT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370571.7
3UTR CAA 72 bp CCATCTGATACTTTTTGTTCACAGTTAAGTAAATCTTaGCAGATTCGTGCTGGGTTATCTCGTGTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PSDTFCSQLSKS*QIRAGLSRVPR
Trigger: TCTTGGCACACGAGATAACCCAGCACGAATCTGCAAAGATTTACTTAACTGTGAACAAAAAGTATCAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTTAGAATCAAAGGTCTaGACTTCTGGAATAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGLESKV*TSGIVS
Trigger: AGAGACTATTCCAGAAGTTCAGACCTTTGATTCTAA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR TCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTTCCTTAGATCAAGGTaGTTATCCACAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDFLRSR*LSTDGS
Trigger: TGAGCCATCTGTGGATAATCACCTTGATCTAAGGAA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTGCCAAGAGGATTCTTaGTGCTGTGCAATAAATTGC +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDCQEDS*CCAINC
Trigger: GCAATTTATTGCACAGCATCAAGAATCCTCTTGGCA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCGTTCAGTTTTGAGATaGGGAAGTTTTTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNRSVLR*GSFCTS
Trigger: TGAAGTACAAAAACTTCCTCATCTCAAAACTGAACG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR TCA 90 bp GTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTTGGTCTTCCTTGGGTTaGGTTTATGAATCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VNEGSSSGLSQLQTPTSIWSSLG*VYESKK
Trigger: TTTCTTTGATTCATAAACTCAACCCAAGGAAGACCA...AATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR GCA 90 bp AGTTTTGAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTTGATTAGGTTCATATCTGCAGTAGTCTaGAGATGCTTCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFEMRKFLYFNHWKLIRFISAVV*RCFCRR
Trigger: CCTTCTGCAGAAGCATCTGCAGACTACTGCAGATAT...GAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
3UTR CAA 72 bp GAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTaGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: EMRKFLYFNHWK*IRFLGVKKKCC
Trigger: GCAACATTTCTTTTTCACACCCAGGAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACGATGAAGAATATCTATaGCTTGTTCTTGTGCATGAA +
Preference number: 4 (lower is better)
Translates to: EIVYESHKHLVFERAPSNDEEYL*LVLVHE
Trigger: TTCATGCACAAGAACAAGGCATAGATATTCTTCATC...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTGCCATCTTGAATCTTaGAGTCATCTGAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDCHLES*SHLKAL
Trigger: AAGTGCTTTCAGATGACTGCAAGATTCAAGATGGCA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR GCA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGAAAGCATACAGAACTaGTGTCAATGTAATACTTTC +
Preference number: 4 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTESIQN*CQCNTF
Trigger: GAAAGTATTACATTGACAGCAGTTCTGTATGCTTTC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp AGTTTTGAGATGAGGAAGTTTTTGTACTTCAATCACTGGAAGTTGATTAGGTTCCTGTGGGCTCTTAAATaGATTTGTATGCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SFEMRKFLYFNHWKLIRFLWALK*ICMHLS
Trigger: GGACAAATGCATACAAATGCATTTAAGAGCCCACAG...GAACCTAATCAACTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTCAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR GCA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATGAAAGCATACAGAACTaGTGTCAATGTAATACTTTC +
Preference number: 4 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDESIQN*CQCNTF
Trigger: GAAAGTATTACATTGACAGCAGTTCTGTATGCTTTC...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS GCA 90 bp GTGGGCCTCGCGCGGTGGCAGAGGGAAAGCCCTCGGGGCAGGAGCTaGAGGAGGGCCGCATGCGGAGGCTGGCTGGGCAAGAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VGLARWQRESPRGRS*RRAACGGWLGKKWR
Trigger: CCTCCACTTCTTGCCCAGCCAGCCTCCGCATGCGGCCCTCCTGCAGCTCCTGCCCCGAGGGCTTTCCCTCTGCCACCGCGCGAGGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp AGGGCGGCGGGAGCTGGAGCCAGAGAGATCGTCGGAGCCCAGCTCTaGAGCTTAGGGAGCCGCTGCCCTGGACCTCGGGACTCGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RAAGAGAREIVGAQL*SLGSRCPGPRDSRQ
Trigger: CTGGCGCGAGTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCGACGATCTCTCTGGCTCCAGCTCCCGCCGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp GCCCTCGGGGCAGGAGCTGCAGGAGGGCCGCATGCGGAGGCTGGCTaGGCAAGAAGTGGAGGGCCTCACTCCGCCTCTCCTGGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: ALGAGAAGGPHAEAG*ARSGGPHSASPGVS
Trigger: GGAGACTCCAGGAGAGGCGGAGTGAGGCCCTCCACTTCTTGCCCAGCCAGCCTCCGCATGCGGCCCTCCTGCAGCTCCTGCCCCGAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 90 bp CCTGGGGGACCTCTAGCGTCACAGCAATCGCCAGGCTGGACGCCCTaGGAAGCACCTCGGGGAAGCAGGACCTCGACAGGGCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PGGPLASQQSPGWTP*EAPRGSRTSTGPCG
Trigger: CCCGCAGGGCCCTGTCGAGGTCCTGCTTCCCCGAGGTGCTTCTCAGGGCGTCCAGCCTGGCGATTGCTGTGACGCTAGAGGTCCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp GAAAGCCCTCGGGGCAGGAGCTGCAGGAGGGCCGCATGCGGAGGCTaGCTGGGCAAGAAGTGGAGGGCCTCACTCCGCCTCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: ESPRGRSCRRAACGG*LGKKWRASLRLSWS
Trigger: ACTCCAGGAGAGGCGGAGTGAGGCCCTCCACTTCTTGCCCAGCCAGCCTCCGCATGCGGCCCTCCTGCAGCTCCTGCCCCGAGGGCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp GGAGGCTGGCTGGGCAAGAAGTGGAGGGCCTCACTCCGCCTCTCCTaGAGTCTCCAGGCTGGCAGGGCTAGAGCCTCTCTGCATCCGCCC +
Preference number: 5 (lower is better)
Translates to: GGWLGKKWRASLRLS*SLQAGRARASLHPP
Trigger: GGGCGGATGCAGAGAGGCTCTAGCCCTGCCAGCCTGGAGACTCCAGGAGAGGCGGAGTGAGGCCCTCCACTTCTTGCCCAGCCAGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp CAACTACCAAGGGGAGTGTTAGTCACCAGCGTGGGCCTCGCGCGGTaGCAGAGGGAAAGCCCTCGGGGCAGGAGCTGCAGGAGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: QLPRGVLVTSVGLAR*QRESPRGRSCRRAA
Trigger: TGCGGCCCTCCTGCAGCTCCTGCCCCGAGGGCTTTCCCTCTGCCACCGCGCGAGGCCCACGCTGGTGACTAACACTCCCCTTGGTAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 90 bp CATGCGACCTGCGTGAGCCGCTCTGAGAAGGCAACCCGCAGAGCTTaGCCTCTACTCGCTCCAGGGACTCCCCAGCCTCCAGCACCCCGC +
Preference number: 5 (lower is better)
Translates to: HATCVSRSEKATRRA*PLLAPGTPQPPAPR
Trigger: GCGGGGTGCTGGAGGCTGGGGAGTCCCTGGAGCGAGTAGAGGTCAAGCTCTGCGGGTTGCCTTCTCAGAGCGGCTCACGCAGGTCGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 90 bp GCCAGAGAGATCGTCGGAGCCCAGCTCTGGAGCTTAGGGAGCCGCTaGCCTGGACCTCGGGACTCGCGCCAGCGAGCTTTTCCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: AREIVGAQLWSLGSR*PGPRDSRQRAFPLE
Trigger: CTCGAGAGGAAAAGCTCGCTGGCGCGAGTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCGACGATCTCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 90 bp AGGGGTCGGAAGAGAGCGCGCGCGCGAGCCCCAGCCAGGCTGGGCTaGACGCGGCTGGGAAGCACATGTTCATACAAACACGACCACAAG +
Preference number: 5 (lower is better)
Translates to: RGRKRARARAPARLG*TRLGSTCSYKHDHK
Trigger: CTTGTGGTCGTGTTTGTATGAACATGTGCTTCCCAGCCGCGTGCAGCCCAGCCTGGCTGGGGCTCGCGCGCGCGCTCTCTTCCGACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTCGAACGAGCCCAGGGTaGCGCTCCCCGGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFRTSPG*RSPGRA
Trigger: CGCCCTCCCCGGGGAGCGCAACCCTGGGCTCGTTCG...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS CCA 90 bp AGAGATCGTCGGAGCCCAGCTCTGGAGCTTAGGGAGCCGCTGCCCTaGACCTCGGGACTCGCGCCAGCGAGCTTTTCCTCTCGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: RDRRSPALELREPLP*TSGLAPASFSSRAK
Trigger: TTTGGCTCGAGAGGAAAAGCTCGCTGGCGCGAGTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCGACGATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp AGAGAGCGCGCGCGCGAGCCCCAGCCAGGCTGGGCTGCACGCGGCTaGGAAGCACATGTTCATACAAACACGACCACAAGGCGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RERAREPQPGWAARG*EAHVHTNTTTRRSF
Trigger: GAAAGAGCGCCTTGTGGTCGTGTTTGTATGAACATGTGCTTCCCAGCCGCGTGCAGCCCAGCCTGGCTGGGGCTCGCGCGCGCGCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 90 bp GGAGTCTCCAGGCTGGCAGGGCTAGAGCCTCTCTGCATCCGCCCCTaGTCAGCGGGAAGATCTGTCAGTTCCGCAGGATCGGCTGCAACC +
Preference number: 5 (lower is better)
Translates to: GVSRLAGLEPLCIRP*SAGRSVSSAGSAAT
Trigger: GGTTGCAGCCGATCCTGCGGAACTGACAGATCTTCCCGCTGATCAGGGGCGGATGCAGAGAGGCTCTAGCCCTGCCAGCCTGGAGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 90 bp TCACCCTTCTCGCCCAGGGGCCAGAAGCAAACTTGTGTAACCCACTaGCCTCTTCCAGGGGGACCAGGGCATCCAGCCAAAGCCGCGCAA +
Preference number: 5 (lower is better)
Translates to: SPFSPRGQKQTCVTH*PLPGGPGHPAKAAQ
Trigger: TTGCGCGGCTTTGGCTGGATGCCCTGGTCCCCCTGGAAGAGGTCAGTGGGTTACACAAGTTTGCTTCTGGCCCCTGGGCGAGAAGGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 90 bp CCGCCCCTGATCAGCGGGAAGATCTGTCAGTTCCGCAGGATCGGCTaGAACCCCCGACTCTCCAGGCTGGTCCACACAGAGGGATGTTTA +
Preference number: 5 (lower is better)
Translates to: PPLISGKICQFRRIG*NPRLSRLVHTEGCL
Trigger: TAAACATCCCTCTGTGTGGACCAGCCTGGAGAGTCGGGGGTTGCAGCCGATCCTGCGGAACTGACAGATCTTCCCGCTGATCAGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp GGCAATGATCAGGGCGCAGCCTCGGCTCGGATGGGCAACGTTTGTTaGCCTTCTAACCAGAGGGGATTGCCTCTGAGCCCGTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: GNDQGAASARMGNVC*PSNQRGLPLSPWVK
Trigger: TTTTACCCACGGGCTCAGAGGCAATCCCCTCTGGTTAGAAGGCCAACAAACGTTGCCCATCCGAGCCGAGGCTGCGCCCTGATCATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp CACAGAGGGATGTTTATCGAGAACAGTGGCGGGAAATCTTCTGCCTaGGAACCCCATGCGACCTGCGTGAGCCGCTCTGAGAAGGCAACC +
Preference number: 5 (lower is better)
Translates to: HRGMFIENSGGKSSA*EPHATCVSRSEKAT
Trigger: GGTTGCCTTCTCAGAGCGGCTCACGCAGGTCGCATGGGGTTCCCAGGCAGAAGATTTCCCGCCACTGTTCTCGATAAACATCCCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp TCTGTCAGTTCCGCAGGATCGGCTGCAACCCCCGACTCTCCAGGCTaGTCCACACAGAGGGATGTTTATCGAGAACAGTGGCGGGAAATC +
Preference number: 5 (lower is better)
Translates to: SVSSAGSAATPDSPG*STQRDVYREQWREI
Trigger: GATTTCCCGCCACTGTTCTCGATAAACATCCCTCTGTGTGGACCAGCCTGGAGAGTCGGGGGTTGCAGCCGATCCTGCGGAACTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCGAACGAGCCCAGGGTaGCGCTCCCCGGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVRTSPG*RSPGRA
Trigger: CGCCCTCCCCGGGGAGCGCAACCCTGGGCTCGTTCG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCAGGGCCTGGGAATCCTaGGAAACCTGTCAAACCTTG +
Preference number: 5 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPRAWES*ETCQTL
Trigger: CAAGGTTTGACAGGTTTCCAAGGATTCCCAGGCCCT...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS GCA 90 bp CATGTTCATACAAACACGACCACAAGGCGCTCTTTCTCCGCACCCTaGCTCCGCCTGCCCTCAGCTGACACGGTCAATTCTGTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: HVHTNTTTRRSFSAP*LRLPSADTVNSVPC
Trigger: GCAAGGAACAGAATTGACCGTGTCAGCTGAGGGCAGGCGGAGGCAGGGTGCGGAGAAAGAGCGCCTTGTGGTCGTGTTTGTATGAACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCAAACCAACAGCACCCTaGTCTCCAGGATACCCGGGT +
Preference number: 5 (lower is better)
Translates to: WVALFSFRSWQSRGSWLAKPTAP*SPGYPG
Trigger: ACCCGGGTATCCTGGAGACAAGGGTGCTGTTGGTTT...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCCCACAGATGGCTCATTaGTCACTCTATGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPPQMAH*SLYASL
Trigger: CAAGCTTGCATAGAGTGACAAATGAGCCATCTGTGG...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCTCTCTCCTGCTGTGCCTaGTTCACCCTTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: GVLVVQWHLLVLVHPHGPLSCCA*FTLITF
Trigger: AAAGGTGATAAGGGTGAACAAGGCACAGCAGGAGAG...AGGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGGGCCAGATGGTCCTaGGAGTCCTGGGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVRARWS*ESWVTC
Trigger: ACAGGTGACCCAGGACTCCAAGGACCATCTGGCCCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTCCCAGGTGGTCCTCTaGCCCCCACATGACCAGGTA +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSQVVL*PPHDQV
Trigger: TACCTGGTCATGTGGGGGCAAGAGGACCACCTGGGA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGTTCACCCTTTGGGCCTaGAATTCCTGGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGFTLWA*NSWASW
Trigger: CCAGGAAGCCCAGGAATTCAAGGCCCAAAGGGTGAA...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCGTCCAGTTCTACCTGTaGGGCCTATTATACCTTCTC +
Preference number: 5 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPVQFYL*GLLYLL
Trigger: GAGAAGGTATAATAGGCCCAACAGGTAGAACTGGAC...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTTCCAGCAGGTCCAATaGGTCCCACAGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVFQQVQ*VPQGQH
Trigger: GTGTTGGCCCTGTGGGACCAATTGGACCTGCTGGAA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGAGGGCCAGATGGTCCTaGGAGTCCTGGGTCACCTGT +
Preference number: 5 (lower is better)
Translates to: WPFHPLKPIGNPGPLVCVRARWS*ESWVTC
Trigger: ACAGGTGACCCAGGACTCCAAGGACCATCTGGCCCT...CACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GGGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCGAAACCTGTCAAACCTaGAACACCATATTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGPCCPVAPLSPGTPTWPETCQT*NTIFSR
Trigger: CCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTTC...GGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS TCA 90 bp ATCTGCTGGCACGAGGCATCCTTTCAAACACGGTATTTTGCAAGCTaGGAAGACAAGGGGAAGATACCGCGGGTACTCGGCCGCTCGTTT +
Preference number: 5 (lower is better)
Translates to: ICWHEASFQTRYFAS*EDKGKIPRVLGRSF
Trigger: AAACGAGCGGCCGAGTACCCGCGGTATCTTCCCCTTGTCTTCTCAGCTTGCAAAATACCGTGTTTGAAAGGATGCCTCGTGCCAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 90 bp AGACAAGACAAAACCCAGGAGCAGATCTGCTTTAACTCCGGTGGTTaGTCACAACTACCAAGGGGAGTGTTAGTCACCAGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RQDKTQEQICFNSGG*SQLPRGVLVTSVGL
Trigger: GAGGCCCACGCTGGTGACTAACACTCCCCTTGGTAGTTGTGACCAACCACCGGAGTTAAAGCAGATCTGCTCCTGGGTTTTGTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp GGGGTCCTTGTTGTCCAGTGGCACCTCTTAGTCCTGGTACACCCACATGGCCCTAGACTTTTCCACGCCTaGTTCTGTGGGCTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: GVLVVQWHLLVLVHPHGPRLFHA*FCGLLN
Trigger: ATTTAAGAGCCCACAGAACAAGGCGTGGAAAAGTCT...AGGGCCATGTGGGTGTACCAGGACTAAGAGGTGCCACTGGACAACAAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCCTCCTTTGGGGCCCTTaGGACCAGGTAATCCAGGTA +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVLLWGP*DQVIQV
Trigger: TACCTGGATTACCTGGTCCAAAGGGCCCCAAAGGAG...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATTCGCCTGGGGGTCCTaGTTGTCCAGTGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKFAWGS*LSSGTS
Trigger: AGAGGTGCCACTGGACAACAAGGACCCCCAGGCGAA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCGCCCTGGTTGACCTCTaGGTCCTTGAGGACCAGTTT +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVALVDL*VLEDQF
Trigger: AAACTGGTCCTCAAGGACCAAGAGGTCAACCAGGGC...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CCTGGGCCGCCTCTGATGCCAGGAAGTCCCTGTTTTCCTGGTGGCCCAATTTTTCACTTGTTTGTGTGCTaGTCCACCTTGGGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: PGPPLMPGSPCFPGGPIFHLFVC*STLGCL
Trigger: TAAACACCCCAAGGTGGACAAGCACACAAACAAGTG...AAAAATTGGGCCACCAGGAAAACAGGGACTTCCTGGCATCAGAGGCGGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGAATCCTGGATCTCCTTaGGGGCCCTTTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LETNRQSWATCLCACPPWNPGSP*GPFGPG
Trigger: ACCTGGTCCAAAGGGCCCCAAAGGAGATCCAGGATT...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGAAATCCTGGAATTCCTaGTTCACCTGGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGKSWNS*FTWKSW
Trigger: CCAGGACTTCCAGGTGAACAAGGAATTCCAGGATTT...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCGCCCTTGTTCACCCTTaGGGCCTTGAATTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFALVHP*GLEFLG
Trigger: GCCCAGGAATTCAAGGCCCAAAGGGTGAACAAGGGC...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGTGGTCCTTGATCACCTaGTGCTCCTCGGTGACCTCT +
Preference number: 5 (lower is better)
Translates to: WPFHPLKPIGNPGPLVCVWSLIT*CSSVTS
Trigger: AGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCA...CACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTCTCCACATGGTCCTaGATCACCTTGTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGVSTWS*ITLCSS
Trigger: CGAGGAGCACAAGGTGATCAAGGACCATGTGGAGAC...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS GCA 90 bp AAGGCCTCTGGTGGTCATGGGAGACAAACACCTTCATCCAGAACCTaGTACTTATCCCCATGTCTCTGCACAAGGGTTCTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: KASGGHGRQTPSSRT*YLSPCLCTRVLFPF
Trigger: GAATGGGAAGAGAACCCTTGTGCAGAGACATGGGGATAAGTAGCAGGTTCTGGATGAAGGTGTTTGTCTCCCATGACCACCAGAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGGTCCAGTGTCTCCTTTaGGCCCTCTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGVQCLL*ALSDTP
Trigger: TGGAGTATCTGAGAGGGCCAAAAGGAGACACTGGAC...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTCCAGAGGGTCCTGGTaGGCCCTGATGGCCCCTGTA +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSSRGSW*ALMAPV
Trigger: TACAGGGGCCATCAGGGCCAACCAGGACCCTCTGGA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp CCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTTCCTGGGCCACTTGTTaGTGTGCTTGTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: PFHPLKPIGNPGPLVCVLSWATC*CACPPW
Trigger: CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGA...AAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS GCA 90 bp GCCGTGGGGGAGACTTTTCCACGCCTTGTTCTGTGGGCTCTTAAATaGATTTGTATGCATTTGTCCGTGCAGCAAAGCGCTAACGGAAAA +
Preference number: 5 (lower is better)
Translates to: AVGETFPRLVLWALK*ICMHLSVQQSANGK
Trigger: TTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGGAAAAGTCTCCCCCACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS-3UTR CAA 90 bp CCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCAAGCACTCAAGTTCACTaGCGGTTCAAAGGCGACTCT +
Preference number: 5 (lower is better)
Translates to: PSLETNRQSWATCLCACPSTQVH*RFKGDS
Trigger: AGAGTCGCCTTTGAACCGCAAGTGAACTTGAGTGCT...TGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTTGGTATTTGTCTGCTaGGCGACACTGCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVLVFVC*ATLLFH
Trigger: GTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTTTTTCAGCAAATAGTTaGGGCGGGGGAGAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LAIPSLETNRQSWATCLCFSANS*GGGECS
Trigger: GGAACACTCTCCCCCGCCCAAACTATTTGCTGAAAA...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAGAGCCAATAAAACCTaGTGCACCTTTAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVRANKT*CTFRTW
Trigger: CCAGGTCCTAAAGGTGCACAAGGTTTTATTGGCTCT...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGTCACCCTTATCACCTTaGATTCCAGGTAGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGSPLSP*IPGSPL
Trigger: TAAAGGACTACCTGGAATCAAAGGTGATAAGGGTGA...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTCCAGAGGGTCCTGGTaGGCCCTGATGGCCCCTGTA +
Preference number: 5 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGSRGSW*ALMAPV
Trigger: TACAGGGGCCATCAGGGCCAACCAGGACCCTCTGGA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATATCCATTTGCTTTCTaGGGCCTGGTGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKYPFAF*GLVLQV
Trigger: CACCTGGAGCACCAGGCCCAAGAAAGCAAATGGATA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGCTCCAAACTCCAACTTaGTTACAGAAACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGLQTPT*LQKQEV
Trigger: TACCTCCTGTTTCTGTAACAAAGTTGGAGTTTGGAG...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGGGTAGCCCTTTTCTCCTTTAGGTCCTGGCAATCCAGAGGGTCCTGGTTGGCCCAGAGCAAGACTCCATaGTTTCACCAATTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: WVALFSFRSWQSRGSWLAQSKTP*FHQFFQ
Trigger: TTGGAAAAATTGGTGAAACAATGGAGTCTTGCTCTG...GGCCAACCAGGACCCTCTGGATTGCCAGGACCTAAAGGAGAAAAGGGCTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGATCTATGCCTTGTTCTaGTGCATGAACAACCACCCC +
Preference number: 5 (lower is better)
Translates to: WPFHPLKPIGNPGPLVCVIYALF*CMNNHP
Trigger: GGGGTGGTTGTTCATGCACAAGAACAAGGCATAGAT...CACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAAAACCAACAGCACCCTaGTCTCCAGGATACCCGGGT +
Preference number: 5 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVKPTAP*SPGYPG
Trigger: ACCCGGGTATCCTGGAGACAAGGGTGCTGTTGGTTT...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCCCCCAAAGGCTCCAATaGGTCCTTCTTCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIPQRLQ*VLLLPE
Trigger: CTCAGGGAGAAGAAGGACCAATTGGAGCCTTTGGGG...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCTTCGCCTGGGGGTCCTaGTTGTCCAGTGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAFAWGS*LSSGTS
Trigger: AGAGGTGCCACTGGACAACAAGGACCCCCAGGCGAA...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CCCACAGCACCTCTAGTTCCTCTGGCACCCTTAGGACCACTTTTCCCAATTTTTATCCTTGTATGCCTTTaGGCCCAAGTAGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: PTAPLVPLAPLGPLFPIFILVCL*AQVGLE
Trigger: TTCAAGGCCTACTTGGGCCAAAAGGCATACAAGGAT...AAAAATTGGGAAAAGTGGTCCTAAGGGTGCCAGAGGAACTAGAGGTGCTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTTCACCCTTTGGGCCTaGAATTCCTGGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVFTLWA*NSWASW
Trigger: CCAGGAAGCCCAGGAATTCAAGGCCCAAAGGGTGAA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGGCACTTGTTTGTGTGCTaGTCCACCTTGGGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: LKPIGNPGPLVCVLVHLGHLFVC*STLGCL
Trigger: TAAACACCCCAAGGTGGACAAGCACACAAACAAGTG...CCCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CAA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATCCTGGGCCACTTGTTaGTGTGCTTGTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVSWATC*CACPPW
Trigger: CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTCCTGGGCCACTTGTTaGTGTGCTTGTCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSWATC*CACPPW
Trigger: CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGCAATCCTGGGCCACTaGTTTGTGTGCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVAILGH*FVCLST
Trigger: GGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCGCAATCCTGGGCCACTaGTTTGTGTGCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIAILGH*FVCLST
Trigger: GGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp ATCCTCTCTCTCCTTTTAGTCCTTGTTCACCCTGGTCACCTGGTTCGCCTGGGGGAGATGAGGAAGTTTTaGTACTTCAATCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: ILSLLLVLVHPGHLVRLGEMRKF*YFNHWK
Trigger: CTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTC...CCCCAGGCGAACCAGGTGACCAGGGTGAACAAGGACTAAAAGGAGAGAGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS GCA 90 bp ATCATCTGGACCCAATTTACAAACCCCAAACTGCCCAAGAATTTATaGAGGGCCTTTTCTGGGAGCGTCTGGAAGGGAAGTGTAAACCAG +
Preference number: 5 (lower is better)
Translates to: IIWTQFTNPKLPKNL*RAFSGSVWKGSVNQ
Trigger: CTGGTTTACACTTCCCTTCCAGACGCTCCCAGAAAAGGCCCTGCATAAATTCTTGGGCAGTTTGGGGTTTGTAAATTGGGTCCAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 90 bp GCCCCTGTAACAGAACAAATTGGATATTATGAGATAACCAAGGGCTaGAAGGCCTCTGGTGGTCATGGGAGACAAACACCTTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: APVTEQIGYYEITKG*KASGGHGRQTPSSR
Trigger: TCTGGATGAAGGTGTTTGTCTCCCATGACCACCAGAGGCCTTGCAGCCCTTGGTTATCTCATAATATCCAATTTGTTCTGTTACAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATGCATTTGTATGCATTaGTCCGTGCAGCAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKCICMH*SVQQSA
Trigger: AGCGCTTTGCTGCACGGACAAATGCATACAAATGCA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGTCCAGTGTCTCCTTTaGGCCCTCTCAGATACTCCA +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVVQCLL*ALSDTP
Trigger: TGGAGTATCTGAGAGGGCCAAAAGGAGACACTGGAC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCTCCTTTGGGGCCCTTaGGACCAGGTAATCCAGGTA +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSLLWGP*DQVIQV
Trigger: TACCTGGATTACCTGGTCCAAAGGGCCCCAAAGGAG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTGATTAGGTTCCTGGGTGTGAAAAAGAAATGTTGCCTTATGCCAGCTGCCATCTTCTCCAGGAACAGGTaGACCTGGGGAAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: LIRFLGVKKKCCLMPAAIFSRNR*TWGKSW
Trigger: CCAGGATTTTCCCCAGGTCAACCTGTTCCTGGAGAA...GATGGCAGCTGGCATAAGGCAACATTTCTTTTTCACACCCAGGAACCTAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTTCCAGCAGGTCCAATaGGTCCCACAGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGFQQVQ*VPQGQH
Trigger: GTGTTGGCCCTGTGGGACCAATTGGACCTGCTGGAA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTTCCAAGGAGTCCCTTaGGTCCTTCAGGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVFQGVP*VLQGRF
Trigger: AAAACGGCCCTGAAGGACCAAAGGGACTCCTTGGAA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGGTCCAACATCACCTaGCAGTCCTCGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTRSNIT*QSSQSW
Trigger: CCAGGACTGCGAGGACTGCAAGGTGATGTTGGACCT...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTGCACCTGGTTCACCTaGCAGACCAGACTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGCTWFT*QTRLSL
Trigger: GAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGCA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCGTCTCCACATGGTCCTaGATCACCTTGTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSVSTWS*ITLCSS
Trigger: CGAGGAGCACAAGGTGATCAAGGACCATGTGGAGAC...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCGTGCCAAGAGGATTCTaGATGCTGTGCAATAAATTG +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVVPRGF*MLCNKL
Trigger: CAATTTATTGCACAGCATCAAGAATCCTCTTGGCAC...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCCCACCAGCACTGAAATaGCAGAAAACCTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFPPALK*QKTSMA
Trigger: TGCCATTGAGGTTTTCTGCAATTTCAGTGCTGGTGG...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTGTTCCTGGCCCACCAGCACTGAAATaGCAGAAAACCTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: GSSSGLSQLQTPTSIVPGPPALK*QKTSMA
Trigger: TGCCATTGAGGTTTTCTGCAATTTCAGTGCTGGTGG...GCCAGGAACAATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS TCA 90 bp CCTTTGTTACAGAAACAGGAGGTAAGCATGTCTGGCCACCAGCACTaGAATTGCAGAAAACCTCAATGGCATCTGAAGGACAGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: PLLQKQEVSMSGHQH*NCRKPQWHLKDSQD
Trigger: ATCTTGGCTGTCCTTCAGATGCCATTGAGGTTTTCTGCAATTTCAGTGCTGGTGGCCAGACATGCTTACCTCCTGTTTCTGTAACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAACTGAAGAGAAATGCATaGTTCACCCGATGTGACTGT +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKLKRNA*FTRCDC
Trigger: ACAGTCACATCGGGTGAACAATGCATTTCTCTTCAG...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGTTTCAGGTTGGTATTaGTCTGCTTGGCGACACTGC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVVSGWY*SAWRHC
Trigger: GCAGTGTCGCCAAGCAGACAAATACCAACCTGAAAC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp CAGGCAATCCCTGTAAACCTGGTTTCCCTTGAAATCCTCTTTCTCCAGGGTTTCAATGCTTGTTTCAGGTaGGTATTTGTCTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: QAIPVNLVSLEILFLQGFNACFR*VFVCLA
Trigger: CGCCAAGCAGACAAATACCAACCTGAAACAAGCATT...GAAACCCTGGAGAAAGAGGATTTCAAGGGAAACCAGGTTTACAGGGATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACAATCCTGGATCTCCTTaGGGGCCCTTTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNNPGSP*GPFGPG
Trigger: ACCTGGTCCAAAGGGCCCCAAAGGAGATCCAGGATT...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAGTCCAGGATGTCCTTaGAGACCCTTATCACCTTGC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVSPGCP*RPLSPC
Trigger: GCAAGGTGATAAGGGTCTCAAAGGACATCCTGGACT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCCCCAAAGGCTCCAATaGGTCCTTCTTCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNPQRLQ*VLLLPE
Trigger: CTCAGGGAGAAGAAGGACCAATTGGAGCCTTTGGGG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCCAGGTGGTCCTCTaGCCCCCACATGACCAGGTA +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDSQVVL*PPHDQV
Trigger: TACCTGGTCATGTGGGGGCAAGAGGACCACCTGGGA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAGGTCCAACATCACCTaGCAGTCCTCGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTRSNIT*QSSQSW
Trigger: CCAGGACTGCGAGGACTGCAAGGTGATGTTGGACCT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATGCACCTGGTTCACCTaGCAGACCAGACTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTCTWFT*QTRLSL
Trigger: GAGGGAGAGTCTGGTCTGCAAGGTGAACCAGGTGCA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTCCTGTGGGTCCTATTaGTCCTTTATCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: AIPSLETNRQSWATCLCASCGSY*SFITLF
Trigger: AAAAAGGGTGATAAAGGACAAATAGGACCCACAGGA...AGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTAGGGCCTGGGAATCCTaGGAAACCTGTCAAACCTTG +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIRAWES*ETCQTL
Trigger: CAAGGTTTGACAGGTTTCCAAGGATTCCCAGGCCCT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGCAATCCTGGGCCACTaGTTTGTGTGCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTAILGH*FVCLST
Trigger: GGTGGACAAGCACACAAACAAGTGGCCCAGGATTGC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATTCAATCACTGGAAGTaGATTAGGTTCCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKFNHWK*IRFLGV
Trigger: CACACCCAGGAACCTAATCAACTTCCAGTGATTGAA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 90 bp AGACTTTTCCACGCCTTGTTCTGTGGGCTCTTAAATGCATTTGTATaGATTTGTCCGTGCAGCAAAGCGCTAACGGAAAACAGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: RLFHALFCGLLNAFV*ICPCSKALTENRSQ
Trigger: TTGGCTTCTGTTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGGAAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTTGGTATTTGTCTGCTaGGCGACACTGCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVLVFVC*ATLLFH
Trigger: GTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTTTTCAGCAAATAGTTaGGGCGGGGGAGAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIFSANS*GGGECS
Trigger: GGAACACTCTCCCCCGCCCAAACTATTTGCTGAAAA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TGCTCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCTCACTCTATGCAAGCTaGTGTTTAAAATTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: CSIVLCISSCLMGTTHSVSLYAS*CLKLVA
Trigger: TGCAACCAATTTTAAACACAAGCTTGCATAGAGTGA...GACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGCCACAGATGGCTCATTaGTCACTCTATGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVPQMAH*SLYASL
Trigger: CAAGCTTGCATAGAGTGACAAATGAGCCATCTGTGG...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTCCTTCAGGGCCGTTTaGTCCAGGAATCCCAATATC +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIISFRAV*SRNPNI
Trigger: GATATTGGGATTCCTGGACAAAACGGCCCTGAAGGA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTTCCAAGGAGTCCCTTaGGTCCTTCAGGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNFQGVP*VLQGRF
Trigger: AAAACGGCCCTGAAGGACCAAAGGGACTCCTTGGAA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTTTCCAACATCTCCCTTaGCACCTGGTTCACCTTGCA +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIFQHLP*HLVHLA
Trigger: TGCAAGGTGAACCAGGTGCAAAGGGAGATGTTGGAA...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGTGCTCCATGGTATCCTaGTATGCCTTTTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMCSMVS*YAFWPK
Trigger: CTTGGGCCAAAAGGCATACAAGGATACCATGGAGCA...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATGCCCTTGTTCACCCTTaGGGCCTTGAATTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDALVHP*GLEFLG
Trigger: GCCCAGGAATTCAAGGCCCAAAGGGTGAACAAGGGC...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGGTCCAGTTCTACCTGTaGGGCCTATTATACCTTCTC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVVQFYL*GLLYLL
Trigger: GAGAAGGTATAATAGGCCCAACAGGTAGAACTGGAC...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTTGACCTCTTGGTCCTaGAGGACCAGTTTCACCTCT +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSLTSWS*RTSFTS
Trigger: AGAGGTGAAACTGGTCCTCAAGGACCAAGAGGTCAA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTTGTCCACCTTGGCAGTTAAGTAAATCTTaGCAGATTCGTGCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: LETNRQSWATCLCACPPWQLSKS*QIRAGL
Trigger: TAACCCAGCACGAATCTGCAAAGATTTACTTAACTG...CCAAGGTGGACAAGCACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426639.5
ENST00000473734.1
CDS-3UTR CAA 90 bp GGGTTATCTCGTGTGCCAAGAGGATTCTTGATGCTGTGCAATAAATTGCTAAGGTGGCCATTCCATCCCTaGAAACCAATAGGCAATCCT +
Preference number: 5 (lower is better)
Translates to: GLSRVPRGFLMLCNKLLRWPFHP*KPIGNP
Trigger: AGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA...CCTTAGCAATTTATTGCACAGCATCAAGAATCCTCTTGGCACACGAGATAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAAAAGCCATAAGCACCTaGTTTTCGAAAGAGCACCAA +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKKAIST*FSKEHQ
Trigger: TTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTT...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS TCA 90 bp CAAATAGTTTGGGCGGGGGAGAGTGTTCCGGTATCTTTGTTGGTATaGGAGTTGTACAAGGAATGCTTGTTTCAGGTTGGTATTTGTCTG +
Preference number: 5 (lower is better)
Translates to: QIVWAGESVPVSLLV*ELYKECLFQVGICL
Trigger: CAGACAAATACCAACCTGAAACAAGCATTCCTTGTACAACTCTCATACCAACAAAGATACCGGAACACTCTCCCCCGCCCAAACTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp AACACAAAGAGGCAACACGTAAGAGGTAGTGTATCACCGGCTAAGATGTATATGATCTATGCCTTGTTCTaGTGCATGAACAACCACCCC +
Preference number: 5 (lower is better)
Translates to: NTKRQHVRGSVSPAKMYMIYALF*CMNNHP
Trigger: GGGGTGGTTGTTCATGCACAAGAACAAGGCATAGAT...CATATACATCTTAGCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCGTTTCAGGTTGGTATTaGTCTGCTTGGCGACACTGC +
Preference number: 5 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAVSGWY*SAWRHC
Trigger: GCAGTGTCGCCAAGCAGACAAATACCAACCTGAAAC...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGCCACTTGTTTGTGTGCTGTGATAGCCTTCTaGAGATTAGTAATTGTATCT +
Preference number: 5 (lower is better)
Translates to: LAIPSLETNRQSWATCLCAVIAF*RLVIVS
Trigger: AGATACAATTACTAATCTCAAGAAGGCTATCACAGC...ACACAAACAAGTGGCCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATTCTCCAGGAACAGGTaGACCTGGGGAAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTFSRNR*TWGKSW
Trigger: CCAGGATTTTCCCCAGGTCAACCTGTTCCTGGAGAA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCAAATCCTGGAATTCCTaGTTCACCTGGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSKSWNS*FTWKSW
Trigger: CCAGGACTTCCAGGTGAACAAGGAATTCCAGGATTT...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCTCTCCTGCTGTGCCTaGTTCACCCTTATCACCTTT +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNLSCCA*FTLITF
Trigger: AAAGGTGATAAGGGTGAACAAGGCACAGCAGGAGAG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCTCCTTCAGGGCCGTTTaGTCCAGGAATCCCAATATC +
Preference number: 5 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKASFRAV*SRNPNI
Trigger: GATATTGGGATTCCTGGACAAAACGGCCCTGAAGGA...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TATGGGTGGCTTCCGAACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAATCTCCTTTTTCACCCTaGGCACCTTGTATACCTTGT +
Preference number: 5 (lower is better)
Translates to: YGWLPNSVNEGSSSGLSQSPFSP*APCIPC
Trigger: ACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAGA...TTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTTCGGAAGCCACCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTACTTTAAAAATCTGGCCATTCCATCCCTTGAAACCAATAGGCAATCCTGGGTGCTCCATGGTATCCTaGTATGCCTTTTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: FTLKIWPFHPLKPIGNPGCSMVS*YAFWPK
Trigger: CTTGGGCCAAAAGGCATACAAGGATACCATGGAGCA...CCCAGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCAGATTTTTAAAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTGGTCCTTGATCACCTaGTGCTCCTCGGTGACCTCT +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDWSLIT*CSSVTS
Trigger: AGAGGTCACCGAGGAGCACAAGGTGATCAAGGACCA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTGTTCCTGGCCAGTTAAGTAAATCTTaGCAGATTCGTGCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: GSSSGLSQLQTPTSIVPGQLSKS*QIRAGL
Trigger: TAACCCAGCACGAATCTGCAAAGATTTACTTAACTG...GCCAGGAACAATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCCACTTGTTTGTGTGCTaGTCCACCTTGGGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSHLFVC*STLGCL
Trigger: TAAACACCCCAAGGTGGACAAGCACACAAACAAGTG...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 90 bp TATGAGAGTTGTACAAGGAATGCTTGTTTCAGGTTGGTATTTGTCTaGTTGGCGACACTGCTGTTTCACATATCTGCAGTAGTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: YESCTRNACFRLVFV*LATLLFHISAVVCR
Trigger: TCTGCAGACTACTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGTACAACTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAGCACTCAAGTTCACTaGCGGTTCAAAGGCGACTCT +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTSTQVH*RFKGDS
Trigger: AGAGTCGCCTTTGAACCGCAAGTGAACTTGAGTGCT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTAGACTTTTCCACGCCTaGTTCTGTGGGCTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIRLFHA*FCGLLN
Trigger: ATTTAAGAGCCCACAGAACAAGGCGTGGAAAAGTCT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCAATGCTTGTTTCAGGTaGGTATTTGTCTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSNACFR*VFVCLA
Trigger: CGCCAAGCAGACAAATACCAACCTGAAACAAGCATT...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATTGTACAAGGAATGCTaGTTTCAGGTTGGTATTTGT +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKLYKEC*FQVGIC
Trigger: ACAAATACCAACCTGAAACAAGCATTCCTTGTACAA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAATCATGTTGTGTGATATaGTCAGACATGTTTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKSCCVI*SDMFRR
Trigger: TCTCCTAAACATGTCTGACAATATCACACAACATGA...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TCCATAGTGCTCTGCATCTCCAGCTGTCTAATGGGTACTACGCACTCAGTCAAAGCTGTGATAGCCTTCTaGAGATTAGTAATTGTATCT +
Preference number: 5 (lower is better)
Translates to: SIVLCISSCLMGTTHSVKAVIAF*RLVIVS
Trigger: AGATACAATTACTAATCTCAAGAAGGCTATCACAGC...TTTGACTGAGTGCGTAGTACCCATTAGACAGCTGGAGATGCAGAGCACTATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACAAGTCCAGGATGTCCTTaGAGACCCTTATCACCTTGC +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTSPGCP*RPLSPC
Trigger: GCAAGGTGATAAGGGTCTCAAAGGACATCCTGGACT...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTAGAGCCAATAAAACCTaGTGCACCTTTAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILRANKT*CTFRTW
Trigger: CCAGGTCCTAAAGGTGCACAAGGTTTTATTGGCTCT...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTATCCTGTGGGTCCTATTaGTCCTTTATCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVSCGSY*SFITLF
Trigger: AAAAAGGGTGATAAAGGACAAATAGGACCCACAGGA...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTAGCATTTGGCCATTCCATCCCTaGAAACCAATAGGCAATCCT +
Preference number: 5 (lower is better)
Translates to: VNEGSSSGLSQLQTPTSIWPFHP*KPIGNP
Trigger: AGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA...AATGCTAGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS TCA 90 bp CTCTTTGGTATTCATTTTTGCCTCACTGATGCGATGAGTGGTCACTaGCAGGCTGAAATTTGTCTGAGTATCTTCCTCAGTGATCATTTC +
Preference number: 5 (lower is better)
Translates to: LFGIHFCLTDAMSGH*QAEICLSIFLSDHF
Trigger: GAAATGATCACTGAGGAAGATACTCAGACAAATTTCAGCCTGTCAGTGACCACTCATCGCATCAGTGAGGCAAAAATGAATACCAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 90 bp TTGTTCACCCGATGTGACTGTAACCCAGTTAATATTGTAAACGGCTaGCCCAAGTTGACTGGTAAAATTTTCACGAAAGGTGTCTCGATA +
Preference number: 5 (lower is better)
Translates to: LFTRCDCNPVNIVNG*PKLTGKIFTKGVSI
Trigger: TATCGAGACACCTTTCGTGAAAATTTTACCAGTCAACTTGGGGCAGCCGTTTACAATATTAACTGGGTTACAGTCACATCGGGTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACCTGAAGAGAAATGCATaGTTCACCCGATGTGACTGT +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNLKRNA*FTRCDC
Trigger: ACAGTCACATCGGGTGAACAATGCATTTCTCTTCAG...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTCTCCTTTTTCACCCTaGGCACCTTGTATACCTTGT +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNSPFSP*APCIPC
Trigger: ACAAGGTATACAAGGTGCCAAGGGTGAAAAAGGAGA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACGAAACCTGTCAAACCTaGAACACCATATTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNETCQT*NTIFSR
Trigger: CCTGGAGAATATGGTGTTCAAGGTTTGACAGGTTTC...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTACAGTTAAGTAAATCTTaGCAGATTCGTGCTGGGTTA +
Preference number: 5 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVQLSKS*QIRAGL
Trigger: TAACCCAGCACGAATCTGCAAAGATTTACTTAACTG...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACACCACCAGCACTGAAATaGCAGAAAACCTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTPPALK*QKTSMA
Trigger: TGCCATTGAGGTTTTCTGCAATTTCAGTGCTGGTGG...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTCTCCAAACTCCAACTTaGTTACAGAAACAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIILQTPT*LQKQEV
Trigger: TACCTCCTGTTTCTGTAACAAAGTTGGAGTTTGGAG...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp ATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCCAAATACATGGCCATTCCATCCCTaGAAACCAATAGGCAATCCT +
Preference number: 5 (lower is better)
Translates to: ILLRTSTGYNVLALIPNTWPFHP*KPIGNP
Trigger: AGGATTGCCTATTGGTTTCAAGGGATGGAATGGCCA...TGTATTTGGAATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp CATCTGAAGGACAGCCAAGATTTGGGTCAATCCAGTATTTTCCATCTGATACTTTTCAATCACTGGAAGTaGATTAGGTTCCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: HLKDSQDLGQSSIFHLILFNHWK*IRFLGV
Trigger: CACACCCAGGAACCTAATCAACTTCCAGTGATTGAA...AAGTATCAGATGGAAAATACTGGATTGACCCAAATCTTGGCTGTCCTTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp CATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACACAAAGAGGCAACACGTAGAGATGAGGAAGTTTTaGTACTTCAATCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: HKHLVFERAPSNTKRQHVEMRKF*YFNHWK
Trigger: CTTCCAGTGATTGAAGTACAAAAACTTCCTCATCTC...TACGTGTTGCCTCTTTGTGTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCGATAACAAGGAGACATaGAACTGGCTGAGCCTATTT +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSDNKET*NWLSLF
Trigger: AAATAGGCTCAGCCAGTTCAATGTCTCCTTGTTATC...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGAAGAATATCTATGCCTaGTTCTTGTGCATGAACAAC +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVKNIYA*FLCMNN
Trigger: GTTGTTCATGCACAAGAACAAGGCATAGATATTCTT...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp TTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCATAGTGTTTTCCAATATTTCCTaGATCTCCTACTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: FRQKQCTSGSISQYCSIVFSNIS*ISYFSL
Trigger: AAGGGAGAAGTAGGAGATCAAGGAAATATTGGAAAA...CACTATGGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATATCCTTGTATGCCTTTaGGCCCAAGTAGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDILVCL*AQVGLE
Trigger: TTCAAGGCCTACTTGGGCCAAAAGGCATACAAGGAT...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATAGCATTGATATCCATTaGCTTTCTTGGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDSIDIH*LSWAWC
Trigger: GCACCAGGCCCAAGAAAGCAAATGGATATCAATGCT...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS GCA 90 bp GATGGCTCATTTGTCACTCTATGCAAGCTTGTGTTTAAAATTGGTTaGATTTCCATGAGTTCGTTAGTGTGTAGATTTGCTGTGATAGCC +
Preference number: 5 (lower is better)
Translates to: DGSFVTLCKLVFKIG*ISMSSLVCRFAVIA
Trigger: GGCTATCACAGCAAATCTACACACTAACGAACTCATGGAAATGCAACCAATTTTAAACACAAGCTTGCATAGAGTGACAAATGAGCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 90 bp AATGAGGATGATGATGTGGATATTTTGGAAGTAGGACTATCATGCTaGTCTTTATTAGAGGTTCATGATTCCCTAGGAATGGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: NEDDDVDILEVGLSC*SLLEVHDSLGMEGS
Trigger: GGATCCTTCCATTCCTAGGGAATCATGAACCTCTAATAAAGAGCAGCATGATAGTCCTACTTCCAAAATATCCACATCATCATCCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS GCA 90 bp TGGAATGAGGATGATGATGTGGATATTTTGGAAGTAGGACTATCATaGTGCTCTTTATTAGAGGTTCATGATTCCCTAGGAATGGAAGGA +
Preference number: 5 (lower is better)
Translates to: WNEDDDVDILEVGLS*CSLLEVHDSLGMEG
Trigger: TCCTTCCATTCCTAGGGAATCATGAACCTCTAATAAAGAGCAGCATGATAGTCCTACTTCCAAAATATCCACATCATCATCCTCATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CAA 90 bp ACCCCCAATCTGTACCCCAAACCTACTACTAGATGTAGCTGGCCTATAATAATTAAGATAACTGAGATCTaGATATCTGGTGTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: TPNLYPKPTTRCSWPIIIKITEI*ISGVLV
Trigger: GACAAGAACACCAGATATCAAGATCTCAGTTATCTT...AATTATTATAGGCCAGCTACATCTAGTAGTAGGTTTGGGGTACAGATTGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCAAGATAACTGAGATCTaGATATCTGGTGTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSKITEI*ISGVLV
Trigger: GACAAGAACACCAGATATCAAGATCTCAGTTATCTT...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp GTAATTTTTAGACAGAAGCAGTGCACATCTGGAAGCATTAGCCAGTATTGCTCCTTTTCCAATATTTCCTaGATCTCCTACTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: VIFRQKQCTSGSISQYCSFSNIS*ISYFSL
Trigger: AAGGGAGAAGTAGGAGATCAAGGAAATATTGGAAAA...GGAGCAATACTGGCTAATGCTTCCAGATGTGCACTGCTTCTGTCTAAAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS-3UTR CAA 90 bp AACTCAGTAAATGAAGGAAGTTCATCTGGACTTTCCCAACTCCAAACTCCAACTGATGATGTGGATATTTaGGAAGTAGGACTATCATGC +
Preference number: 5 (lower is better)
Translates to: NSVNEGSSSGLSQLQTPTDDVDI*EVGLSC
Trigger: GCATGATAGTCCTACTTCCAAAATATCCACATCATC...AGTTGGAGTTTGGAGTTGGGAAAGTCCAGATGAACTTCCTTCATTTACTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS-3UTR CAA 90 bp CAAGGCTTGAATAGCAGCATTGATATCCATTTGCTTAGTTTCACCTCTAAAGCCAAGAATATCTATGCCTaGTTCTTGTGCATGAACAAC +
Preference number: 5 (lower is better)
Translates to: QGLNSSIDIHLLSFTSKAKNIYA*FLCMNN
Trigger: GTTGTTCATGCACAAGAACAAGGCATAGATATTCTT...GGCTTTAGAGGTGAAACTAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426639.5
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTCATGTTGTGTGATATaGTCAGACATGTTTAGGAGA +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNSCCVI*SDMFRR
Trigger: TCTCCTAAACATGTCTGACAATATCACACAACATGA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTCACTCTATGCAAGCTaGTGTTTAAAATTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNSLYAS*CLKLVA
Trigger: TGCAACCAATTTTAAACACAAGCTTGCATAGAGTGA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATTCACCCTTATCACCTTaGATTCCAGGTAGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDSPLSP*IPGSPL
Trigger: TAAAGGACTACCTGGAATCAAAGGTGATAAGGGTGA...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp AAGAAATCTAATTCTTTTGCGTACAAGCACAGGTTACAATGTGCTGGCTTTGATGTGCCAAGAGGATTCTaGATGCTGTGCAATAAATTG +
Preference number: 5 (lower is better)
Translates to: KKSNSFAYKHRLQCAGFDVPRGF*MLCNKL
Trigger: CAATTTATTGCACAGCATCAAGAATCCTCTTGGCAC...ATCAAAGCCAGCACATTGTAACCTGTGCTTGTACGCAAAAGAATTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS-3UTR CAA 90 bp GAAATAGTCTATGAAAGCCATAAGCACCTTGTTTTCGAAAGAGCACCAAGCAACTACAATGTGCTGGCTTaGATTCCAAATACACAAAGA +
Preference number: 5 (lower is better)
Translates to: EIVYESHKHLVFERAPSNYNVLA*IPNTQR
Trigger: TCTTTGTGTATTTGGAATCAAAGCCAGCACATTGTA...GTTGCTTGGTGCTCTTTCGAAAACAAGGTGCTTATGGCTTTCATAGACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS CCA 72 bp GCAGGAGCTGCAGGAGGGCCGCATGCGGAGGCTGGCTaGGCAAGAAGTGGAGGGCCTCACTCCGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AGAAGGPHAEAG*ARSGGPHSASP
Trigger: AGGAGAGGCGGAGTGAGGCCCTCCACTTCTTGCCCAGCCAGCCTCCGCATGCGGCCCTCCTGCAGCTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp AGGGGAGTGTTAGTCACCAGCGTGGGCCTCGCGCGGTaGCAGAGGGAAAGCCCTCGGGGCAGGAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RGVLVTSVGLAR*QRESPRGRSCR
Trigger: CCTGCAGCTCCTGCCCCGAGGGCTTTCCCTCTGCCACCGCGCGAGGCCCACGCTGGTGACTAACACTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 72 bp CCCGCCGCGAGTGCCACTTCCCCAGTGACAGGGCAATaGTCAGGGCGCAGCCTCGGCTCGGATGGGCAACGT +
Preference number: 6 (lower is better)
Translates to: PAASATSPVTGQ*SGRSLGSDGQR
Trigger: ACGTTGCCCATCCGAGCCGAGGCTGCGCCCTGATCATTGCCCTGTCACTGGGGAAGTGGCACTCGCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp CGGAGCCCAGCTCTGGAGCTTAGGGAGCCGCTGCCCTaGACCTCGGGACTCGCGCCAGCGAGCTTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RSPALELREPLP*TSGLAPASFSS
Trigger: AGAGGAAAAGCTCGCTGGCGCGAGTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp GGAGCTGGAGCCAGAGAGATCGTCGGAGCCCAGCTCTaGAGCTTAGGGAGCCGCTGCCCTGGACCTCGGGAC +
Preference number: 6 (lower is better)
Translates to: GAGAREIVGAQL*SLGSRCPGPRD
Trigger: GTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCGACGATCTCTCTGGCTCCAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp ATCGTCGGAGCCCAGCTCTGGAGCTTAGGGAGCCGCTaGCCTGGACCTCGGGACTCGCGCCAGCGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: IVGAQLWSLGSR*PGPRDSRQRAF
Trigger: AAAAGCTCGCTGGCGCGAGTCCCGAGGTCCAGGGCAGCGGCTCCCTAAGCTCCAGAGCTGGGCTCCGACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 72 bp CCTCTAGCGTCACAGCAATCGCCAGGCTGGACGCCCTaGGAAGCACCTCGGGGAAGCAGGACCTCGACAGGG +
Preference number: 6 (lower is better)
Translates to: PLASQQSPGWTP*EAPRGSRTSTG
Trigger: CCCTGTCGAGGTCCTGCTTCCCCGAGGTGCTTCTCAGGGCGTCCAGCCTGGCGATTGCTGTGACGCTAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp GCGCGCGAGCCCCAGCCAGGCTGGGCTGCACGCGGCTaGGAAGCACATGTTCATACAAACACGACCACAAGG +
Preference number: 6 (lower is better)
Translates to: AREPQPGWAARG*EAHVHTNTTTR
Trigger: CCTTGTGGTCGTGTTTGTATGAACATGTGCTTCCCAGCCGCGTGCAGCCCAGCCTGGCTGGGGCTCGCGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 72 bp ATGTGGCCCTGGTATGCCCCGTGGACCTCTCTTCCCTaGCGGACCTGGGATACCTGCTGGACCAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: MWPWYAPWTSLP*RTWDTCWTRWT
Trigger: GGTCCACCTGGTCCAGCAGGTATCCCAGGTCCGTCAGGGAAGAGAGGTCCACGGGGCATACCAGGGCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS TCA 72 bp TGCGTGAGCCGCTCTGAGAAGGCAACCCGCAGAGCTTaGCCTCTACTCGCTCCAGGGACTCCCCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CVSRSEKATRRA*PLLAPGTPQPP
Trigger: TGGAGGCTGGGGAGTCCCTGGAGCGAGTAGAGGTCAAGCTCTGCGGGTTGCCTTCTCAGAGCGGCTCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 72 bp TGCCTGGGAACCCCATGCGACCTGCGTGAGCCGCTCTaGGAAGGCAACCCGCAGAGCTTGACCTCTACTCGC +
Preference number: 6 (lower is better)
Translates to: CLGTPCDLREPL*EGNPQSLTSTR
Trigger: GCGAGTAGAGGTCAAGCTCTGCGGGTTGCCTTCTCAGAGCGGCTCACGCAGGTCGCATGGGGTTCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp CAGGGCGCAGCCTCGGCTCGGATGGGCAACGTTTGTTaGCCTTCTAACCAGAGGGGATTGCCTCTGAGCCCG +
Preference number: 6 (lower is better)
Translates to: QGAASARMGNVC*PSNQRGLPLSP
Trigger: CGGGCTCAGAGGCAATCCCCTCTGGTTAGAAGGCCAACAAACGTTGCCCATCCGAGCCGAGGCTGCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CAA 90 bp TCCACAGCCGCGTTCACCCTTCTCGCCCAGGGGCCAGAAGCAAACTaGTGTAACCCACTGACCTCTTCCAGGGGGACCAGGGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: STAAFTLLAQGPEAN*CNPLTSSRGTRASS
Trigger: GCTGGATGCCCTGGTCCCCCTGGAAGAGGTCAGTGGGTTACACAAGTTTGCTTCTGGCCCCTGGGCGAGAAGGGTGAACGCGGCTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS TCA 72 bp AGGCTGGCAGGGCTAGAGCCTCTCTGCATCCGCCCCTaGTCAGCGGGAAGATCTGTCAGTTCCGCAGGATCG +
Preference number: 6 (lower is better)
Translates to: RLAGLEPLCIRP*SAGRSVSSAGS
Trigger: CGATCCTGCGGAACTGACAGATCTTCCCGCTGATCAGGGGCGGATGCAGAGAGGCTCTAGCCCTGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp ATCAGCGGGAAGATCTGTCAGTTCCGCAGGATCGGCTaGAACCCCCGACTCTCCAGGCTGGTCCACACAGAG +
Preference number: 6 (lower is better)
Translates to: ISGKICQFRRIG*NPRLSRLVHTE
Trigger: CTCTGTGTGGACCAGCCTGGAGAGTCGGGGGTTGCAGCCGATCCTGCGGAACTGACAGATCTTCCCGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp ACAAACACGACCACAAGGCGCTCTTTCTCCGCACCCTaGCTCCGCCTGCCCTCAGCTGACACGGTCAATTCT +
Preference number: 6 (lower is better)
Translates to: TNTTTRRSFSAP*LRLPSADTVNS
Trigger: AGAATTGACCGTGTCAGCTGAGGGCAGGCGGAGGCAGGGTGCGGAGAAAGAGCGCCTTGTGGTCGTGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp GACAGGGCAATGATCAGGGCGCAGCCTCGGCTCGGATaGGCAACGTTTGTTGGCCTTCTAACCAGAGGGGAT +
Preference number: 6 (lower is better)
Translates to: DRAMIRAQPRLG*ATFVGLLTRGD
Trigger: ATCCCCTCTGGTTAGAAGGCCAACAAACGTTGCCCATCCGAGCCGAGGCTGCGCCCTGATCATTGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp TCCGCAGGATCGGCTGCAACCCCCGACTCTCCAGGCTaGTCCACACAGAGGGATGTTTATCGAGAACAGTGG +
Preference number: 6 (lower is better)
Translates to: SAGSAATPDSPG*STQRDVYREQW
Trigger: CCACTGTTCTCGATAAACATCCCTCTGTGTGGACCAGCCTGGAGAGTCGGGGGTTGCAGCCGATCCTGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp CAAAGCGCTAACGGAAAACAGAAGCCAACTCTGAACTaGTTAGGGTGCAGGTATGGGAGGCCTCGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: QSANGKQKPTLN*LGCRYGRPRGA
Trigger: GGCGCCCCGAGGCCTCCCATACCTGCACCCTAAGCAGTTCAGAGTTGGCTTCTGTTTTCCGTTAGCGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp AGGGATGTTTATCGAGAACAGTGGCGGGAAATCTTCTaGCTGGGAACCCCATGCGACCTGCGTGAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: RDVYREQWREIF*LGTPCDLREPL
Trigger: GAGCGGCTCACGCAGGTCGCATGGGGTTCCCAGGCAGAAGATTTCCCGCCACTGTTCTCGATAAACATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp TTGAGGAGATTGGGAGGTTTCCTCTTCACTGTTGCATaGGGATGGGGGTGTGCGGGGAGGTGCATGTGGTCA +
Preference number: 6 (lower is better)
Translates to: LRRLGGFLFTVA*GWGCAGRCMWS
Trigger: TGACCACATGCACCTCCCCGCACACCCCCATCCCCATGCAACAGTGAAGAGGAAACCTCCCAATCTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp ATGTTTATCGAGAACAGTGGCGGGAAATCTTCTGCCTaGGAACCCCATGCGACCTGCGTGAGCCGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: MFIENSGGKSSA*EPHATCVSRSE
Trigger: CTCAGAGCGGCTCACGCAGGTCGCATGGGGTTCCCAGGCAGAAGATTTCCCGCCACTGTTCTCGATAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CAA 90 bp CTTTCCACGGATCCCAGGAATGCCCCGTTCTCCTTCAGGTCCCAGTaGTCCCGCTTCTCCAGGAGAGCCAATAAAACCTTGTGCACCTTT +
Preference number: 6 (lower is better)
Translates to: LSTDPRNAPFSFRSQ*SRFSRRANKTLCTF
Trigger: AAAGGTGCACAAGGTTTTATTGGCTCTCCTGGAGAAGCGGGACAACTGGGACCTGAAGGAGAACGGGGCATTCCTGGGATCCGTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS TCA 72 bp CACGAGGCATCCTTTCAAACACGGTATTTTGCAAGCTaGGAAGACAAGGGGAAGATACCGCGGGTACTCGGC +
Preference number: 6 (lower is better)
Translates to: HEASFQTRYFAS*EDKGKIPRVLG
Trigger: GCCGAGTACCCGCGGTATCTTCCCCTTGTCTTCTCAGCTTGCAAAATACCGTGTTTGAAAGGATGCCTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp CTGCTGGCACGAGGCATCCTTTCAAACACGGTATTTTaGAAGCTGAGAAGACAAGGGGAAGATACCGCGGGT +
Preference number: 6 (lower is better)
Translates to: LLARGILSNTVF*KLRRQGEDTAG
Trigger: ACCCGCGGTATCTTCCCCTTGTCTTCTCAGCTTGCAAAATACCGTGTTTGAAAGGATGCCTCGTGCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CCA 72 bp AAAACCCAGGAGCAGATCTGCTTTAACTCCGGTGGTTaGTCACAACTACCAAGGGGAGTGTTAGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: KTQEQICFNSGG*SQLPRGVLVTS
Trigger: GCTGGTGACTAACACTCCCCTTGGTAGTTGTGACCAACCACCGGAGTTAAAGCAGATCTGCTCCTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp CCCAAATCATCTGGACCCAATTTACAAACCCCAAACTaGCCAAGAATTTATGCAGGGCCTTTTCTGGGAGCG +
Preference number: 6 (lower is better)
Translates to: PKSSGPNLQTPN*PRIYAGPFLGA
Trigger: CGCTCCCAGAAAAGGCCCTGCATAAATTCTTGGGCAGTTTGGGGTTTGTAAATTGGGTCCAGATGATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS GCA 72 bp CAAAGCGCTAACGGAAAACAGAAGCCAACTCTGAACTaGTTAGGGTGCAGGTATTCGGAAATCAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: QSANGKQKPTLN*LGCRYSEIKSV
Trigger: CACCGACTTGATTTCCGAATACCTGCACCCTAAGCAGTTCAGAGTTGGCTTCTGTTTTCCGTTAGCGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496682.2
CDS CCA 72 bp CCCAAGAATTTATGCAGGGCCTTTTCTGGGAGCGTCTaGAAGGGAAGTGTAAACCAGACAAGACAAAACCCA +
Preference number: 6 (lower is better)
Translates to: PKNLCRAFSGSV*KGSVNQTRQNP
Trigger: TGGGTTTTGTCTTGTCTGGTTTACACTTCCCTTCCAGACGCTCCCAGAAAAGGCCCTGCATAAATTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485434.1
CDS CAA 90 bp TTTCCACGCCTTGTTCTGTGGGCTCTTAAATGCATTTGTATGCATTaGTCCGTGCAGCAAAGCGCTAACGGAAAACAGAAGCCAACTCTG +
Preference number: 6 (lower is better)
Translates to: FPRLVLWALKCICMH*SVQQSANGKQKPTL
Trigger: CAGAGTTGGCTTCTGTTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS GCA 72 bp CACGCCTTGTTCTGTGGGCTCTTAAATGCATTTGTATaGATTTGTCCGTGCAGCAAAGCGCTAACGGAAAAC +
Preference number: 6 (lower is better)
Translates to: HALFCGLLNAFV*ICPCSKALTEN
Trigger: GTTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAGGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS GCA 72 bp GAGACTTTTCCACGCCTTGTTCTGTGGGCTCTTAAATaGATTTGTATGCATTTGTCCGTGCAGCAAAGCGCT +
Preference number: 6 (lower is better)
Translates to: ETFPRLVLWALK*ICMHLSVQQSA
Trigger: AGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAGGCGTGGAAAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS GCA 72 bp GTACAGCAGTCGCTGGTGATGAGTGTCTTACGTCTTTaGCTCCAAGGCCTAGTTGATGAAGAATATCTATGC +
Preference number: 6 (lower is better)
Translates to: VQQSLVMSVLRL*LQGLVDEEYLC
Trigger: GCATAGATATTCTTCATCAACTAGGCCTTGGAGGCAAAGACGTAAGACACTCATCACCAGCGACTGCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000496682.2
CDS CAA 90 bp GAGAGTTGTACAAGGAATGCTTGTTTCAGGTTGGTATTTGTCTGCTaGGCGACACTGCTGTTTCACATATCTGCAGTAGTCTGCAGATGC +
Preference number: 6 (lower is better)
Translates to: ESCTRNACFRLVFVC*ATLLFHISAVVCRC
Trigger: GCATCTGCAGACTACTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGTACAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 72 bp TGTGGGCTCTTAAATGCATTTGTATGCATTTGTCCGTaGAGCAAAGCGCTAACGGAAAACAGAAGCCAACTC +
Preference number: 6 (lower is better)
Translates to: CGLLNAFVCICP*SKALTENRSQL
Trigger: GAGTTGGCTTCTGTTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS TCA 72 bp TTAAAAATGACTCCTGATTCTGTTAAATGGACCCCCTaGGGTAACGGTGTAGATGCTGATGGTACAGCAGTC +
Preference number: 6 (lower is better)
Translates to: LKMTPDSVKWTP*GNGVDADGTAV
Trigger: GACTGCTGTACCATCAGCATCTACACCGTTACCTCAGGGGGTCCATTTAACAGAATCAGGAGTCATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CCA 72 bp ATGTATCCTCTGACAGTACTTTTTCAGCAAATAGTTTaGGCGGGGGAGAGTGTTCCGGTATCTTTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: MYPLTVLFQQIV*AGESVPVSLLV
Trigger: TACCAACAAAGATACCGGAACACTCTCCCCCGCCCAAACTATTTGCTGAAAAAGTACTGTCAGAGGATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 72 bp CTTGTTCTGTGGGCTCTTAAATGCATTTGTATGCATTaGTCCGTGCAGCAAAGCGCTAACGGAAAACAGAAG +
Preference number: 6 (lower is better)
Translates to: LVLWALKCICMH*SVQQSANGKQK
Trigger: CTTCTGTTTTCCGTTAGCGCTTTGCTGCACGGACAAATGCATACAAATGCATTTAAGAGCCCACAGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370571.7
ENST00000426639.5
ENST00000485434.1
ENST00000496682.2
CDS CAA 72 bp ACAAGGAATGCTTGTTTCAGGTTGGTATTTGTCTGCTaGGCGACACTGCTGTTTCACATATCTGCAGTAGTC +
Preference number: 6 (lower is better)
Translates to: TRNACFRLVFVC*ATLLFHISAVV
Trigger: GACTACTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 72 bp TGGTATGAGAGTTGTACAAGGAATGCTTGTTTCAGGTaGGTATTTGTCTGCTTGGCGACACTGCTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: WYESCTRNACFR*VFVCLATLLFH
Trigger: GTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGTACAACTCTCATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 72 bp AATGTATCCTCTGACAGTACTTTTTCAGCAAATAGTTaGGGCGGGGGAGAGTGTTCCGGTATCTTTGTTGGT +
Preference number: 6 (lower is better)
Translates to: NVSSDSTFSANS*GGGECSGIFVG
Trigger: ACCAACAAAGATACCGGAACACTCTCCCCCGCCCAAACTATTTGCTGAAAAAGTACTGTCAGAGGATACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 90 bp CCTTCAGTAAATGTATCCTCTGACAGTACTTTTTCAGCAAATAGTTaGGGCGGGGGAGAGTGTTCCGGTATCTTTGTTGGTATGAGAGTT +
Preference number: 6 (lower is better)
Translates to: PSVNVSSDSTFSANS*GGGECSGIFVGMRV
Trigger: AACTCTCATACCAACAAAGATACCGGAACACTCTCCCCCGCCCAAACTATTTGCTGAAAAAGTACTGTCAGAGGATACATTTACTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS TCA 72 bp ATTCATTTTTGCCTCACTGATGCGATGAGTGGTCACTaGCAGGCTGAAATTTGTCTGAGTATCTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: IHFCLTDAMSGH*QAEICLSIFLS
Trigger: ACTGAGGAAGATACTCAGACAAATTTCAGCCTGTCAGTGACCACTCATCGCATCAGTGAGGCAAAAATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 72 bp TGTACAAGGAATGCTTGTTTCAGGTTGGTATTTGTCTaGTTGGCGACACTGCTGTTTCACATATCTGCAGTA +
Preference number: 6 (lower is better)
Translates to: CTRNACFRLVFV*LATLLFHISAV
Trigger: TACTGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 72 bp CGATGTGACTGTAACCCAGTTAATATTGTAAACGGCTaGCCCAAGTTGACTGGTAAAATTTTCACGAAAGGT +
Preference number: 6 (lower is better)
Translates to: RCDCNPVNIVNG*PKLTGKIFTKG
Trigger: ACCTTTCGTGAAAATTTTACCAGTCAACTTGGGGCAGCCGTTTACAATATTAACTGGGTTACAGTCACATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 90 bp TATCTTTGTTGGTATGAGAGTTGTACAAGGAATGCTTGTTTCAGGTaGGTATTTGTCTGCTTGGCGACACTGCTGTTTCACATATCTGCA +
Preference number: 6 (lower is better)
Translates to: YLCWYESCTRNACFR*VFVCLATLLFHISA
Trigger: TGCAGATATGTGAAACAGCAGTGTCGCCAAGCAGACAAATACCAACCTGAAACAAGCATTCCTTGTACAACTCTCATACCAACAAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 90 bp TCCTATGCCAACTTCCACTGGAATGAGGATGATGATGTGGATATTTaGGAAGTAGGACTATCATGCTGCTCTTTATTAGAGGTTCATGAT +
Preference number: 6 (lower is better)
Translates to: SYANFHWNEDDDVDI*EVGLSCCSLLEVHD
Trigger: ATCATGAACCTCTAATAAAGAGCAGCATGATAGTCCTACTTCCAAAATATCCACATCATCATCCTCATTCCAGTGGAAGTTGGCATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS TCA 72 bp TCCATCTGTAGGGCAGTATTTGATTCAATCAAGGCTTaGATAGCAGCATTGATATCCATTTGCTTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: SICRAVFDSIKA*IAALISICFLG
Trigger: CCCAAGAAAGCAAATGGATATCAATGCTGCTATTCAAGCCTTGATTGAATCAAATACTGCCCTACAGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370571.7
CDS CAA 90 bp CCACAGCAGAGACATTTCCTGACTGAAGAGAAGATAACTGAGATCTaGATATCTGGTGTTCTTGTCTTTTATACACGGTTTCAGAATCAT +
Preference number: 6 (lower is better)
Translates to: PQQRHFLTEEKITEI*ISGVLVFYTRFQNH
Trigger: ATGATTCTGAAACCGTGTATAAAAGACAAGAACACCAGATATCAAGATCTCAGTTATCTTCTCTTCAGTCAGGAAATGTCTCTGCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 90 bp CACCTTCTTTCCTTAGATCAAGGTGATTATCCACAGATGGCTCATTaGTCACTCTATGCAAGCTTGTGTTTAAAATTGGTTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: HLLSLDQGDYPQMAH*SLYASLCLKLVAFP
Trigger: TGGAAATGCAACCAATTTTAAACACAAGCTTGCATAGAGTGACAAATGAGCCATCTGTGGATAATCACCTTGATCTAAGGAAAGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 72 bp GATGATGTGGATATTTTGGAAGTAGGACTATCATGCTaGTCTTTATTAGAGGTTCATGATTCCCTAGGAATG +
Preference number: 6 (lower is better)
Translates to: DDVDILEVGLSC*SLLEVHDSLGM
Trigger: CATTCCTAGGGAATCATGAACCTCTAATAAAGAGCAGCATGATAGTCCTACTTCCAAAATATCCACATCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS GCA 72 bp GATGATGATGTGGATATTTTGGAAGTAGGACTATCATaGTGCTCTTTATTAGAGGTTCATGATTCCCTAGGA +
Preference number: 6 (lower is better)
Translates to: DDDVDILEVGLS*CSLLEVHDSLG
Trigger: TCCTAGGGAATCATGAACCTCTAATAAAGAGCAGCATGATAGTCCTACTTCCAAAATATCCACATCATCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473734.1
CDS CAA 72 bp GACAGACCAGTTACTCTATCATCATGTTGTGTGATATaGTCAGACATGTTTAGGAGAGAGCTAAATTTCTCT +
Preference number: 6 (lower is better)
Translates to: DRPVTLSSCCVI*SDMFRRELNFS
Trigger: AGAGAAATTTAGCTCTCTCCTAAACATGTCTGACAATATCACACAACATGATGATAGAGTAACTGGTCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 72 bp TCCTTAGATCAAGGTGATTATCCACAGATGGCTCATTaGTCACTCTATGCAAGCTTGTGTTTAAAATTGGTT +
Preference number: 6 (lower is better)
Translates to: SLDQGDYPQMAH*SLYASLCLKLV
Trigger: AACCAATTTTAAACACAAGCTTGCATAGAGTGACAAATGAGCCATCTGTGGATAATCACCTTGATCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS CAA 90 bp TTAAACAGTGACAGACCAGTTACTCTATCATCATGTTGTGTGATATaGTCAGACATGTTTAGGAGAGAGCTAAATTTCTCTTTGGTATTC +
Preference number: 6 (lower is better)
Translates to: LNSDRPVTLSSCCVI*SDMFRRELNFSLVF
Trigger: GAATACCAAAGAGAAATTTAGCTCTCTCCTAAACATGTCTGACAATATCACACAACATGATGATAGAGTAACTGGTCTGTCACTGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS TCA 72 bp AATTTGTGGAAGAATAGATGGCATCTTCTTAAACAGTaGCAGACCAGTTACTCTATCATCATGTTGTGTGAT +
Preference number: 6 (lower is better)
Translates to: NLWKNRWHLLKQ*QTSYSIIMLCD
Trigger: ATCACACAACATGATGATAGAGTAACTGGTCTGTCACTGTTTAAGAAGATGCCATCTATTCTTCCACAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5
CDS GCA 72 bp TTTGTCACTCTATGCAAGCTTGTGTTTAAAATTGGTTaGATTTCCATGAGTTCGTTAGTGTGTAGATTTGCT +
Preference number: 6 (lower is better)
Translates to: FVTLCKLVFKIG*ISMSSLVCRFA
Trigger: AGCAAATCTACACACTAACGAACTCATGGAAATGCAACCAATTTTAAACACAAGCTTGCATAGAGTGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370571.7
ENST00000426639.5