RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL1A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108821

Ensembl transcript IDs: ENST00000225964.10, ENST00000463440.1, ENST00000471344.1, ENST00000474644.1, ENST00000476387.1, ENST00000485870.1, ENST00000486572.1, ENST00000494334.1, ENST00000495677.1, ENST00000504289.1, ENST00000507689.1, ENST00000510710.3, ENST00000511732.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTaGCACGCGTTCCCCAAATCCGATGTTTCTGCTTTGTCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: RNRTVSPAQPCGTRD*HAFPKSDVSALSWP
Trigger: GGGCCACGACAAAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR GCA 90 bp CTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTaGTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGG +
Preference number: 1 (lower is better)
Translates to: LRHKGLTRVPQIRCF*FVVALPDSPPNPVR
Trigger: CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR TCA 90 bp AGCGGGCTGAGGGTGGGGGCCACTTGGGTGTTTGAGCATTGCCTTTaGTTGCTGGGCAGACAATACATTGTTTCCTGTGTCTTCTGGGGA +
Preference number: 1 (lower is better)
Translates to: SGLRVGATWVFEHCL*LLGRQYIVSCVFWG
Trigger: TCCCCAGAAGACACAGGAAACAATGTATTGTCTGCCCAGCAATCAAAGGCAATGCTCAAACACCCAAGTGGCCCCCACCCTCAGCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTCCAGTGAGGGGCTGGTaGCTCCCCCGGCATGACCCC +
Preference number: 2 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLPVRGW*LPRHDP
Trigger: GGGGTCATGCCGGGGGAGCCACCAGCCCCTCACTGG...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR TCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGGGCCACTTGGGTGTTTaGGCATTGCCTTTGATTGCT +
Preference number: 2 (lower is better)
Translates to: MARLLWQSENPRSPRAWGGHLGV*ALPLIA
Trigger: AGCAATCAAAGGCAATGCTCAAACACCCAAGTGGCC...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR CAA 90 bp AAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATaGACACGCGTTCCCCAAATCCGATGTTTCTGCTTTGTCGTGGCC +
Preference number: 2 (lower is better)
Translates to: KEQNSLSRPALRHKG*TRVPQIRCFCFVVA
Trigger: GGCCACGACAAAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR TCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGCTTCTTTGGCAGTCTaGGAACCCCAGGTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLASLAV*EPQVPQ
Trigger: CTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR TCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTTGTCGTGGCCCTTCCTaGCTCTCCTCCGAACCCAGT +
Preference number: 2 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLCRGPS*LSSEPS
Trigger: ACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACA...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCATGGGAGCGCCAGATaGCAAGGCTTCTTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGHGSAR*QGFFGS
Trigger: ACTGCCAAAGAAGCCTTGCCATCTGGCGCTCCCATG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGGGAAAGTTGGTTGGGTaGGAGGGAGCCAGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: LKNEGEMLQEPWERQMARGKLVG*EGARLG
Trigger: TCCCAACCTGGCTCCCTCCCACCCAACCAACTTTCC...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGGACTTACCCCCGCATaGGTCTTCAAGCAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIGLTPA*VFKQVD
Trigger: GTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTAGGGTGGGGGCCACTTaGGTGTTTGAGCATTGCCTT +
Preference number: 2 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIRVGAT*VFEHCL
Trigger: AAGGCAATGCTCAAACACCCAAGTGGCCCCCACCCT...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTATGGCAAGGCTTCTTTaGCAGTCTGAGAACCCCAGG +
Preference number: 2 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIMARLL*QSENPR
Trigger: CCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR GCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGGGTTCAGTTTGGGTTaGTTGTCTGTTTCCGGGTTG +
Preference number: 2 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIGFSLG*LSVSGL
Trigger: CAACCCGGAAACAGACAAGCAACCCAAACTGAACCC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTCAGAAAGGGCAGCATTaGGGTTTCATAAGCCCAACG +
Preference number: 2 (lower is better)
Translates to: KNEGEMLQEPWERQMARLQKGQH*GFISPT
Trigger: CGTTGGGCTTATGAAACCCCAATGCTGCCCTTTCTG...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR GCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTAGCATTGCCTTTGATTaGTGGGCAGACAATACATTG +
Preference number: 2 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGISIAFD*WADNTL
Trigger: CAATGTATTGTCTGCCCAGCAATCAAAGGCAATGCT...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCTGCACTTTTGGTTTTTaGTCATGTTCGGTTGGTCAA +
Preference number: 2 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGCTFGF*SCSVGQ
Trigger: TTGACCAACCGAACATGACCAAAAACCAAAAGTGCA...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR GCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGTTTGGTAAGGTTGAATaGACTTTTGGTTTTTGGTCA +
Preference number: 2 (lower is better)
Translates to: LKNEGEMLQEPWERQMARFGKVE*TFGFWS
Trigger: TGACCAAAAACCAAAAGTGCATTCAACCTTACCAAA...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR CCA 72 bp CAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTCTTTaGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QEPWERQMARLL*QSENPRSPRAW
Trigger: CCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCATCTGGCGCTCCCATGGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR TCA 72 bp ACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTaGCACGCGTTCCCCAAATCCGATGTTTCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: TVSPAQPCGTRD*HAFPKSDVSAL
Trigger: CAAAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR CCA 72 bp AAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATaGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGT +
Preference number: 3 (lower is better)
Translates to: KGRCCKSHGSAR*QGFFGSLRTPG
Trigger: ACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTTTCAGTTTGGGTTGCTaGTCTGTTTCCGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGFSLGC*SVSGLG
Trigger: CCCCAACCCGGAAACAGACAAGCAACCCAAACTGAA...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGGGGGTTCAGTTTGGGTaGCTTGTCTGTTTCCGGGTT +
Preference number: 3 (lower is better)
Translates to: LKNEGEMLQEPWERQMARGVQFG*LVCFRV
Trigger: AACCCGGAAACAGACAAGCAACCCAAACTGAACCCC...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGTGGGCAGACAATACATaGTTTCCTGTGTCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRWADNT*FPVSSG
Trigger: CCCAGAAGACACAGGAAACAATGTATTGTCTGCCCA...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTTTGAGGGGGTTCAGTTaGGGTTGCTTGTCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: KNEGEMLQEPWERQMARLLRGFS*GCLSVS
Trigger: GGAAACAGACAAGCAACCCAAACTGAACCCCCTCAA...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTAGGTTGAATGCACTTTaGGTTTTTGGTCATGTTCGG +
Preference number: 3 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGRLNAL*VFGHVR
Trigger: CCGAACATGACCAAAAACCAAAAGTGCATTCAACCT...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR TCA 72 bp AGGGTGGGGGCCACTTGGGTGTTTGAGCATTGCCTTTaGTTGCTGGGCAGACAATACATTGTTTCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: RVGATWVFEHCL*LLGRQYIVSCV
Trigger: GACACAGGAAACAATGTATTGTCTGCCCAGCAATCAAAGGCAATGCTCAAACACCCAAGTGGCCCCCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR-3UTR CAA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTATGCACTTTTGGTTTTaGGTCATGTTCGGTTGGTCA +
Preference number: 3 (lower is better)
Translates to: KNEGEMLQEPWERQMARLMHFWF*VMFGWS
Trigger: TGACCAACCGAACATGACCAAAAACCAAAAGTGCAT...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGAGGCCAGGGGCGCCCTaGCTACCGGGAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGRPGAP*LPGAPG
Trigger: CCCTGGAGCTCCCGGTAGCCAGGGCGCCCCTGGCCT...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGACCTCTCTCGCCTCTTaGTCCAGAGGGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGTSLAS*SRGARG
Trigger: GCCCCTGGCCCCTCTGGAGCAAGAGGCGAGAGAGGT...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGCACCAGGTGGGCCTaGGGGTCCGGGGCGACCATC +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGTRWA*GSGATI
Trigger: GATGGTCGCCCCGGACCCCCAGGCCCACCTGGTGCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCACCACGGTCACCCTTaGCGCCAGGAGAACCGTCTC +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGHHGHP*RQENRL
Trigger: GAGACGGTTCTCCTGGCGCCAAGGGTGACCGTGGTG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCGCAGGAAGGTCAGCTaGATGGCCACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGRRKVS*MATSAG
Trigger: CCCTGCCGATGTGGCCATCCAGCTGACCTTCCTGCG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCCAGTGAGGGGCTGGTaGCTCCCCCGGCATGACCCC +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGPVRGW*LPRHDP
Trigger: GGGGTCATGCCGGGGGAGCCACCAGCCCCTCACTGG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGTGTCGTGGCCCTTCCTaGCTCTCCTCCGAACCCAGT +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGCRGPS*LSSEPS
Trigger: ACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACA...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTGCGGGCGGGGTTCTTaGGGCTGCCCTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGICGRGS*GCPLGS
Trigger: GGAGCCCAGAGGGCAGCCGCAAGAACCCCGCCCGCA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGCCAGTGTCTCCCTTaGGTCCCTCGACGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGQCLP*VPRRRW
Trigger: CCACCGGCGTCGAGGGACCCAAGGGAGACACTGGCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGCCTGCGGGTCCCCTTaGGCCTCGGGGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLACGSP*ASGASV
Trigger: GACACTGGCCCCCGAGGCCCAAGGGGACCCGCAGGC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCACCGCTGTTACCCTTaGGACCAGGAGGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGHRCYP*DQEGRR
Trigger: CCGGCGGCCCTCCTGGTCCCAAGGGTAACAGCGGTG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGTGCCGGGAGCACCGTTaGCCCCTCGGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRCREHR*PLGDQQ
Trigger: CTGCTGGTCCCCGAGGGGCCAACGGTGCTCCCGGCA...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTGGGCCAGGGGGACCCTaGAGGCCAGAGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGGPGGP*RPEKPR
Trigger: CCGTGGCTTCTCTGGCCTCCAGGGTCCCCCTGGCCC...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAGCAGCGGGCTGGGCTaGAGCCGCACACGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGSSGLG*SRTRSP
Trigger: AGGAGAGCGTGTGCGGCTCCAGCCCAGCCCGCTGCT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGGACCCATGGGACCTaGAGCTCCAGGCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGTHGT*SSRLAR
Trigger: CCTGGCGAGCCTGGAGCTTCAGGTCCCATGGGTCCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCCCATCACACCAGCCTaGCCACGGGCACCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRPITPA*PRAPGG
Trigger: CCCACCTGGTGCCCGTGGTCAGGCTGGTGTGATGGG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTCACCAGGCATTCCCTaGAGGCCAGGGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGISPGIP*RPGAPW
Trigger: CCAGGGCGCCCCTGGCCTTCAGGGAATGCCTGGTGA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTCCTCCGAACCCAGTaGGGGGCTGGTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARLLRTQ*GAGGSP
Trigger: GGGGGAGCCACCAGCCCCTCACTGGGTTCGGAGGAG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCCTTCCTCTTGGCCGTaGGTCAGGAGGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRPSSWP*VRRAVA
Trigger: GGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTCAGGGGGACCAGCGCTaGCGCGAGCACCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIQGDQR*REHLWL
Trigger: GAGCCAAAGGTGCTCGCGGCAGCGCTGGTCCCCCTG...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCGGGGTTCTTGCGGCTaGCCTCTGGGCTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGRGSCG*PLGSGC
Trigger: ACATCCGGAGCCCAGAGGGCAGCCGCAAGAACCCCG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTGCGTCCGCTCATGCGTaGCCTCACACTCCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGASAHA*PHTPRA
Trigger: GGCACGCGGAGTGTGAGGCCACGCATGAGCGGACGC...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGACCAGGGAGACCCTaGAATCCGGGGGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGPGRP*NPGEPA
Trigger: TGCTGGCTCCCCCGGATTCCAGGGTCTCCCTGGTCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGTCGAAGCCGAATTCCTaGTCTGGGGCACCAACGTCC +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGSKPNS*SGAPTS
Trigger: GGACGTTGGTGCCCCAGACCAGGAATTCGGCTTCGA...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTAATCCTCGAGCACCCTaGGGCCCAGGAGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLNPRAP*GPGGPR
Trigger: GCGTGGGCCTCCTGGGCCTCAGGGTGCTCGAGGATT...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGGGCCAGGGGGTCCTTaGACACCAACAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLGPGGP*TPTGPG
Trigger: GCCTGGCCCTGTTGGTGTTCAAGGACCCCCTGGCCC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCAGAGTGGCACATCTTaGGGTCACGGCAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGQSGTS*GHGRCG
Trigger: CCCGCACCTGCCGTGACCTCAAGATGTGCCACTCTG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAATGGGCCACACTGGGCTaGGTGGGGTACACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQWATLG*VGYTQV
Trigger: GACCTGCGTGTACCCCACTCAGCCCAGTGTGGCCCA...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGAGGCAGTTGCCCCGGTaGCACATCAAGACAAGAACG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGRQLPR*HIKTRT
Trigger: CGTTCTTGTCTTGATGTGTCACCGGGGCAACTGCCT...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCGGAGAGCAGAGGCCTaGGAAGCCAGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGRRAEA*EARGRW
Trigger: CCACCTGCCTCTGGCTTCTCAGGCCTCTGCTCTCCG...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTGCCTCACACTCCGCGTaGCTCCTGCTCCGACCCCGA +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPASHSA*LLLRPR
Trigger: TCGGGGTCGGAGCAGGAGGCACGCGGAGTGTGAGGC...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCACCAGTGTCTCCTTTaGTGCCAGGAGCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGHQCLL*CQEHQV
Trigger: AACCTGGTGCTCCTGGCAGCAAAGGAGACACTGGTG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGGACCAGGGGGACCTTaGACACCACGCTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLGPGGP*TPRSPG
Trigger: CCCTGGCGAGCGTGGTGTGCAAGGTCCCCCTGGTCC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCGGATGTTCTCGATCTaGTGGCTCAGGCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGRMFSI*WLRLLR
Trigger: CCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCATGTAGACTCTTTGTaGCTGGGGAGGGGGTTAGCG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGHVDSL*LGRGLA
Trigger: CGCTAACCCCCTCCCCAGCCACAAAGAGTCTACATG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACTTGGCCTTCCTCTTaGCCGTGCGTCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGTWPSS*PCVRRA
Trigger: CGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGACCTCGGGGACCCATaGGACCTGAAGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGDLGDP*DLKLQA
Trigger: AGCCTGGAGCTTCAGGTCCCATGGGTCCCCGAGGTC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGAGCCTCGGGGCCCTTaGGGACCAGCTTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGEPRGP*GPASPL
Trigger: TAAGGGTGAAGCTGGTCCCCAAGGGCCCCGAGGCTC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGTCCGGGCAGGCCAGTaGGTCCGGGTTCACCTCGAG +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGVRAGQ*VRVHLE
Trigger: CTCGAGGTGAACCCGGACCCACTGGCCTGCCCGGAC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGTTCCAGTCAGACCCTTaGCACCAGGCAGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGFQSDP*HQADQL
Trigger: AAGCTGGTCTGCCTGGTGCCAAGGGTCTGACTGGAA...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCACCACGAGCTCCAGTaGGACCAGCAGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPHHELQ*DQQGRW
Trigger: CCAGCGGCCCTGCTGGTCCCACTGGAGCTCGTGGTG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCATGGGAGCGCCAGATaGCAAGGCTTCTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGHGSAR*QGFFGS
Trigger: ACTGCCAAAGAAGCCTTGCCATCTGGCGCTCCCATG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGCTGGCTCAGGCTCTTaGGGGTGGTGTCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRAGSGS*GWCPPR
Trigger: TCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGAGGGGGCCACATCGATaGTGGGCAGGCGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARRGPHR*WAGGRS
Trigger: AGACCTCCCGCCTGCCCATCATCGATGTGGCCCCCT...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTCTCGCTCTCCAGCCTTaGCGGGCTCTCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLLALQP*RALQQH
Trigger: GTGCTGCTGGAGAGCCCGGCAAGGCTGGAGAGCGAG...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGACCAGCATCACCAGTaGGACCGCGAGGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGDQHHQ*DREDQG
Trigger: CCCCTGGTCCTCGCGGTCGCACTGGTGATGCTGGTC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGTCCCTCGACGCCGGTaGTTTCTTGGTCGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRVPRRR*FLGRWV
Trigger: CACCCACCGACCAAGAAACCACCGGCGTCGAGGGAC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGTCACCACGCACACCCTaGGGACCTTCAGAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRSPRTP*GPSEPR
Trigger: CCGAGGCTCTGAAGGTCCCCAGGGTGTGCGTGGTGA...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCACCAGCGGGACCCTTaGGACCAGCAACACCATCTG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGHQRDP*DQQHHL
Trigger: CAGATGGTGTTGCTGGTCCCAAGGGTCCCGCTGGTG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTAGTCGAAACCAGCGCTaGGAGGACCAGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGSRNQR*EDQGDQ
Trigger: CTGGTCCCCCTGGTCCTCCCAGCGCTGGTTTCGACT...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCCGCCATACTCGAACTaGAATCCATCGGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGPPYSN*NPSVML
Trigger: GAGCATGACCGATGGATTCCAGTTCGAGTATGGCGG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCAACCCAGTGAGGGGCTaGTGGCTCCCCCGGCATGAC +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGNPVRG*WLPRHD
Trigger: GTCATGCCGGGGGAGCCACCAGCCCCTCACTGGGTT...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCCTCTCTCTCCTCTCTaGCCAGGCAGGCCGACCACA +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGPLSPL*PGRPTT
Trigger: TGTGGTCGGCCTGCCTGGTCAGAGAGGAGAGAGAGG...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTCCCCAGGCTCCGGTGTaGCTCGTGCAGCCATCGACA +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLPQAPV*LVQPST
Trigger: TGTCGATGGCTGCACGAGTCACACCGGAGCCTGGGG...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGCTTCTTTGGCAGTCTaGGAACCCCAGGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIASLAV*EPQVPQ
Trigger: CTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGTTAGCGTCCGCTCATaGGTGGCCTCACACTCCGCG +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGVSVRS*VASHSA
Trigger: CGCGGAGTGTGAGGCCACGCATGAGCGGACGCTAAC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCACCACGGGGACCTTTaGCGCCTTCTTTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRHHGDL*RLLCQQ
Trigger: CTGCTGGCAAAGAAGGCGGCAAAGGTCCCCGTGGTG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCACGATCACCACTCTTaGCAGCAGGGCCAACGGGGC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPHDHHS*QQGQRG
Trigger: GCCCCGTTGGCCCTGCTGGCAAGAGTGGTGATCGTG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCCGCCCCCAGGCAGTTaGCCCGGTGACACATCAAGA +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGPPPGS*PGDTSR
Trigger: TCTTGATGTGTCACCGGGGCAACTGCCTGGGGGCGG...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTGCCGGGAGGATGGGCTaGAGCTGTGGAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPAGRMG*SCGGGF
Trigger: AAACCCTCCTCCACAGCTGCAGCCCATCCTCCCGGC...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTGCGTCAGGAGGGCGGTaGCCGCTAAGAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLASGGR*PLRGAG
Trigger: TCCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGC...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGACCAGAGGGACCCATaGGGCCAGGCACGGAAATTC +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQDQRDP*GQARKF
Trigger: GAATTTCCGTGCCTGGCCCCATGGGTCCCTCTGGTC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGTCACCCTTAGGCCCTaGAAGACCAGCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRVTLRP*KTSCTT
Trigger: CGTGGTGCAGCTGGTCTTCCAGGGCCTAAGGGTGAC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGACCAGCAGGGCCGCTaGGACCACTTTCACCCTTGT +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRDQQGR*DHFHPC
Trigger: ACAAGGGTGAAAGTGGTCCCAGCGGCCCTGCTGGTC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTCACCAACATTACCAATaGGGCCAGGGGGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIHQHYQ*GQGVQR
Trigger: CCGCTGGACCCCCTGGCCCCATTGGTAATGTTGGTG...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTGCAGGGTCGGAGCCCTaGCCGCCATACTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLAGSEP*PPYSNW
Trigger: CCAGTTCGAGTATGGCGGCCAGGGCTCCGACCCTGC...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGGAAGGTCAGCTGGATaGCCACATCGGCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGGRSAG*PHRQGR
Trigger: CCGACCCTGCCGATGTGGCCATCCAGCTGACCTTCC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTCTGGGAGGCCTCGGTaGACATCAGGCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGSGRPR*TSGAGR
Trigger: CCTTCCTGCGCCTGATGTCCACCGAGGCCTCCCAGA...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGAAAGTTGGTTGGGTaGGAGGGAGCCAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGKLVG*EGARLG
Trigger: TCCCAACCTGGCTCCCTCCCACCCAACCAACTTTCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCTCGGTCATGGTACCTaGGGCCGTTCTGTACGCAGG +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPLGHGT*GRSVRR
Trigger: CCTGCGTACAGAACGGCCTCAGGTACCATGACCGAG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCACGGGGGCCCATCTaGCCAGGAGCTCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARPRGPI*PGAPFS
Trigger: TGAAAATGGAGCTCCTGGTCAGATGGGCCCCCGTGG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTGTCCAGCAATACCTTaGGGCCCGGGAGTACCAGGA +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGICPAIP*GPGVPG
Trigger: TCCTGGTACTCCCGGGCCTCAAGGTATTGCTGGACA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTGCTGGGGCAGGAAGCTaGAGTCGAAACCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLAGAGS*SRNQRW
Trigger: CCAGCGCTGGTTTCGACTTCAGCTTCCTGCCCCAGC...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTGCGGCACAAGGGATTaGCACGCGTTCCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGICGTRD*HAFPKS
Trigger: GGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTACTCCGCGTGCCTCCTaGTCCGACCCCGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLTPRAS*SDPEEK
Trigger: TTTCTCCTCGGGGTCGGAGCAGGAGGCACGCGGAGT...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCATCAGGACCAGGGCTaGCAGGGCTTCCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPHQDQG*QGFQSD
Trigger: GTCTGACTGGAAGCCCTGGCAGCCCTGGTCCTGATG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCAGCCTCTCCATCTTTaGCAGCAGGACCGACAGCGC +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARQPLHL*QQDRQR
Trigger: GCGCTGTCGGTCCTGCTGGCAAAGATGGAGAGGCTG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCTTTGCCGCCTTCTTTaGCAGCAGGACCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPLCRLL*QQDQEG
Trigger: GCCCTCCTGGTCCTGCTGGCAAAGAAGGCGGCAAAG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCACGGTGACCCTTTATaGCTCTGTCGCCCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRHGDPL*LCRPVR
Trigger: GCGAACAGGGCGACAGAGGCATAAAGGGTCACCGTG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTCGCCGGGGCAGTTCTTaGTCTCGTCACAGATCACGT +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIRRGSS*SRHRSR
Trigger: ACGTGATCTGTGACGAGACCAAGAACTGCCCCGGCG...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTGGTTTCTTGGTCGGTaGGTGACTCTGAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIWFLGR*VTLSRR
Trigger: CCGACGGCTCAGAGTCACCCACCGACCAAGAAACCA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAACGCCGGTGGTTTCTTaGTCGGTGGGTGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQTPVVS*SVGDSE
Trigger: CTCAGAGTCACCCACCGACCAAGAAACCACCGGCGT...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTGGACCTTGGAAGCCTTaGGGACCAGGTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLGPWKP*GPGAPG
Trigger: CCCTGGTGCACCTGGTCCCCAAGGCTTCCAAGGTCC...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTTCACCAGGGGGACCTTaGAAGCCTTGGGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLSPGGP*KPWGPG
Trigger: ACCTGGTCCCCAAGGCTTCCAAGGTCCCCCTGGTGA...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAATGCCGCGAGCACCTTTaGCTCCAGGAGCACCAACAT +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQCREHL*LQEHQH
Trigger: ATGTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCA...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCTTGCGGCTGCCCTCTaGGCTCCGGATGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGLAAAL*APDVLD
Trigger: ATCGAGAACATCCGGAGCCCAGAGGGCAGCCGCAAG...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCACACTGGGCTGAGTaGGGTACACGCAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARPHWAE*GTRRSH
Trigger: GTGAGACCTGCGTGTACCCCACTCAGCCCAGTGTGG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTCTTCTGGGCCACACTaGGCTGAGTGGGGTACACGC +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGSSGPH*AEWGTR
Trigger: GCGTGTACCCCACTCAGCCCAGTGTGGCCCAGAAGA...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCATCGCACAACACCTTaGCGTTGTCGCAGACGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGHRTTP*RCRRRR
Trigger: TCTGCGTCTGCGACAACGGCAAGGTGTTGTGCGATG...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACCTGTTCACCAGGTTTaGCTGCTTCACCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQPVHQV*LLHLED
Trigger: GTCCTCCAGGTGAAGCAGGCAAACCTGGTGAACAGG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCAGAGGGACCTTGTTTaGCAGGTTCACCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPQRDLV*QVHQRG
Trigger: GCCCCTCTGGTGAACCTGGCAAACAAGGTCCCTCTG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTCGCCGAACCAGACATaGCTCTTGTCCTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGISPNQT*LLSLGF
Trigger: GAACCCCAAGGACAAGAGGCATGTCTGGTTCGGCGA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTACGAAGGGGAGATGTTaGAAGAGCCATGGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPTKGRC*KSHGSA
Trigger: GGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGT...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTAGGGTGGGGGCCACTTaGGTGTTTGAGCATTGCCTT +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGRVGAT*VFEHCL
Trigger: AAGGCAATGCTCAAACACCCAAGTGGCCCCCACCCT...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
3UTR CAA 72 bp AACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATaGACACGCGTTCCCCAAATCCGATGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NSLSRPALRHKG*TRVPQIRCFCF
Trigger: AAAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACGTTCTGTACGCAGGTaGTTGGTGGGATGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQRSVRR*LVGCLR
Trigger: ACGAAGACATCCCACCAATCACCTGCGTACAGAACG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCCTTGGGGTTCTTGCTaGTGTACCAGTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGPWGSC*CTSSSG
Trigger: CCCAGAAGAACTGGTACATCAGCAAGAACCCCAAGG...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCAGTGTCTCCTTTGCTaGCAGGAGCACCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPQCLLC*QEHQVH
Trigger: GTGAACCTGGTGCTCCTGGCAGCAAAGGAGACACTG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGGGAAAAACTGCTTTGTaGTTTGGGAAGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGGKTAL*FGKLSL
Trigger: CAGAGACAACTTCCCAAAGCACAAAGCAGTTTTTCC...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCACACGTCTCGGTCATaGTACCTGAGGCCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGHTSRS*YLRPFC
Trigger: ACAGAACGGCCTCAGGTACCATGACCGAGACGTGTG...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGATGTTCTCGATCTGCTaGCTCAGGCTCTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRMFSIC*LRLLRV
Trigger: CACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACAT...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGGGACTTACCCCCGCATaGGTCTTCAAGCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARGLTPA*VFKQVD
Trigger: GTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCC...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTATGGCAAGGCTTCTTTaGCAGTCTGAGAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGMARLL*QSENPR
Trigger: CCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGATGTTGCAAGAGCCATaGGAGCGCCAGATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARMLQEP*ERQMAR
Trigger: CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACAT...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGGAGGTCCACAAAGCTaGACATGTCTAGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIGGPQS*TCLDPR
Trigger: TCTAGGGTCTAGACATGTTCAGCTTTGTGGACCTCC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACACCATCCAAACCACTaGAACCTCTGTGTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQHHPNH*NLCVPS
Trigger: TGAAGGGACACAGAGGTTTCAGTGGTTTGGATGGTG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGACCACGTTCACCACTTaGTCCAGAGGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRTTFTT*SRGTLF
Trigger: AAACAAGGTCCCTCTGGAGCAAGTGGTGAACGTGGT...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGGAATCCATCGGTCATaGTCTCGCCGAACCAGACAT +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGGIHRS*SRRTRH
Trigger: ATGTCTGGTTCGGCGAGAGCATGACCGATGGATTCC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTATTCAATCACTGTCTTaGCCCAGGCTCCGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPIQSLS*PRLRCD
Trigger: GTCACACCGGAGCCTGGGGCAAGACAGTGATTGAAT...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGGTTCAGTTTGGGTTaGTTGTCTGTTTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGFSLG*LSVSGL
Trigger: CAACCCGGAAACAGACAAGCAACCCAAACTGAACCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTTACGCAGGTGATTGGTaGGATGTCTTCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLYAGDW*DVFVLA
Trigger: GGCCAAGACGAAGACATCCCACCAATCACCTGCGTA...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACTGTACGCAGGTGATTaGTGGGATGTCTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQLYAGD*WDVFVL
Trigger: CAAGACGAAGACATCCCACCAATCACCTGCGTACAG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGGTCACGAACCACATTaGCATCATCAGCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLGHEPH*HHQPGS
Trigger: ACTACCGGGCTGATGATGCCAATGTGGTTCGTGACC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTCTTCCAGTCAGAGTaGCACATCTTGAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARLFQSE*HILRSR
Trigger: CCGTGACCTCAAGATGTGCCACTCTGACTGGAAGAG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGTGCACTTTTGGTTTTTaGTCATGTTCGGTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: MARLLWQSENPRSPRAWGCTFGF*SCSVGQ
Trigger: TTGACCAACCGAACATGACCAAAAACCAAAAGTGCA...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGTTTCTGCTTTGTCGTaGCCCTTCCTGACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGVSALS*PFLTLL
Trigger: GAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAAC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTTGTTGCAGAAGACTTTaGTGGCATCCAGGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLCCRRL*WHPGCS
Trigger: GCTGCAACCTGGATGCCATCAAAGTCTTCTGCAACA...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTAGGTACAGAGTCTTTTaGTTCCTCCCACCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLRYRVF*FLPPLG
Trigger: CCCTAGGGGTGGGAGGAAGCAAAAGACTCTGTACCT...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGCGGGAGGTCTTGGTaGTTTTGTATTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGGRSW*FCIQSL
Trigger: CAGTGATTGAATACAAAACCACCAAGACCTCCCGCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CCA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGACCTTTGGTATAAAATaGGGAGCCGCTTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LKNEGEMLQEPWERQMARTFGIK*GAASTL
Trigger: CAGGGTGGAAGCGGCTCCCCATTTTATACCAAAGGT...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTTTGAGCATTGCCTTTaGTTGCTGGGCAGACAATAC +
Preference number: 4 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIFEHCL*LLGRQY
Trigger: GTATTGTCTGCCCAGCAATCAAAGGCAATGCTCAAA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAGCATTGCCTTTGATTaGTGGGCAGACAATACATTG +
Preference number: 4 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGSIAFD*WADNTL
Trigger: CAATGTATTGTCTGCCCAGCAATCAAAGGCAATGCT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTCAAATCCGATGTTTCTaGTTTGTCGTGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLQIRCF*FVVALP
Trigger: AGGAAGGGCCACGACAAAGCAGAAACATCGGATTTG...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR TCA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTGGAAATTCCTCCGGTTaGTTTCTCATCATAGCCATA +
Preference number: 4 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGGNSSG*FLIIAI
Trigger: TATGGCTATGATGAGAAATCAACCGGAGGAATTTCC...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCCTAGGGGGAAAAACTaGTTTGTGCTTTGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPPRGKN*FVLWEV
Trigger: AACTTCCCAAAGCACAAAGCAGTTTTTCCCCCTAGG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR GCA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTTTTGGTAAGGTTGAATaGACTTTTGGTTTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KNEGEMLQEPWERQMARLFGKVE*TFGFWS
Trigger: TGACCAAAAACCAAAAGTGCATTCAACCTTACCAAA...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS GCA 90 bp GGGATGTCTTCGTCTTGGCCCTCGACTTGGCCTTCCTCTTGGCCGTaGGTCAGGAGGGCGGTGGCCGCTAAGAGGAGCAGGAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GMSSSWPSTWPSSWP*VRRAVAAKRSRSRR
Trigger: CCTCCGGCTCCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 90 bp CGCAGGAAGGTCAGCTGGATGGCCACATCGGCAGGGTCGGAGCCCTaGCCGCCATACTCGAACTGCAGGGGAGGGGAGAGAGGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: RRKVSWMATSAGSEP*PPYSNCRGGERGKS
Trigger: ACTCTTCCCTCTCTCCCCTCCCCTGCAGTTCGAGTATGGCGGCCAGGGCTCCGACCCTGCCGATGTGGCCATCCAGCTGACCTTCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510710.3
CDS-3UTR CAA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGGCCTGCGGGTCCCCTaGGGCCTCGGGGGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIGLRVP*GLGGQC
Trigger: ACACTGGCCCCCGAGGCCCAAGGGGACCCGCAGGCC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGTCCGGGGCGACCATCTaGACCGGCGGGACCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRSGATI*TGGTRG
Trigger: CCCCCTGGTCCCGCCGGTCAAGATGGTCGCCCCGGA...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 90 bp ATTGGTGGGATGTCTTCGTCTTGGCCCTCGACTTGGCCTTCCTCTTaGCCGTGCGTCAGGAGGGCGGTGGCCGCTAAGAGGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: IGGMSSSWPSTWPSS*PCVRRAVAAKRSRS
Trigger: GCTCCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 90 bp CGGGACAGCACTCGCCCTCGGGGACTTCGGCGCCGGGGCAGTTCTTaGTCTCGTCACAGATCACGTCATCGCACAACACCTTGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: RDSTRPRGLRRRGSS*SRHRSRHRTTPCRC
Trigger: ACAACGGCAAGGTGTTGTGCGATGACGTGATCTGTGACGAGACCAAGAACTGCCCCGGCGCCGAAGTCCCCGAGGGCGAGTGCTGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225964.10
ENST00000474644.1
ENST00000507689.1
CDS CCA 90 bp TCCCAACTCCCAGGGAAACCTCCCCACTGCAATCTTCACGGGAGCTaGGGCCAACTCATGGGAGAGGCGGTCCTGTCTGGGAGAGGGGAC +
Preference number: 5 (lower is better)
Translates to: SQLPGKPPHCNLHGS*GQLMGEAVLSGRGD
Trigger: GTCCCCTCTCCCAGACAGGACCGCCTCTCCCATGAGTTGGCCCCAGCTCCCGTGAAGATTGCAGTGGGGAGGTTTCCCTGGGAGTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGGCCAGTGTCTCCCTaGGGTCCCTCGACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGPVSP*GPSTPV
Trigger: CACCGGCGTCGAGGGACCCAAGGGAGACACTGGCCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCTCACCGCTGTTACCCTaGGGACCAGGAGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGSPLLP*GPGGPP
Trigger: CGGCGGCCCTCCTGGTCCCAAGGGTAACAGCGGTGA...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGGCACCAGTGTCTCCTTaGCTGCCAGGAGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: MARLLWQSENPRSPRAWGAPVSP*LPGAPG
Trigger: ACCTGGTGCTCCTGGCAGCAAAGGAGACACTGGTGC...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGTGCGGGCGGGGTTCTaGCGGCTGCCCTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGVRAGF*RLPSGL
Trigger: GAGCCCAGAGGGCAGCCGCAAGAACCCCGCCCGCAC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS GCA 90 bp TCCCACTGTGGCCATCTCTCCCAACTCCCAGGGAAACCTCCCCACTaGAATCTTCACGGGAGCTGGGGCCAACTCATGGGAGAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: SHCGHLSQLPGKPPH*NLHGSWGQLMGEAV
Trigger: GACCGCCTCTCCCATGAGTTGGCCCCAGCTCCCGTGAAGATTGCAGTGGGGAGGTTTCCCTGGGAGTTGGGAGAGATGGCCACAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS CCA 90 bp TGTACGCAGGTGATTGGTGGGATGTCTTCGTCTTGGCCCTCGACTTaGCCTTCCTCTTGGCCGTGCGTCAGGAGGGCGGTGGCCGCTAAG +
Preference number: 5 (lower is better)
Translates to: CTQVIGGMSSSWPST*PSSWPCVRRAVAAK
Trigger: CTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 90 bp ATCAGCCCGGTAGTAGCGGCCACCATCGTGAGCCTTCTCTTGAGGTaGCTGGGGCAGGAAGCTGAAGTCGAAACCAGCGCTGGGAGGACC +
Preference number: 5 (lower is better)
Translates to: ISPVVAATIVSLLLR*LGQEAEVETSAGRT
Trigger: GGTCCTCCCAGCGCTGGTTTCGACTTCAGCTTCCTGCCCCAGCCACCTCAAGAGAAGGCTCACGATGGTGGCCGCTACTACCGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGGACCTTGGAAGCCTaGGGGACCAGGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGTLEA*GTRCTR
Trigger: CCTGGTGCACCTGGTCCCCAAGGCTTCCAAGGTCCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAACCTCTCTCGCCTCTaGCTCCAGAGGGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGNLSRL*LQRGQG
Trigger: CCCCTGGCCCCTCTGGAGCAAGAGGCGAGAGAGGTT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTTTGCCGGGAGCACCGTaGGCCCCTCGGGGACCAGCA +
Preference number: 5 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPLPGAP*APRGPA
Trigger: TGCTGGTCCCCGAGGGGCCAACGGTGCTCCCGGCAA...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCTCGCCTGTCTCACCCTaGTCACCACGGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGSPVSP*SPRGPW
Trigger: CCAAGGCCCCCGTGGTGACAAGGGTGAGACAGGCGA...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp ATGGCAAGGCTTCTTTGGCAGTCTGAGAACCCCAGGTCCCCCAGGGCCTGGGGGCTGCGGCACAAGGGATaGACACGCGTTCCCCAAATC +
Preference number: 5 (lower is better)
Translates to: MARLLWQSENPRSPRAWGLRHKG*TRVPQI
Trigger: GATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAG...CCCCCAGGCCCTGGGGGACCTGGGGTTCTCAGACTGCCAAAGAAGCCTTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp TGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTTaGGGGTGGTGTCCACCTCGAGGTCACGGTCACGAACCACATTGG +
Preference number: 5 (lower is better)
Translates to: CPLGSGCSRSAGSGS*GWCPPRGHGHEPHW
Trigger: CCAATGTGGTTCGTGACCGTGACCTCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGGAGCCCAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS TCA 90 bp AGGCAGGCCACGGGGGCCCTGACAACCAAACCAAGAGAAGTCAGATaGGATGGGAGACAGCCTTGTTCCCCCAGGCCTCCATCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: RQATGALTTKPREVR*DGRQPCSPRPPSCP
Trigger: GGGGCAAGATGGAGGCCTGGGGGAACAAGGCTGTCTCCCATCTCATCTGACTTCTCTTGGTTTGGTTGTCAGGGCCCCCGTGGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485870.1
CDS GCA 90 bp ACCTCTAGTCCTGCCTGGCCTCCCTGTCCAGGGTCCTCAGAGAGCTaGCCAATGCACCGTTATATCGAGAGGAGGCACCACCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: TSSPAWPPCPGSSES*PMHRYIERRHHLPI
Trigger: GATGGGCAGGTGGTGCCTCCTCTCGATATAACGGTGCATTGGGCAGCTCTCTGAGGACCCTGGACAGGGAGGCCAGGCAGGACTAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510710.3
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGACTTGGCCTTCCTCTaGGCCGTGCGTCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQDLAFL*AVRQEG
Trigger: GCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTAGGACCAGGGGGACCTaGCACACCACGCTCGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLRTRGT*HTTLAR
Trigger: CCTGGCGAGCGTGGTGTGCAAGGTCCCCCTGGTCCT...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCCCTTAGCACCATCGTaGCCGGGAGCACCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRPLAPS*PGAPLA
Trigger: GGCCAACGGTGCTCCCGGCAACGATGGTGCTAAGGG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCTGCCGCGAGCACCTTaGGCTCCAGGAGCACCAACA +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGLPRAP*APGAPT
Trigger: TGTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCAG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGCTCCAGAGGGACCTaGTTCACCAGGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGSRGT*FTRRAR
Trigger: CCTGGCTCTCCTGGTGAACAAGGTCCCTCTGGAGCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp ACACCCATCCCCAGGCCTCTAAGGAGGCCTGAAGAGTCCCTGGCCTaGCCAGGTACAGGGAACTGGAGCCCAGCTACTTACAGTCTCACC +
Preference number: 5 (lower is better)
Translates to: TPIPRPLRRPEESLA*PGTGNWSPATYSLT
Trigger: GGTGAGACTGTAAGTAGCTGGGCTCCAGTTCCCTGTACCTGGTCAGGCCAGGGACTCTTCAGGCCTCCTTAGAGGCCTGGGGATGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS CCA 90 bp GTCTTAACAGGTCTTCTGTACTTACGGGGGCACCACGAGCTCCAGTaGGACCAGCAGGGCCGCTGGGACCACTTTCACCCTTGTCACCAG +
Preference number: 5 (lower is better)
Translates to: VLTGLLYLRGHHELQ*DQQGRWDHFHPCHQ
Trigger: CTGGTGACAAGGGTGAAAGTGGTCCCAGCGGCCCTGCTGGTCCCACTGGAGCTCGTGGTGCCCCCGTAAGTACAGAAGACCTGTTAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494334.1
CDS CCA 90 bp GTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTGGTGGGACTaGGACAGGCGGAAGAGGGGCGTTGTCAGTAGTGACTGCAACCCC +
Preference number: 5 (lower is better)
Translates to: VMVPEAVLYAGDWWD*DRRKRGVVSSDCNP
Trigger: GGGGTTGCAGTCACTACTGACAACGCCCCTCTTCCGCCTGTCCCAGTCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507689.1
CDS CCA 90 bp GTCTCGGTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTGGTaGGACTGGGACAGGCGGAAGAGGGGCGTTGTCAGTAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: VSVMVPEAVLYAGDW*DWDRRKRGVVSSDC
Trigger: GCAGTCACTACTGACAACGCCCCTCTTCCGCCTGTCCCAGTCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCATGACCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507689.1
CDS-3UTR CAA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGTCTTGGCCCTCGACTaGGCCTTCCTCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIVLALD*AFLLAV
Trigger: CACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGAC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGCGCCGGGGCAGTTCTaGGTCTCGTCACAGATCACG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRAPGQF*VSSQIT
Trigger: CGTGATCTGTGACGAGACCAAGAACTGCCCCGGCGC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGAGGGCCAGGGGGTCCTaGAACACCAACAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARRARGS*NTNRAR
Trigger: CCTGGCCCTGTTGGTGTTCAAGGACCCCCTGGCCCT...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCTTCCAGTCAGACCCTaGGCACCAGGCAGACCAGCT +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGLPVRP*APGRPA
Trigger: AGCTGGTCTGCCTGGTGCCAAGGGTCTGACTGGAAG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACCAGCCTCTCCATCTTaGCCAGCAGGACCGACAGCG +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQPASPS*PAGPTA
Trigger: CGCTGTCGGTCCTGCTGGCAAAGATGGAGAGGCTGG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTGGAGCCAGCAGGGCCTaGTTCACCTCTCTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLGASRA*FTSLAS
Trigger: GCTGGCGAGAGAGGTGAACAAGGCCCTGCTGGCTCC...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCCCAGAGGGACCTTGTTaGCCAGGTTCACCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGPEGPC*PGSPEG
Trigger: CCCCTCTGGTGAACCTGGCAAACAAGGTCCCTCTGG...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCCACGATCACCACTCTaGCCAGCAGGGCCAACGGGG +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARPRSPL*PAGPTG
Trigger: CCCCGTTGGCCCTGCTGGCAAGAGTGGTGATCGTGG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 90 bp GTCTCGGTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTGGTaGGATGTCTTCGTCTTGGCCCTCGACTTGGCCTTCCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSVMVPEAVLYAGDW*DVFVLALDLAFLLA
Trigger: GGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCATGACCGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 90 bp AAACCCACCTGGGGCCACTCTGCTGGAAAGCACGGTCCTTCCTCCTaGGGTCTGGCCGTGATTAGAGAGGAACCCCTTCTCAGCACTGAA +
Preference number: 5 (lower is better)
Translates to: KPTWGHSAGKHGPSS*GLAVIREEPLLSTE
Trigger: TTCAGTGCTGAGAAGGGGTTCCTCTCTAATCACGGCCAGACCCCAGGAGGAAGGACCGTGCTTTCCAGCAGAGTGGCCCCAGGTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504289.1
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCACAACACCTTGCCGTaGTCGCAGACGCAGATCCGG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRHNTLP*SQTQIR
Trigger: CCGGATCTGCGTCTGCGACAACGGCAAGGTGTTGTG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGGACCACTTTCACCCTaGTCACCAGGGGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQGPLSP*SPGAPA
Trigger: TGCTGGTGCCCCTGGTGACAAGGGTGAAAGTGGTCC...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTCCTTTGCCGCCTTCTTaGCCAGCAGGACCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPPLPPS*PAGPGG
Trigger: CCCTCCTGGTCCTGCTGGCAAAGAAGGCGGCAAAGG...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTTCACCACGGGGACCTTaGCCGCCTTCTTTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGSPRGP*PPSLPA
Trigger: TGCTGGCAAAGAAGGCGGCAAAGGTCCCCGTGGTGA...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTGTCCAGCAATACCTaGAGGCCCGGGAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGLSSNT*RPGSTR
Trigger: CCTGGTACTCCCGGGCCTCAAGGTATTGCTGGACAG...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTCACCACGGTCACCCTaGGCGCCAGGAGAACCGTCT +
Preference number: 5 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGSPRSP*APGEPS
Trigger: AGACGGTTCTCCTGGCGCCAAGGGTGACCGTGGTGA...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTGGGCCAGGGAGACCGTaGAGTCCATCTTTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGGPGRP*SPSLPG
Trigger: TCCTGGCAAAGATGGACTCAACGGTCTCCCTGGCCC...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTTGCTGGCTCAGGCTCTaGAGGGTGGTGTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPCWLRL*RVVSTS
Trigger: CGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCA...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTCAGAGTGGCACATCTaGAGGTCACGGCAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGISEWHI*RSRQVR
Trigger: CCGCACCTGCCGTGACCTCAAGATGTGCCACTCTGA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 90 bp CACGTCTCGGTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTaGTGGGATGTCTTCGTCTTGGCCCTCGACTTGGCCTTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: HVSVMVPEAVLYAGD*WDVFVLALDLAFLL
Trigger: CAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCATGACCGAGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 90 bp CTAGCCCATCTCCTAACACTGGCTCTGAGGTCCAGCTCACGCACCTaGAATCCATCGGTCATGCTCTCGCCGAACCAGACATGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LAHLLTLALRSSSRT*NPSVMLSPNQTCLL
Trigger: CAAGAGGCATGTCTGGTTCGGCGAGAGCATGACCGATGGATTCCAGGTGCGTGAGCTGGACCTCAGAGCCAGTGTTAGGAGATGGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510710.3
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAACCCTGTTCACCAGGTTaGCCTGCTTCACCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQPCSPG*PASPGG
Trigger: TCCTCCAGGTGAAGCAGGCAAACCTGGTGAACAGGG...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGGAGCCATCAGCACCTTaGGGACCAGCATCACCTCTG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVREPSAP*GPASPL
Trigger: CAGAGGTGATGCTGGTCCCAAAGGTGCTGATGGCTC...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp AGCCCTGCGGCACAAGGGATTGACACGCGTTCCCCAAATCCGATGTTTCTGCTTCCACGGACGCCATCTTaGCCAGGAGAGCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: SPAAQGIDTRSPNPMFLLPRTPS*PGEPSA
Trigger: TGCTGATGGCTCTCCTGGCAAAGATGGCGTCCGTGG...AAGCAGAAACATCGGATTTGGGGAACGCGTGTCAATCCCTTGTGCCGCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGCCGTTGAGTCCATCTTaGCCAGGAGCACCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRPLSPS*PGAPAE
Trigger: CTCTGCTGGTGCTCCTGGCAAAGATGGACTCAACGG...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTTGGGAGGGAGCCAGGTaGGGATGGAGGGAGTTTACA +
Preference number: 5 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIWEGAR*GWREFT
Trigger: TGTAAACTCCCTCCATCCCAACCTGGCTCCCTCCCA...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp TGCTCTCGCCGAACCAGACATGCCTCTTGTCCTTGGGGTTCTTGCTaGTGTACCAGTTCTTCTGGGCCACACTGGGCTGAGTGGGGTACA +
Preference number: 5 (lower is better)
Translates to: CSRRTRHASCPWGSC*CTSSSGPHWAEWGT
Trigger: TGTACCCCACTCAGCCCAGTGTGGCCCAGAAGAACTGGTACATCAGCAAGAACCCCAAGGACAAGAGGCATGTCTGGTTCGGCGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAGACATGTAGACTCTTaGTGGCTGGGGAGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGRHVDS*WLGRGL
Trigger: TAACCCCCTCCCCAGCCACAAAGAGTCTACATGTCT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGTCATCGCACAACACCTaGCCGTTGTCGCAGACGCAG +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARSSHNT*PLSQTQ
Trigger: CTGCGTCTGCGACAACGGCAAGGTGTTGTGCGATGA...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGGGACCAGCATCTCCCTaGGCACCATCCAAACCACTG +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARGPASP*APSKPL
Trigger: CAGTGGTTTGGATGGTGCCAAGGGAGATGCTGGTCC...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTATACCAGGAGCACCATaGGCACCTTTAGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGIPGAP*APLAPG
Trigger: GCCTGGTGCTAAAGGTGCCAATGGTGCTCCTGGTAT...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp AAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTTTCACCAGCGGGACCCTaGGGACCAGCAACACCATCT +
Preference number: 5 (lower is better)
Translates to: KNEGEMLQEPWERQMARLSPAGP*GPATPS
Trigger: AGATGGTGTTGCTGGTCCCAAGGGTCCCGCTGGTGA...AAGCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCATTGGGGTTTCATAAGCCCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTGACCACGTTCACCACTaGCTCCAGAGGGACCTTGTT +
Preference number: 5 (lower is better)
Translates to: ALGFHKPNGQKGTYPRMGDHVHH*LQRDLV
Trigger: AACAAGGTCCCTCTGGAGCAAGTGGTGAACGTGGTC...ACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGGGCTTATGAAACCCCAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAACCAGACATGCCTCTaGTCCTTGGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGNQTCL*SLGFLL
Trigger: CAGCAAGAACCCCAAGGACAAGAGGCATGTCTGGTT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCGGCAGGCGGGAGGTCTaGGTGGTTTTGTATTCAATC +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGGRREV*VVLYSI
Trigger: GATTGAATACAAAACCACCAAGACCTCCCGCCTGCC...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCTGCTCCAGAGGGACCTaGTTTGCCAGGTTCACCAGA +
Preference number: 5 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGCSRGT*FARFTR
Trigger: TCTGGTGAACCTGGCAAACAAGGTCCCTCTGGAGCA...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CGATGTTTCTGCTTTGTCGTGGCCCTTCCTGACTCTCCTCCGAACCCAGTGAGGTTCAGTTTGGGTTGCTaGTCTGTTTCCGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RCFCFVVALPDSPPNPVRFSLGC*SVSGLG
Trigger: CCCCAACCCGGAAACAGACAAGCAACCCAAACTGAA...CCTCACTGGGTTCGGAGGAGAGTCAGGAAGGGCCACGACAAAGCAGAAACATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CCAACGGGCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAATTGTGCTTTGGGAAGTaGTCTCTGAAACCCGGGGAC +
Preference number: 5 (lower is better)
Translates to: PTGRKGLTPAWVFKQVDQLCFGK*SLKPGD
Trigger: GTCCCCGGGTTTCAGAGACAACTTCCCAAAGCACAA...TTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGCCCGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp AGGACCAGAGGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTTaGTTTCTCATCATAGCCATAAGACAGCTGGGGAGCAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RTRGTHGARHGNSSG*FLIIAIRQLGSKVS
Trigger: GGAAACTTTGCTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCCTCTGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCTTGTCCTTGGGGTTCTaGCTGATGTACCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGLSLGF*LMYQFF
Trigger: GAAGAACTGGTACATCAGCAAGAACCCCAAGGACAA...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGGGGTTCAGTTTGGGTaGCTTGTCTGTTTCCGGGTT +
Preference number: 5 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGGVQFG*LVCFRV
Trigger: AACCCGGAAACAGACAAGCAACCCAAACTGAACCCC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCTGGGCAGACAATACATaGTTTCCTGTGTCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGWADNT*FPVSSG
Trigger: CCCAGAAGACACAGGAAACAATGTATTGTCTGCCCA...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp TCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGGGCCACTTGGGTGTTaGAGCATTGCCTTTGATTGC +
Preference number: 5 (lower is better)
Translates to: SKTKGRCCKSHGSARWQGGPLGC*SIAFDC
Trigger: GCAATCAAAGGCAATGCTCAAACACCCAAGTGGCCC...GCCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp AGGACCAGAGGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTTaGTTTCTCATCATAGCCATAAGACAGCTGGGGAGCAAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: RTRGTHGARHGNSSG*FLIIAIRQLGSKVL
Trigger: TAGAACTTTGCTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCCTCTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS GCA 90 bp AAACTGTCAGGCGGAAGTTCCATTGGCATCGAGTGGGGCACTGTCTaGATCTGTAGAGTTCTAAAGGCATGGGGGACACAGCAGGGTACT +
Preference number: 5 (lower is better)
Translates to: KLSGGSSIGIEWGTV*ICRVLKAWGTQQGT
Trigger: AGTACCCTGCTGTGTCCCCCATGCCTTTAGAACTCTACAGATGCAGACAGTGCCCCACTCGATGCCAATGGAACTTCCGCCTGACAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGACATGCCTCTTGTCCTaGGGGTTCTTGCTGATGTAC +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARTCLLS*GFLLMY
Trigger: GTACATCAGCAAGAACCCCAAGGACAAGAGGCATGT...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTTTGAGGGGGTTCAGTTaGGGTTGCTTGTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPLRGFS*GCLSVS
Trigger: GGAAACAGACAAGCAACCCAAACTGAACCCCCTCAA...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 90 bp AGAGAAAGGGACAAACTGTCAGGCGGAAGTTCCATTGGCATCGAGTaGGGCACTGTCTGCATCTGTAGAGTTCTAAAGGCATGGGGGACA +
Preference number: 5 (lower is better)
Translates to: RERDKLSGGSSIGIE*GTVCICRVLKAWGT
Trigger: TGTCCCCCATGCCTTTAGAACTCTACAGATGCAGACAGTGCCCCACTCGATGCCAATGGAACTTCCGCCTGACAGTTTGTCCCTTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS-3UTR CAA 90 bp CAGCAACACAGTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCAGGTTGAATGCACTTTaGGTTTTTGGTCATGTTCGG +
Preference number: 5 (lower is better)
Translates to: QQHSYTRNRTVSPAQPCGRLNAL*VFGHVR
Trigger: CCGAACATGACCAAAAACCAAAAGTGCATTCAACCT...GCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAACTGTGTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp CTCAAAAACGAAGGGGAGATGTTGCAAGAGCCATGGGAGCGCCAGATGGCAAGGCGGAAATTCCTCCGGTaGATTTCTCATCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: LKNEGEMLQEPWERQMARRKFLR*ISHHSH
Trigger: ATGGCTATGATGAGAAATCAACCGGAGGAATTTCCG...CCTTGCCATCTGGCGCTCCCATGGCTCTTGCAACATCTCCCCTTCGTTTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GTTACACAAGGAACAGAACAGTCTCTCCCGCCCAGCCCTGCGGCACAAGGGATTGAGGTCTTGGTGGTTTaGTATTCAATCACTGTCTTG +
Preference number: 5 (lower is better)
Translates to: VTQGTEQSLPPSPAAQGIEVLVV*YSITVL
Trigger: CAAGACAGTGATTGAATACAAAACCACCAAGACCTC...AATCCCTTGTGCCGCAGGGCTGGGCGGGAGAGACTGTTCTGTTCCTTGTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS-3UTR CAA 90 bp GCAGAAAGGGACTTACCCCCGCATGGGTCTTCAAGCAAGTGGACCAAGCTTCCTATGCACTTTTGGTTTTaGGTCATGTTCGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: AERDLPPHGSSSKWTKLPMHFWF*VMFGWS
Trigger: TGACCAACCGAACATGACCAAAAACCAAAAGTGCAT...AGGAAGCTTGGTCCACTTGCTTGAAGACCCATGCGGGGGTAAGTCCCTTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS TCA 90 bp ACGGCACTGAGGATGGAAGAAACTGACATCATGCACTTCCTGGTGTaGTGTGCTGAGAAGAATAACATTGCTTTTAAGACATTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: TALRMEETDIMHFLV*CAEKNNIAFKTFLQ
Trigger: TTGCAGGAATGTCTTAAAAGCAATGTTATTCTTCTCAGCACATCACACCAGGAAGTGCATGATGTCAGTTTCTTCCATCCTCAGTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS GCA 90 bp TGTGCTGAGAAGAATAACATTGCTTTTAAGACATTCCTGCAAAGATaGATCCCTGCATCTAATCTAATGAGACAATCCCAAATTGAGGGA +
Preference number: 5 (lower is better)
Translates to: CAEKNNIAFKTFLQR*IPASNLMRQSQIEG
Trigger: TCCCTCAATTTGGGATTGTCTCATTAGATTAGATGCAGGGATGCATCTTTGCAGGAATGTCTTAAAAGCAATGTTATTCTTCTCAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS CCA 72 bp TTGTGGCTGGGGAGGGGGTTAGCGTCCGCTCATGCGTaGCCTCACACTCCGCGTGCCTCCTGCTCCGACCCC +
Preference number: 6 (lower is better)
Translates to: LWLGRGLASAHA*PHTPRASCSDP
Trigger: GGGGTCGGAGCAGGAGGCACGCGGAGTGTGAGGCCACGCATGAGCGGACGCTAACCCCCTCCCCAGCCACAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CAA 72 bp AGGGAGACCCTGGAATCCGGGGGAGCCAGCAGGGCCTaGTTCACCTCTCTCGCCAGCGGGACCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RETLESGGASRA*FTSLASGTSRA
Trigger: GGCCCTGCTGGTCCCGCTGGCGAGAGAGGTGAACAAGGCCCTGCTGGCTCCCCCGGATTCCAGGGTCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000476387.1
CDS GCA 72 bp GTTAGCGTCCGCTCATGCGTGGCCTCACACTCCGCGTaGCTCCTGCTCCGACCCCGAGGAGAAACTCCCGTC +
Preference number: 6 (lower is better)
Translates to: VSVRSCVASHSA*LLLRPRGETPV
Trigger: GACGGGAGTTTCTCCTCGGGGTCGGAGCAGGAGGCACGCGGAGTGTGAGGCCACGCATGAGCGGACGCTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS GCA 72 bp CTCTTTGTGGCTGGGGAGGGGGTTAGCGTCCGCTCATaGGTGGCCTCACACTCCGCGTGCCTCCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LFVAGEGVSVRS*VASHSACLLLR
Trigger: TCGGAGCAGGAGGCACGCGGAGTGTGAGGCCACGCATGAGCGGACGCTAACCCCCTCCCCAGCCACAAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS GCA 72 bp TCGTCTTGGCCCTCGACTTGGCCTTCCTCTTGGCCGTaGGTCAGGAGGGCGGTGGCCGCTAAGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSWPSTWPSSWP*VRRAVAAKRSR
Trigger: CCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 72 bp CTTGGCCTTCCTCTTGGCCGTGCGTCAGGAGGGCGGTaGCCGCTAAGAGGAGCAGGAGCCGGAGGTCCACAA +
Preference number: 6 (lower is better)
Translates to: LGLPLGRASGGR*PLRGAGAGGPQ
Trigger: TTGTGGACCTCCGGCTCCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 72 bp GTGTCTCCCTTGGGTCCCTCGACGCCGGTGGTTTCTTaGTCGGTGGGTGACTCTGAGCCGTCGGGGCAGACG +
Preference number: 6 (lower is better)
Translates to: VSPLGPSTPVVS*SVGDSEPSGQT
Trigger: CGTCTGCCCCGACGGCTCAGAGTCACCCACCGACCAAGAAACCACCGGCGTCGAGGGACCCAAGGGAGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000507689.1
CDS CCA 72 bp CGCACACCCTGGGGACCTTCAGAGCCTCGGGGCCCTTaGGGACCAGCTTCACCCTTAGCACCAACAGCACCA +
Preference number: 6 (lower is better)
Translates to: RTPWGPSEPRGP*GPASPLAPTAP
Trigger: TGGTGCTGTTGGTGCTAAGGGTGAAGCTGGTCCCCAAGGGCCCCGAGGCTCTGAAGGTCCCCAGGGTGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 72 bp CGGCTGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTaGCTCAGGCTCTTGAGGGTGGTGTCCACCTCGAGG +
Preference number: 6 (lower is better)
Translates to: RLPSGLRMFSIC*LRLLRVVSTSR
Trigger: CCTCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGGAGCCCAGAGGGCAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS CCA 72 bp CGAGGGCAGGAGATTACCTCGACGCCGGTGGTTTCTTaGTCGGTGGGTGACTCTGAGCCGTCGGGGCAGACG +
Preference number: 6 (lower is better)
Translates to: RGQEITSTPVVS*SVGDSEPSGQT
Trigger: CGTCTGCCCCGACGGCTCAGAGTCACCCACCGACCAAGAAACCACCGGCGTCGAGGTAATCTCCTGCCCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474644.1
CDS GCA 72 bp CCCAGCTACTTACAGTCTCACCACGATCACCACTCTTaGCAGCAGGGCCAACGGGGCCAGGGGCACCAGGAG +
Preference number: 6 (lower is better)
Translates to: PSYLQSHHDHHS*QQGQRGQGHQE
Trigger: CTCCTGGTGCCCCTGGCCCCGTTGGCCCTGCTGGCAAGAGTGGTGATCGTGGTGAGACTGTAAGTAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS CCA 72 bp ATGTCTTCGTCTTGGCCCTCGACTTGGCCTTCCTCTTaGCCGTGCGTCAGGAGGGCGGTGGCCGCTAAGAGG +
Preference number: 6 (lower is better)
Translates to: MSSSWPSTWPSS*PCVRRAVAAKR
Trigger: CCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 72 bp GGTCTTCTGTACTTACGGGGGCACCACGAGCTCCAGTaGGACCAGCAGGGCCGCTGGGACCACTTTCACCCT +
Preference number: 6 (lower is better)
Translates to: GLLYLRGHHELQ*DQQGRWDHFHP
Trigger: AGGGTGAAAGTGGTCCCAGCGGCCCTGCTGGTCCCACTGGAGCTCGTGGTGCCCCCGTAAGTACAGAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494334.1
CDS CCA 72 bp CCCACTGCAATCTTCACGGGAGCTGGGGCCAACTCATaGGAGAGGCGGTCCTGTCTGGGAGAGGGGACTTGG +
Preference number: 6 (lower is better)
Translates to: PTAIFTGAGANS*ERRSCLGEGTW
Trigger: CCAAGTCCCCTCTCCCAGACAGGACCGCCTCTCCCATGAGTTGGCCCCAGCTCCCGTGAAGATTGCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS CCA 72 bp CCAGGGAAACCTCCCCACTGCAATCTTCACGGGAGCTaGGGCCAACTCATGGGAGAGGCGGTCCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PGKPPHCNLHGS*GQLMGEAVLSG
Trigger: CCCAGACAGGACCGCCTCTCCCATGAGTTGGCCCCAGCTCCCGTGAAGATTGCAGTGGGGAGGTTTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS CAA 72 bp CACTCGCCCTCGGGGACTTCGGCGCCGGGGCAGTTCTaGGTCTCGTCACAGATCACGTCATCGCACAACACC +
Preference number: 6 (lower is better)
Translates to: HSPSGTSAPGQF*VSSQITSSHNT
Trigger: GGTGTTGTGCGATGACGTGATCTGTGACGAGACCAAGAACTGCCCCGGCGCCGAAGTCCCCGAGGGCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225964.10
ENST00000474644.1
ENST00000507689.1
CDS CAA 72 bp GTAGCACCAGGGGGACCAGCGCTGCCGCGAGCACCTTaGGCTCCAGGAGCACCAACATTACCAATGGGGCCA +
Preference number: 6 (lower is better)
Translates to: VAPGGPALPRAP*APGAPTLPMGP
Trigger: TGGCCCCATTGGTAATGTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCAGCGCTGGTCCCCCTGGTGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CAA 90 bp ACGGGACAGCACTCGCCCTCGGGGACTTCGGCGCCGGGGCAGTTCTaGGTCTCGTCACAGATCACGTCATCGCACAACACCTTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: TGQHSPSGTSAPGQF*VSSQITSSHNTLPL
Trigger: CAACGGCAAGGTGTTGTGCGATGACGTGATCTGTGACGAGACCAAGAACTGCCCCGGCGCCGAAGTCCCCGAGGGCGAGTGCTGTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225964.10
ENST00000474644.1
ENST00000507689.1
CDS CAA 90 bp CCTGAGGCCGTTCTGTACGCAGGTGATTGGTGGGATGTCTTCGTCTaGGCCCTCGACTTGGCCTTCCTCTTGGCCGTGCGTCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PEAVLYAGDWWDVFV*ALDLAFLLAVRQEG
Trigger: GCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACAGAACGGCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CAA 90 bp CCCTTGGGCCTCGGGGGCCAGTGTCTCCCTTGGGTCCCTGTGGGATaGGGGGAGAAGAAACAAGAGGCCAGGTTAGAGAAGGGAGGACTG +
Preference number: 6 (lower is better)
Translates to: PLGLGGQCLPWVPVG*GEKKQEARLEKGGL
Trigger: CAGTCCTCCCTTCTCTAACCTGGCCTCTTGTTTCTTCTCCCCCAATCCCACAGGGACCCAAGGGAGACACTGGCCCCCGAGGCCCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474644.1
CDS CCA 72 bp ACTCGCCCTCGGGGACTTCGGCGCCGGGGCAGTTCTTaGTCTCGTCACAGATCACGTCATCGCACAACACCT +
Preference number: 6 (lower is better)
Translates to: TRPRGLRRRGSS*SRHRSRHRTTP
Trigger: AGGTGTTGTGCGATGACGTGATCTGTGACGAGACCAAGAACTGCCCCGGCGCCGAAGTCCCCGAGGGCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225964.10
ENST00000474644.1
ENST00000507689.1
CDS CCA 72 bp GTCAGCTGGATGGCCACATCGGCAGGGTCGGAGCCCTaGCCGCCATACTCGAACTGGAATCCATCGGTCATG +
Preference number: 6 (lower is better)
Translates to: VSWMATSAGSEP*PPYSNWNPSVM
Trigger: CATGACCGATGGATTCCAGTTCGAGTATGGCGGCCAGGGCTCCGACCCTGCCGATGTGGCCATCCAGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CAA 72 bp GGTGATTGGTGGGATGTCTTCGTCTTGGCCCTCGACTaGGCCTTCCTCTTGGCCGTGCGTCAGGAGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GDWWDVFVLALD*AFLLAVRQEGG
Trigger: ACCGCCCTCCTGACGCACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CAA 72 bp GGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTaGAGGGTGGTGTCCACCTCGAGGTCACGGTCACGA +
Preference number: 6 (lower is better)
Translates to: GLRMFSICWLRL*RVVSTSRSRSR
Trigger: TCGTGACCGTGACCTCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS CAA 90 bp CTGCCCTCTGGGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTaGAGGGTGGTGTCCACCTCGAGGTCACGGTCACGAACCACATTG +
Preference number: 6 (lower is better)
Translates to: LPSGLRMFSICWLRL*RVVSTSRSRSRTTL
Trigger: CAATGTGGTTCGTGACCGTGACCTCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGGAGCCCAGAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS TCA 72 bp GGCTCCGGATGTTCTCGATCTGCTGGCTCAGGCTCTTaGGGGTGGTGTCCACCTCGAGGTCACGGTCACGAA +
Preference number: 6 (lower is better)
Translates to: GSGCSRSAGSGS*GWCPPRGHGHE
Trigger: TTCGTGACCGTGACCTCGAGGTGGACACCACCCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS TCA 72 bp CATCCCTGCCCTCTGGAACTGGGCACACTCACCATCTaGCCAGGAGCTCCATTTTCACCAGGGCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: HPCPLELGTLTI*PGAPFSPGLPG
Trigger: GCCTGGCAGCCCTGGTGAAAATGGAGCTCCTGGTCAGATGGTGAGTGTGCCCAGTTCCAGAGGGCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485870.1
CDS TCA 72 bp CCCAGGCCTCTAAGGAGGCCTGAAGAGTCCCTGGCCTaGCCAGGTACAGGGAACTGGAGCCCAGCTACTTAC +
Preference number: 6 (lower is better)
Translates to: PRPLRRPEESLA*PGTGNWSPATY
Trigger: GTAAGTAGCTGGGCTCCAGTTCCCTGTACCTGGTCAGGCCAGGGACTCTTCAGGCCTCCTTAGAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486572.1
ENST00000511732.1
CDS CCA 72 bp CCTGAGGCCGTTCTGTACGCAGGTGATTGGTGGGACTaGGACAGGCGGAAGAGGGGCGTTGTCAGTAGTGAC +
Preference number: 6 (lower is better)
Translates to: PEAVLYAGDWWD*DRRKRGVVSSD
Trigger: GTCACTACTGACAACGCCCCTCTTCCGCCTGTCCCAGTCCCACCAATCACCTGCGTACAGAACGGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507689.1
CDS CCA 72 bp TGGGGCCACTCTGCTGGAAAGCACGGTCCTTCCTCCTaGGGTCTGGCCGTGATTAGAGAGGAACCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: WGHSAGKHGPSS*GLAVIREEPLL
Trigger: GAGAAGGGGTTCCTCTCTAATCACGGCCAGACCCCAGGAGGAAGGACCGTGCTTTCCAGCAGAGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504289.1
CDS CCA 72 bp TGGTGTCCACCTCGAGGTCACGGTCACGAACCACATTaGCATCATCAGCCCGGTAGTAGCGGCCACCATCGT +
Preference number: 6 (lower is better)
Translates to: WCPPRGHGHEPH*HHQPGSSGHHR
Trigger: ACGATGGTGGCCGCTACTACCGGGCTGATGATGCCAATGTGGTTCGTGACCGTGACCTCGAGGTGGACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS CCA 72 bp GCAAAATTCGAGGGCAGGAGATTACCTCGACGCCGGTaGTTTCTTGGTCGGTGGGTGACTCTGAGCCGTCGG +
Preference number: 6 (lower is better)
Translates to: AKFEGRRLPRRR*FLGRWVTLSRR
Trigger: CCGACGGCTCAGAGTCACCCACCGACCAAGAAACCACCGGCGTCGAGGTAATCTCCTGCCCTCGAATTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474644.1
CDS CCA 72 bp ATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTGGTaGGACTGGGACAGGCGGAAGAGGGGCGTTGTCAGT +
Preference number: 6 (lower is better)
Translates to: MVPEAVLYAGDW*DWDRRKRGVVS
Trigger: ACTGACAACGCCCCTCTTCCGCCTGTCCCAGTCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507689.1
CDS CAA 72 bp GTGATTGGTGGGACTGGGACAGGCGGAAGAGGGGCGTaGTCAGTAGTGACTGCAACCCCCAGCTTAACCACC +
Preference number: 6 (lower is better)
Translates to: VIGGTGTGGRGA*SVVTATPSLTT
Trigger: GGTGGTTAAGCTGGGGGTTGCAGTCACTACTGACAACGCCCCTCTTCCGCCTGTCCCAGTCCCACCAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507689.1
CDS TCA 72 bp ACGGGGGCCCTGACAACCAAACCAAGAGAAGTCAGATaGGATGGGAGACAGCCTTGTTCCCCCAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: TGALTTKPREVR*DGRQPCSPRPP
Trigger: TGGAGGCCTGGGGGAACAAGGCTGTCTCCCATCTCATCTGACTTCTCTTGGTTTGGTTGTCAGGGCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485870.1
CDS GCA 72 bp CCTGGCCGCCATACTCGAACTGGAATCCATCGGTCATaGTCTCGCCGAACCAGACATGCCTCTTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PGRHTRTGIHRS*SRRTRHASCPW
Trigger: CCAAGGACAAGAGGCATGTCTGGTTCGGCGAGAGCATGACCGATGGATTCCAGTTCGAGTATGGCGGCCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CCA 72 bp GTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTaGTGGGATGTCTTCGTCTTGGCCCTCGACTTGGCC +
Preference number: 6 (lower is better)
Translates to: VMVPEAVLYAGD*WDVFVLALDLA
Trigger: GGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 72 bp CTCCTAACACTGGCTCTGAGGTCCAGCTCACGCACCTaGAATCCATCGGTCATGCTCTCGCCGAACCAGACA +
Preference number: 6 (lower is better)
Translates to: LLTLALRSSSRT*NPSVMLSPNQT
Trigger: TGTCTGGTTCGGCGAGAGCATGACCGATGGATTCCAGGTGCGTGAGCTGGACCTCAGAGCCAGTGTTAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510710.3
CDS TCA 72 bp GGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTTaGTTTCTCATCATAGCCATAAGACAGCTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: GTHGARHGNSSG*FLIIAIRQLGS
Trigger: GCTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000495677.1
CDS CCA 72 bp ATGGTACCTGAGGCCGTTCTGTACGCAGGTGATTGGTaGGATGTCTTCGTCTTGGCCCTCGACTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: MVPEAVLYAGDW*DVFVLALDLAF
Trigger: GAAGGCCAAGTCGAGGGCCAAGACGAAGACATCCCACCAATCACCTGCGTACAGAACGGCCTCAGGTACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000474644.1
CDS CCA 72 bp CTCACCACGGTCTCCCTAGAAGAAAAGGAGTCAGATTaGAGAGATGCGCTGACAGGAGGGAAGGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: LTTVSLEEKESD*RDALTGGKAGM
Trigger: CATCCCCGCCTTCCCTCCTGTCAGCGCATCTCTCCAATCTGACTCCTTTTCTTCTAGGGAGACCGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494334.1
CDS TCA 72 bp CGAACCAGACATGCCTCTTGTCCTTGGGGTTCTTGCTaGTGTACCAGTTCTTCTGGGCCACACTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RTRHASCPWGSC*CTSSSGPHWAE
Trigger: CTCAGCCCAGTGTGGCCCAGAAGAACTGGTACATCAGCAAGAACCCCAAGGACAAGAGGCATGTCTGGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS GCA 72 bp GGCGGAAGTTCCATTGGCATCGAGTGGGGCACTGTCTaGATCTGTAGAGTTCTAAAGGCATGGGGGACACAG +
Preference number: 6 (lower is better)
Translates to: GGSSIGIEWGTV*ICRVLKAWGTQ
Trigger: CTGTGTCCCCCATGCCTTTAGAACTCTACAGATGCAGACAGTGCCCCACTCGATGCCAATGGAACTTCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS CCA 72 bp AGGGCAGTGTGGGCAACCCATGCCCCTTCATTATTCTaGAAATCTAGCCCGAGGGTGTCCATAGGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: RAVWATHAPSLF*KSSPRVSIGRD
Trigger: GTCTCTGCCTATGGACACCCTCGGGCTAGATTTCCAGAATAATGAAGGGGCATGGGTTGCCCACACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486572.1
CDS CCA 72 bp AGACCTACTCCAGGACTTCATGTCCCTTCTGAGCACTaGGCTAGCCCATCTCCTAACACTGGCTCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: RPTPGLHVPSEH*ASPSPNTGSEV
Trigger: GACCTCAGAGCCAGTGTTAGGAGATGGGCTAGCCCAGTGCTCAGAAGGGACATGAAGTCCTGGAGTAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510710.3
CDS CAA 72 bp AGGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTaGATTTCTCATCATAGCCATAAGACAGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: RDPWGQARKFLR*ISHHSHKTAGE
Trigger: CTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000495677.1
CDS CAA 90 bp GAGGACCAGAGGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTaGATTTCTCATCATAGCCATAAGACAGCTGGGGAGCAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: EDQRDPWGQARKFLR*ISHHSHKTAGEQSF
Trigger: GAAACTTTGCTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCCTCTGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225964.10
CDS CAA 90 bp GAGGACCAGAGGGACCCATGGGGCCAGGCACGGAAATTCCTCCGGTaGATTTCTCATCATAGCCATAAGACAGCTGGGGAGCAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: EDQRDPWGQARKFLR*ISHHSHKTAGEQSS
Trigger: AGAACTTTGCTCCCCAGCTGTCTTATGGCTATGATGAGAAATCAACCGGAGGAATTTCCGTGCCTGGCCCCATGGGTCCCTCTGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS GCA 72 bp TGGAATCCATCGGTCATGCTCTCGCCGAACCAGACATaGCTCTTGTCCTTGGGGTTCTTGCTGATGTACCAG +
Preference number: 6 (lower is better)
Translates to: WNPSVMLSPNQT*LLSLGFLLMYQ
Trigger: CTGGTACATCAGCAAGAACCCCAAGGACAAGAGGCATGTCTGGTTCGGCGAGAGCATGACCGATGGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS CAA 72 bp CCATCGGTCATGCTCTCGCCGAACCAGACATGCCTCTaGTCCTTGGGGTTCTTGCTGATGTACCAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: PSVMLSPNQTCL*SLGFLLMYQFF
Trigger: GAAGAACTGGTACATCAGCAAGAACCCCAAGGACAAGAGGCATGTCTGGTTCGGCGAGAGCATGACCGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225964.10
ENST00000510710.3
CDS CAA 72 bp AGAGAGAAAGGGACAAACTGTCAGGCGGAAGTTCCATaGGCATCGAGTGGGGCACTGTCTGCATCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: REKGTNCQAEVP*ASSGALSASVE
Trigger: CTCTACAGATGCAGACAGTGCCCCACTCGATGCCAATGGAACTTCCGCCTGACAGTTTGTCCCTTTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS CCA 72 bp GACAAACTGTCAGGCGGAAGTTCCATTGGCATCGAGTaGGGCACTGTCTGCATCTGTAGAGTTCTAAAGGCA +
Preference number: 6 (lower is better)
Translates to: DKLSGGSSIGIE*GTVCICRVLKA
Trigger: TGCCTTTAGAACTCTACAGATGCAGACAGTGCCCCACTCGATGCCAATGGAACTTCCGCCTGACAGTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511732.1
CDS CCA 72 bp CCCAGGACTCCTTCAAGTCTCAGGTGTGTTTGTCCCTaGCTCTTCATGGATCCTCACTTAATACTCACAGCA +
Preference number: 6 (lower is better)
Translates to: PRTPSSLRCVCP*LFMDPHLILTA
Trigger: TGCTGTGAGTATTAAGTGAGGATCCATGAAGAGCCAGGGACAAACACACCTGAGACTTGAAGGAGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463440.1
ENST00000471344.1
CDS CAA 72 bp GCCGTGATTAGAGAGGAACCCCTTCTCAGCACTGAATaGAGATTATCCCAAACAGCCCCTCTCTTCCTCCTA +
Preference number: 6 (lower is better)
Translates to: AVIREEPLLSTE*RLSQTAPLFLL
Trigger: TAGGAGGAAGAGAGGGGCTGTTTGGGATAATCTCAATTCAGTGCTGAGAAGGGGTTCCTCTCTAATCACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504289.1
CDS CAA 72 bp TGCACTTCCTGGTGTGATGTGCTGAGAAGAATAACATaGCTTTTAAGACATTCCTGCAAAGATGCATCCCTG +
Preference number: 6 (lower is better)
Translates to: CTSWCDVLRRIT*LLRHSCKDASL
Trigger: CAGGGATGCATCTTTGCAGGAATGTCTTAAAAGCAATGTTATTCTTCTCAGCACATCACACCAGGAAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS CAA 72 bp CCCCAAACTATGGACCAAGATTTATCAATAGAAGGGTaGAGGGAAAGTCACAGCATATTCCAGCAGCTCTTA +
Preference number: 6 (lower is better)
Translates to: PQTMDQDLSIEG*RESHSIFQQLL
Trigger: TAAGAGCTGCTGGAATATGCTGTGACTTTCCCTCAACCCTTCTATTGATAAATCTTGGTCCATAGTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504289.1
CDS CAA 90 bp CTGACATCATGCACTTCCTGGTGTGATGTGCTGAGAAGAATAACATaGCTTTTAAGACATTCCTGCAAAGATGCATCCCTGCATCTAATC +
Preference number: 6 (lower is better)
Translates to: LTSCTSWCDVLRRIT*LLRHSCKDASLHLI
Trigger: GATTAGATGCAGGGATGCATCTTTGCAGGAATGTCTTAAAAGCAATGTTATTCTTCTCAGCACATCACACCAGGAAGTGCATGATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS TCA 72 bp AGGATGGAAGAAACTGACATCATGCACTTCCTGGTGTaGTGTGCTGAGAAGAATAACATTGCTTTTAAGACA +
Preference number: 6 (lower is better)
Translates to: RMEETDIMHFLV*CAEKNNIAFKT
Trigger: TGTCTTAAAAGCAATGTTATTCTTCTCAGCACATCACACCAGGAAGTGCATGATGTCAGTTTCTTCCATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1
CDS GCA 72 bp AAGAATAACATTGCTTTTAAGACATTCCTGCAAAGATaGATCCCTGCATCTAATCTAATGAGACAATCCCAA +
Preference number: 6 (lower is better)
Translates to: KNNIAFKTFLQR*IPASNLMRQSQ
Trigger: TTGGGATTGTCTCATTAGATTAGATGCAGGGATGCATCTTTGCAGGAATGTCTTAAAAGCAATGTTATTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495677.1