RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COL14A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187955

Ensembl transcript IDs: ENST00000247781.4, ENST00000297848.8, ENST00000309791.8, ENST00000432943.6, ENST00000434620.5, ENST00000440844.5, ENST00000498051.6, ENST00000523142.5, ENST00000537875.2

Found 973 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCATGTTAGAAGTCCATCACCAGGGAAGAGCAGGGAGGGGAGGTaGTCAGGGGAGGAAGGGAGAGTAGGGTGGTCAAGGAGAAAGATG +
Preference number: 1 (lower is better)
Translates to: SHVRSPSPGKSREGR*SGEEGRVGWSRRKM
Trigger: CATCTTTCTCCTTGACCACCCTACTCTCCCTTCCTCCCCTGATCACCTCCCCTCCCTGCTCTTCCCTGGTGATGGACTTCTAACATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR GCA 90 bp GGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTGTCTGTCGTCACCTCATCAATTTCT +
Preference number: 1 (lower is better)
Translates to: GIHINLCSPSSAERG*QVTLKLSVVTSSIS
Trigger: AGAAATTGATGAGGTGACGACAGACAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CCA 90 bp TTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTaGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGATGCAGAAGAAGC +
Preference number: 1 (lower is better)
Translates to: LVKFRCYHSIMFGAE*ARGLKVGRQGCRRS
Trigger: GCTTCTTCTGCATCCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR TCA 90 bp ATCTGCAGAGTTTCTAGTCAGTTGAATTTATACAGACCGTTCCTATaGCTTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCC +
Preference number: 1 (lower is better)
Translates to: ICRVSSQLNLYRPFL*LLPQGPLELSCRSP
Trigger: GGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGTATAAATTCAACTGACTAGAAACTCTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CCA 90 bp CATATATACAGACACAAGTGCATATGGCCTTTTATGACCCAACTTTaGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTG +
Preference number: 1 (lower is better)
Translates to: HIYRHKCIWPFMTQL*CSNRCKAAEEKQYL
Trigger: CAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCTGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 90 bp GTCTTATTAGCTGTGTTAGTAACATCTGCAGAGTTTCTAGTCAGTTaGATTTATACAGACCGTTCCTATGACTTCTTCCTCAGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: VLLAVLVTSAEFLVS*IYTDRSYDFFLRVP
Trigger: GGGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGTATAAATTCAACTGACTAGAAACTCTGCAGATGTTACTAACACAGCTAATAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR GCA 90 bp ATATACAGACACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTaGTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAA +
Preference number: 1 (lower is better)
Translates to: IYRHKCIWPFMTQLW*SNRCKAAEEKQYLK
Trigger: TTTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCTGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 90 bp CCACCCCACCAAAGGCACACAAGTAGATTGTTTGAATCCTTCAGATaGAGTCTGAAGATGAATCATCTGAAGAATCCTTCAGATGAAGAT +
Preference number: 1 (lower is better)
Translates to: PPHQRHTSRLFESFR*SLKMNHLKNPSDED
Trigger: ATCTTCATCTGAAGGATTCTTCAGATGATTCATCTTCAGACTTCATCTGAAGGATTCAAACAATCTACTTGTGTGCCTTTGGTGGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR TCA 90 bp TTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTaGAACAATGTTCAGAGGTTATTAACTTGGAGCAAGTTGTACATG +
Preference number: 1 (lower is better)
Translates to: FGARTGARQQKRSNI*NNVQRLLTWSKLYM
Trigger: CATGTACAACTTGCTCCAAGTTAATAACCTCTGAACATTGTTTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 90 bp TCCCAATTCCTCTTTGAGCTCTCTTCTCTGGAAAAACAAATTATCTaGCATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTC +
Preference number: 1 (lower is better)
Translates to: SQFLFELSSLEKQII*HAIKTPKGNHCYHV
Trigger: GACATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGAGCTCAAAGAGGAATTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR CCA 90 bp TGCCTTCTAGGGGTTTTTAGGCTTTCCTCAATATCAGAAGATAGGTaGGCTCCTCAGTCAACTATTGATAAACATTTATTTAGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: CLLGVFRLSSISEDR*APQSTIDKHLFSRG
Trigger: ACCTCTGCTAAATAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCTAAAAACCCCTAGAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR TCA 90 bp CTTCCCATAAATCCTGCTTTCTCAGGCAGAATCATATACCATAACTaGAAGGAAATGGCTGCTGATTATCTGCTCATTATCTTCTTTCAT +
Preference number: 1 (lower is better)
Translates to: LPINPAFSGRIIYHN*KEMAADYLLIIFFH
Trigger: ATGAAAGAAGATAATGAGCAGATAATCAGCAGCCATTTCCTTTCAGTTATGGTATATGATTCTGCCTGAGAAAGCAGGATTTATGGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR TCA 90 bp TCACCAAGTGAAATCAAAGCCAAGTGTATTTGCACAACTCAAGAATaGTGTGAATGGATTAGAATCTCTCATAGTGTATACTTCGCCATT +
Preference number: 1 (lower is better)
Translates to: SPSEIKAKCICTTQE*CEWIRISHSVYFAI
Trigger: AATGGCGAAGTATACACTATGAGAGATTCTAATCCATTCACATCATTCTTGAGTTGTGCAAATACACTTGGCTTTGATTTCACTTGGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR-3UTR GCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATTCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTG +
Preference number: 2 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANSAERG*QVTLKL
Trigger: CAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGA...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTTCCAGTCAGAGGCTCTaGCTGTCCTTCATCATAGAT +
Preference number: 2 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQASSQRL*LSFIID
Trigger: ATCTATGATGAAGGACAGTCAGAGCCTCTGACTGGA...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTCATAGCCACGAAGCATaGTGTTTCCTAACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQAHSHEA*CFLTSK
Trigger: CTTTGAGGTTAGGAAACATCATGCTTCGTGGCTATG...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQAAFNNM*VLLFFQ
Trigger: CTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGC...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAATACAGACCGTTCCTATaGCTTCTTCCTCAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEYRPFL*LLPQGP
Trigger: GGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGTA...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR GCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACTCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 2 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHSISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGGTGGTGGTGGTGGTTaGCAGGACAGTTCTGTATCC +
Preference number: 2 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDGGGGG*QDSSVS
Trigger: GGATACAGAACTGTCCTGTCAACCACCACCACCACC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR GCA 90 bp TCATCAAGTACGGCCAATAGTGAAACTTCATACTCCGTACCGGGCTCCAGGCCTATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 2 (lower is better)
Translates to: SSSTANSETSYSVPGSRPITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...AGGCCTGGAGCCCGGTACGGAGTATGAAGTTTCACTATTGGCCGTACTTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 90 bp CTTGAAGTTGGGTCCCAGGTTAATCGAGCACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTTGGTGGACTTAAAGCCACAGCCATA +
Preference number: 2 (lower is better)
Translates to: LEVGSQVNRALLEPT*EILRFLGGLKATAI
Trigger: TATGGCTGTGGCTTTAAGTCCACCAAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAGTGCTCGATTAACCTGGGACCCAACTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGAATGTCTGGGGCCAATaGAACCAGAGTGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: WLSSDVITPSCLEQSGQENVWGQ*NQSGGF
Trigger: AAATCCTCCACTCTGGTTCCATTGGCCCCAGACATT...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCCACAGCTAAATGTCTaGGGCCAATGGAACCAGAGT +
Preference number: 2 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDPQLNV*GQWNQS
Trigger: ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGG...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTCACTCCATCATGTTTaGAGCAGAGTGGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHSLHHV*SRVGKR
Trigger: CCTCTTGCCCACTCTGCTCCAAACATGATGGAGTGA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTAAAAACTGTCAAGTGTaGTCCCGACAGCAGTCACCA +
Preference number: 2 (lower is better)
Translates to: ASSGVRLTENISFWRWQSKNCQV*SRQQSP
Trigger: TGGTGACTGCTGTCGGGACCACACTTGACAGTTTTT...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGTTTCTGATTCCCGTCTaGAAAACTGAAGTCACAGAT +
Preference number: 2 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPFLIPV*KTEVTD
Trigger: ATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAA...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTaGGCACACGATCATATACCTCTATCCAGGCTGACATGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: NFIMKLSHRGVWDKF*AHDHIPLSRLTWSS
Trigger: ACTGCTCCATGTCAGCCTGGATAGAGGTATATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR TCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCATACAGACCGTTCCTATaGCTTCTTCCTCAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPYRPFL*LLPQGP
Trigger: GGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGTA...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR GCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 2 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQADFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR GCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 2 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGTCCAGTCAGAGGCTCTaGCTGTCCTTCATCATAGAT +
Preference number: 2 (lower is better)
Translates to: VHGASFGFIKVTKKPVVESSQRL*LSFIID
Trigger: ATCTATGATGAAGGACAGTCAGAGCCTCTGACTGGA...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR GCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTTCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 2 (lower is better)
Translates to: ASSGVRLTENISFWRWQSSISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 90 bp TCTGGAGATGGCAGAGTCACTGAGAAAAGAGCAGTAAAGTTTGCATaGATCTCCGAAGACAGTCTTATTAGCTGTGTTAGTAACATCTGC +
Preference number: 2 (lower is better)
Translates to: SGDGRVTEKRAVKFA*ISEDSLISCVSNIC
Trigger: GCAGATGTTACTAACACAGCTAATAAGACTGTCTTCGGAGATCAATGCAAACTTTACTGCTCTTTTCTCAGTGACTCTGCCATCTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 90 bp ACATATATACAGACACAAGTGCATATGGCCTTTTATGACCCAACTTaGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: TYIQTQVHMAFYDPT*VLEQVQGSRREAIF
Trigger: AAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCTGTATATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEISKYC*AGTSSV
Trigger: CACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAAT...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGACATAGCCACGAAGCATaGTGTTTCCTAACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: STSTSLISVPSALLYTIRHSHEA*CFLTSK
Trigger: CTTTGAGGTTAGGAAACATCATGCTTCGTGGCTATG...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR TCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGGAGTTTCTAGTCAGTTaGATTTATACAGACCGTTCC +
Preference number: 2 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEEFLVS*IYTDRS
Trigger: GGAACGGTCTGTATAAATTCAACTGACTAGAAACTC...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR GCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 2 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTDFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTCTTTGCATCAGAGCTaGTGGAAAATCATTATTTCA +
Preference number: 2 (lower is better)
Translates to: RKLICMYKVIPVDKERQPSLHQS*WKIIIS
Trigger: TGAAATAATGATTTTCCACCAGCTCTGATGCAAAGA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR CAA 90 bp GCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTaGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: ADMEQSVSIKIDIYD*VKFRCYHSIMFGAE
Trigger: CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATATCTTTGCATCAGAGCTaGTGGAAAATCATTATTTCA +
Preference number: 2 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIISLHQS*WKIIIS
Trigger: TGAAATAATGATTTTCCACCAGCTCTGATGCAAAGA...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR CAA 90 bp GCAGAAGAGAAGCAATATTTGAAACAATGTTCAGAGGTTATTAACTaGGAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTC +
Preference number: 2 (lower is better)
Translates to: AEEKQYLKQCSEVIN*EQVVHGASFGFIKV
Trigger: GACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTCCAAGTTAATAACCTCTGAACATTGTTTCAAATATTGCTTCTCTTCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 72 bp AGAAGTCCATCACCAGGGAAGAGCAGGGAGGGGAGGTaGTCAGGGGAGGAAGGGAGAGTAGGGTGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: RSPSPGKSREGR*SGEEGRVGWSR
Trigger: CCTTGACCACCCTACTCTCCCTTCCTCCCCTGATCACCTCCCCTCCCTGCTCTTCCCTGGTGATGGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR TCA 72 bp ATACTCCGTACCGGGCTCCAGGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAGGACAACCTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: ILRTGLQAFNNM*VLLFFQDNLLS
Trigger: ACTGAGGAGGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGCCTGGAGCCCGGTACGGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAATTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCAC +
Preference number: 3 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEFLRVP*SCHVGH
Trigger: GTGACCTACATGACAGCTCAAGGGGACCCTGAGGAA...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR GCA 72 bp ATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTGTCTGTCGTCACCTCA +
Preference number: 3 (lower is better)
Translates to: INLCSPSSAERG*QVTLKLSVVTS
Trigger: TGAGGTGACGACAGACAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CCA 72 bp TTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTaGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGATGC +
Preference number: 3 (lower is better)
Translates to: FRCYHSIMFGAE*ARGLKVGRQGC
Trigger: GCATCCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CAA 90 bp TCATCAAGTACGGCCAATAGTGAAACTTCATACTCCGTACCGGGCTCCAGGCCTAGATTCTCAGGTTTCTaGGTGGACTTAAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: SSSTANSETSYSVPGSRPRFSGF*VDLKPQ
Trigger: CTGTGGCTTTAAGTCCACCAAGAAACCTGAGAATCT...AGGCCTGGAGCCCGGTACGGAGTATGAAGTTTCACTATTGGCCGTACTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQAGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR GCA 72 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTaGTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: HKCIWPFMTQLW*SNRCKAAEEKQ
Trigger: TTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CCA 72 bp AGACACAAGTGCATATGGCCTTTTATGACCCAACTTTaGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: RHKCIWPFMTQL*CSNRCKAAEEK
Trigger: CTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGAGATTCTCAGGTTTCTaGGTGGACTTAAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPRFSGF*VDLKPQ
Trigger: CTGTGGCTTTAAGTCCACCAAGAAACCTGAGAATCT...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGAAGCAGAGTGTCCATaGTTAGGGGCAGGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYEAECP*LGAGAW
Trigger: CCAAGCCCCTGCCCCTAACAATGGACACTCTGCTTC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR CCA 72 bp CTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTGGTAAAAACTCCAGTC +
Preference number: 3 (lower is better)
Translates to: LSVVTSSISKYC*AGTSSVVKTPV
Trigger: GACTGGAGTTTTTACCACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACATCACTCCATCATGTTaGGAGCAGAGTGGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHITPSC*EQSGQE
Trigger: CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGAT...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR-3UTR CAA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTATCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 3 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVSTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 72 bp TACATATATACAGACACAAGTGCATATGGCCTTTTATaGCCCAACTTTGGTGCTCGAACAGGTGCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: YIYTDTSAYGLL*PNFGARTGARQ
Trigger: CTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCTGTATATATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR GCA 72 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCGGTGGTAAAAACTCCA +
Preference number: 3 (lower is better)
Translates to: KLSVVTSSISKY*WAGTSSVVKTP
Trigger: TGGAGTTTTTACCACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGCTGGGTCAGGCCATCTaGATGAGCCTTAGACAAGTT +
Preference number: 3 (lower is better)
Translates to: SETQNKKQLITHPSHLSWLGQAI*MSLRQV
Trigger: AACTTGTCTAAGGCTCATCAAGATGGCCTGACCCAG...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR-3UTR CAA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGCTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGTCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 3 (lower is better)
Translates to: VHGASFGFIKVTKKPVVESTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 72 bp CGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTaGAACAATGTTCAGAGGTTATTAACTTGGAGCAAG +
Preference number: 3 (lower is better)
Translates to: RTGARQQKRSNI*NNVQRLLTWSK
Trigger: CTTGCTCCAAGTTAATAACCTCTGAACATTGTTTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCACCAAAGGGAAATCATaGCTACCATGTCATAGATTA +
Preference number: 3 (lower is better)
Translates to: RKLICMYKVIPVDKERQPTKGKS*LPCHRL
Trigger: TAATCTATGACATGGTAGCAATGATTTCCCTTTGGT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR-3UTR CAA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGCAGTAAAGTTTGCATaGATCTCCGAAGACAGTCTT +
Preference number: 3 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPAVKFA*ISEDSL
Trigger: AAGACTGTCTTCGGAGATCAATGCAAACTTTACTGC...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 72 bp GCTGTGTTAGTAACATCTGCAGAGTTTCTAGTCAGTTaGATTTATACAGACCGTTCCTATGACTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: AVLVTSAEFLVS*IYTDRSYDFFL
Trigger: GAGGAAGAAGTCATAGGAACGGTCTGTATAAATTCAACTGACTAGAAACTCTGCAGATGTTACTAACACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR-3UTR CAA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACAAGTGATCTCAGAGTaGGACAGATCAATTAAACAA +
Preference number: 3 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKQVISE*DRSIKQ
Trigger: TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR-3UTR CAA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: STSTSLISVPSALLYTIRLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR TCA 72 bp GCTGATTTTTGGATACACATGAAACCAGTTACCAAGTaGTCTCAGAGTTGGACAGATCAATTAAACAAGAGG +
Preference number: 3 (lower is better)
Translates to: ADFWIHMKPVTK*SQSWTDQLNKR
Trigger: CCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGTATCCAAAAATCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR TCA 72 bp AATCCTGCTTTCTCAGGCAGAATCATATACCATAACTaGAAGGAAATGGCTGCTGATTATCTGCTCATTATC +
Preference number: 3 (lower is better)
Translates to: NPAFSGRIIYHN*KEMAADYLLII
Trigger: GATAATGAGCAGATAATCAGCAGCCATTTCCTTTCAGTTATGGTATATGATTCTGCCTGAGAAAGCAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
3UTR-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTACCAAAGGGAAATCATaGCTACCATGTCATAGATTA +
Preference number: 3 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLTKGKS*LPCHRL
Trigger: TAATCTATGACATGGTAGCAATGATTTCCCTTTGGT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
3UTR GCA 72 bp AGGATCGACTTCAACCTCATTGATTTCAGTCCCATCTaGATTGTTATATACAATTCGATAACCATTGATCTG +
Preference number: 3 (lower is better)
Translates to: RIDFNLIDFSPI*IVIYNSITIDL
Trigger: CAGATCAATGGTTATCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CCA 72 bp GGGGTTTTTAGGCTTTCCTCAATATCAGAAGATAGGTaGGCTCCTCAGTCAACTATTGATAAACATTTATTT +
Preference number: 3 (lower is better)
Translates to: GVFRLSSISEDR*APQSTIDKHLF
Trigger: AAATAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCTAAAAACCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGCTGTCAGGGCGTCGCTaGAGCCTGAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGLSGRR*SLRPGR
Trigger: CCTCCCAGGCCTCAGGCTTCAGCGACGCCCTGACAG...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCCAGGGGGCCCAGGGCTaGCAGGCCGACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPQGAQG*QADSPL
Trigger: CAGGGGAGAGTCGGCCTGGCAGCCCTGGGCCCCCTG...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR GCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTCCAGCCCCCTGGAGCTaGCTCCGCCTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSPAPWS*LRLSSW
Trigger: CCAGCTGGAGAGGCGGAGGCAGCTCCAGGGGGCTGG...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGACCTGGTGGGCCTCTTaGTCCAGGAGAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGTWWAS*SRRARG
Trigger: CCCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGT...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGCAGGGGGCCCAGGGCTaGCAGGCCGACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEQGAQG*QADSPL
Trigger: CAGGGGAGAGTCGGCCTGGCAGCCCTGGGCCCCCTG...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCCACTTCCAGCCCCCTaGAGCTGCCTCCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNPLPAP*SCLRLS
Trigger: GGAGAGGCGGAGGCAGCTCCAGGGGGCTGGAAGTGG...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCGGTCCCTGGCACGCCTaGATTTCCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPGPWHA*ISGEAW
Trigger: CCAGGCTTCCCCGGAAATGCAGGCGTGCCAGGGACC...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCACCTGGTGGGCCTCTTaGTCCAGGAGAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPTWWAS*SRRARG
Trigger: CCCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGT...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGTTCCAGCCCAGGTTaGGAGCTCTCCGCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWGSSPG*ELSAPR
Trigger: CCTAGGCGCGGAGAGCTCCCAACCTGGGCTGGAACC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACACCCCGAGGGCCATCTaGTCCCTTTGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNTPRAI*SLWTRF
Trigger: GAACCGGGTCCAAAGGGACCAGATGGCCCTCGGGGT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGTGGACCCTGAGGTCCTaGCAGACCAATTTCACCCCG +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGWTLRS*QTNFTP
Trigger: CGGGGTGAAATTGGTCTGCCAGGACCTCAGGGTCCA...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACTGGCCCTGGTGGTCCTaGAGGTCCCGAGGATCCATC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNWPWWS*RSRGSI
Trigger: GATGGATCCTCGGGACCTCCAGGACCACCAGGGCCA...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACGCCTATTGGCCCTGGTaGTCCTGGAGGTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNAYWPW*SWRSRG
Trigger: TCCTCGGGACCTCCAGGACCACCAGGGCCAATAGGC...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCTTCTCCTGGGGTCCCTaGCACGCCTGCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPFSWGP*HACISG
Trigger: CCCGGAAATGCAGGCGTGCCAGGGACCCCAGGAGAA...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR TCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACGGTCCAGGTGGACCCTaGGGTCCTGGCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNGPGGP*GPGRPI
Trigger: AATTGGTCTGCCAGGACCTCAGGGTCCACCTGGACC...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGCCATCACGTCCTGGTaGACCAACGCCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWAITSW*TNASWD
Trigger: ATCCCAGGAGGCGTTGGTTCACCAGGACGTGATGGC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACCAGGAACCCCCAGATaGCCTGGTGGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKPGTPR*PGGPLG
Trigger: ACCAAGAGGCCCACCAGGTCATCTGGGGGTTCCTGG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATGCACTGCATCCCATTTaGCTCGCATGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANALHPI*LACCSQ
Trigger: CTGAGAACAGCATGCGAGTCAAATGGGATGCAGTGC...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACAGGGGGCCCAGGGCTaGCAGGCCGACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKQGAQG*QADSPL
Trigger: CAGGGGAGAGTCGGCCTGGCAGCCCTGGGCCCCCTG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGCGGCGCACCGCCCTTaGTCTCTTCCCTCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAAAHRP*SLPSEY
Trigger: ATACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACACCTTGCTGGCCCTTTaGTCCTCGGAGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNTLLAL*SSESWT
Trigger: GGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGCCTATTGGCCCTGGTaGTCCTGGAGGTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAAYWPW*SWRSRG
Trigger: TCCTCGGGACCTCCAGGACCACCAGGGCCAATAGGC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAAGCTTCCTGTGATCCCTaGGACTCCAGGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKASCDP*DSRGAR
Trigger: CCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGC...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGTCCCCAGGAGGCCCTTaGACAGTCCGGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWSPGGP*TVRMDE
Trigger: CTCATCCATCCGGACTGTCCAAGGGCCTCCTGGGGA...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCATTTCCGGGGAAGCCTaGTGTGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPISGEA*CAWGSL
Trigger: CAAGGACCCCCAGGCACACCAGGCTTCCCCGGAAAT...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCCCCCAGATGACCTGGTaGGCCTCTTGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPPQMTW*ASWSRR
Trigger: TCTCCTGGACCAAGAGGCCCACCAGGTCATCTGGGG...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
54% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTAACCCCCAGATGACCTaGTGGGCCTCTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSNPQMT*WASWSR
Trigger: CCTGGACCAAGAGGCCCACCAGGTCATCTGGGGGTT...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGTGGCCAGAAGGACCTTaGGGTCCAGGAACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWWPEGP*GPGTPR
Trigger: TCTGGGGGTTCCTGGACCCCAAGGTCCTTCTGGCCA...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCTGGCCAGAAGGACCTTaGGGTCCAGGAACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPWPEGP*GPGTPR
Trigger: TCTGGGGGTTCCTGGACCCCAAGGTCCTTCTGGCCA...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGCTCCGCCGCTAGTTaGTCCTTGGCGGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWASSAAS*SLAAHR
Trigger: GCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCT...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTAGCAGCCACCTGTGCTaGGCAAGGTTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASSHLC*ARFQPR
Trigger: CCTGGGCTGGAACCTTGCCCAGCACAGGTGGCTGCT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATCACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANHMSAV*FRGDLL
Trigger: CAGGAGATCGCCTCTGAACCAGACAGCACTCATGTG...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGCCATCACGTCCTGGTaGACCAACGCCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAAITSW*TNASWD
Trigger: ATCCCAGGAGGCGTTGGTTCACCAGGACGTGATGGC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATCTGTGGATGAGAAGTTaGCTGGGGCAGATGCTCTTA +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANLWMRS*LGQMLL
Trigger: TAAGAGCATCTGCCCCAGTCAACTTCTCATCCACAG...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR GCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACTGGGACTCCAGGGGTaGCAGGAATGCCTATTGGCC +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKLGLQG*QECLLA
Trigger: GGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGGTCCCTGGCACGCCTaGATTTCCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHGPWHA*ISGEAW
Trigger: CCAGGCTTCCCCGGAAATGCAGGCGTGCCAGGGACC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCAGGGGGCCCAGGGCTaGCAGGCCGACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVQGAQG*QADSPL
Trigger: CAGGGGAGAGTCGGCCTGGCAGCCCTGGGCCCCCTG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTGTAGCAGCCACCTGTaGTGGGCAAGGTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTACSSHL*WARFQP
Trigger: GGGCTGGAACCTTGCCCAGCACAGGTGGCTGCTACA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGCTGGGTGCAAGTACCTaGTTGGCTGGGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWLGAST*LAGKPG
Trigger: CCCTGGTTTCCCAGCCAACCAGGTACTTGCACCCAG...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTGGTCCTCGGAGTCCTaGACCACCTGGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHWSSES*TTWWAR
Trigger: GCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAAACCTTGCTGGCCCTTTaGTCCTCGGAGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKTLLAL*SSESWT
Trigger: GGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGT...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCCTTGAGGTCCAGGTaGACCCTGAGGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASLRSR*TLRSWQ
Trigger: CTGCCAGGACCTCAGGGTCCACCTGGACCTCAAGGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGCCAGGAATGCCTATTaGCCCTGGTGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAARNAY*PWWSWR
Trigger: CCTCCAGGACCACCAGGGCCAATAGGCATTCCTGGC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTCCAGGGACACCAGGTaGTCCCAGGGCGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHSRDTR*SQGALR
Trigger: CCGCAAGGCGCCCTGGGACCACCTGGTGTCCCTGGA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCCCCAGGAGGCCCTTaGACAGTCCGGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASPGGP*TVRMDE
Trigger: CTCATCCATCCGGACTGTCCAAGGGCCTCCTGGGGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAATGGCCAGAAGGACCTTaGGGTCCAGGAACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKWPEGP*GPGTPR
Trigger: TCTGGGGGTTCCTGGACCCCAAGGTCCTTCTGGCCA...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGGAAGGGAGAGTAGGGTaGTCAAGGAGAAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGEGRVG*SRRKMP
Trigger: GGGCATCTTTCTCCTTGACCACCCTACTCTCCCTTC...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR CAA 72 bp ACAGACCGTTCCTATGACTTCTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCACCCTAAACTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TDRSYDFFLRVP*SCHVGHPKLLH
Trigger: GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGATTCCGGGCATTCCTTaGATGGACAGACCACTTGGT +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGIPGIP*MDRPLG
Trigger: ACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAAT...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTAGCTGTTCGCATACTTaGCGCGCCACTGATCTCACC +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSSCSHT*RATDLT
Trigger: GGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGCT...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGCCATGTGACTCTGGATaGGCTGTTCGCATACTTGAC +
Preference number: 4 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGPCDSG*AVRILD
Trigger: GTCAAGTATGCGAACAGCTCATCCAGAGTCACATGG...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCAAGGCCGACTCTCCCCTaGAGGTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRDTEISCWVKSSGCLNPRPTLP*RSCWSR
Trigger: CCTGGACCAGCAGGACCTTCAGGGGAGAGTCGGCCT...TGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR TCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCAGGAGCGGAGACGCTaGCGCCTTCGCCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHQERRR*RLRHPC
Trigger: ACACGGATGGCGAAGGCGTCAGCGTCTCCGCTCCTG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGGACCCGGTTCACCTTaGTGGCCCTTTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHGPGSP*WPFGPR
Trigger: CCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTCCTCGTTCCCCCTTTaGTCCAGGGACACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQESSFPL*SRDTRW
Trigger: CCACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGCGGCGCACCGCCCTTaGTCTCTTCCCTCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAAAHRP*SLPSEY
Trigger: ATACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGTCAGAGGCGATCTCCTaGAGCTCATTCACATCCGCG +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPSEAIS*SSFTSA
Trigger: CGCGGATGTGAATGAGCTGCAGGAGATCGCCTCTGA...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTCAACCCTATAGGCTGTaGCATGGCGATGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSQPYRL*HGDVPA
Trigger: GGCAGGTACATCGCCATGCCACAGCCTATAGGGTTG...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTCCTTGAGGTCCAGGTaGACCCTGAGGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQESLRSR*TLRSWQ
Trigger: CTGCCAGGACCTCAGGGTCCACCTGGACCTCAAGGA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATTCTCCTGGGGTCCCTaGCACGCCTGCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAFSWGP*HACISG
Trigger: CCCGGAAATGCAGGCGTGCCAGGGACCCCAGGAGAA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTGGGCCTCTTGGACCTTaGGTTCCAACGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSGPLGP*VPTPGF
Trigger: AAATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCC...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCGGGCCTCTTGGACCTTaGGTTCCAACGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPGPLGP*VPTPGF
Trigger: AAATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCC...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCCGCTAGTTGGTCCTTaGCGGCGCACCGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDPLVGP*RRTALA
Trigger: AGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGG...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATAGCAGCCACCTGTGCTaGGCAAGGTTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHSSHLC*ARFQPR
Trigger: CCTGGGCTGGAACCTTGCCCAGCACAGGTGGCTGCT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTTACCACCACCTCGTCTaGTTTTCCACCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSYHHLV*FSTPGR
Trigger: CCTACCAGGGGTGGAAAACCAGACGAGGTGGTGGTA...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTTACTTGACGCGCCACTaGTCTCACCATGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSYLTRH*SHHGLR
Trigger: TCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTA...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GTCCTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCAGGAACCCCCAGATaGCCTGGTGGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VLRDTEISCWVKSSGCLNPGTPR*PGGPLG
Trigger: ACCAAGAGGCCCACCAGGTCATCTGGGGGTTCCTGG...ATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR TCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGGCGTCGCTGAAGCCTaGGGCCTGGGAGGCAAATAT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPGVAEA*GLGGKY
Trigger: ATATTTGCCTCCCAGGCCTCAGGCTTCAGCGACGCC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCACTGGGACTCCAGGGGTaGCAGGAATGCCTATTGGCC +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWALGLQG*QECLLA
Trigger: GGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAG...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTACCAGCCCCCTGGAGCTaGCTCCGCCTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLPAPWS*LRLSSW
Trigger: CCAGCTGGAGAGGCGGAGGCAGCTCCAGGGGGCTGG...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATTGTAGCAGCCACCTGTaGTGGGCAAGGTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHCSSHL*WARFQP
Trigger: GGGCTGGAACCTTGCCCAGCACAGGTGGCTGCTACA...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGGAGGGCAATCCTTCTaGGTGCAAGTACCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAGGQSF*VQVPGW
Trigger: CCAACCAGGTACTTGCACCCAGAAGGATTGCCCTCC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATACCTGGTGGGCCCGCTaGTCCCAGAGCCACTTCATT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHTWWAR*SQSHFI
Trigger: AATGAAGTGGCTCTGGGACCAGCGGGCCCACCAGGT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTCCTGGACCACCTGGTaGGCCCGCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYSWTTW*ARWSQS
Trigger: GCTCTGGGACCAGCGGGCCCACCAGGTGGTCCAGGA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTGGTCCTCGGAGTCCTaGACCACCTGGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVWSSES*TTWWAR
Trigger: GCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTCCAGGGACACCAGGTaGTCCCAGGGCGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWSRDTR*SQGALR
Trigger: CCGCAAGGCGCCCTGGGACCACCTGGTGTCCCTGGA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCTCACAATATCCAGGCTaGCCAGAAGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPSQYPG*PEGPWG
Trigger: ACCCCAAGGTCCTTCTGGCCAGCCTGGATATTGTGA...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAGCTCCGCCGCTAGTTaGTCCTTGGCGGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWSSAAS*SLAAHR
Trigger: GCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAGGTTCCAGCCCAGGTTaGGAGCTCTCCGCGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIGSSPG*ELSAPR
Trigger: CCTAGGCGCGGAGAGCTCCCAACCTGGGCTGGAACC...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACAAAAACTGTCAAGTGTaGTCCCGACAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHKNCQV*SRQQSP
Trigger: TGGTGACTGCTGTCGGGACCACACTTGACAGTTTTT...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGACACCCGCAAGTTCTaGGGCCCCGAGGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPDTRKF*GPEDGK
Trigger: CTTACCATCCTCGGGGCCCCAGAACTTGCGGGTGTC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGGGTGTAGCAGCCACTaGCCATTGCACCACCATCTT +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLGCSSH*PLHHHL
Trigger: AAGATGGTGGTGCAATGGCCAGTGGCTGCTACACCC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCTCACCATGGCTTaGGACTGCAGGTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHDLTMA*DCRSPR
Trigger: GCGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGGCTGGGAATCTGGTTaGGGATGGCAGTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAGWESG*GWQCTW
Trigger: CCAGGTACACTGCCATCCTCAACCAGATTCCCAGCC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTAGGCCGACTCTCCCCTaGAGGTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEARPTLP*RSCWSR
Trigger: CCTGGACCAGCAGGACCTTCAGGGGAGAGTCGGCCT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAGGCCGACTCTCCCCTaGAGGTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWRPTLP*RSCWSR
Trigger: CCTGGACCAGCAGGACCTTCAGGGGAGAGTCGGCCT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGGCGTCGCTGAAGCCTaGGGCCTGGGAGGCAAATAT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDGVAEA*GLGGKY
Trigger: ATATTTGCCTCCCAGGCCTCAGGCTTCAGCGACGCC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATACTGTCAGGGCGTCGCTaGAGCCTGAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPILSGRR*SLRPGR
Trigger: CCTCCCAGGCCTCAGGCTTCAGCGACGCCCTGACAG...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGCAGTATAGTTCAGCATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLQYSSA*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGTCATGCTGAACTATACTG...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR TCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTACAGACCGTTCCTATaGCTTCTTCCTCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSYRPFL*LLPQGP
Trigger: GGGACCCTGAGGAAGAAGTCATAGGAACGGTCTGTA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGGTCCCAGGGCGCCTTaGGGTCCCATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAGPRAP*GPMLPV
Trigger: CACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGGTCCCTGGCACGCCTaGATTTCCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAGPWHA*ISGEAW
Trigger: CCAGGCTTCCCCGGAAATGCAGGCGTGCCAGGGACC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGGTCCCTGGCACGCCTaGATTTCCGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLGPWHA*ISGEAW
Trigger: CCAGGCTTCCCCGGAAATGCAGGCGTGCCAGGGACC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TCATCAAGTACGGCCAATAGTGAAACTTCATACTCCGTACCGGGCTCCAGGCCTCATTGTACACATGAGTaGTGTCTGGTTCAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSSTANSETSYSVPGSRPHCTHE*CLVQRR
Trigger: TCGCCTCTGAACCAGACAGCACTCATGTGTACAATG...AGGCCTGGAGCCCGGTACGGAGTATGAAGTTTCACTATTGGCCGTACTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTCTCTCCACAACTGTGTaGATCAGATCGAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQALSTTV*IRSNSA
Trigger: TGCCGAATTCGATCTGATGCACACAGTTGTGGAGAG...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCGGTCAAGGAGAAAGATaGCCATCCATCCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPGQGER*PSILSH
Trigger: GTGTGAGAGGATGGATGGGCATCTTTCTCCTTGACC...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACATAGAAGCAATGCCTaGTTGTCCCTCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKHRSNA*LSLHPQ
Trigger: CTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCCACAAAGAAGACATaGCGTGCGCTGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASTKKT*RALGLL
Trigger: CAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGAGCAAATGGCTCCTGTaGAGTGTCAGGAAGAATCCG +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWSKWLL*SVRKNP
Trigger: CGGATTCTTCCTGACACTCCACAGGAGCCATTTGCT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTGGAATGGGGAAGGTCTaGGCAAGACTCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSGMGKV*ARLIIS
Trigger: AGAGATGATGAGTCTTGCCCAGACCTTCCCCATTCC...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATCCTGGACCACCTGGTaGGCCCGCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSWTTW*ARWSQS
Trigger: GCTCTGGGACCAGCGGGCCCACCAGGTGGTCCAGGA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGTCCTGGACCACCTaGTGGGCCCGCTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQESWTT*WARWSQ
Trigger: CTGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTGAGTCCTGGACCACCTaGTGGGCCCGCTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVESWTT*WARWSQ
Trigger: CTGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTC...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATGGTCCTCGGAGTCCTaGACCACCTGGTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREWSSES*TTWWAR
Trigger: GCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGCCATCTGGTCCCTTTaGACCCGGTTCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAAIWSL*TRFTLL
Trigger: CAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCAGAAGCCTGGTGTGCCTaGGGGTCCTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LRDTEISCWVKSSGCLNPEAWCA*GSLFTR
Trigger: CCTGGTGAACAAGGACCCCCAGGCACACCAGGCTTC...TGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTACCTGGTGGGCCTCTTaGTCCAGGAGAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLTWWAS*SRRARG
Trigger: CCCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCAAACCCCCAGATGACCTaGTGGGCCTCTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRDTEISCWVKSSGCLNPNPQMT*WASWSR
Trigger: CCTGGACCAAGAGGCCCACCAGGTCATCTGGGGGTT...TGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGACAGGGGTGAACTCTaGCTGATCTGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPDRGEL*LIWMGS
Trigger: GCTCCCCATCCAGATCAGCCAGAGTTCACCCCTGTC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTACCACTTCCAGCCCCCTaGAGCTGCCTCCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLPLPAP*SCLRLS
Trigger: GGAGAGGCGGAGGCAGCTCCAGGGGGCTGGAAGTGG...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTCCGCTAGTTGGTCCTTaGCGGCGCACCGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAPLVGP*RRTALA
Trigger: AGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGG...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGCACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLHMSAV*FRGDLL
Trigger: CAGGAGATCGCCTCTGAACCAGACAGCACTCATGTG...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACGGCCCAGTGATGGCATaGGCTGAGGCTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNGPVMA*AEALIS
Trigger: AGAAATTAAAGCCTCAGCCCATGCCATCACTGGGCC...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATTACCACCACCTCGTCTaGTTTTCCACCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HRLESTSICVALHQLRGDYHHLV*FSTPGR
Trigger: CCTACCAGGGGTGGAAAACCAGACGAGGTGGTGGTA...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACTTTATGACCCAACTTTaGTGCTCGAACAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHFMTQL*CSNRCK
Trigger: CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAA...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGCCCCTTCTTGTACCTaGCTCTGCAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEAPSCT*LCSEQG
Trigger: ACCTTGTTCACTGCAGAGTCAGGTACAAGAAGGGGC...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCCATGTGACTCTGGATaGGCTGTTCGCATACTTGAC +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAPCDSG*AVRILD
Trigger: GTCAAGTATGCGAACAGCTCATCCAGAGTCACATGG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTAGGCCGACTCTCCCCTaGAGGTCCTGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVRPTLP*RSCWSR
Trigger: CCTGGACCAGCAGGACCTTCAGGGGAGAGTCGGCCT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCCAGGAACCCCCAGATaGCCTGGTGGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYPGTPR*PGGPLG
Trigger: ACCAAGAGGCCCACCAGGTCATCTGGGGGTTCCTGG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTGGATACTCCAGTCCTTaGTCCTGCTTCTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSGYSSP*SCFWFE
Trigger: TTCAAACCAGAAGCAGGATCAAGGACTGGAGTATCC...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACAGTGATGGCATGGGCTaGGGCTTTAATTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNSDGMG*GFNFSV
Trigger: GACAGAGAAATTAAAGCCTCAGCCCATGCCATCACT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATGAGTTTCTAGTCAGTTaGATTTATACAGACCGTTCC +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANEFLVS*IYTDRS
Trigger: GGAACGGTCTGTATAAATTCAACTGACTAGAAACTC...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCTTGGGTTCCATCTGTaGCAATCTTGTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTALGFHL*QSCSGL
Trigger: GAGCCCTGAACAAGATTGGCACAGATGGAACCCAAG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACAACTCCGAGTAATCTaGATCGGCCACACCAATTGC +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKQLRVI*IGHTNC
Trigger: GCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGGTCCCAGGGCGCCTTaGGGTCCCATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQGPRAP*GPMLPV
Trigger: CACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGGTCCCAGGGCGCCTTaGGGTCCCATGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEGPRAP*GPMLPV
Trigger: CACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQESAERG*QVTLKL
Trigger: CAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAATCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFESAERG*QVTLKL
Trigger: CAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGA...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTATGACCCAACTTTGGTaGTCGAACAGGTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSMTQLW*SNRCKA
Trigger: TGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCAT...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTTCCCTCCACCCACAGTaGATTCTTGCTTTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSSLHPQ*ILAFAY
Trigger: ATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGA...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGCATAGAAGCAATGCCTaGTTGTCCCTCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEHRSNA*LSLHPQ
Trigger: CTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATG...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTCCTGGACCACCTGGTaGGCCCGCTGGTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFSWTTW*ARWSQS
Trigger: GCTCTGGGACCAGCGGGCCCACCAGGTGGTCCAGGA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTGAGTCCTGGACCACCTaGTGGGCCCGCTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSESWTT*WARWSQ
Trigger: CTGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTC...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGACCCCGAGGGCCATCTaGTCCCTTTGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWTPRAI*SLWTRF
Trigger: GAACCGGGTCCAAAGGGACCAGATGGCCCTCGGGGT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGATACCCTGTGGACCTaGAAGGCCAGTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTADTLWT*KASISF
Trigger: AAAGGAGATACTGGCCTTCCAGGTCCACAGGGTATC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCCCGGAAGGCCCCTCTaGCCTGGTGAGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMPGRPL*PGEPSR
Trigger: ACGTGATGGCTCACCAGGCCAGAGGGGCCTTCCGGG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTACCCGGAAGGCCCCTCTaGCCTGGTGAGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLPGRPL*PGEPSR
Trigger: ACGTGATGGCTCACCAGGCCAGAGGGGCCTTCCGGG...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCCCGGAAGGCCCCTCTaGCCTGGTGAGCCATCACGT +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVPGRPL*PGEPSR
Trigger: ACGTGATGGCTCACCAGGCCAGAGGGGCCTTCCGGG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGCTTCCTGTGATCCCTaGGACTCCAGGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLASCDP*DSRGAR
Trigger: CCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTTCCAGGGACACCAGGTaGTCCCAGGGCGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSSRDTR*SQGALR
Trigger: CCGCAAGGCGCCCTGGGACCACCTGGTGTCCCTGGA...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATCGGATGGATGAGGAGTaGCTGGGAATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHRMDEE*LGIWLR
Trigger: CCTCAACCAGATTCCCAGCCACTCCTCATCCATCCG...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTTCTCCTGGGGTCCCTaGCACGCCTGCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWFSWGP*HACISG
Trigger: CCCGGAAATGCAGGCGTGCCAGGGACCCCAGGAGAA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAACCTGGTGGGCCTCTTaGTCCAGGAGAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPITWWAS*SRRARG
Trigger: CCCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACCCCAGATGACCTGGTaGGCCTCTTGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIPQMTW*ASWSRR
Trigger: TCTCCTGGACCAAGAGGCCCACCAGGTCATCTGGGG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTTTTCCGCTTTTTACATaGGGTGTAGCAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSFPLFT*GVAATC
Trigger: ACAGGTGGCTGCTACACCCCATGTAAAAAGCGGAAA...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGTACCACCACCTCGTCTaGTTTTCCACCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVYHHLV*FSTPGR
Trigger: CCTACCAGGGGTGGAAAACCAGACGAGGTGGTGGTA...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGAAAAACTGTCAAGTGTaGTCCCGACAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWKNCQV*SRQQSP
Trigger: TGGTGACTGCTGTCGGGACCACACTTGACAGTTTTT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATTTTCTGATTCCCGTCTaGAAAACTGAAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANFLIPV*KTEVTD
Trigger: ATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAA...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATTTTCACCGGGGAAGATaGGGGGTCCCACGTAATGCG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDFHRGR*GVPRNA
Trigger: CGCATTACGTGGGACCCCCCATCTTCCCCGGTGAAA...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTGGGTGTAGCAGCCACTaGCCATTGCACCACCATCTT +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSGCSSH*PLHHHL
Trigger: AAGATGGTGGTGCAATGGCCAGTGGCTGCTACACCC...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 72 bp GGGTCCCAGGTTAATCGAGCACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTTGGTGGACTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSQVNRALLEPT*EILRFLGGLKA
Trigger: GGCTTTAAGTCCACCAAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAGTGCTCGATTAACCTGGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 72 bp CAGACACAAGTGCATATGGCCTTTTATGACCCAACTTaGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QTQVHMAFYDPT*VLEQVQGSRRE
Trigger: TTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGATCTCACCATGGCTTaGGACTGCAGGTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVDLTMA*DCRSPR
Trigger: GCGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACCAGGAACCCCCAGATaGCCTGGTGGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREPGTPR*PGGPLG
Trigger: ACCAAGAGGCCCACCAGGTCATCTGGGGGTTCCTGG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGGGGTGAACTCTGGCTaGTCTGGATGGGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLGVNSG*SGWGAL
Trigger: GAGAGCTCCCCATCCAGATCAGCCAGAGTTCACCCC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCTTCAAATTTCTCCTaGGGCTATCAGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASSNFS*GYQTPG
Trigger: CCCTGGAGTCTGATAGCCTCAGGAGAAATTTGAAGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTTTTCACTTCTTCTGGTaGAGATGGTCTACTCCCATT +
Preference number: 4 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQAFHFFW*RWSTPI
Trigger: AATGGGAGTAGACCATCTTCACCAGAAGAAGTGAAA...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSATLYT*VLSGSE
Trigger: CTCTGAACCAGACAGCACTCATGTGTACAATGTTGC...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGAGTGATGGCATGGGCTaGGGCTTTAATTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKSDGMG*GFNFSV
Trigger: GACAGAGAAATTAAAGCCTCAGCCCATGCCATCACT...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGCACTGCATCCCATTTaGCTCGCATGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAALHPI*LACCSQ
Trigger: CTGAGAACAGCATGCGAGTCAAATGGGATGCAGTGC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGCACTGCATCCCATTTaGCTCGCATGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVALHPI*LACCSQ
Trigger: CTGAGAACAGCATGCGAGTCAAATGGGATGCAGTGC...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAATCCCGTCTGGAAAACTaGAGTCACAGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFESRLEN*SHRCGR
Trigger: CCTACCACATCTGTGACTTCAGTTTTCCAGACGGGA...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCAGGAGCGGAGACGCTaGCGCCTTCGCCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFQERRR*RLRHPC
Trigger: ACACGGATGGCGAAGGCGTCAGCGTCTCCGCTCCTG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTATCCTGCAAGATCAATaGCATCCTTGTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSILQDQ*HPCVPL
Trigger: CAGTGGTACACAAGGATGGCATTGATCTTGCAGGAT...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAGGACCCGGTTCACCTTaGTGGCCCTTTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLGPGSP*WPFGPR
Trigger: CCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCC...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACAGTGTGGGCATAGATTaGAAAGACTGCTATCTGATA +
Preference number: 4 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHSVGID*KDCYLI
Trigger: TATCAGATAGCAGTCTTTGCAATCTATGCCCACACT...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTATCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVSAERG*QVTLKL
Trigger: CAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGA...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGGTCACCCTAAACTGCTaGACATCGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKVTLNC*TSLSEM
Trigger: CATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGAC...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGGTCAAGGAGAAAGATaGCCATCCATCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAGQGER*PSILCG
Trigger: CCCACACAGGATGGATGGGCATCTTTCTCCTTGACC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCGACACAGAGATATCCTaGTGGGTAAAAAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPDTEIS*WVKSSG
Trigger: TCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTC...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR GCA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATATGACCCAACTTTGGTaGTCGAACAGGTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HRLESTSICVALHQLRGDMTQLW*SNRCKA
Trigger: TGCCTTGCACCTGTTCGAGCACCAAAGTTGGGTCAT...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATATATACAGACACAAGTaGATATGGCCTTTTATGACC +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANIYRHK*IWPFMT
Trigger: GGTCATAAAAGGCCATATGCACTTGTGTCTGTATAT...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAATCCCTCCACCCACAGTaGATTCTTGCTTTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKSLHPQ*ILAFAY
Trigger: ATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGA...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTAACCACGATAACCTTTaGGATGCCCCTTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTANHDNL*DAPSCT
Trigger: GGTACAAGAAGGGGCATCCCAAAGGTTATCGTGGTT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGGAGGGCAATCCTTCTaGGTGCAAGTACCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHGGQSF*VQVPGW
Trigger: CCAACCAGGTACTTGCACCCAGAAGGATTGCCCTCC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTACCTTGCTGGCCCTTTaGTCCTCGGAGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLTLLAL*SSESWT
Trigger: GGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTCCTGGGATACCCTGTaGACCTGGAAGGCCAGTATC +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHSWDTL*TWKASI
Trigger: GATACTGGCCTTCCAGGTCCACAGGGTATCCCAGGA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATGGCCCTGGTGGTCCTaGAGGTCCCGAGGATCCATC +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQWPWWS*RSRGSI
Trigger: GATGGATCCTCGGGACCTCCAGGACCACCAGGGCCA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGCCTATTGGCCCTGGTaGTCCTGGAGGTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIAYWPW*SWRSRG
Trigger: TCCTCGGGACCTCCAGGACCACCAGGGCCAATAGGC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGCTTCCTGTGATCCCTaGGACTCCAGGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEASCDP*DSRGAR
Trigger: CCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGAGTGGCTGGGAATCTaGTTGAGGATGGCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPEWLGI*LRMAVY
Trigger: GTACACTGCCATCCTCAACCAGATTCCCAGCCACTC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGAGTGGCTGGGAATCTaGTTGAGGATGGCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHEWLGI*LRMAVY
Trigger: GTACACTGCCATCCTCAACCAGATTCCCAGCCACTC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGAAGCCTGGTGTGCCTaGGGGTCCTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLEAWCA*GSLFTR
Trigger: CCTGGTGAACAAGGACCCCCAGGCACACCAGGCTTC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGAAGCCTGGTGTGCCTaGGGGTCCTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYEAWCA*GSLFTR
Trigger: CCTGGTGAACAAGGACCCCCAGGCACACCAGGCTTC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTATTTCCGGGGAAGCCTaGTGTGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAISGEA*CAWGSL
Trigger: CAAGGACCCCCAGGCACACCAGGCTTCCCCGGAAAT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATTCTCCTGGGGTCCCTaGCACGCCTGCATTTCCGGG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQFSWGP*HACISG
Trigger: CCCGGAAATGCAGGCGTGCCAGGGACCCCAGGAGAA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCCCCAGATGACCTGGTaGGCCTCTTGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYPQMTW*ASWSRR
Trigger: TCTCCTGGACCAAGAGGCCCACCAGGTCATCTGGGG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTCACAATATCCAGGCTaGCCAGAAGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPSQYPG*PEGPWG
Trigger: ACCCCAAGGTCCTTCTGGCCAGCCTGGATATTGTGA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCGTTTTTCACCCCTATaGCAAACAGTTCTACACCAG +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPRFSPL*QTVLHQ
Trigger: CTGGTGTAGAACTGTTTGCCATAGGGGTGAAAAACG...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPHMSAV*FRGDLL
Trigger: CAGGAGATCGCCTCTGAACCAGACAGCACTCATGTG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCACACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAHMSAV*FRGDLL
Trigger: CAGGAGATCGCCTCTGAACCAGACAGCACTCATGTG...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWISKYC*AGTSSV
Trigger: CACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAAT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGAAAAACTGTCAAGTGTaGTCCCGACAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKKNCQV*SRQQSP
Trigger: TGGTGACTGCTGTCGGGACCACACTTGACAGTTTTT...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATGGAGCAAGTTGTACATaGAGCAAGTTTTGGATTTAT +
Preference number: 4 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANGASCT*SKFWIY
Trigger: ATAAATCCAAAACTTGCTCCATGTACAACTTGCTCC...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGGGTCCAGGTGGACCCTaGGGTCCTGGCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMGPGGP*GPGRPI
Trigger: AATTGGTCTGCCAGGACCTCAGGGTCCACCTGGACC...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAGGTCCAGGTGGACCCTaGGGTCCTGGCAGACCAATT +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLGPGGP*GPGRPI
Trigger: AATTGGTCTGCCAGGACCTCAGGGTCCACCTGGACC...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGCCATCACGTCCTGGTaGACCAACGCCTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQAITSW*TNASWD
Trigger: ATCCCAGGAGGCGTTGGTTCACCAGGACGTGATGGC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGGCTGGGAATCTGGTTaGGGATGGCAGTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAGWESG*GWQCTW
Trigger: CCAGGTACACTGCCATCCTCAACCAGATTCCCAGCC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGGGGTGAACTCTGGCTaGTCTGGATGGGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREGVNSG*SGWGAL
Trigger: GAGAGCTCCCCATCCAGATCAGCCAGAGTTCACCCC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAATCTTCCAATACTCCATaGACCATCGACCAGGATTAC +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKSSNTP*TIDQDY
Trigger: GTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGA...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTCTTCCAATACTCCATaGACCATCGACCAGGATTAC +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSSSNTP*TIDQDY
Trigger: GTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATGGATACTCCAGTCCTTaGTCCTGCTTCTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: HRLESTSICVALHQLRGDGYSSP*SCFWFE
Trigger: TTCAAACCAGAAGCAGGATCAAGGACTGGAGTATCC...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLAFNNM*VLLFFQ
Trigger: CTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGCTACAACTAGGTTTCTaGTTCCCGTCTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKLQLGF*FPSGKL
Trigger: CAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAG...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCTTACATACTTCTTTTaGTGGTGGAATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNLTYFF*WWNGWR
Trigger: CCTCCAACCATTCCACCAGCAAAAGAAGTATGTAAG...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACAGTGAACTGAACCATTaGAACTTGGGTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNSELNH*NLGSIC
Trigger: ACAGATGGAACCCAAGTTGCAATGGTTCAGTTCACT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATCAACTCCGAGTAATCTaGATCGGCCACACCAATTGC +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHQLRVI*IGHTNC
Trigger: GCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTG...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATAAAGAAGACATGGCGTaGGCTGGGCTTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHKEDMA*AGLTAN
Trigger: ATTGGCAGTAAGCCCAGCGCACGCCATGTCTTCTTT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGGACCCGGTTCACCTTaGTGGCCCTTTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFGPGSP*WPFGPR
Trigger: CCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCTGGGACTCCAGGGGTaGCAGGAATGCCTATTGGCC +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMLGLQG*QECLLA
Trigger: GGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTCCTCGTTCCCCCTTTaGTCCAGGGACACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMSSFPL*SRDTRW
Trigger: CCACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATCCTCGTTCCCCCTTTaGTCCAGGGACACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSSFPL*SRDTRW
Trigger: CCACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTCTAAATGCATTCAAGTaGCATTCTATTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQALNAFK*HSILGS
Trigger: TGACCCCAGAATAGAATGGCACTTGAATGCATTTAG...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACAATTTTCATCTCCAATaGTCCAGGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNNFHLQ*SRIHPP
Trigger: TGGTGGATGGATCCTGGAGCATTGGAGATGAAAATT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACAACCCTATAGGCTGTaGCATGGCGATGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKQPYRL*HGDVPA
Trigger: GGCAGGTACATCGCCATGCCACAGCCTATAGGGTTG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACTGCTTTTGCCTATCCTaGAGGGATTCTATAACAACC +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNCFCLS*RDSITT
Trigger: GGTTGTTATAGAATCCCTCCAGGATAGGCAAAAGCA...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTGCTGGTGGAATGGTTaGAGGAAAAGTTGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPCWWNG*RKSWWS
Trigger: CGACCACCAACTTTTCCTCCAACCATTCCACCAGCA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATGCTGGTGGAATGGTTaGAGGAAAAGTTGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWACWWNG*RKSWWS
Trigger: CGACCACCAACTTTTCCTCCAACCATTCCACCAGCA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGAACCACGATAACCTTTaGGATGCCCCTTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQENHDNL*DAPSCT
Trigger: GGTACAAGAAGGGGCATCCCAAAGGTTATCGTGGTT...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATTCCACAAAGAAGACATaGCGTGCGCTGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDSTKKT*RALGLL
Trigger: CAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGA...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAGTGCAAGTACCTGGTTaGCTGGGAAACCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKVQVPG*LGNQGI
Trigger: GATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCAC...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCAGCAAATGGCTCCTGTaGAGTGTCAGGAAGAATCCG +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPSKWLL*SVRKNP
Trigger: CGGATTCTTCCTGACACTCCACAGGAGCCATTTGCT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAACCTGGTGGGCCCGCTaGTCCCAGAGCCACTTCATT +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPITWWAR*SQSHFI
Trigger: AATGAAGTGGCTCTGGGACCAGCGGGCCCACCAGGT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGCCATCTGGTCCCTTTaGACCCGGTTCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVAIWSL*TRFTLL
Trigger: CAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTACCCCGAGGGCCATCTaGTCCCTTTGGACCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSTPRAI*SLWTRF
Trigger: GAACCGGGTCCAAAGGGACCAGATGGCCCTCGGGGT...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTGGACCCTGAGGTCCTaGCAGACCAATTTCACCCCG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVWTLRS*QTNFTP
Trigger: CGGGGTGAAATTGGTCTGCCAGGACCTCAGGGTCCA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAATCCTGGGATACCCTGTaGACCTGGAAGGCCAGTATC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKSWDTL*TWKASI
Trigger: GATACTGGCCTTCCAGGTCCACAGGGTATCCCAGGA...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTTGGCCCTGGTGGTCCTaGAGGTCCCGAGGATCCATC +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSWPWWS*RSRGSI
Trigger: GATGGATCCTCGGGACCTCCAGGACCACCAGGGCCA...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGCCAGGAATGCCTATTaGCCCTGGTGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIARNAY*PWWSWR
Trigger: CCTCCAGGACCACCAGGGCCAATAGGCATTCCTGGC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTGCCAGGAATGCCTATTaGCCCTGGTGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVARNAY*PWWSWR
Trigger: CCTCCAGGACCACCAGGGCCAATAGGCATTCCTGGC...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACTTGGACAGTCCGGATaGATGAGGAGTGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIILGQSG*MRSGWE
Trigger: TTCCCAGCCACTCCTCATCCATCCGGACTGTCCAAG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTCCCCAGGAGGCCCTTaGACAGTCCGGATGGATGAG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMSPGGP*TVRMDE
Trigger: CTCATCCATCCGGACTGTCCAAGGGCCTCCTGGGGA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATTTCCGGGGAAGCCTaGTGTGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREISGEA*CAWGSL
Trigger: CAAGGACCCCCAGGCACACCAGGCTTCCCCGGAAAT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTATTTCCGGGGAAGCCTaGTGTGCCTGGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVISGEA*CAWGSL
Trigger: CAAGGACCCCCAGGCACACCAGGCTTCCCCGGAAAT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAAACCCCCAGATGACCTaGTGGGCCTCTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRENPQMT*WASWSR
Trigger: CCTGGACCAAGAGGCCCACCAGGTCATCTGGGGGTT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATGGCCAGAAGGACCTTaGGGTCCAGGAACCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIWPEGP*GPGTPR
Trigger: TCTGGGGGTTCCTGGACCCCAAGGTCCTTCTGGCCA...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGATTTCCTCCTTTATATaGGAGGTTTCGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPISSFI*EVSDSF
Trigger: GAAGCTGTCCGAAACCTCCCATATAAAGGAGGAAAT...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCGTTTTTCACCCCTATaGCAAACAGTTCTACACCAG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTARFSPL*QTVLHQ
Trigger: CTGGTGTAGAACTGTTTGCCATAGGGGTGAAAAACG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTCGTTTTTCACCCCTATaGCAAACAGTTCTACACCAG +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSRFSPL*QTVLHQ
Trigger: CTGGTGTAGAACTGTTTGCCATAGGGGTGAAAAACG...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGGCCCAGTGATGGCATaGGCTGAGGCTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPGPVMA*AEALIS
Trigger: AGAAATTAAAGCCTCAGCCCATGCCATCACTGGGCC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAGGCCCAGTGATGGCATaGGCTGAGGCTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVGPVMA*AEALIS
Trigger: AGAAATTAAAGCCTCAGCCCATGCCATCACTGGGCC...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTGACACCCGCAAGTTCTaGGGCCCCGAGGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVDTRKF*GPEDGK
Trigger: CTTACCATCCTCGGGGCCCCAGAACTTGCGGGTGTC...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTTTCACCGGGGAAGATaGGGGGTCCCACGTAATGCG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAFHRGR*GVPRNA
Trigger: CGCATTACGTGGGACCCCCCATCTTCCCCGGTGAAA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTCCTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATGAAGGGAGAGTAGGGTaGTCAAGGAGAAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: VLRDTEISCWVKSSGCLNEGRVG*SRRKMP
Trigger: GGGCATCTTTCTCCTTGACCACCCTACTCTCCCTTC...ATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGTTTCCGCTTTTTACATaGGGTGTAGCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVFPLFT*GVAATG
Trigger: GCCAGTGGCTGCTACACCCCATGTAAAAAGCGGAAA...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTTTTCCGCTTTTTACATaGGGTGTAGCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSFPLFT*GVAATG
Trigger: GCCAGTGGCTGCTACACCCCATGTAAAAAGCGGAAA...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACGGAGCAAGTTGTACATaGAGCAAGTTTTGGATTTAT +
Preference number: 4 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHGASCT*SKFWIY
Trigger: ATAAATCCAAAACTTGCTCCATGTACAACTTGCTCC...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGTTTATGACCCAACTTTaGTGCTCGAACAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLFMTQL*CSNRCK
Trigger: CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAA...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 72 bp ATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTaGGCACACGATCATATACCTCTATCCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: MKLSHRGVWDKF*AHDHIPLSRLT
Trigger: TGTCAGCCTGGATAGAGGTATATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAGCCCCTTCTTGTACCTaGCTCTGCAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIAPSCT*LCSEQG
Trigger: ACCTTGTTCACTGCAGAGTCAGGTACAAGAAGGGGC...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATTCCGGAATAGAAAACTaGTTGTGTAGTCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHSGIEN*LCSRRA
Trigger: TGCCCTCCGACTACACAATCAGTTTTCTATTCCGGA...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTCTGTATTGGCCCATaGTGTGGAGCAAACAATATC +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEVCIGP*CGANNI
Trigger: GATATTGTTTGCTCCACATCATGGGCCAATACAGAC...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGATCTCACCATGGCTTaGGACTGCAGGTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFDLTMA*DCRSPR
Trigger: GCGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAGCTGTTCGCATACTTaGCGCGCCACTGATCTCACC +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWSCSHT*RATDLT
Trigger: GGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGCT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGTGTACCTGGCCATGTaGCTCTGGATGAGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVVYLAM*LWMSCS
Trigger: CGAACAGCTCATCCAGAGTCACATGGCCAGGTACAC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGTGTACCTGGCCATGTaGCTCTGGATGAGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAVYLAM*LWMSCS
Trigger: CGAACAGCTCATCCAGAGTCACATGGCCAGGTACAC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGTGTACCTGGCCATGTaGCTCTGGATGAGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYVYLAM*LWMSCS
Trigger: CGAACAGCTCATCCAGAGTCACATGGCCAGGTACAC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGTTAGTTTTTCCACCTaGAGTTGGAGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLVSFST*SWSHKK
Trigger: CTTCTTGTGACTCCAACTTCAGGTGGAAAAACTAAC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAAATTCTGAATTGGCCTTaGGCTGGCTTGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKILNWP*AGLLSL
Trigger: TAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAAT...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGGCAATTGCTGGAGTTTaGCAGACAAATTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPAIAGV*QTNFTS
Trigger: AGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGC...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTGGGCTGGAACTTCCAATTCGTGTCTTCTCTaGGCCCACATCGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: KLSVVTSSISKYCWAGTSNSCLL*AHIECC
Trigger: ACAGCATTCGATGTGGGCTCAGAGAAGACACGAATT...GGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAAATTCGTGTCTTCTCTaGGCCCACATCGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVNSCLL*AHIECC
Trigger: ACAGCATTCGATGTGGGCTCAGAGAAGACACGAATT...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAGGATACTCCAGTCCTTaGTCCTGCTTCTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVGYSSP*SCFWFE
Trigger: TTCAAACCAGAAGCAGGATCAAGGACTGGAGTATCC...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVATLYT*VLSGSE
Trigger: CTCTGAACCAGACAGCACTCATGTGTACAATGTTGC...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATTCCAGTCAGAGGCTCTaGCTGTCCTTCATCATAGAT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHSSQRL*LSFIID
Trigger: ATCTATGATGAAGGACAGTCAGAGCCTCTGACTGGA...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTGGGCTGGAACTTCCTCCAGTCAGAGGCTCTaGCTGTCCTTCATCATAGAT +
Preference number: 4 (lower is better)
Translates to: KLSVVTSSISKYCWAGTSSSQRL*LSFIID
Trigger: ATCTATGATGAAGGACAGTCAGAGCCTCTGACTGGA...GGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGCTACAACTAGGTTTCTaGTTCCCGTCTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQELQLGF*FPSGKL
Trigger: CAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAG...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTTGGACCAGGAACACTaGCAGGTTTGTAGACAATTC +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQELDQEH*QVCRQF
Trigger: GAATTGTCTACAAACCTGTCAGTGTTCCTGGTCCAA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTAATATCTGTGGATaGGAAGTTGACTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLINICG*EVDWGR
Trigger: TCTGCCCCAGTCAACTTCTCATCCACAGATATTAAT...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR TCA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATCATAGCCACGAAGCATaGTGTTTCCTAACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HRLESTSICVALHQLRGDHSHEA*CFLTSK
Trigger: CTTTGAGGTTAGGAAACATCATGCTTCGTGGCTATG...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAGCATATGGCCTTTTATaGCCCAACTTTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVAYGLL*PNFGAR
Trigger: TCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGC...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCCCACAGTGGATTCTTaGTTTTGCCTATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHPTVDS*FCLSWR
Trigger: CCTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCTTACATACTTCTTTTaGTGGTGGAATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTALTYFF*WWNGWR
Trigger: CCTCCAACCATTCCACCAGCAAAAGAAGTATGTAAG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGCCTTCTCACCCACTTaGTTGCAGTCAATAACCACT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPAFSPT*LQSITT
Trigger: AGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACAATAATTGCTTTAGTTaGAGTGTTCTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHNNCFS*SVLQIQ
Trigger: CTGAATCTGCAGAACACTGCAACTAAAGCAATTATT...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCTTGAGCTGGCTTaGTTTCTTTATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWGLELA*FLYLYC
Trigger: ACAATAAAGATAAAGAAAGCAAGCCAGCTCAAGGCC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGTCACCACTATACTGTaGAAGACCAATTCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLVTTIL*KTNSCL
Trigger: AAGACACGAATTGGTCTTGCACAGTATAGTGGTGAC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCAGAGGCGATCTCCTaGAGCTCATTCACATCCGCG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVSEAIS*SSFTSA
Trigger: CGCGGATGTGAATGAGCTGCAGGAGATCGCCTCTGA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCATCAGAGGCGATCTCCTaGAGCTCATTCACATCCGCG +
Preference number: 4 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPSEAIS*SSFTSA
Trigger: CGCGGATGTGAATGAGCTGCAGGAGATCGCCTCTGA...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCACTCTCCACAACTGTGTaGATCAGATCGAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWALSTTV*IRSNSA
Trigger: TGCCGAATTCGATCTGATGCACACAGTTGTGGAGAG...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTTCAGTCCCCTCTCCACAACTGTGTaGATCAGATCGAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: LQREGSNRIDFNLIDFSPLSTTV*IRSNSA
Trigger: TGCCGAATTCGATCTGATGCACACAGTTGTGGAGAG...GGGACTGAAATCAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSSISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCCTTCCCATAAATCCTaGTTTCTCAGGCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAPSHKS*FLRQNH
Trigger: ATGATTCTGCCTGAGAAAGCAGGATTTATGGGAAGG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTCCCTCCACCCACAGTaGATTCTTGCTTTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPSLHPQ*ILAFAY
Trigger: ATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGTACTTCTTTTGCTGGTaGAATGGTTGGAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWYFFCW*NGWRKS
Trigger: ACTTTTCCTCCAACCATTCCACCAGCAAAAGAAGTA...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACACATACTTCTTTTGCTaGTGGAATGGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNTYFFC*WNGWRK
Trigger: TTTCCTCCAACCATTCCACCAGCAAAAGAAGTATGT...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATATACCAGGTCAGCCTTaGCCGCCTTACATACTTCTT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHIPGQP*PPYILL
Trigger: AAGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTAT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAAGTACCTGGTTGGCTaGGAAACCAGGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAKYLVG*ETRASL
Trigger: TAAAGATGCCCTGGTTTCCCAGCCAACCAGGTACTT...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGTGCAAGTACCTGGTTaGCTGGGAAACCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYVQVPG*LGNQGI
Trigger: GATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCAC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAACTGGGTGCAAGTACCTaGTTGGCTGGGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQLGAST*LAGKPG
Trigger: CCCTGGTTTCCCAGCCAACCAGGTACTTGCACCCAG...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTCAAACATCTGTAACTaGAACGGTGCAGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASNICN*NGAEFP
Trigger: TGGAAACTCTGCACCGTTCCAGTTACAGATGTTTGA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTACCTGGTGGGCCCGCTaGTCCCAGAGCCACTTCATT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFTWWAR*SQSHFI
Trigger: AATGAAGTGGCTCTGGGACCAGCGGGCCCACCAGGT...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTGGACCCTGAGGTCCTaGCAGACCAATTTCACCCCG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMWTLRS*QTNFTP
Trigger: CGGGGTGAAATTGGTCTGCCAGGACCTCAGGGTCCA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTCCTTGAGGTCCAGGTaGACCCTGAGGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFSLRSR*TLRSWQ
Trigger: CTGCCAGGACCTCAGGGTCCACCTGGACCTCAAGGA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCTCTCCTTTTTCTCCTaGCATTCCGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDLSFFS*HSGHSL
Trigger: CAAGGAATGCCCGGAATGCCAGGAGAAAAAGGAGAG...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGATACCCTGTGGACCTaGAAGGCCAGTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDDTLWT*KASISF
Trigger: AAAGGAGATACTGGCCTTCCAGGTCCACAGGGTATC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAGAGTGGCTGGGAATCTaGTTGAGGATGGCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKEWLGI*LRMAVY
Trigger: GTACACTGCCATCCTCAACCAGATTCCCAGCCACTC...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCCCCAGATGACCTGGTaGGCCTCTTGGTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSPQMTW*ASWSRR
Trigger: TCTCCTGGACCAAGAGGCCCACCAGGTCATCTGGGG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTAACCCCCAGATGACCTaGTGGGCCTCTTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSNPQMT*WASWSR
Trigger: CCTGGACCAAGAGGCCCACCAGGTCATCTGGGGGTT...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGACAGGGGTGAACTCTaGCTGATCTGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREDRGEL*LIWMGS
Trigger: GCTCCCCATCCAGATCAGCCAGAGTTCACCCCTGTC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGCTTCCAGCTCATCTTaGACAGGGGTGAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAASSSS*TGVNSG
Trigger: GCCAGAGTTCACCCCTGTCCAAGATGAGCTGGAAGC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTATATCTTAACCTTGTaGGTGGAGCCACTTGACCTT +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSYILTL*VEPLDL
Trigger: AAGGTCAAGTGGCTCCACCCACAAGGTTAAGATATA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGCGTTTTTCACCCCTATaGCAAACAGTTCTACACCAG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQERFSPL*QTVLHQ
Trigger: CTGGTGTAGAACTGTTTGCCATAGGGGTGAAAAACG...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTACCACCACCTCGTCTaGTTTTCCACCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLYHHLV*FSTPGR
Trigger: CCTACCAGGGGTGGAAAACCAGACGAGGTGGTGGTA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCTGTGTATTCTGTATTaGGCAACAACCCACTCAATT +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPLCILY*ATTHSI
Trigger: AATTGAGTGGGTTGTTGCCCAATACAGAATACACAG...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEISKYC*AGTSSV
Trigger: CACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAAT...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTGGAAACTTAAAATCATaGCCGATGGGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSGNLKS*PMGKQS
Trigger: TGACTGTTTCCCCATCGGCCATGATTTTAAGTTTCC...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR CCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAATAGTTCAGCATGACTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVIVQHD*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAGTCATGCTGAACTAT...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR TCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGGATCATCAGTGAACTaGACCATTGCAACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHGSSVN*TIATWV
Trigger: AACCCAAGTTGCAATGGTTCAGTTCACTGATGATCC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAAGCTGTTCGCATACTTaGCGCGCCACTGATCTCACC +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPISCSHT*RATDLT
Trigger: GGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGCT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACCATGTGACTCTGGATaGGCTGTTCGCATACTTGAC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKPCDSG*AVRILD
Trigger: GTCAAGTATGCGAACAGCTCATCCAGAGTCACATGG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGGCTGGGAATCTGGTTaGGGATGGCAGTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFGWESG*GWQCTW
Trigger: CCAGGTACACTGCCATCCTCAACCAGATTCCCAGCC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTCATCTTGGACAGGGGTaGACTCTGGCTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAHLGQG*TLADLD
Trigger: ATCCAGATCAGCCAGAGTTCACCCCTGTCCAAGATG...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCATCTTGGACAGGGGTaGACTCTGGCTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVHLGQG*TLADLD
Trigger: ATCCAGATCAGCCAGAGTTCACCCCTGTCCAAGATG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAATTCTGAATTGGCCTTaGGCTGGCTTGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEILNWP*AGLLSL
Trigger: TAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAAT...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATCTTCCAATACTCCATaGACCATCGACCAGGATTAC +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWASSNTP*TIDQDY
Trigger: GTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSAFNNM*VLLFFQ
Trigger: CTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGC...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTACTACAACTAGGTTTCTaGTTCCCGTCTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVLQLGF*FPSGKL
Trigger: CAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAG...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGGTGGTGGTGGTGGTTaGCAGGACAGTTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEGGGGG*QDSSVS
Trigger: GGATACAGAACTGTCCTGTCAACCACCACCACCACC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGCTTCTAGTTGTAAATaGTCCCATCCCTACTTTCTA +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAASSCK*SHPYFL
Trigger: TAGAAAGTAGGGATGGGATCATTTACAACTAGAAGC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGACCTTGGACAATGGTaGAGAAATAAACAATTGCCA +
Preference number: 4 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLDLGQW*RNKQLP
Trigger: TGGCAATTGTTTATTTCTGCACCATTGTCCAAGGTC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTCAGAGGCGATCTCCTaGAGCTCATTCACATCCGCG +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAESEAIS*SSFTSA
Trigger: CGCGGATGTGAATGAGCTGCAGGAGATCGCCTCTGA...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQESISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGTCACCCTAAACTGCTaGACATCGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDVTLNC*TSLSEM
Trigger: CATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGAC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACAACCCTATAGGCTGTaGCATGGCGATGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREQPYRL*HGDVPA
Trigger: GGCAGGTACATCGCCATGCCACAGCCTATAGGGTTG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTACTTCTTTTGCTGGTaGAATGGTTGGAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAYFFCW*NGWRKS
Trigger: ACTTTTCCTCCAACCATTCCACCAGCAAAAGAAGTA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTCCACAAAGAAGACATaGCGTGCGCTGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWSTKKT*RALGLL
Trigger: CAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGTGCAAGTACCTGGTTaGCTGGGAAACCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIVQVPG*LGNQGI
Trigger: GATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCAC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCTGGGTGCAAGTACCTaGTTGGCTGGGAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSLGAST*LAGKPG
Trigger: CCCTGGTTTCCCAGCCAACCAGGTACTTGCACCCAG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCTCCCAAAGAGCAAATaGCTCCTGTGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYLPKSK*LLWSVR
Trigger: CCTGACACTCCACAGGAGCCATTTGCTCTTTGGGAG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACCAGAGCCACTTCATTaGTTTCAGAACAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIPEPLH*FQNRSR
Trigger: CCTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGCCATCTGGTCCCTTTaGACCCGGTTCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFAIWSL*TRFTLL
Trigger: CAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATAATGGACAGACCACTTaGTCCTTGAGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYNGQTT*SLRSRW
Trigger: CCACCTGGACCTCAAGGACCAAGTGGTCTGTCCATT...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACTCTCCTTTTTCTCCTaGCATTCCGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIILSFFS*HSGHSL
Trigger: CAAGGAATGCCCGGAATGCCAGGAGAAAAAGGAGAG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACTCTCCTTTTTCTCCTaGCATTCCGGGCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKLSFFS*HSGHSL
Trigger: CAAGGAATGCCCGGAATGCCAGGAGAAAAAGGAGAG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATCCTGGGATACCCTGTaGACCTGGAAGGCCAGTATC +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSWDTL*TWKASI
Trigger: GATACTGGCCTTCCAGGTCCACAGGGTATCCCAGGA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCCACTGATCTCACCATaGCTTGAGACTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVPLISP*LETAGH
Trigger: GTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCCACTGATCTCACCATaGCTTGAGACTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYPLISP*LETAGH
Trigger: GTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACGGATGGATGAGGAGTaGCTGGGAATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRERMDEE*LGIWLR
Trigger: CCTCAACCAGATTCCCAGCCACTCCTCATCCATCCG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATACGGATGGATGAGGAGTaGCTGGGAATCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIRMDEE*LGIWLR
Trigger: CCTCAACCAGATTCCCAGCCACTCCTCATCCATCCG...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCTTGGACAGTCCGGATaGATGAGGAGTGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVLGQSG*MRSGWE
Trigger: TTCCCAGCCACTCCTCATCCATCCGGACTGTCCAAG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGGGCCTCTTGGACCTTaGGTTCCAACGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREGPLGP*VPTPGF
Trigger: AAATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTCACAATATCCAGGCTaGCCAGAAGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYSQYPG*PEGPWG
Trigger: ACCCCAAGGTCCTTCTGGCCAGCCTGGATATTGTGA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAGAACTCTGGCTGATCTaGATGGGGAGCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLELWLI*MGSSHT
Trigger: GGTGTGAGAGCTCCCCATCCAGATCAGCCAGAGTTC...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGGCCCCACAGTTCCATaGCTTCCAGCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQGPTVP*LPAHLG
Trigger: TCCAAGATGAGCTGGAAGCCATGGAACTGTGGGGCC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGGCCCCACAGTTCCATaGCTTCCAGCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIGPTVP*LPAHLG
Trigger: TCCAAGATGAGCTGGAAGCCATGGAACTGTGGGGCC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGGGCCCAGTGATGGCATaGGCTGAGGCTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEGPVMA*AEALIS
Trigger: AGAAATTAAAGCCTCAGCCCATGCCATCACTGGGCC...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TCATCAAGTACGGCCAATAGTGAAACTTCATACTCCGTACCGGGCTCCAGGCCTAATTCAATATCTGTGTaGGTCTCTCCAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: SSSTANSETSYSVPGSRPNSISV*VSPIFI
Trigger: GATGAAAATTGGAGAGACCCACACAGATATTGAATT...AGGCCTGGAGCCCGGTACGGAGTATGAAGTTTCACTATTGGCCGTACTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCCAATGGAACCAGAGTaGAGGATTTCCACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHPMEPE*RISTSV
Trigger: CACTGAAGTGGAAATCCTCCACTCTGGTTCCATTGG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGCTTGGTGGTGGTGGTaGTTGACAGGACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYAWWWW*LTGQFC
Trigger: ACAGAACTGTCCTGTCAACCACCACCACCACCAAGC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAAATATCAGAAGATAGGTaGGCTCCTCAGTCAACTATT +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKISEDR*APQSTI
Trigger: AATAGTTGACTGAGGAGCCCACCTATCTTCTGATAT...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGGCCCCTTCTTGTACCTaGCTCTGCAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMAPSCT*LCSEQG
Trigger: ACCTTGTTCACTGCAGAGTCAGGTACAAGAAGGGGC...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCACTGGACAGGTTGCTaGTGCTGTTTCGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVHWTGC*CCFADK
Trigger: TTTGTCTGCGAAACAGCATCAGCAACCTGTCCAGTG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGCACTGGACAGGTTGCTaGTGCTGTTTCGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWHWTGC*CCFADK
Trigger: TTTGTCTGCGAAACAGCATCAGCAACCTGTCCAGTG...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATATCCGGAATAGAAAACTaGTTGTGTAGTCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIISGIEN*LCSRRA
Trigger: TGCCCTCCGACTACACAATCAGTTTTCTATTCCGGA...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATACTTGACGCGCCACTaGTCTCACCATGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREYLTRH*SHHGLR
Trigger: TCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTACTTGACGCGCCACTaGTCTCACCATGGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMYLTRH*SHHGLR
Trigger: TCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAGTTAGTTTTTCCACCTaGAGTTGGAGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVVSFST*SWSHKK
Trigger: CTTCTTGTGACTCCAACTTCAGGTGGAAAAACTAAC...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATTTCACTTCTTCTGGTaGAGATGGTCTACTCCCATT +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAFHFFW*RWSTPI
Trigger: AATGGGAGTAGACCATCTTCACCAGAAGAAGTGAAA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTTCAGTCCCTTTCACTTCTTCTGGTaGAGATGGTCTACTCCCATT +
Preference number: 4 (lower is better)
Translates to: LQREGSNRIDFNLIDFSPFHFFW*RWSTPI
Trigger: AATGGGAGTAGACCATCTTCACCAGAAGAAGTGAAA...GGGACTGAAATCAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAAGCAAAGACTGCTATCTaGTATTCAGTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKAKTAI*YSVKDI
Trigger: GATGTCTTTAACTGAATATCAGATAGCAGTCTTTGC...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGGCAAAGACTGCTATCTaGTATTCAGTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKAKTAI*YSVKDI
Trigger: GATGTCTTTAACTGAATATCAGATAGCAGTCTTTGC...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGCACTGCATCCCATTTaGCTCGCATGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQALHPI*LACCSQ
Trigger: CTGAGAACAGCATGCGAGTCAAATGGGATGCAGTGC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDAFNNM*VLLFFQ
Trigger: CTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTCCCGTCTGGAAAACTaGAGTCACAGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLSRLEN*SHRCGR
Trigger: CCTACCACATCTGTGACTTCAGTTTTCCAGACGGGA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTAAGAGTTCTCTTAGGTaGCTCTGGGTCAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAKSSLR*LWVRPS
Trigger: AGATGGCCTGACCCAGAGTCACCTAAGAGAACTCTT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTAGAATAAGAAGCAACTaGTTACACACCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTARIRSN*LHTLVI
Trigger: AATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTCCCACAGTGGATTCTTaGTTTTGCCTATCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAPTVDS*FCLSWR
Trigger: CCTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGG...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCTTGGGTTCCATCTGTaGCAATCTTGTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVLGFHL*QSCSGL
Trigger: GAGCCCTGAACAAGATTGGCACAGATGGAACCCAAG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCACCAATTGCAAAAATaGTATAGCCATCTAATTGCA +
Preference number: 4 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNHQLQK*YSHLIA
Trigger: TGCAATTAGATGGCTATAGCATTTTTGCAATTGGTG...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCATCGGCCACACCAATTaGAAAAATGCTATAGCCATC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPIGHTN*KNAIAI
Trigger: GATGGCTATAGCATTTTTGCAATTGGTGTGGCCGAT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTCAACTCCGAGTAATCTaGATCGGCCACACCAATTGC +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAQLRVI*IGHTNC
Trigger: GCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTG...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTAAAGAAGACATGGCGTaGGCTGGGCTTACTGCCAAT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAKEDMA*AGLTAN
Trigger: ATTGGCAGTAAGCCCAGCGCACGCCATGTCTTCTTT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTTGCGAAAACTTATCTaGATGTACAAAGTAATCCCC +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTALRKLI*MYKVIP
Trigger: GGGGATTACTTTGTACATGCAGATAAGTTTTCGCAA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAACCAGTACCGCATCTTaGGCTGGAAAATCTTCATTT +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVTSTAS*AGKSSF
Trigger: AAATGAAGATTTTCCAGCGCAAGATGCGGTACTGGT...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAGGCCTTGAGCTGGCTTaGTTTCTTTATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEGLELA*FLYLYC
Trigger: ACAATAAAGATAAAGAAAGCAAGCCAGCTCAAGGCC...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTACAATGTCAGCAATTaGTGGAGTTTGACAGACAAA +
Preference number: 4 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAYNVSN*WSLTDK
Trigger: TTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGTACAATGTCAGCAATTaGTGGAGTTTGACAGACAAA +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKYNVSN*WSLTDK
Trigger: TTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTA...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGCTAAATGCATTCAAGTaGCATTCTATTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQELNAFK*HSILGS
Trigger: TGACCCCAGAATAGAATGGCACTTGAATGCATTTAG...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAAGTGTGGGCATAGATTaGAAAGACTGCTATCTGATA +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFESVGID*KDCYLI
Trigger: TATCAGATAGCAGTCTTTGCAATCTATGCCCACACT...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTATCAATTTCTAAGTATTaGTGGGCTGGAACTTCCTCG +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVSISKY*WAGTSS
Trigger: CGAGGAAGTTCCAGCCCAGCAATACTTAGAAATTGA...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAACAGAGGTCATGCATTTaGAGGGTCTTTGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQQRSCI*RVFAAC
Trigger: GCAGGCAGCAAAGACCCTGCAAATGCATGACCTCTG...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTCAACATGTTTGGCTTaGAGATTGGTAACACCCAAG +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPSTCLA*RLVTPK
Trigger: CTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATCAACATGTTTGGCTTaGAGATTGGTAACACCCAAG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWASTCLA*RLVTPK
Trigger: CTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATACATAGAAGCAATGCCTaGTTGTCCCTCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIHRSNA*LSLHPQ
Trigger: CTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATG...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTGCTGGTGGAATGGTTaGAGGAAAAGTTGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEACWWNG*RKSWWS
Trigger: CGACCACCAACTTTTCCTCCAACCATTCCACCAGCA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGATGGAGTTGGTAACATaGAAACACATTGAAGGTACC +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEMELVT*KHIEGT
Trigger: GGTACCTTCAATGTGTTTCCATGTTACCAACTCCAT...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTGGAGGGCAATCCTTCTaGGTGCAAGTACCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSGGQSF*VQVPGW
Trigger: CCAACCAGGTACTTGCACCCAGAAGGATTGCCCTCC...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCTCCCAAAGAGCAAATaGCTCCTGTGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMLPKSK*LLWSVR
Trigger: CCTGACACTCCACAGGAGCCATTTGCTCTTTGGGAG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGAATGGACAGACCACTTaGTCCTTGAGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMNGQTT*SLRSRW
Trigger: CCACCTGGACCTCAAGGACCAAGTGGTCTGTCCATT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGATACCCTGTGGACCTaGAAGGCCAGTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLDTLWT*KASISF
Trigger: AAAGGAGATACTGGCCTTCCAGGTCCACAGGGTATC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACCACTGATCTCACCATaGCTTGAGACTGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREPLISP*LETAGH
Trigger: GTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCTTGGACAGTCCGGATaGATGAGGAGTGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSLGQSG*MRSGWE
Trigger: TTCCCAGCCACTCCTCATCCATCCGGACTGTCCAAG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGGGCCTCTTGGACCTTaGGTTCCAACGCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFGPLGP*VPTPGF
Trigger: AAATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATCACAATATCCAGGCTaGCCAGAAGGACCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRESQYPG*PEGPWG
Trigger: ACCCCAAGGTCCTTCTGGCCAGCCTGGATATTGTGA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGAACTCTGGCTGATCTaGATGGGGAGCTCTCACACC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFELWLI*MGSSHT
Trigger: GGTGTGAGAGCTCCCCATCCAGATCAGCCAGAGTTC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTGCTTCCAGCTCATCTTaGACAGGGGTGAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSASSSS*TGVNSG
Trigger: GCCAGAGTTCACCCCTGTCCAAGATGAGCTGGAAGC...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTATATCTTAACCTTGTaGGTGGAGCCACTTGACCTT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPYILTL*VEPLDL
Trigger: AAGGTCAAGTGGCTCCACCCACAAGGTTAAGATATA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTTATATCTTAACCTTGTaGGTGGAGCCACTTGACCTT +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSYILTL*VEPLDL
Trigger: AAGGTCAAGTGGCTCCACCCACAAGGTTAAGATATA...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGTTAAAATGCCAATTTTaGATACTCCAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWLKCQF*ILQSLI
Trigger: GATCAAGGACTGGAGTATCCAAAATTGGCATTTTAA...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGAGTTTTTCAACACTGTaGAAGATACAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPSFSTL*KIQFHL
Trigger: TAGATGGAACTGTATCTTCCACAGTGTTGAAAAACT...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTAATTCAATATCTGTGTaGGTCTCTCCAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSNSISV*VSPIFI
Trigger: GATGAAAATTGGAGAGACCCACACAGATATTGAATT...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAACTGTGTATTCTGTATTaGGCAACAACCCACTCAATT +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFELCILY*ATTHSI
Trigger: AATTGAGTGGGTTGTTGCCCAATACAGAATACACAG...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAATTTCTGATTCCCGTCTaGAAAACTGAAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: PTLVLEQVQGSRREAIFEFLIPV*KTEVTD
Trigger: ATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAA...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCTATCCAGGCTGACATaGAGCAGTCAGTGTCTATTA +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDLSRLT*SSQCLL
Trigger: TAATAGACACTGACTGCTCCATGTCAGCCTGGATAG...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAGGATCATCAGTGAACTaGACCATTGCAACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIGSSVN*TIATWV
Trigger: AACCCAAGTTGCAATGGTTCAGTTCACTGATGATCC...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATATACCTGACTCTGCAGTaGACAAGGTATCTCGAACAT +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIYLTLQ*TRYLEH
Trigger: ATGTTCGAGATACCTTGTTCACTGCAGAGTCAGGTA...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCACTGGACAGGTTGCTaGTGCTGTTTCGCAGACAAA +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVHWTGC*CCFADK
Trigger: TTTGTCTGCGAAACAGCATCAGCAACCTGTCCAGTG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATTCCGGGCATTCCTTaGATGGACAGACCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREIPGIP*MDRPLG
Trigger: ACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAAT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAATTCCGGGCATTCCTTaGATGGACAGACCACTTGGT +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQIPGIP*MDRPLG
Trigger: ACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAAT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTTCAAATTTCTCCTaGGGCTATCAGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVSSNFS*GYQTPG
Trigger: CCCTGGAGTCTGATAGCCTCAGGAGAAATTTGAAGA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGTTAGTTTTTCCACCTaGAGTTGGAGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHVSFST*SWSHKK
Trigger: CTTCTTGTGACTCCAACTTCAGGTGGAAAAACTAAC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGCAATTGCTGGAGTTTaGCAGACAAATTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVAIAGV*QTNFTS
Trigger: AGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGC...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATAATTCGTGTCTTCTCTaGGCCCACATCGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYNSCLL*AHIECC
Trigger: ACAGCATTCGATGTGGGCTCAGAGAAGACACGAATT...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVATLYT*VLSGSE
Trigger: CTCTGAACCAGACAGCACTCATGTGTACAATGTTGC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAAGTGATGGCATGGGCTaGGGCTTTAATTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPSDGMG*GFNFSV
Trigger: GACAGAGAAATTAAAGCCTCAGCCCATGCCATCACT...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTCCAGTCAGAGGCTCTaGCTGTCCTTCATCATAGAT +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWSSQRL*LSFIID
Trigger: ATCTATGATGAAGGACAGTCAGAGCCTCTGACTGGA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTCCCGTCTGGAAAACTaGAGTCACAGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAESRLEN*SHRCGR
Trigger: CCTACCACATCTGTGACTTCAGTTTTCCAGACGGGA...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAGAAAGAGAACCTGGTaGTCAGACAGACACCATCCT +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWRKRTW*SDRHHP
Trigger: AGGATGGTGTCTGTCTGATCACCAGGTTCTCTTTCT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAGAGTTTCTAGTCAGTTaGATTTATACAGACCGTTCC +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTEFLVS*IYTDRS
Trigger: GGAACGGTCTGTATAAATTCAACTGACTAGAAACTC...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCTTGGGTTCCATCTGTaGCAATCTTGTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVLGFHL*QSCSGL
Trigger: GAGCCCTGAACAAGATTGGCACAGATGGAACCCAAG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACATCGGCCACACCAATTaGAAAAATGCTATAGCCATC +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHIGHTN*KNAIAI
Trigger: GATGGCTATAGCATTTTTGCAATTGGTGTGGCCGAT...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGCCTTCTCACCCACTTaGTTGCAGTCAATAACCACT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAAFSPT*LQSITT
Trigger: AGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATACCAGTACCGCATCTTaGGCTGGAAAATCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDTSTAS*AGKSSF
Trigger: AAATGAAGATTTTCCAGCGCAAGATGCGGTACTGGT...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAGACCTTGGACAATGGTaGAGAAATAAACAATTGCCA +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVDLGQW*RNKQLP
Trigger: TGGCAATTGTTTATTTCTGCACCATTGTCCAAGGTC...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATTAGTTGCAGTGTTCTaGAGATTCAGCTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWALVAVF*RFSWLV
Trigger: AACTAACCAGCTGAATCTGCAGAACACTGCAACTAA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACATTAGTTGCAGTGTTCTaGAGATTCAGCTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTLVAVF*RFSWLV
Trigger: AACTAACCAGCTGAATCTGCAGAACACTGCAACTAA...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTATTAGTTGCAGTGTTCTaGAGATTCAGCTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVLVAVF*RFSWLV
Trigger: AACTAACCAGCTGAATCTGCAGAACACTGCAACTAA...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATAAGGCCTTGAATAATTaGTTTAGTTGCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HRLESTSICVALHQLRGDKALNN*FSCSVL
Trigger: CAGAACACTGCAACTAAAGCAATTATTCAAGGCCTT...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGCTAAATGCATTCAAGTaGCATTCTATTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVLNAFK*HSILGS
Trigger: TGACCCCAGAATAGAATGGCACTTGAATGCATTTAG...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCATTGTACACATGAGTaGTGTCTGGTTCAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYHCTHE*CLVQRR
Trigger: TCGCCTCTGAACCAGACAGCACTCATGTGTACAATG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTCTCTCCACAACTGTGTaGATCAGATCGAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLLSTTV*IRSNSA
Trigger: TGCCGAATTCGATCTGATGCACACAGTTGTGGAGAG...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTCAGCTGAGAGGGGATaGCAGGTCACCCTAAAACTG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFSAERG*QVTLKL
Trigger: CAGTTTTAGGGTGACCTGGCATCCCCTCTCAGCTGA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAAGTGGGCACACAAGCTaGTCATTTCAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKSGHTS*SFQHVW
Trigger: CCAAACATGTTGAAATGACCAGCTTGTGTGCCCACT...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTATACCAGGTCAGCCTTaGCCGCCTTACATACTTCTT +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLIPGQP*PPYILL
Trigger: AAGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTAT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCATGGAGTTGGTAACATaGAAACACATTGAAGGTACC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPMELVT*KHIEGT
Trigger: GGTACCTTCAATGTGTTTCCATGTTACCAACTCCAT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTAAGTACCTGGTTGGCTaGGAAACCAGGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLKYLVG*ETRASL
Trigger: TAAAGATGCCCTGGTTTCCCAGCCAACCAGGTACTT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAAGCAAATGGCTCCTGTaGAGTGTCAGGAAGAATCCG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPISKWLL*SVRKNP
Trigger: CGGATTCTTCCTGACACTCCACAGGAGCCATTTGCT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCTCCCAAAGAGCAAATaGCTCCTGTGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSLPKSK*LLWSVR
Trigger: CCTGACACTCCACAGGAGCCATTTGCTCTTTGGGAG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGGAATGGGGAAGGTCTaGGCAAGACTCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIGMGKV*ARLIIS
Trigger: AGAGATGATGAGTCTTGCCCAGACCTTCCCCATTCC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATACCAGAGCCACTTCATTaGTTTCAGAACAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIPEPLH*FQNRSR
Trigger: CCTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGG...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCCAGAGCCACTTCATTaGTTTCAGAACAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVPEPLH*FQNRSR
Trigger: CCTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTAATGGACAGACCACTTaGTCCTTGAGGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFNGQTT*SLRSRW
Trigger: CCACCTGGACCTCAAGGACCAAGTGGTCTGTCCATT...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTACGGGCATTCCTTGAATaGACAGACCACTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLRAFLE*TDHLVL
Trigger: AAGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCG...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGCGGGCATTCCTTGAATaGACAGACCACTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAERAFLE*TDHLVL
Trigger: AAGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCG...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTTTCCGCTTTTTACATaGGGTGTAGCAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVFPLFT*GVAATC
Trigger: ACAGGTGGCTGCTACACCCCATGTAAAAAGCGGAAA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATTATATCTTAACCTTGTaGGTGGAGCCACTTGACCTT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDYILTL*VEPLDL
Trigger: AAGGTCAAGTGGCTCCACCCACAAGGTTAAGATATA...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGTTCTGCAGATTCAGCTaGTTAGTTTTTCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVFCRFS*LVFPPE
Trigger: TTCAGGTGGAAAAACTAACCAGCTGAATCTGCAGAA...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTTTCTGCAGATTCAGCTaGTTAGTTTTTCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSFCRFS*LVFPPE
Trigger: TTCAGGTGGAAAAACTAACCAGCTGAATCTGCAGAA...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTTAAAATGCCAATTTTaGATACTCCAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSLKCQF*ILQSLI
Trigger: GATCAAGGACTGGAGTATCCAAAATTGGCATTTTAA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGGGAATAATGTCATCTTaGGATTTTCCATCTGTGATT +
Preference number: 4 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKGIMSS*DFPSVI
Trigger: AATCACAGATGGAAAATCCCAAGATGACATTATTCC...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATTTTCTGATTCCCGTCTaGAAAACTGAAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHFLIPV*KTEVTD
Trigger: ATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAA...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAAGAAGGAGGTTGTTCTaGCTTCCAGGCACCATAACC +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLRRRLF*LPGTIT
Trigger: GGTTATGGTGCCTGGAAGCCAGAACAACCTCCTTCT...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGAGAAGGAGGTTGTTCTaGCTTCCAGGCACCATAACC +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAERRRLF*LPGTIT
Trigger: GGTTATGGTGCCTGGAAGCCAGAACAACCTCCTTCT...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGCCACAGCTAAATGTCTaGGGCCAATGGAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEPQLNV*GQWNQS
Trigger: ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGG...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GTCCTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATACAGAGATATCCTGCTaGGTAAAAAGCAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VLRDTEISCWVKSSGCLNTEISC*VKSSGC
Trigger: ACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT...ATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CCA 90 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTGGGCTGGAACTTCCAGACACAAGTGCATATaGCCTTTTATGACCCAACTT +
Preference number: 4 (lower is better)
Translates to: KLSVVTSSISKYCWAGTSRHKCI*PFMTQL
Trigger: AAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCT...GGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
3UTR CAA 72 bp GGCAGAGTCACTGAGAAAAGAGCAGTAAAGTTTGCATaGATCTCCGAAGACAGTCTTATTAGCTGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: GRVTEKRAVKFA*ISEDSLISCVS
Trigger: ACTAACACAGCTAATAAGACTGTCTTCGGAGATCAATGCAAACTTTACTGCTCTTTTCTCAGTGACTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGTTCACATCATCTTGTaGTCTTCCATCAGTTATAAC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPVHIIL*SSISYN
Trigger: GTTATAACTGATGGAAGATCACAAGATGATGTGAAC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGTTCACATCATCTTGTaGTCTTCCATCAGTTATAAC +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAVHIIL*SSISYN
Trigger: GTTATAACTGATGGAAGATCACAAGATGATGTGAAC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGCAATTGCTGGAGTTTaGCAGACAAATTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDAIAGV*QTNFTS
Trigger: AGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGAATTCGTGTCTTCTCTaGGCCCACATCGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMNSCLL*AHIECC
Trigger: ACAGCATTCGATGTGGGCTCAGAGAAGACACGAATT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAGGATACTCCAGTCCTTaGTCCTGCTTCTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLGYSSP*SCFWFE
Trigger: TTCAAACCAGAAGCAGGATCAAGGACTGGAGTATCC...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVATLYT*VLSGSE
Trigger: CTCTGAACCAGACAGCACTCATGTGTACAATGTTGC...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGCAAAGACTGCTATCTaGTATTCAGTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHAKTAI*YSVKDI
Trigger: GATGTCTTTAACTGAATATCAGATAGCAGTCTTTGC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAGCAAAGACTGCTATCTaGTATTCAGTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTAKTAI*YSVKDI
Trigger: GATGTCTTTAACTGAATATCAGATAGCAGTCTTTGC...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGGCCTTCAATAACATGTaGGTCCTGCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWAFNNM*VLLFFQ
Trigger: CTGAAAGAAGAGCAGGACTCACATGTTATTGAAGGC...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAATCTATCAACACCTTTaGAATCTGGTGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTIYQHL*NLVMKD
Trigger: GTCTTTCATCACCAGATTTCAAAGGTGTTGATAGAT...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS-3UTR TCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCACATAGCCACGAAGCATaGTGTTTCCTAACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPHSHEA*CFLTSK
Trigger: CTTTGAGGTTAGGAAACATCATGCTTCGTGGCTATG...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGAGCATATGGCCTTTTATaGCCCAACTTTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRAYGLL*PNFGAR
Trigger: TCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGC...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAATTTTTCATCTCCAATaGTCCAGGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIIFHLQ*SRIHPP
Trigger: TGGTGGATGGATCCTGGAGCATTGGAGATGAAAAAT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000247781.4
CDS-3UTR GCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTATCCTGCAAGATCAATaGCATCCTTGTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVILQDQ*HPCVPL
Trigger: CAGTGGTACACAAGGATGGCATTGATCTTGCAGGAT...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCATCATCTTAAATCCTaGAAGATCAATGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPHHLKS*KINAIL
Trigger: AAGGATGGCATTGATCTTGCAGGATTTAAGATGATG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGCCTTCTCACCCACTTaGTTGCAGTCAATAACCACT +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEAFSPT*LQSITT
Trigger: AGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCTTGCGAAAACTTATCTaGATGTACAAAGTAATCCCC +
Preference number: 4 (lower is better)
Translates to: RKLICMYKVIPVDKERQPLRKLI*MYKVIP
Trigger: GGGGATTACTTTGTACATGCAGATAAGTTTTCGCAA...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAACCAGTACCGCATCTTaGGCTGGAAAATCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIITSTAS*AGKSSF
Trigger: AAATGAAGATTTTCCAGCGCAAGATGCGGTACTGGT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGACCAGTACCGCATCTTaGGCTGGAAAATCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVETSTAS*AGKSSF
Trigger: AAATGAAGATTTTCCAGCGCAAGATGCGGTACTGGT...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGACCTTGGACAATGGTaGAGAAATAAACAATTGCCA +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHDLGQW*RNKQLP
Trigger: TGGCAATTGTTTATTTCTGCACCATTGTCCAAGGTC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAAAGGCCTTGAATAATTaGTTTAGTTGCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVKALNN*FSCSVL
Trigger: CAGAACACTGCAACTAAAGCAATTATTCAAGGCCTT...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTTACAATGTCAGCAATTaGTGGAGTTTGACAGACAAA +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSYNVSN*WSLTDK
Trigger: TTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTA...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGGTCACCACTATACTGTaGAAGACCAATTCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEVTTIL*KTNSCL
Trigger: AAGACACGAATTGGTCTTGCACAGTATAGTGGTGAC...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGACATTGTACACATGAGTaGTGTCTGGTTCAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRHCTHE*CLVQRR
Trigger: TCGCCTCTGAACCAGACAGCACTCATGTGTACAATG...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACAGTGTGGGCATAGATTaGAAAGACTGCTATCTGATA +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHSVGID*KDCYLI
Trigger: TATCAGATAGCAGTCTTTGCAATCTATGCCCACACT...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGAGTCACCCTAAACTGCTaGACATCGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRVTLNC*TSLSEM
Trigger: CATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGAC...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp CTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTTCAGTCCCATATACAGACACAAGTaGATATGGCCTTTTATGACC +
Preference number: 4 (lower is better)
Translates to: LQREGSNRIDFNLIDFSPIYRHK*IWPFMT
Trigger: GGTCATAAAAGGCCATATGCACTTGTGTCTGTATAT...GGGACTGAAATCAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTAGTGGGCACACAAGCTaGTCATTTCAACATGTTTGG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLSGHTS*SFQHVW
Trigger: CCAAACATGTTGAAATGACCAGCTTGTGTGCCCACT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCACTAATTGCATCTCCCTaGAGATTTTGTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWALIASP*RFCSHH
Trigger: ATGATGTGAACAAAATCTCCAGGGAGATGCAATTAG...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAAGTACCTGGTTGGCTaGGAAACCAGGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQKYLVG*ETRASL
Trigger: TAAAGATGCCCTGGTTTCCCAGCCAACCAGGTACTT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGGAATGGGGAAGGTCTaGGCAAGACTCATCATCTCT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFGMGKV*ARLIIS
Trigger: AGAGATGATGAGTCTTGCCCAGACCTTCCCCATTCC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCGGGCATTCCTTGAATaGACAGACCACTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFRAFLE*TDHLVL
Trigger: AAGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAAGAGTACCGCATCTTGCGCTaGAAAATCTTCATTTTATTT +
Preference number: 4 (lower is better)
Translates to: WLSSDVITPSCLEQSGQEYRILR*KIFILF
Trigger: AAATAAAATGAAGATTTTCCAGCGCAAGATGCGGTA...CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCACTTGACCTTGGACAATaGTGCAGAAATAAACAATTG +
Preference number: 4 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWALDLGQ*CRNKQL
Trigger: CAATTGTTTATTTCTGCACCATTGTCCAAGGTCAAG...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTACTTGACCTTGGACAATaGTGCAGAAATAAACAATTG +
Preference number: 4 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVLDLGQ*CRNKQL
Trigger: CAATTGTTTATTTCTGCACCATTGTCCAAGGTCAAG...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTTCTGCAGATTCAGCTaGTTAGTTTTTCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHFCRFS*LVFPPE
Trigger: TTCAGGTGGAAAAACTAACCAGCTGAATCTGCAGAA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPISKYC*AGTSSV
Trigger: CACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAAT...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAAAAAACTGTCAAGTGTaGTCCCGACAGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREKNCQV*SRQQSP
Trigger: TGGTGACTGCTGTCGGGACCACACTTGACAGTTTTT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTAATGTCTGGGGCCAATaGAACCAGAGTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVNVWGQ*NQSGGF
Trigger: AAATCCTCCACTCTGGTTCCATTGGCCCCAGACATT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGGATCATCAGTGAACTaGACCATTGCAACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREGSSVN*TIATWV
Trigger: AACCCAAGTTGCAATGGTTCAGTTCACTGATGATCC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTTCTGGGATCATCAGTaGACTGAACCATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: TSYQVISELDRSIKQEVVFWDHQ*TEPLQL
Trigger: AAGTTGCAATGGTTCAGTTCACTGATGATCCCAGAA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTTCTGGGATCATCAGTaGACTGAACCATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWFWDHQ*TEPLQL
Trigger: AAGTTGCAATGGTTCAGTTCACTGATGATCCCAGAA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTTACCTGACTCTGCAGTaGACAAGGTATCTCGAACAT +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVYLTLQ*TRYLEH
Trigger: ATGTTCGAGATACCTTGTTCACTGCAGAGTCAGGTA...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGTCTGTATTGGCCCATaGTGTGGAGCAAACAATATC +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIVCIGP*CGANNI
Trigger: GATATTGTTTGCTCCACATCATGGGCCAATACAGAC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTTTCACTTCTTCTGGTaGAGATGGTCTACTCCCATT +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLFHFFW*RWSTPI
Trigger: AATGGGAGTAGACCATCTTCACCAGAAGAAGTGAAA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTAGTGATGGCATGGGCTaGGGCTTTAATTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSSDGMG*GFNFSV
Trigger: GACAGAGAAATTAAAGCCTCAGCCCATGCCATCACT...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACTACAACTAGGTTTCTaGTTCCCGTCTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRELQLGF*FPSGKL
Trigger: CAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTAGATGGGAGTCACTGTaGCTTTGTATTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEARWESL*LCIQYQ
Trigger: CTGATACTGAATACAAAGTCACAGTGACTCCCATCT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTATTGGACCAGGAACACTaGCAGGTTTGTAGACAATTC +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLLDQEH*QVCRQF
Trigger: GAATTGTCTACAAACCTGTCAGTGTTCCTGGTCCAA...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGGTGTTAGCCTTTTCCTaGTCCAGAAAGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMVLAFS*SRKNPA
Trigger: AGCTGGATTCTTTCTGGATCAGGAAAAGGCTAACAC...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGCTTACATACTTCTTTTaGTGGTGGAATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWLTYFF*WWNGWR
Trigger: CCTCCAACCATTCCACCAGCAAAAGAAGTATGTAAG...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTAGTGAACTGAACCATTaGAACTTGGGTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEASELNH*NLGSIC
Trigger: ACAGATGGAACCCAAGTTGCAATGGTTCAGTTCACT...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAATCCTGCAAGATCAATaGCATCCTTGTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIILQDQ*HPCVPL
Trigger: CAGTGGTACACAAGGATGGCATTGATCTTGCAGGAT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGAATAATTGCTTTAGTTaGAGTGTTCTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVNNCFS*SVLQIQ
Trigger: CTGAATCTGCAGAACACTGCAACTAAAGCAATTATT...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGGGCCTTGAGCTGGCTTaGTTTCTTTATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEGLELA*FLYLYC
Trigger: ACAATAAAGATAAAGAAAGCAAGCCAGCTCAAGGCC...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTACAATGTCAGCAATTaGTGGAGTTTGACAGACAAA +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHYNVSN*WSLTDK
Trigger: TTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGTCACCACTATACTGTaGAAGACCAATTCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAVTTIL*KTNSCL
Trigger: AAGACACGAATTGGTCTTGCACAGTATAGTGGTGAC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGTCACCACTATACTGTaGAAGACCAATTCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYVTTIL*KTNSCL
Trigger: AAGACACGAATTGGTCTTGCACAGTATAGTGGTGAC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCATTGTACACATGAGTaGTGTCTGGTTCAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFHCTHE*CLVQRR
Trigger: TCGCCTCTGAACCAGACAGCACTCATGTGTACAATG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSDFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR GCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTGTCACCCTAAACTGCTaGACATCGCTGTCAGAAATG +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSVTLNC*TSLSEM
Trigger: CATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGAC...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTCAACATGTTTGGCTTaGAGATTGGTAACACCCAAG +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLSTCLA*RLVTPK
Trigger: CTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTGCTTTTGCCTATCCTaGAGGGATTCTATAACAACC +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEACFCLS*RDSITT
Trigger: GGTTGTTATAGAATCCCTCCAGGATAGGCAAAAGCA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAACATACTTCTTTTGCTaGTGGAATGGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIITYFFC*WNGWRK
Trigger: TTTCCTCCAACCATTCCACCAGCAAAAGAAGTATGT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTAACCACGATAACCTTTaGGATGCCCCTTCTTGTACC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFNHDNL*DAPSCT
Trigger: GGTACAAGAAGGGGCATCCCAAAGGTTATCGTGGTT...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTCAAACATCTGTAACTaGAACGGTGCAGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYSNICN*NGAEFP
Trigger: TGGAAACTCTGCACCGTTCCAGTTACAGATGTTTGA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTATTGGCCCATGATGTaGAGCAAACAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHYWPMM*SKQYQT
Trigger: TGTTTGATATTGTTTGCTCCACATCATGGGCCAATA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTAGCATTTGTCTGTATTaGCCCATGATGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLSICLY*PMMWSK
Trigger: TTTGCTCCACATCATGGGCCAATACAGACAAATGCT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGTACCGCATCTTGCGCTaGAAAATCTTCATTTTATTT +
Preference number: 4 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVYRILR*KIFILF
Trigger: AAATAAAATGAAGATTTTCCAGCGCAAGATGCGGTA...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GAGCAAGTTGTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAATTTCCTCCTTTATATaGGAGGTTTCGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: EQVVHGASFGFIKVTKKPISSFI*EVSDSF
Trigger: GAAGCTGTCCGAAACCTCCCATATAAAGGAGGAAAT...TGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTACAACTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTATTAAAATGCCAATTTTaGATACTCCAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVLKCQF*ILQSLI
Trigger: GATCAAGGACTGGAGTATCCAAAATTGGCATTTTAA...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGGAATAATGTCATCTTaGGATTTTCCATCTGTGATT +
Preference number: 4 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHGIMSS*DFPSVI
Trigger: AATCACAGATGGAAAATCCCAAGATGACATTATTCC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAGGAATAATGTCATCTTaGGATTTTCCATCTGTGATT +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTGIMSS*DFPSVI
Trigger: AATCACAGATGGAAAATCCCAAGATGACATTATTCC...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAAGTTTTTCAACACTGTaGAAGATACAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTSFSTL*KIQFHL
Trigger: TAGATGGAACTGTATCTTCCACAGTGTTGAAAAACT...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTAATTCAATATCTGTGTaGGTCTCTCCAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: ASSGVRLTENISFWRWQSNSISV*VSPIFI
Trigger: GATGAAAATTGGAGAGACCCACACAGATATTGAATT...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAATTTCTAAGTATTGCTaGGCTGGAACTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIISKYC*AGTSSV
Trigger: CACCGAGGAAGTTCCAGCCCAGCAATACTTAGAAAT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGAGACACAAGTGCATATaGCCTTTTATGACCCAACTT +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVERHKCI*PFMTQL
Trigger: AAGTTGGGTCATAAAAGGCCATATGCACTTGTGTCT...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACACTCTGGTCATAGTTaGAATATGTTAGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIHSGHS*NMLEFS
Trigger: GGAAAACTCTAACATATTTCAACTATGACCAGAGTG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGTCTGTATTGGCCCATaGTGTGGAGCAAACAATATC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFVCIGP*CGANNI
Trigger: GATATTGTTTGCTCCACATCATGGGCCAATACAGAC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGATTCTGAATTGGCCTTaGGCTGGCTTGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEILNWP*AGLLSL
Trigger: TAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAAT...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGAATTCTGAATTGGCCTTaGGCTGGCTTGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRILNWP*AGLLSL
Trigger: TAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAAT...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGGCAATTGCTGGAGTTTaGCAGACAAATTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWAIAGV*QTNFTS
Trigger: AGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGC...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTAGATGGGAGTCACTGTaGCTTTGTATTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVRWESL*LCIQYQ
Trigger: CTGATACTGAATACAAAGTCACAGTGACTCCCATCT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAATGCACAACTCAAGAATaGTGTGAATGGATTAGAATC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKCTTQE*CEWIRI
Trigger: GATTCTAATCCATTCACATCATTCTTGAGTTGTGCA...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAGTGAACTGAACCATTaGAACTTGGGTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSELNH*NLGSIC
Trigger: ACAGATGGAACCCAAGTTGCAATGGTTCAGTTCACT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCGGCCACACCAATTaGAAAAATGCTATAGCCATC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREIGHTN*KNAIAI
Trigger: GATGGCTATAGCATTTTTGCAATTGGTGTGGCCGAT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGACCCCTGGAACACACTaGTGGATAAATCGTTCATTA +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMTPGTH*WINRSL
Trigger: TAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATAATAATTGCTTTAGTTaGAGTGTTCTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDNNCFS*SVLQIQ
Trigger: CTGAATCTGCAGAACACTGCAACTAAAGCAATTATT...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTATAACATGTGAGTCCTaGTCTTCTTTCAGGACAACC +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVITCES*SSFRTT
Trigger: GGTTGTCCTGAAAGAAGAGCAGGACTCACATGTTAT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAAATTTTCATCTCCAATaGTCCAGGATCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLNFHLQ*SRIHPP
Trigger: TGGTGGATGGATCCTGGAGCATTGGAGATGAAAATT...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTATGCTTTTGCCTATCCTaGAGGGATTCTATAACAACC +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLCFCLS*RDSITT
Trigger: GGTTGTTATAGAATCCCTCCAGGATAGGCAAAAGCA...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACTAATTGCATCTCCCTaGAGATTTTGTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKLIASP*RFCSHH
Trigger: ATGATGTGAACAAAATCTCCAGGGAGATGCAATTAG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTCAAACATCTGTAACTaGAACGGTGCAGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMSNICN*NGAEFP
Trigger: TGGAAACTCTGCACCGTTCCAGTTACAGATGTTTGA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAGCATTTGTCTGTATTaGCCCATGATGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSICLY*PMMWSK
Trigger: TTTGCTCCACATCATGGGCCAATACAGACAAATGCT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTAGCATTTGTCTGTATTaGCCCATGATGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVSICLY*PMMWSK
Trigger: TTTGCTCCACATCATGGGCCAATACAGACAAATGCT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTTCTGCAGATTCAGCTaGTTAGTTTTTCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLFCRFS*LVFPPE
Trigger: TTCAGGTGGAAAAACTAACCAGCTGAATCTGCAGAA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTATTTCCTCCTTTATATaGGAGGTTTCGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVISSFI*EVSDSF
Trigger: GAAGCTGTCCGAAACCTCCCATATAAAGGAGGAAAT...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATAGTTTTTCAACACTGTaGAAGATACAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDSFSTL*KIQFHL
Trigger: TAGATGGAACTGTATCTTCCACAGTGTTGAAAAACT...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
3UTR CAA 72 bp GATACACATGAAACCAGTTACCAAGTGATCTCAGAGTaGGACAGATCAATTAAACAAGAGGTAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DTHETSYQVISE*DRSIKQEVVSP
Trigger: TGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGTTAGTTTTTCCACCTaGAGTTGGAGTCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFVSFST*SWSHKK
Trigger: CTTCTTGTGACTCCAACTTCAGGTGGAAAAACTAAC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAAAGGAAATGGCTGCTaGTTATCTGCTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: SETQNKKQLITHPSHLSWKGNGC*LSAHYL
Trigger: AAGATAATGAGCAGATAATCAGCAGCCATTTCCTTT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACACCAATTGCAAAAATaGTATAGCCATCTAATTGCA +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIHQLQK*YSHLIA
Trigger: TGCAATTAGATGGCTATAGCATTTTTGCAATTGGTG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCATCATCTTAAATCCTaGAAGATCAATGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYHHLKS*KINAIL
Trigger: AAGGATGGCATTGATCTTGCAGGATTTAAGATGATG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTACCCCTGGAACACACTaGTGGATAAATCGTTCATTA +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSTPGTH*WINRSL
Trigger: TAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGT...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGACCTTGGACAATGGTaGAGAAATAAACAATTGCCA +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPIDLGQW*RNKQLP
Trigger: TGGCAATTGTTTATTTCTGCACCATTGTCCAAGGTC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATTAGTTGCAGTGTTCTaGAGATTCAGCTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRELVAVF*RFSWLV
Trigger: AACTAACCAGCTGAATCTGCAGAACACTGCAACTAA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATAAGGCCTTGAATAATTaGTTTAGTTGCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYKALNN*FSCSVL
Trigger: CAGAACACTGCAACTAAAGCAATTATTCAAGGCCTT...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAACTAAATGCATTCAAGTaGCATTCTATTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQLNAFK*HSILGS
Trigger: TGACCCCAGAATAGAATGGCACTTGAATGCATTTAG...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAGTGTGGGCATAGATTaGAAAGACTGCTATCTGATA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQSVGID*KDCYLI
Trigger: TATCAGATAGCAGTCTTTGCAATCTATGCCCACACT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 4 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEDFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATACTTCTTTTGCTGGTaGAATGGTTGGAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREYFFCW*NGWRKS
Trigger: ACTTTTCCTCCAACCATTCCACCAGCAAAAGAAGTA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAACATACTTCTTTTGCTaGTGGAATGGTTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPITYFFC*WNGWRK
Trigger: TTTCCTCCAACCATTCCACCAGCAAAAGAAGTATGT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAATGGAGTTGGTAACATaGAAACACATTGAAGGTACC +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQMELVT*KHIEGT
Trigger: GGTACCTTCAATGTGTTTCCATGTTACCAACTCCAT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTATTTCCTCCTTTATATaGGAGGTTTCGGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFISSFI*EVSDSF
Trigger: GAAGCTGTCCGAAACCTCCCATATAAAGGAGGAAAT...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAATTAAAATGCCAATTTTaGATACTCCAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKLKCQF*ILQSLI
Trigger: GATCAAGGACTGGAGTATCCAAAATTGGCATTTTAA...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAAGTTTTTCAACACTGTaGAAGATACAGTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKSFSTL*KIQFHL
Trigger: TAGATGGAACTGTATCTTCCACAGTGTTGAAAAACT...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCTGTGTATTCTGTATTaGGCAACAACCCACTCAATT +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVLCILY*ATTHSI
Trigger: AATTGAGTGGGTTGTTGCCCAATACAGAATACACAG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATTTCTGATTCCCGTCTaGAAAACTGAAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREFLIPV*KTEVTD
Trigger: ATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAAAAAATCTGATATACTaGGTCCAAGTGATGACACAT +
Preference number: 4 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIKNLIY*VQVMTH
Trigger: ATGTGTCATCACTTGGACCCAGTATATCAGATTTTT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGTTCACATCATCTTGTaGTCTTCCATCAGTTATAAC +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREVHIIL*SSISYN
Trigger: GTTATAACTGATGGAAGATCACAAGATGATGTGAAC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR TCA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCACTCTGGTCATAGTTaGAATATGTTAGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVHSGHS*NMLEFS
Trigger: GGAAAACTCTAACATATTTCAACTATGACCAGAGTG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR TCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAACTTTGAGAGTCTTCTaGGTGACATGGTATTTAACT +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLTLRVF*VTWYLT
Trigger: AGTTAAATACCATGTCACTCAGAAGACTCTCAAAGT...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCATCATCTTAAATCCTaGAAGATCAATGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMHHLKS*KINAIL
Trigger: AAGGATGGCATTGATCTTGCAGGATTTAAGATGATG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTGGCCTTGAGCTGGCTTaGTTTCTTTATCTTTATTGT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFGLELA*FLYLYC
Trigger: ACAATAAAGATAAAGAAAGCAAGCCAGCTCAAGGCC...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACTAATTGCATCTCCCTaGAGATTTTGTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRELIASP*RFCSHH
Trigger: ATGATGTGAACAAAATCTCCAGGGAGATGCAATTAG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATATTGGCCCATGATGTaGAGCAAACAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQYWPMM*SKQYQT
Trigger: TGTTTGATATTGTTTGCTCCACATCATGGGCCAATA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTCTTTGCATCAGAGCTaGTGGAAAATCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: KQDSLRVLAVGLQISPEASLHQS*WKIIIS
Trigger: TGAAATAATGATTTTCCACCAGCTCTGATGCAAAGA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAACCTGGAACACACTGCTaGATAAATCGTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: THETSYQVISELDRSIKQPGTHC*INRSLK
Trigger: TTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGG...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCCTGGAACACACTGCTaGATAAATCGTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMPGTHC*INRSLK
Trigger: TTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAACTTGACCTTGGACAATaGTGCAGAAATAAACAATTG +
Preference number: 4 (lower is better)
Translates to: SLLWKNKLSDMPLRHQRELDLGQ*CRNKQL
Trigger: CAATTGTTTATTTCTGCACCATTGTCCAAGGTCAAG...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGACTTGACCTTGGACAATaGTGCAGAAATAAACAATTG +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRLDLGQ*CRNKQL
Trigger: CAATTGTTTATTTCTGCACCATTGTCCAAGGTCAAG...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCTGTGTATTCTGTATTaGGCAACAACCCACTCAATT +
Preference number: 4 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSLCILY*ATTHSI
Trigger: AATTGAGTGGGTTGTTGCCCAATACAGAATACACAG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR TCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCACTCTGGTCATAGTTaGAATATGTTAGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFHSGHS*NMLEFS
Trigger: GGAAAACTCTAACATATTTCAACTATGACCAGAGTG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR GCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGAATAATTGCTTTAGTTaGAGTGTTCTGCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMNNCFS*SVLQIQ
Trigger: CTGAATCTGCAGAACACTGCAACTAAAGCAATTATT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTAAGGCCTTGAATAATTaGTTTAGTTGCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFKALNN*FSCSVL
Trigger: CAGAACACTGCAACTAAAGCAATTATTCAAGGCCTT...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 4 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLDFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR GCA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGATTTCAGTCCCATCTaGATTGTTATATACAATTCG +
Preference number: 4 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEDFSPI*IVIYNS
Trigger: CGAATTGTATATAACAATGCAGATGGGACTGAAATC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTATTGGCCCATGATGTaGAGCAAACAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFYWPMM*SKQYQT
Trigger: TGTTTGATATTGTTTGCTCCACATCATGGGCCAATA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTCTTTGCATCAGAGCTaGTGGAAAATCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMSLHQS*WKIIIS
Trigger: TGAAATAATGATTTTCCACCAGCTCTGATGCAAAGA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CCA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGATACCGCATCTTGCGCTaGAAAATCTTCATTTTATTT +
Preference number: 4 (lower is better)
Translates to: STSTSLISVPSALLYTIRYRILR*KIFILF
Trigger: AAATAAAATGAAGATTTTCCAGCGCAAGATGCGGTA...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CCA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGGGAATAATGTCATCTTaGGATTTTCCATCTGTGATT +
Preference number: 4 (lower is better)
Translates to: NKLSDMPLRHQREIIATMGIMSS*DFPSVI
Trigger: AATCACAGATGGAAAATCCCAAGATGACATTATTCC...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAAATTCAATATCTGTGTaGGTCTCTCCAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: QVISELDRSIKQEVVSPINSISV*VSPIFI
Trigger: GATGAAAATTGGAGAGACCCACACAGATATTGAATT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CCA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTACCGCATCTTGCGCTaGAAAATCTTCATTTTATTT +
Preference number: 4 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFYRILR*KIFILF
Trigger: AAATAAAATGAAGATTTTCCAGCGCAAGATGCGGTA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS CCA 90 bp AGGGCCATCTGGTCCCTTTGGACCCGGTTCACCTTGCTGGCCCTTTaGTCCTCGGAGTCCTGGACCACCTGGTGGGCCCGCTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RAIWSLWTRFTLLAL*SSESWTTWWARWSQ
Trigger: CTGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 90 bp GGACACCAGGTGGTCCCAGGGCGCCTTGCGGTCCCATGCTTCCTGTaGTCCCTGGGACTCCAGGGGTGCCAGGAATGCCTATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GHQVVPGRLAVPCFL*SLGLQGCQECLLAL
Trigger: CAGGGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCACCTGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 90 bp AGGTGGTCCCAGGGCGCCTTGCGGTCCCATGCTTCCTGTGATCCCTaGGACTCCAGGGGTGCCAGGAATGCCTATTGGCCCTGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RWSQGALRSHASCDP*DSRGARNAYWPWWS
Trigger: GGACCACCAGGGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 90 bp TGGGAGCTCTCCGCGCCTAGGCAAGATCGAAGCTCCGCCGCTAGTTaGTCCTTGGCGGCGCACCGCCCTTGCTCTCTTCCCTCGGAGTAT +
Preference number: 5 (lower is better)
Translates to: WELSAPRQDRSSAAS*SLAAHRPCSLPSEY
Trigger: ATACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAGGCGCGGAGAGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS CCA 90 bp TCTCCGCGCCTAGGCAAGATCGAAGCTCCGCCGCTAGTTGGTCCTTaGCGGCGCACCGCCCTTGCTCTCTTCCCTCGGAGTATCCTTTTT +
Preference number: 5 (lower is better)
Translates to: SPRLGKIEAPPLVGP*RRTALALFPRSILF
Trigger: AAAAAGGATACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAGGCGCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS TCA 90 bp GGCCATGTGACTCTGGATGAGCTGTTCGCATACTTGACGCGCCACTaGTCTCACCATGGCTTGAGACTGCAGGTCACCCCGCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GHVTLDELFAYLTRH*SHHGLRLQVTPLSS
Trigger: CGAGGAGAGCGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGCTCATCCAGAGTCACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 90 bp GGGCATTCCTTGAATGGACAGACCACTTGGTCCTTGAGGTCCAGGTaGACCCTGAGGTCCTGGCAGACCAATTTCACCCCGAGGGCCATC +
Preference number: 5 (lower is better)
Translates to: GHSLNGQTTWSLRSR*TLRSWQTNFTPRAI
Trigger: GATGGCCCTCGGGGTGAAATTGGTCTGCCAGGACCTCAGGGTCCACCTGGACCTCAAGGACCAAGTGGTCTGTCCATTCAAGGAATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS-3UTR CAA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACGCCGCTAGTTGGTCCTaGGCGGCGCACCGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNAASWS*AAHRPC
Trigger: GCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGC...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGACCTGGTGGGCCTCTaGGTCCAGGAGAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWDLVGL*VQESQG
Trigger: CCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGTC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGGGTGCAAGTACCTGGTaGGCTGGGAAACCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGGASTW*AGKPGH
Trigger: ATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCACC...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGCACCTTGCTGGCCCTTaGGTCCTCGGAGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWHLAGP*VLGVLD
Trigger: GTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTG...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATTGTGGGTGGAGCCACTaGACCTTGGACAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANCGWSH*TLDNGA
Trigger: TGCACCATTGTCCAAGGTCAAGTGGCTCCACCCACA...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACTCCTCGTTCCCCCTTaGCTCCAGGGACACCAGGTG +
Preference number: 5 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKLLVPP*LQGHQV
Trigger: CACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGAG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTGGGGCCTCTTGGACCTaGGGTTCCAACGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSGASWT*GSNAWI
Trigger: AATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCCC...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCACCACGCCCCGGGGCCTCTTGGACCTaGGGTTCCAACGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: TEISCWVKSSGCLNPPRPGASWT*GSNAWI
Trigger: AATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCCC...GGGGCGTGGTGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGGCGGCGCACCGCCCTaGCTCTCTTCCCTCGGAGTA +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPGGAPP*LSSLGV
Trigger: TACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATGGCACTGCATCCCATTaGACTCGCATGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANGTASH*TRMLFS
Trigger: TGAGAACAGCATGCGAGTCAAATGGGATGCAGTGCC...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGCCCAGAGCCACTTCATaGGTTTCAGAACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGPRATS*VSEQEQ
Trigger: CTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGGG...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAATGCCAGGAATGCCTATaGGCCCTGGTGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKCQECL*ALVVLE
Trigger: CTCCAGGACCACCAGGGCCAATAGGCATTCCTGGCA...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGGGGCCTCTTGGACCTaGGGTTCCAACGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAGASWT*GSNAWI
Trigger: AATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCCC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCAGACCTGGTGGGCCTCTaGGTCCAGGAGAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LRDTEISCWVKSSGCLNPDLVGL*VQESQG
Trigger: CCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGTC...TGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCTTCAGAAGGAGGTaGTTCTGGCTTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWGFRRR*FWLPGT
Trigger: GGTGCCTGGAAGCCAGAACAACCTCCTTCTGAAGCC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGCAGCCACTGGCCATaGCACCACCATCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: HPKLLHIAVRNVPFYPQASSHWP*HHHLSM
Trigger: CATGGAAAGATGGTGGTGCAATGGCCAGTGGCTGCT...AGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS CCA 90 bp GTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTaGGGCCAATGGAACCAGAGTGGAGGATTTCCACTTCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VVVVDRTVLYPQLNV*GQWNQSGGFPLQCW
Trigger: CCAGCACTGAAGTGGAAATCCTCCACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACTGGTCCCAGGGCGCCTaGCGGTCCCATGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHWSQGA*RSHASC
Trigger: ACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCA...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATTGGAGCCACTTGACCTaGGACAATGGTGCAGAAATA +
Preference number: 5 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANWSHLT*DNGAEI
Trigger: TATTTCTGCACCATTGTCCAAGGTCAAGTGGCTCCA...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWFLRVP*SCHVGH
Trigger: GTGACCTACATGACAGCTCAAGGGGACCCTGAGGAA...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS TCA 90 bp CAAGAACAATGTTTTCACCATGCCTGTCAGGGCGTCGCTGAAGCCTaGGGCCTGGGAGGCAAATATCTTCACATTGTAGTCCATTCCGCT +
Preference number: 5 (lower is better)
Translates to: QEQCFHHACQGVAEA*GLGGKYLHIVVHSA
Trigger: AGCGGAATGGACTACAATGTGAAGATATTTGCCTCCCAGGCCTCAGGCTTCAGCGACGCCCTGACAGGCATGGTGAAAACATTGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 90 bp ACTGACAGGTTTGTAGACAATTCTATAGCCTTTCACCGGGGAAGATaGGGGGTCCCACGTAATGCGCAACCGGTTATACCATTCCTCGGA +
Preference number: 5 (lower is better)
Translates to: TDRFVDNSIAFHRGR*GVPRNAQPVIPFLG
Trigger: TCCGAGGAATGGTATAACCGGTTGCGCATTACGTGGGACCCCCCATCTTCCCCGGTGAAAGGCTATAGAATTGTCTACAAACCTGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGTACCACTGGACAGGTaGCTGATGCTGTTTCGCAGA +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWVPLDR*LMLFRR
Trigger: TCTGCGAAACAGCATCAGCAACCTGTCCAGTGGTAC...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGCAGCATTTGTCTGTATaGGCCCATGATGTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGQHLSV*AHDVEQ
Trigger: TTGCTCCACATCATGGGCCAATACAGACAAATGCTG...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCTCCTCGTTCCCCCTTaGCTCCAGGGACACCAGGTG +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHLLVPP*LQGHQV
Trigger: CACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGAG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGACCTGGTGGGCCTCTaGGTCCAGGAGAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVDLVGL*VQESQG
Trigger: CCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGTC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGACCTGGTGGGCCTCTaGGTCCAGGAGAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEADLVGL*VQESQG
Trigger: CCCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGTC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGGCGGCGCACCGCCCTaGCTCTCTTCCCTCGGAGTA +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYGGAPP*LSSLGV
Trigger: TACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCC...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGCCGCTAGTTGGTCCTaGGCGGCGCACCGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREAASWS*AAHRPC
Trigger: GCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGTGGAGCCACTTGACCTaGGACAATGGTGCAGAAATA +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGWSHLT*DNGAEI
Trigger: TATTTCTGCACCATTGTCCAAGGTCAAGTGGCTCCA...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACTGGAGCCACTTGACCTaGGACAATGGTGCAGAAATA +
Preference number: 5 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHWSHLT*DNGAEI
Trigger: TATTTCTGCACCATTGTCCAAGGTCAAGTGGCTCCA...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTTGTGGGTGGAGCCACTaGACCTTGGACAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTACGWSH*TLDNGA
Trigger: TGCACCATTGTCCAAGGTCAAGTGGCTCCACCCACA...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GTCCCGACAGCAGTCACCACCTCACTCTCGCTTCCATCATCAAGTACGGCCAATGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: VPTAVTTSLSLPSSSTANGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...ATTGGCCGTACTTGATGATGGAAGCGAGAGTGAGGTGGTGACTGCTGTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLFLRVP*SCHVGH
Trigger: GTGACCTACATGACAGCTCAAGGGGACCCTGAGGAA...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS TCA 90 bp CAAATGGCTCCTGTGGAGTGTCAGGAAGAATCCGGAATAGAAAACTaGTTGTGTAGTCGGAGGGCAATCCTTCTGGGTGCAAGTACCTGG +
Preference number: 5 (lower is better)
Translates to: QMAPVECQEESGIEN*LCSRRAILLGASTW
Trigger: CCAGGTACTTGCACCCAGAAGGATTGCCCTCCGACTACACAATCAGTTTTCTATTCCGGATTCTTCCTGACACTCCACAGGAGCCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS GCA 90 bp CAACTGTGTGCATCAGATCGAATTCGGCAACATTGTACACATGAGTaGTGTCTGGTTCAGAGGCGATCTCCTGCAGCTCATTCACATCCG +
Preference number: 5 (lower is better)
Translates to: QLCASDRIRQHCTHE*CLVQRRSPAAHSHP
Trigger: CGGATGTGAATGAGCTGCAGGAGATCGCCTCTGAACCAGACAGCACTCATGTGTACAATGTTGCCGAATTCGATCTGATGCACACAGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS CCA 90 bp CCTGGTTGGCTGGGAAACCAGGGCATCTTTATGGAGTTGGTAACATaGAAACACATTGAAGGTACCAGGCTCCATAGAAACCCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PGWLGNQGIFMELVT*KHIEGTRLHRNPFH
Trigger: GTGGAAGGGGTTTCTATGGAGCCTGGTACCTTCAATGTGTTTCCATGTTACCAACTCCATAAAGATGCCCTGGTTTCCCAGCCAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCAGAAGCAATGCCTGGTaGTCCCTCCACCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPRSNAW*SLHPQW
Trigger: CCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATAGAAGCAATGCCTGGTaGTCCCTCCACCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHRSNAW*SLHPQW
Trigger: CCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCCATCTGTGCCAATCTaGTTCAGGGCTCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAPSVPI*FRAPTV
Trigger: CACTGTTGGAGCCCTGAACAAGATTGGCACAGATGG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGTACCACTGGACAGGTaGCTGATGCTGTTTCGCAGA +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAVPLDR*LMLFRR
Trigger: TCTGCGAAACAGCATCAGCAACCTGTCCAGTGGTAC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTGGTCCCAGGGCGCCTaGCGGTCCCATGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAWSQGA*RSHASC
Trigger: ACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTGGTCCCAGGGCGCCTaGCGGTCCCATGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: SETQNKKQLITHPSHLSWWSQGA*RSHASC
Trigger: ACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGGGAGTCACTGTGACTTaGTATTCAGTATCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGGVTVT*YSVSGS
Trigger: GCTTCCTGATACTGAATACAAAGTCACAGTGACTCC...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAGAAGCAGAGTGTCCATaGTTAGGGGCAGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAEAECP*LGAGAW
Trigger: CCAAGCCCCTGCCCCTAACAATGGACACTCTGCTTC...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CCAACTTTGGTGCTCGAACAGGTGCAAGGCAGCAGAAGAGAAGCAATATTTGAAAGCAGCCACTGGCCATaGCACCACCATCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: PTLVLEQVQGSRREAIFESSHWP*HHHLSM
Trigger: CATGGAAAGATGGTGGTGCAATGGCCAGTGGCTGCT...TTCAAATATTGCTTCTCTTCTGCTGCCTTGCACCTGTTCGAGCACCAAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACAGATTCTCAGGTTTCTaGGTGGACTTAAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHRFSGF*VDLKPQ
Trigger: CTGTGGCTTTAAGTCCACCAAGAAACCTGAGAATCT...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS TCA 90 bp TCCACAACTGTGTGCATCAGATCGAATTCGGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAGGCGATCTCCTGCAGCTCATTCACA +
Preference number: 5 (lower is better)
Translates to: STTVCIRSNSATLYT*VLSGSEAISCSSFT
Trigger: TGTGAATGAGCTGCAGGAGATCGCCTCTGAACCAGACAGCACTCATGTGTACAATGTTGCCGAATTCGATCTGATGCACACAGTTGTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS CCA 90 bp GTGCATCAGATCGAATTCGGCAACATTGTACACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTGCAGCTCATTCACATCCGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: VHQIEFGNIVHMSAV*FRGDLLQLIHIRVF
Trigger: AAAAACGCGGATGTGAATGAGCTGCAGGAGATCGCCTCTGAACCAGACAGCACTCATGTGTACAATGTTGCCGAATTCGATCTGATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGTTCAACATGTTTGGCTaGGAGATTGGTAACACCCAA +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGFNMFG*EIGNTQ
Trigger: TTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAA...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTAGTGGATTCTTGCTTTaGCCTATCCTGGAGGGATTC +
Preference number: 5 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSSGFLL*PILEGF
Trigger: GAATCCCTCCAGGATAGGCAAAAGCAAGAATCCACT...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTACCCACAGTGGATTCTaGCTTTTGCCTATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTATHSGF*LLPILE
Trigger: CTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CTCCATCATGTTTGGAGCAGAGTGGGCAAGAGGTTTGAAAGTGGGAAGGCAGGGTTCGAAAGTAACAGTTaGAAAATCCCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LHHVWSRVGKRFESGKAGFESNS*KIPTLV
Trigger: GACCAGAGTGGGGATTTTCAAACTGTTACTTTCGAA...CCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTCTGCTCCAAACATGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCACCTTGCTGGCCCTTaGGTCCTCGGAGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVHLAGP*VLGVLD
Trigger: GTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTGGACCCGGTTCACCTaGCTGGCCCTTTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYWTRFT*LALWSS
Trigger: CGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAGGCCATCTGGTCCCTTaGGACCCGGTTCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIGHLVP*DPVHLA
Trigger: AGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCC...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACAGACCACTTGGTCCTaGAGGTCCAGGTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIQTTWS*RSRWTL
Trigger: CAGGGTCCACCTGGACCTCAAGGACCAAGTGGTCTG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGAATGGACAGACCACTaGGTCCTTGAGGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPEWTDH*VLEVQV
Trigger: CACCTGGACCTCAAGGACCAAGTGGTCTGTCCATTC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCTCCTCGTTCCCCCTTaGCTCCAGGGACACCAGGTG +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVLLVPP*LQGHQV
Trigger: CACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGAG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGTGTGGGTGGAGCCACTaGACCTTGGACAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVCGWSH*TLDNGA
Trigger: TGCACCATTGTCCAAGGTCAAGTGGCTCCACCCACA...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATCCTCTGTCCACAACTTaGACTCTGGGCTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: HRLESTSICVALHQLRGDPLSTT*TLGFGS
Trigger: GGATCCAAAGCCCAGAGTCAAAGTTGTGGACAGAGG...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TCATCAAGTACGGCCAATAGTGAAACTTCATACTCCGTACCGGGCTCCAGGCCTCAGTGTGGGCATAGATaGCAAAGACTGCTATCTGAT +
Preference number: 5 (lower is better)
Translates to: SSSTANSETSYSVPGSRPQCGHR*QRLLSD
Trigger: ATCAGATAGCAGTCTTTGCAATCTATGCCCACACTG...AGGCCTGGAGCCCGGTACGGAGTATGAAGTTTCACTATTGGCCGTACTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CATAGACTGGAATCCACATCAATTTGTGTAGCCCTTCATCAGCTGAGAGGGGATGGCACTGCATCCCATTaGACTCGCATGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: HRLESTSICVALHQLRGDGTASH*TRMLFS
Trigger: TGAGAACAGCATGCGAGTCAAATGGGATGCAGTGCC...ATCCCCTCTCAGCTGATGAAGGGCTACACAAATTGATGTGGATTCCAGTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTGGGCTGGAACTTCCTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: KLSVVTSSISKYCWAGTSFLRVP*SCHVGH
Trigger: GTGACCTACATGACAGCTCAAGGGGACCCTGAGGAA...GGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATGAGTGGGCAAGAGGTTaGAAAGTGGGAAGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHEWARG*KVGRQG
Trigger: TCCCTGCCTTCCCACTTTCAAACCTCTTGCCCACTC...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS GCA 90 bp GATTTTCTTAAAGGCGTCAAAGTCATCCACAAAGAAGACATGGCGTaGGCTGGGCTTACTGCCAATGCTAACCAACTCCGAGTAATCTGC +
Preference number: 5 (lower is better)
Translates to: DFLKGVKVIHKEDMA*AGLTANANQLRVIC
Trigger: GCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTTAAGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 90 bp ACCTGCCAGTGGGCACACAAGCTGGTCATTTCAACATGTTTGGCTTaGAGATTGGTAACACCCAAGAACAATGTTTTCACCATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: TCQWAHKLVISTCLA*RLVTPKNNVFTMPV
Trigger: GACAGGCATGGTGAAAACATTGTTCTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAAATGACCAGCTTGTGTGCCCACTGGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTAGTGGATTCTTGCTTTaGCCTATCCTGGAGGGATTC +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTASGFLL*PILEGF
Trigger: GAATCCCTCCAGGATAGGCAAAAGCAAGAATCCACT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTCCTTACATACTTCTTTaGCTGGTGGAATGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSPYILL*LVEWLE
Trigger: CTCCAACCATTCCACCAGCAAAAGAAGTATGTAAGG...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTCTGAACCATTGCAACTaGGGTTCCATCTGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTALNHCN*GSICAN
Trigger: ATTGGCACAGATGGAACCCAAGTTGCAATGGTTCAG...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCCCAGAGCCACTTCATaGGTTTCAGAACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPPRATS*VSEQEQ
Trigger: CTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGGG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATGGACCCGGTTCACCTaGCTGGCCCTTTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREWTRFT*LALWSS
Trigger: CGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCAGACCACTTGGTCCTaGAGGTCCAGGTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVQTTWS*RSRWTL
Trigger: CAGGGTCCACCTGGACCTCAAGGACCAAGTGGTCTG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTTGCCAGGAATGCCTATaGGCCCTGGTGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEACQECL*ALVVLE
Trigger: CTCCAGGACCACCAGGGCCAATAGGCATTCCTGGCA...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTGCCAGGAATGCCTATaGGCCCTGGTGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYCQECL*ALVVLE
Trigger: CTCCAGGACCACCAGGGCCAATAGGCATTCCTGGCA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGGGGCCTCTTGGACCTaGGGTTCCAACGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAGASWT*GSNAWI
Trigger: AATCCAGGCGTTGGAACCCAAGGTCCAAGAGGCCCC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTACCTCTGTCCACAACTTaGACTCTGGGCTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVPLSTT*TLGFGS
Trigger: GGATCCAAAGCCCAGAGTCAAAGTTGTGGACAGAGG...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTCTTCCTCAGGGTCCCCTTGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACAGCAATTGCTGGAGTTaGACAGACAAATTTCACTTC +
Preference number: 5 (lower is better)
Translates to: FFLRVPLSCHVGHPKLLHSNCWS*TDKFHF
Trigger: GAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCT...GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGAGCCAATGTTGTTTCTaGTCCCGTAACAGGATCACT +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWSQCCF*SRNRIT
Trigger: AGTGATCCTGTTACGGGACAAGAAACAACATTGGCT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTTCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSSTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCAGAGTGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: DRTVLYPQLNVWGQWNQSGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...ACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATACCCACAGTGGATTCTaGCTTTTGCCTATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHTHSGF*LLPILE
Trigger: CTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCAATACCAGGTCAGCCTaGGCCGCCTTACATACTTCT +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPNTRSA*AALHTS
Trigger: AGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTATT...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGGTGCAAGTACCTGGTaGGCTGGGAAACCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAGASTW*AGKPGH
Trigger: ATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCACC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTGGTGCAAGTACCTGGTaGGCTGGGAAACCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVGASTW*AGKPGH
Trigger: ATGCCCTGGTTTCCCAGCCAACCAGGTACTTGCACC...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCATGCCTTCTCACCCACTaGCTTGCAGTCAATAACCAC +
Preference number: 5 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWACLLTH*LAVNNH
Trigger: GTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCA...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCACCTTGCTGGCCCTTaGGTCCTCGGAGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSHLAGP*VLGVLD
Trigger: GTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTTGGACCCGGTTCACCTaGCTGGCCCTTTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSWTRFT*LALWSS
Trigger: CGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCA...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGGCCATCTGGTCCCTTaGGACCCGGTTCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPIGHLVP*DPVHLA
Trigger: AGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGGCCATCTGGTCCCTTaGGACCCGGTTCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEGHLVP*DPVHLA
Trigger: AGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATGATTTGGTTCAGACCACTTGGTCCTaGAGGTCCAGGTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: QADMEQSVSIKIDIYDLVQTTWS*RSRWTL
Trigger: CAGGGTCCACCTGGACCTCAAGGACCAAGTGGTCTG...AACCAAATCATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCATTCCGGGCATTCCTaGAATGGACAGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHHSGHS*NGQTTW
Trigger: CCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAATG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGAATTCTGAATTGGCCTaGAGCTGGCTTGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWNSELA*SWLAFF
Trigger: AAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGGGCCAATGGAACCTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VVDRTVLYPQLNVWGQWNLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...GTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTGGAGTCACTGTGACTTaGTATTCAGTATCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAGVTVT*YSVSGS
Trigger: GCTTCCTGATACTGAATACAAAGTCACAGTGACTCC...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAATCACTCCATCATGTTaGGAGCAGAGTGGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWAITPSC*EQSGQE
Trigger: CTCTTGCCCACTCTGCTCCAAACATGATGGAGTGAT...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GTCCTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATAATCCACCACGCCCCTaGTACCTTCCCCATAAGGTT +
Preference number: 5 (lower is better)
Translates to: VLRDTEISCWVKSSGCLNNPPRP*YLPHKV
Trigger: AACCTTATGGGGAAGGTACAAGGGGCGTGGTGGATT...ATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGAGAAGCAATGCCTGGTaGTCCCTCCACCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMRSNAW*SLHPQW
Trigger: CCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CCTGGTGATCAGACAGACACCATCCTTCGTGTTAGCCTTTTCCTGATCCAGAAACAGTCAATAACCACTTaGACCAAAGTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: PGDQTDTILRVSLFLIQKQSITT*TKVSLT
Trigger: TGTCAGTGAGACTTTGGTCAAAGTGGTTATTGACTG...TTTCTGGATCAGGAAAAGGCTAACACGAAGGATGGTGTCTGTCTGATCACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTGTGGGTGGAGCCACTaGACCTTGGACAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYCGWSH*TLDNGA
Trigger: TGCACCATTGTCCAAGGTCAAGTGGCTCCACCCACA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGATCTTTAATTCTGAATaGGCCTTGAGCTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKIFNSE*ALSWLA
Trigger: AGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATCTTTAATTCTGAATaGGCCTTGAGCTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLIFNSE*ALSWLA
Trigger: AGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTGGTGGTGGTGGTGGTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTGGAGCAATTGCTGGAGTTaGACAGACAAATTTCACTTC +
Preference number: 5 (lower is better)
Translates to: LVVVVVDRTVLYPQLNVWSNCWS*TDKFHF
Trigger: GAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCT...CCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAACCACCACCACCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLFLRVP*SCHVGH
Trigger: GTGACCTACATGACAGCTCAAGGGGACCCTGAGGAA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGGCTTCAGAAGGAGGTaGTTCTGGCTTCCAGGCACC +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPIGFRRR*FWLPGT
Trigger: GGTGCCTGGAAGCCAGAACAACCTCCTTCTGAAGCC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTGCAGAGGTCATGCATTaGCAGGGTCTTTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLAEVMH*QGLCCL
Trigger: CAGGCAGCAAAGACCCTGCAAATGCATGACCTCTGC...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTGCAGTAAAGTTTGCATaGATCTCCGAAGACAGTCTT +
Preference number: 5 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSAVKFA*ISEDSL
Trigger: AAGACTGTCTTCGGAGATCAATGCAAACTTTACTGC...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGTCAGAGGTTATTAACTaGGAGCAAGTTGTACATGGA +
Preference number: 5 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPSEVIN*EQVVHG
Trigger: TCCATGTACAACTTGCTCCAAGTTAATAACCTCTGA...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS GCA 90 bp TCTGACGTGATATTAGCTGATGCGTTCATTGCCTTCTCACCCACTTaGTTGCAGTCAATAACCACTTTGACCAAAGTCTCACTGACAACA +
Preference number: 5 (lower is better)
Translates to: SDVILADAFIAFSPT*LQSITTLTKVSLTT
Trigger: TGTTGTCAGTGAGACTTTGGTCAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCAATGAACGCATCAGCTAATATCACGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS-3UTR CAA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAACCCACAGTGGATTCTaGCTTTTGCCTATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKTHSGF*LLPILE
Trigger: CTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGT...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTATCTCCCTGGAGATTTaGTTCACATCATCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTAISLEI*FTSSCD
Trigger: ATCACAAGATGATGTGAACAAAATCTCCAGGGAGAT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCATCGGCCACACCAATaGCAAAAATGCTATAGCCAT +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPHRPHQ*QKCYSH
Trigger: ATGGCTATAGCATTTTTGCAATTGGTGTGGCCGATG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACAGATCAATGCCATCCTaGTGTACCACTGGACAGGTT +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHRSMPS*CTTGQV
Trigger: AACCTGTCCAGTGGTACACAAGGATGGCATTGATCT...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATTTCCACCTGGTCCTCTaGATCGAACCATTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDFHLVL*IEPFSL
Trigger: TAGGGAAAATGGTTCGATCAAGAGGACCAGGTGGAA...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCGGAAGTTCACAGCATTaGTCTGTATTGGCCCATGAT +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPGSSQH*SVLAHD
Trigger: ATCATGGGCCAATACAGACAAATGCTGTGAACTTCC...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGAATGGACAGACCACTaGGTCCTTGAGGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREEWTDH*VLEVQV
Trigger: CACCTGGACCTCAAGGACCAAGTGGTCTGTCCATTC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGAATGGACAGACCACTaGGTCCTTGAGGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEEWTDH*VLEVQV
Trigger: CACCTGGACCTCAAGGACCAAGTGGTCTGTCCATTC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTCATTCCGGGCATTCCTaGAATGGACAGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLHSGHS*NGQTTW
Trigger: CCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAATG...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATAACCAGTACCGCATCTaGCGCTGGAAAATCTTCATT +
Preference number: 5 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHNQYRI*RWKIFI
Trigger: AATGAAGATTTTCCAGCGCAAGATGCGGTACTGGTT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACAAACCAGTACCGCATCTaGCGCTGGAAAATCTTCATT +
Preference number: 5 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTNQYRI*RWKIFI
Trigger: AATGAAGATTTTCCAGCGCAAGATGCGGTACTGGTT...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTCCTCTGTCCACAACTTaGACTCTGGGCTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLPLSTT*TLGFGS
Trigger: GGATCCAAAGCCCAGAGTCAAAGTTGTGGACAGAGG...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCCTCTGTCCACAACTTaGACTCTGGGCTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYPLSTT*TLGFGS
Trigger: GGATCCAAAGCCCAGAGTCAAAGTTGTGGACAGAGG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTTACAATGTCAGCAATaGCTGGAGTTTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSLQCQQ*LEFDRQ
Trigger: TTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGTTACAATGTCAGCAATaGCTGGAGTTTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLLQCQQ*LEFDRQ
Trigger: TTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAA...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTTCAGTCCCCAGTGTGGGCATAGATaGCAAAGACTGCTATCTGAT +
Preference number: 5 (lower is better)
Translates to: LQREGSNRIDFNLIDFSPQCGHR*QRLLSD
Trigger: ATCAGATAGCAGTCTTTGCAATCTATGCCCACACTG...GGGACTGAAATCAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AAACTGTCTGTCGTCACCTCATCAATTTCTAAGTATTGCTGGGCTGGAACTTCCTCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: KLSVVTSSISKYCWAGTSSTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...GGAAGTTCCAGCCCAGCAATACTTAGAAATTGATGAGGTGACGACAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACTGGGTCAGGCCATCTaGATGAGCCTTAGACAAGTT +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIILGQAI*MSLRQV
Trigger: AACTTGTCTAAGGCTCATCAAGATGGCCTGACCCAG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GTAGGTCACCCTAAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGAGAGTTTCTAGTCAGTaGAATTTATACAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: VGHPKLLHIAVRNVPFYPRVSSQ*NLYRPF
Trigger: GAACGGTCTGTATAAATTCAACTGACTAGAAACTCT...CGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTTAGGGTGACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AAACTGCTGCACATCGCTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTTCAGAGGTTATTAACTaGGAGCAAGTTGTACATGGA +
Preference number: 5 (lower is better)
Translates to: KLLHIAVRNVPFYPQARSSEVIN*EQVVHG
Trigger: TCCATGTACAACTTGCTCCAAGTTAATAACCTCTGA...ACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAGCGATGTGCAGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS TCA 90 bp CAAGAAATGCCGAACCAGTCTGAAGTTGAATCTTCCAATACTCCATaGACCATCGACCAGGATTACAATGTCAGCAATTGCTGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QEMPNQSEVESSNTP*TIDQDYNVSNCWSL
Trigger: CAAACTCCAGCAATTGCTGACATTGTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCATTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTAATACCAGGTCAGCCTaGGCCGCCTTACATACTTCT +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLNTRSA*AALHTS
Trigger: AGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTATT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATAATACCAGGTCAGCCTaGGCCGCCTTACATACTTCT +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYNTRSA*AALHTS
Trigger: AGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTATT...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATACCATCTGTGCCAATCTaGTTCAGGGCTCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPIPSVPI*FRAPTV
Trigger: CACTGTTGGAGCCCTGAACAAGATTGGCACAGATGG...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGCCATCTGTGCCAATCTaGTTCAGGGCTCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEPSVPI*FRAPTV
Trigger: CACTGTTGGAGCCCTGAACAAGATTGGCACAGATGG...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATACTGAACCATTGCAACTaGGGTTCCATCTGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIILNHCN*GSICAN
Trigger: ATTGGCACAGATGGAACCCAAGTTGCAATGGTTCAG...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAGTACCACTGGACAGGTaGCTGATGCTGTTTCGCAGA +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPIVPLDR*LMLFRR
Trigger: TCTGCGAAACAGCATCAGCAACCTGTCCAGTGGTAC...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATAAGATCAATGCCATCCTaGTGTACCACTGGACAGGTT +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIRSMPS*CTTGQV
Trigger: AACCTGTCCAGTGGTACACAAGGATGGCATTGATCT...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTTGCCTTCTCACCCACTaGCTTGCAGTCAATAACCAC +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLCLLTH*LAVNNH
Trigger: GTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCA...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATGGAAGTTCACAGCATTaGTCTGTATTGGCCCATGAT +
Preference number: 5 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDGSSQH*SVLAHD
Trigger: ATCATGGGCCAATACAGACAAATGCTGTGAACTTCC...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAACCCAGAGCCACTTCATaGGTTTCAGAACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQPRATS*VSEQEQ
Trigger: CTGCTCCTGTTCTGAAACCAATGAAGTGGCTCTGGG...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTACCAAAGGGAAATCATaGCTACCATGTCATAGATTA +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTATKGKS*LPCHRL
Trigger: TAATCTATGACATGGTAGCAATGATTTCCCTTTGGT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GCCAGTAGTGGAGTCAGATTAACAGAGAACATTAGTTTCTGGAGATGGCAGAGTAATTCTGAATTGGCCTaGAGCTGGCTTGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ASSGVRLTENISFWRWQSNSELA*SWLAFF
Trigger: AAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATT...ACTCTGCCATCTCCAGAAACTAATGTTCTCTGTTAATCTGACTCCACTACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CACAAGTGCATATGGCCTTTTATGACCCAACTTTGGTGCTCGAACAGGTGCAAGGATCCTGCTTCTGGTTaGAAGCTATTTTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: HKCIWPFMTQLWCSNRCKDPASG*KLFSKM
Trigger: CATTTTTGAAAATAGCTTCAAACCAGAAGCAGGATC...CTTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAAGGCCATATGCACTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GGTGTCAAGCCCTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGGATCCTGCTTCTGGTTaGAAGCTATTTTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: GVKPFRGKVVIGSTSTSLDPASG*KLFSKM
Trigger: CATTTTTGAAAATAGCTTCAAACCAGAAGCAGGATC...CAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAGGGCTTGACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACCAGTGTGGGCATAGATaGCAAAGACTGCTATCTGAT +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHQCGHR*QRLLSD
Trigger: ATCAGATAGCAGTCTTTGCAATCTATGCCCACACTG...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGGCACTGCATCCCATTaGACTCGCATGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQGTASH*TRMLFS
Trigger: TGAGAACAGCATGCGAGTCAAATGGGATGCAGTGCC...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGGGCACTGCATCCCATTaGACTCGCATGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEGTASH*TRMLFS
Trigger: TGAGAACAGCATGCGAGTCAAATGGGATGCAGTGCC...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTGGGCAACTGTGTATTCTGTATaGGGCAACAACCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: DLVKFRCYHSIMFGAEWATVYSV*GNNPLN
Trigger: ATTGAGTGGGTTGTTGCCCAATACAGAATACACAGT...TGCCCACTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TCACCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGACTGTGTATTCTGTATaGGGCAACAACCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: SPTTRFLIPVWKTEVTDVTVYSV*GNNPLN
Trigger: ATTGAGTGGGTTGTTGCCCAATACAGAATACACAGT...CACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CTGTCAGAAATGTCCCATTTTACCCGCAGGCTAGAAGTAGTTTCATCACCTACACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LSEMSHFTRRLEVVSSPTLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...TGTAGGTGATGAAACTACTTCTAGCCTGCGGGTAAAATGGGACATTTCTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVLLEPT*EILRFL
Trigger: AAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAG...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCTGGAACACACTGCTACATGGTATTTAACTTaGTTTCCAAGGGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: MYKVIPVDKERQPLEHTATWYLT*FPRAKY
Trigger: GTATTTGGCCCTTGGAAACAAAGTTAAATACCATGT...AGCAGTGTGTTCCAGGGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CTTCAGAGGGAAGGTAGTAATAGGATCGACTTCAACCTCATTGATTTCAGTCCCGCAGTAAAGTTTGCATaGATCTCCGAAGACAGTCTT +
Preference number: 5 (lower is better)
Translates to: LQREGSNRIDFNLIDFSPAVKFA*ISEDSL
Trigger: AAGACTGTCTTCGGAGATCAATGCAAACTTTACTGC...GGGACTGAAATCAATGAGGTTGAAGTCGATCCTATTACTACCTTCCCTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCTGAACCATTGCAACTaGGGTTCCATCTGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYLNHCN*GSICAN
Trigger: ATTGGCACAGATGGAACCCAAGTTGCAATGGTTCAG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCATATCTCCCTGGAGATTTaGTTCACATCATCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: IMKLSHRGVWDKFLAHDHISLEI*FTSSCD
Trigger: ATCACAAGATGATGTGAACAAAATCTCCAGGGAGAT...ATGATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGAGATCAATGCCATCCTaGTGTACCACTGGACAGGTT +
Preference number: 5 (lower is better)
Translates to: SETQNKKQLITHPSHLSWRSMPS*CTTGQV
Trigger: AACCTGTCCAGTGGTACACAAGGATGGCATTGATCT...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCAGTCAATAACCACTTaGACCAAAGTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDQSITT*TKVSLT
Trigger: TGTCAGTGAGACTTTGGTCAAAGTGGTTATTGACTG...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AGGAGAGGCAACCCCTGGAACACACTGCTGGATAAATCGTTCATTAAAATTATATTCTCACCCACTTGCTaGCAGTCAATAACCACTTTG +
Preference number: 5 (lower is better)
Translates to: RRGNPWNTLLDKSFIKIIFSPTC*QSITTL
Trigger: CAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAA...TATAATTTTAATGAACGATTTATCCAGCAGTGTGTTCCAGGGGTTGCCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGTTCCACCTGGTCCTCTaGATCGAACCATTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: SETQNKKQLITHPSHLSWFHLVL*IEPFSL
Trigger: TAGGGAAAATGGTTCGATCAAGAGGACCAGGTGGAA...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTGAGACACAGAATAAGAAGCAACTGATTACACACCCTAGTCATTTAAGTTGGCAGCATTTGTCTGTATaGGCCCATGATGTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SETQNKKQLITHPSHLSWQHLSV*AHDVEQ
Trigger: TTGCTCCACATCATGGGCCAATACAGACAAATGCTG...CCAACTTAAATGACTAGGGTGTGTAATCAGTTGCTTCTTATTCTGTGTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCATTCCGGGCATTCCTaGAATGGACAGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSHSGHS*NGQTTW
Trigger: CCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAATG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATATCTTTAATTCTGAATaGGCCTTGAGCTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: FIMKLSHRGVWDKFLAHDIFNSE*ALSWLA
Trigger: AGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT...ATCGTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ATAGCAATAGTATACTCTGTGAGAGGTGTCAAGCCCTTCAGAGGGAAGGTAGTAAGCAATTGCTGGAGTTaGACAGACAAATTTCACTTC +
Preference number: 5 (lower is better)
Translates to: IAIVYSVRGVKPFRGKVVSNCWS*TDKFHF
Trigger: GAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCT...TACTACCTTCCCTCTGAAGGGCTTGACACCTCTCACAGAGTATACTATTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACAGATTCTCAGGTTTCTaGGTGGACTTAAAGCCAATG +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHRFSGF*VDLKPM
Trigger: CATTGGCTTTAAGTCCACCAAGAAACCTGAGAATCT...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAAGGAATCCACATCAATTaGTGTAGCCCTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKGIHIN*CSPSSA
Trigger: AGCTGATGAAGGGCTACACAAATTGATGTGGATTCC...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp GTACATGGAGCAAGTTTTGGATTTATAAAGGTCACTAAGAAGCCAGTAGTGGAGTTTTATGACCCAACTTaGGTGCTCGAACAGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VHGASFGFIKVTKKPVVEFYDPT*VLEQVQ
Trigger: TTGCACCTGTTCGAGCACCAAAGTTGGGTCATAAAA...CTCCACTACTGGCTTCTTAGTGACCTTTATAAATCCAAAACTTGCTCCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS TCA 90 bp ATCAGTTATAACCACGATAACCTTTGGGATGCCCCTTCTTGTACCTaGCTCTGCAGTGAACAAGGTATCTCGAACATACTTAATTGCTTT +
Preference number: 5 (lower is better)
Translates to: ISYNHDNLWDAPSCT*LCSEQGISNILNCF
Trigger: AAAGCAATTAAGTATGTTCGAGATACCTTGTTCACTGCAGAGTCAGGTACAAGAAGGGGCATCCCAAAGGTTATCGTGGTTATAACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGTCATTTCAACATGTTaGGCTTGGAGATTGGTAACA +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHVISTC*AWRLVT
Trigger: TGTTACCAATCTCCAAGCCAAACATGTTGAAATGAC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAGTGGATTCTTGCTTTaGCCTATCCTGGAGGGATTC +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQSGFLL*PILEGF
Trigger: GAATCCCTCCAGGATAGGCAAAAGCAAGAATCCACT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATCATCGGCCACACCAATaGCAAAAATGCTATAGCCAT +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYHRPHQ*QKCYSH
Trigger: ATGGCTATAGCATTTTTGCAATTGGTGTGGCCGATG...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTTGCCTTCTCACCCACTaGCTTGCAGTCAATAACCAC +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSCLLTH*LAVNNH
Trigger: GTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCA...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp CTTAGAGACACAGAGATATCCTGCTGGGTAAAAAGCAGTGGATGTCTTAATCCATTTCCTTTTTCTCCTTaGATACCAGTTAGACCTCGT +
Preference number: 5 (lower is better)
Translates to: LRDTEISCWVKSSGCLNPFPFSP*IPVRPR
Trigger: ACGAGGTCTAACTGGTATCAAAGGAGAAAAAGGAAA...TGGATTAAGACATCCACTGCTTTTTACCCAGCAGGATATCTCTGTGTCTCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440844.5
CDS-3UTR CAA 90 bp CGAAAACTTATCTGCATGTACAAAGTAATCCCCGTAGATAAGGAGAGGCAACCCCAAGTGATCTCAGAGTaGGACAGATCAATTAAACAA +
Preference number: 5 (lower is better)
Translates to: RKLICMYKVIPVDKERQPQVISE*DRSIKQ
Trigger: TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG...GGGTTGCCTCTCCTTATCTACGGGGATTACTTTGTACATGCAGATAAGTTTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTCAGTGTGGGCATAGATaGCAAAGACTGCTATCTGAT +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVQCGHR*QRLLSD
Trigger: ATCAGATAGCAGTCTTTGCAATCTATGCCCACACTG...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTAGCCAATGTTGTTTCTaGTCCCGTAACAGGATCACT +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVSQCCF*SRNRIT
Trigger: AGTGATCCTGTTACGGGACAAGAAACAACATTGGCT...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVSTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp CCTACAACTAGGTTTCTGATTCCCGTCTGGAAAACTGAAGTCACAGATGTGGTAAGAGTTTCTAGTCAGTaGAATTTATACAGACCGTTC +
Preference number: 5 (lower is better)
Translates to: PTTRFLIPVWKTEVTDVVRVSSQ*NLYRPF
Trigger: GAACGGTCTGTATAAATTCAACTGACTAGAAACTCT...TACCACATCTGTGACTTCAGTTTTCCAGACGGGAATCAGAAACCTAGTTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTCTCACCCACTTGCTaGCAGTCAATAACCACTTTG +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPIFSPTC*QSITTL
Trigger: CAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAA...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTTCTCACCCACTTGCTaGCAGTCAATAACCACTTTG +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEFSPTC*QSITTL
Trigger: CAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAA...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTTCCACCTGGTCCTCTaGATCGAACCATTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFFHLVL*IEPFSL
Trigger: TAGGGAAAATGGTTCGATCAAGAGGACCAGGTGGAA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCAGCATTTGTCTGTATaGGCCCATGATGTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFQHLSV*AHDVEQ
Trigger: TTGCTCCACATCATGGGCCAATACAGACAAATGCTG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGGGAAGTTCACAGCATTaGTCTGTATTGGCCCATGAT +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMGSSQH*SVLAHD
Trigger: ATCATGGGCCAATACAGACAAATGCTGTGAACTTCC...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTTTCCCAATTCCTCTTaGAGCTCTCTTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVFPNSS*SSLLWK
Trigger: TTTCCAGAGAAGAGAGCTCAAAGAGGAATTGGGAAA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAAACCAGTACCGCATCTaGCGCTGGAAAATCTTCATT +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQNQYRI*RWKIFI
Trigger: AATGAAGATTTTCCAGCGCAAGATGCGGTACTGGTT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGAAACCAGTACCGCATCTaGCGCTGGAAAATCTTCATT +
Preference number: 5 (lower is better)
Translates to: STSTSLISVPSALLYTIRNQYRI*RWKIFI
Trigger: AATGAAGATTTTCCAGCGCAAGATGCGGTACTGGTT...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTTGGAGCCACTTGACCTaGGACAATGGTGCAGAAATA +
Preference number: 5 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFWSHLT*DNGAEI
Trigger: TATTTCTGCACCATTGTCCAAGGTCAAGTGGCTCCA...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp AACTTTATTATGAAGCTGTCACACAGGGGAGTCTGGGATAAATTCTTGGCACACGATCCTGCTTCTGGTTaGAAGCTATTTTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: NFIMKLSHRGVWDKFLAHDPASG*KLFSKM
Trigger: CATTTTTGAAAATAGCTTCAAACCAGAAGCAGGATC...GTGTGCCAAGAATTTATCCCAGACTCCCCTGTGTGACAGCTTCATAATAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp GCAAGGTTATTCCTACAGCAAGTAGGAGTAAGTGACATATTCTTTGAACCTCTTAGATTCTCAGGTTTCTaGGTGGACTTAAAGCCAATG +
Preference number: 5 (lower is better)
Translates to: ARLFLQQVGVSDIFFEPLRFSGF*VDLKPM
Trigger: CATTGGCTTTAAGTCCACCAAGAAACCTGAGAATCT...AAGAGGTTCAAAGAATATGTCACTTACTCCTACTTGCTGTAGGAATAACCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGATCGACTTCAACCTCATaGATTTCAGTCCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: STSTSLISVPSALLYTIRSTSTS*ISVPSA
Trigger: TGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp AGGCTTTCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACAAAGCCAAGTGTATTaGCACAACTCAAGAATGATG +
Preference number: 5 (lower is better)
Translates to: RLSSISEDRWAPQSTIDKQSQVY*HNSRMM
Trigger: CATCATTCTTGAGTTGTGCAAATACACTTGGCTTTG...TTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGAAAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS GCA 90 bp AATTTGAACTGTGTAATTCTGGTCTGGCATAAGGCCTTGAATAATTaGTTTAGTTGCAGTGTTCTGCAGATTCAGCTGGTTAGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: NLNCVILVWHKALNN*FSCSVLQIQLVSFS
Trigger: GGAAAAACTAACCAGCTGAATCTGCAGAACACTGCAACTAAAGCAATTATTCAAGGCCTTATGCCAGACCAGAATTACACAGTTCAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAATTCAACATGTTTGGCTaGGAGATTGGTAACACCCAA +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQFNMFG*EIGNTQ
Trigger: TTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAA...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AAACAAGATTCCTTAAGAGTTCTTGCAGTTGGTCTTCAAATTTCTCCTGAGGCTGTCATTTCAACATGTTaGGCTTGGAGATTGGTAACA +
Preference number: 5 (lower is better)
Translates to: KQDSLRVLAVGLQISPEAVISTC*AWRLVT
Trigger: TGTTACCAATCTCCAAGCCAAACATGTTGAAATGAC...AGCCTCAGGAGAAATTTGAAGACCAACTGCAAGAACTCTTAAGGAATCTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCCTTACATACTTCTTTaGCTGGTGGAATGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSPYILL*LVEWLE
Trigger: CTCCAACCATTCCACCAGCAAAAGAAGTATGTAAGG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCCTTACATACTTCTTTaGCTGGTGGAATGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFPYILL*LVEWLE
Trigger: CTCCAACCATTCCACCAGCAAAAGAAGTATGTAAGG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp GAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATATTGTCCCTTTTTCATCGGCCACACCAATaGCAAAAATGCTATAGCCAT +
Preference number: 5 (lower is better)
Translates to: ELDRSIKQEVVSPILSLFHRPHQ*QKCYSH
Trigger: ATGGCTATAGCATTTTTGCAATTGGTGTGGCCGATG...AAAAAGGGACAATATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTTCGAAAGTAACAGTTaGAAAATCCCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMFESNS*KIPTLV
Trigger: GACCAGAGTGGGGATTTTCAAACTGTTACTTTCGAA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTATTCGAAAGTAACAGTTaGAAAATCCCCACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLFESNS*KIPTLV
Trigger: GACCAGAGTGGGGATTTTCAAACTGTTACTTTCGAA...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTTTCCTTTTTCTCCTTaGATACCAGTTAGACCTCGT +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVFPFSP*IPVRPR
Trigger: ACGAGGTCTAACTGGTATCAAAGGAGAAAAAGGAAA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGTTTCCCAATTCCTCTTaGAGCTCTCTTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMFPNSS*SSLLWK
Trigger: TTTCCAGAGAAGAGAGCTCAAAGAGGAATTGGGAAA...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCCTCAATATCAGAAGATAGGTGGGCTCCTCAGTCAACTATTGATAAACATTTAAATTCTGAATTGGCCTaGAGCTGGCTTGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SSISEDRWAPQSTIDKHLNSELA*SWLAFF
Trigger: AAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATT...TAAATGTTTATCAATAGTTGACTGAGGAGCCCACCTATCTTCTGATATTGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCTTTAATTCTGAATaGGCCTTGAGCTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREIFNSE*ALSWLA
Trigger: AGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTTACAATGTCAGCAATaGCTGGAGTTTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: TSYQVISELDRSIKQEVVLQCQQ*LEFDRQ
Trigger: TTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAA...AACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp ACCTCTATCCAGGCTGACATGGAGCAGTCAGTGTCTATTAAAATAGACATATATTTACAATGTCAGCAATaGCTGGAGTTTGACAGACAA +
Preference number: 5 (lower is better)
Translates to: TSIQADMEQSVSIKIDIYLQCQQ*LEFDRQ
Trigger: TTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAA...ATATATGTCTATTTTAATAGACACTGACTGCTCCATGTCAGCCTGGATAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp CAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAGAGGTAGTTTCTCCAATAACTGTGTATTCTGTATaGGGCAACAACCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: QVISELDRSIKQEVVSPITVYSV*GNNPLN
Trigger: ATTGAGTGGGTTGTTGCCCAATACAGAATACACAGT...TATTGGAGAAACTACCTCTTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp TCGACTTCAACCTCATTGATTTCAGTCCCATCTGCATTGTTATATACAATTCGAACTGTGTATTCTGTATaGGGCAACAACCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: STSTSLISVPSALLYTIRTVYSV*GNNPLN
Trigger: ATTGAGTGGGTTGTTGCCCAATACAGAATACACAGT...TCGAATTGTATATAACAATGCAGATGGGACTGAAATCAATGAGGTTGAAGTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498051.6
ENST00000537875.2
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTTTCAACATGTTTGGCTaGGAGATTGGTAACACCCAA +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSFNMFG*EIGNTQ
Trigger: TTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAA...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ACACATGAAACCAGTTACCAAGTGATCTCAGAGTTGGACAGATCAATTAAACAAATCTCCCTGGAGATTTaGTTCACATCATCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: THETSYQVISELDRSIKQISLEI*FTSSCD
Trigger: ATCACAAGATGATGTGAACAAAATCTCCAGGGAGAT...TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTGGTAACTGGTTTCATGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TTAGGACTTGAGAGAGAAGATTCCAGAGTTCAATTTATTTTTCCCAATTCCTCTCAGTCAATAACCACTTaGACCAAAGTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: LGLEREDSRVQFIFPNSSQSITT*TKVSLT
Trigger: TGTCAGTGAGACTTTGGTCAAAGTGGTTATTGACTG...AGAGGAATTGGGAAAAATAAATTGAACTCTGGAATCTTCTCTCTCAAGTCCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAATTTCCTTTTTCTCCTTaGATACCAGTTAGACCTCGT +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREFPFSP*IPVRPR
Trigger: ACGAGGTCTAACTGGTATCAAAGGAGAAAAAGGAAA...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp ATATATGATTTGGTTAAGTTCCGATGTTATCACTCCATCATGTTTGGAGCAGAGTTTCCTTTTTCTCCTTaGATACCAGTTAGACCTCGT +
Preference number: 5 (lower is better)
Translates to: IYDLVKFRCYHSIMFGAEFPFSP*IPVRPR
Trigger: ACGAGGTCTAACTGGTATCAAAGGAGAAAAAGGAAA...CTCTGCTCCAAACATGATGGAGTGATAACATCGGAACTTAACCAAATCATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGAGCAATTGCTGGAGTTaGACAGACAAATTTCACTTC +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMSNCWS*TDKFHF
Trigger: GAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGACCAAAGGGAAATCATaGCTACCATGTCATAGATTA +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMTKGKS*LPCHRL
Trigger: TAATCTATGACATGGTAGCAATGATTTCCCTTTGGT...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp AACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAATCATTGCTACCATGCAAGTGATCTCAGAGTaGGACAGATCAATTAAACAA +
Preference number: 5 (lower is better)
Translates to: NKLSDMPLRHQREIIATMQVISE*DRSIKQ
Trigger: TTGTTTAATTGATCTGTCCAACTCTGAGATCACTTG...CATGGTAGCAATGATTTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS-3UTR CAA 90 bp TCTCTTCTCTGGAAAAACAAATTATCTGACATGCCATTAAGACACCAAAGGGAAGATCCTGCTTCTGGTTaGAAGCTATTTTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: SLLWKNKLSDMPLRHQREDPASG*KLFSKM
Trigger: CATTTTTGAAAATAGCTTCAAACCAGAAGCAGGATC...TTCCCTTTGGTGTCTTAATGGCATGTCAGATAATTTGTTTTTCCAGAGAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297848.8
CDS CAA 90 bp GAGGGCCATCTGGTCCCTTTGGACCCGGTTCACCTTGCTGGCCCTTaGGTCCTCGGAGTCCTGGACCACCTGGTGGGCCCGCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: EGHLVPLDPVHLAGP*VLGVLDHLVGPLVP
Trigger: TGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS GCA 72 bp AGACTGCAGGTCACCCCGCTCTCCTCGTTCCCCCTTTaGTCCAGGGACACCAGGTGGTCCCAGGGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: RLQVTPLSSFPL*SRDTRWSQGAL
Trigger: CAAGGCGCCCTGGGACCACCTGGTGTCCCTGGAGCAAAGGGGGAACGAGGAGAGCGGGGTGACCTGCAGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp TGGTCCCTTTGGACCCGGTTCACCTTGCTGGCCCTTTaGTCCTCGGAGTCCTGGACCACCTGGTGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: WSLWTRFTLLAL*SSESWTTWWAR
Trigger: GCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCAAAGGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp TCCGCGCCTAGGCAAGATCGAAGCTCCGCCGCTAGTTaGTCCTTGGCGGCGCACCGCCCTTGCTCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: SAPRQDRSSAAS*SLAAHRPCSLP
Trigger: GGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAGGCGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS TCA 72 bp GTGGTCCCAGGGCGCCTTGCGGTCCCATGCTTCCTGTaGTCCCTGGGACTCCAGGGGTGCCAGGAATGCCTA +
Preference number: 6 (lower is better)
Translates to: VVPGRLAVPCFL*SLGLQGCQECL
Trigger: TAGGCATTCCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGCATGGGACCGCAAGGCGCCCTGGGACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 72 bp TGGCCAGAAGGACCTTGGGGTCCAGGAACCCCCAGATaGCCTGGTGGGCCTCTTGGTCCAGGAGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: WPEGPWGPGTPR*PGGPLGPGEPG
Trigger: CCCTGGCTCTCCTGGACCAAGAGGCCCACCAGGTCATCTGGGGGTTCCTGGACCCCAAGGTCCTTCTGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000440844.5
CDS CCA 72 bp CAGGGCGCCTTGCGGTCCCATGCTTCCTGTGATCCCTaGGACTCCAGGGGTGCCAGGAATGCCTATTGGCCC +
Preference number: 6 (lower is better)
Translates to: QGALRSHASCDP*DSRGARNAYWP
Trigger: GGGCCAATAGGCATTCCTGGCACCCCTGGAGTCCCAGGGATCACAGGAAGCATGGGACCGCAAGGCGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp GCAGCCACCTGTGCTGGGCAAGGTTCCAGCCCAGGTTaGGAGCTCTCCGCGCCTAGGCAAGATCGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: AATCAGQGSSPG*ELSAPRQDRSS
Trigger: GGAGCTTCGATCTTGCCTAGGCGCGGAGAGCTCCCAACCTGGGCTGGAACCTTGCCCAGCACAGGTGGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS CAA 72 bp CCGAGGGCCATCTGGTCCCTTTGGACCCGGTTCACCTaGCTGGCCCTTTGGTCCTCGGAGTCCTGGACCACC +
Preference number: 6 (lower is better)
Translates to: PRAIWSLWTRFT*LALWSSESWTT
Trigger: GGTGGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 72 bp CCTAGGCAAGATCGAAGCTCCGCCGCTAGTTGGTCCTaGGCGGCGCACCGCCCTTGCTCTCTTCCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: PRQDRSSAASWS*AAHRPCSLPSE
Trigger: CTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS GCA 72 bp CGAGGGCCATCTGGTCCCTTTGGACCCGGTTCACCTTaGTGGCCCTTTGGTCCTCGGAGTCCTGGACCACCT +
Preference number: 6 (lower is better)
Translates to: RGPSGPFGPGSP*WPFGPRSPGPP
Trigger: AGGTGGTCCAGGACTCCGAGGACCAAAGGGCCAGCAAGGTGAACCGGGTCCAAAGGGACCAGATGGCCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS GCA 72 bp CCTCTCTCTCTTTCTCTCTCCCTCTCCTTCTGCCGCTaGGCTTCCACTTCCAGCCCCCTGGAGCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PLSLSLSLSFCR*ASTSSPLELPP
Trigger: CGGAGGCAGCTCCAGGGGGCTGGAAGTGGAAGCGCAGCGGCAGAAGGAGAGGGAGAGAGAAAGAGAGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp AGGGGTGCCAGGAATGCCTATTGGCCCTGGTGGTCCTaGAGGTCCCGAGGATCCATCCTTTCCCGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RGARNAYWPWWS*RSRGSILSRKA
Trigger: GGCCTTCCGGGAAAGGATGGATCCTCGGGACCTCCAGGACCACCAGGGCCAATAGGCATTCCTGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp CTAGGCAAGATCGAAGCTCCGCCGCTAGTTGGTCCTTaGCGGCGCACCGCCCTTGCTCTCTTCCCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: LGKIEAPPLVGP*RRTALALFPRS
Trigger: ACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS CAA 90 bp CTCTCCGCGCCTAGGCAAGATCGAAGCTCCGCCGCTAGTTGGTCCTaGGCGGCGCACCGCCCTTGCTCTCTTCCCTCGGAGTATCCTTTT +
Preference number: 6 (lower is better)
Translates to: LSAPRQDRSSAASWS*AAHRPCSLPSEYPF
Trigger: AAAAGGATACTCCGAGGGAAGAGAGCAAGGGCGGTGCGCCGCCAAGGACCAACTAGCGGCGGAGCTTCGATCTTGCCTAGGCGCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS CCA 72 bp TGGTCCTCGGAGTCCTGGACCACCTGGTGGGCCCGCTaGTCCCAGAGCCACTTCATTGGTTTCAGAACAGGA +
Preference number: 6 (lower is better)
Translates to: WSSESWTTWWAR*SQSHFIGFRTG
Trigger: TCCTGTTCTGAAACCAATGAAGTGGCTCTGGGACCAGCGGGCCCACCAGGTGGTCCAGGACTCCGAGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp CCAGGAGGCCCTTGGACAGTCCGGATGGATGAGGAGTaGCTGGGAATCTGGTTGAGGATGGCAGTGTACCTG +
Preference number: 6 (lower is better)
Translates to: PGGPWTVRMDEE*LGIWLRMAVYL
Trigger: CAGGTACACTGCCATCCTCAACCAGATTCCCAGCCACTCCTCATCCATCCGGACTGTCCAAGGGCCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 72 bp CCGAGGATGGTAAGGTTTTTCCAGGAGCGGAGACGCTaGCGCCTTCGCCATCCGTGTAGATGGGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: PRMVRFFQERRR*RLRHPCRWESL
Trigger: CAGTGACTCCCATCTACACGGATGGCGAAGGCGTCAGCGTCTCCGCTCCTGGAAAAACCTTACCATCCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp GCTGTTCGCATACTTGACGCGCCACTGATCTCACCATaGCTTGAGACTGCAGGTCACCCCGCTCTCCTCGTT +
Preference number: 6 (lower is better)
Translates to: AVRILDAPLISP*LETAGHPALLV
Trigger: AACGAGGAGAGCGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 72 bp ACTCTGGATGAGCTGTTCGCATACTTGACGCGCCACTaGTCTCACCATGGCTTGAGACTGCAGGTCACCCCG +
Preference number: 6 (lower is better)
Translates to: TLDELFAYLTRH*SHHGLRLQVTP
Trigger: CGGGGTGACCTGCAGTCTCAAGCCATGGTGAGATCAGTGGCGCGTCAAGTATGCGAACAGCTCATCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 72 bp CAGTCCGGATGGATGAGGAGTGGCTGGGAATCTGGTTaGGGATGGCAGTGTACCTGGCCATGTGACTCTGGA +
Preference number: 6 (lower is better)
Translates to: QSGWMRSGWESG*GWQCTWPCDSG
Trigger: TCCAGAGTCACATGGCCAGGTACACTGCCATCCTCAACCAGATTCCCAGCCACTCCTCATCCATCCGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp CATGGCTTCCAGCTCATCTTGGACAGGGGTGAACTCTaGCTGATCTGGATGGGGAGCTCTCACACCATAGGC +
Preference number: 6 (lower is better)
Translates to: HGFQLILDRGEL*LIWMGSSHTIG
Trigger: GCCTATGGTGTGAGAGCTCCCCATCCAGATCAGCCAGAGTTCACCCCTGTCCAAGATGAGCTGGAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000247781.4
ENST00000297848.8
CDS CCA 72 bp AACCGGTTATACCATTCCTCGGACACCCGCAAGTTCTaGGGCCCCGAGGATGGTAAGGTTTTTCCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: NRLYHSSDTRKF*GPEDGKVFPGA
Trigger: CGCTCCTGGAAAAACCTTACCATCCTCGGGGCCCCAGAACTTGCGGGTGTCCGAGGAATGGTATAACCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp CTCCTTTTTCTCCTGGCATTCCGGGCATTCCTTGAATaGACAGACCACTTGGTCCTTGAGGTCCAGGTGGAC +
Preference number: 6 (lower is better)
Translates to: LLFLLAFRAFLE*TDHLVLEVQVD
Trigger: GTCCACCTGGACCTCAAGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGAATGCCAGGAGAAAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 90 bp TCCAGGCACCATAACCGTTCCTATGACTTCTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCACCCTAAACTGCTGCACATCGCTGTC +
Preference number: 6 (lower is better)
Translates to: SRHHNRSYDFFLRVP*SCHVGHPKLLHIAV
Trigger: GACAGCGATGTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAAGTCATAGGAACGGTTATGGTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS TCA 72 bp GTGTGCATCAGATCGAATTCGGCAACATTGTACACATaGGTGCTGTCTGGTTCAGAGGCGATCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VCIRSNSATLYT*VLSGSEAISCS
Trigger: GCTGCAGGAGATCGCCTCTGAACCAGACAGCACTCATGTGTACAATGTTGCCGAATTCGATCTGATGCACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS TCA 72 bp AGAACAATGTTTTCACCATGCCTGTCAGGGCGTCGCTaGAGCCTGAGGCCTGGGAGGCAAATATCTTCACAT +
Preference number: 6 (lower is better)
Translates to: RTMFSPCLSGRR*SLRPGRQISSH
Trigger: ATGTGAAGATATTTGCCTCCCAGGCCTCAGGCTTCAGCGACGCCCTGACAGGCATGGTGAAAACATTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS GCA 72 bp AAAGGCGTCAAAGTCATCCACAAAGAAGACATGGCGTaGGCTGGGCTTACTGCCAATGCTAACCAACTCCGA +
Preference number: 6 (lower is better)
Translates to: KGVKVIHKEDMA*AGLTANANQLR
Trigger: TCGGAGTTGGTTAGCATTGGCAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 72 bp CAGAATCAGGCTGAAGTCCATAGAAGCAATGCCTGGTaGTCCCTCCACCCACAGTGGATTCTTGCTTTTGCC +
Preference number: 6 (lower is better)
Translates to: QNQAEVHRSNAW*SLHPQWILAFA
Trigger: GGCAAAAGCAAGAATCCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATGGACTTCAGCCTGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 72 bp CATAACCGTTCCTATGACTTCTTCCTCAGGGTCCCCTaGAGCTGTCATGTAGGTCACCCTAAACTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: HNRSYDFFLRVP*SCHVGHPKLLH
Trigger: GTGCAGCAGTTTAGGGTGACCTACATGACAGCTCAAGGGGACCCTGAGGAAGAAGTCATAGGAACGGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS TCA 72 bp CCTGTGGAGTGTCAGGAAGAATCCGGAATAGAAAACTaGTTGTGTAGTCGGAGGGCAATCCTTCTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: PVECQEESGIEN*LCSRRAILLGA
Trigger: TGCACCCAGAAGGATTGCCCTCCGACTACACAATCAGTTTTCTATTCCGGATTCTTCCTGACACTCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS GCA 72 bp CAATGCCTGGTTGTCCCTCCACCCACAGTGGATTCTTaGTTTTGCCTATCCTGGAGGGATTCTATAACAACC +
Preference number: 6 (lower is better)
Translates to: QCLVVPPPTVDS*FCLSWRDSITT
Trigger: GGTTGTTATAGAATCCCTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGACAACCAGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp GTATCAGGAAGCAGAGGCTTCAGAAGGAGGTTGTTCTaGCTTCCAGGCACCATAACCGTTCCTATGACTTCT +
Preference number: 6 (lower is better)
Translates to: VSGSRGFRRRLF*LPGTITVPMTS
Trigger: AGAAGTCATAGGAACGGTTATGGTGCCTGGAAGCCAGAACAACCTCCTTCTGAAGCCTCTGCTTCCTGATAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp TTTGTAGACAATTCTATAGCCTTTCACCGGGGAAGATaGGGGGTCCCACGTAATGCGCAACCGGTTATACCA +
Preference number: 6 (lower is better)
Translates to: FVDNSIAFHRGR*GVPRNAQPVIP
Trigger: TGGTATAACCGGTTGCGCATTACGTGGGACCCCCCATCTTCCCCGGTGAAAGGCTATAGAATTGTCTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 72 bp GCAATGCCTGGTTGTCCCTCCACCCACAGTGGATTCTaGCTTTTGCCTATCCTGGAGGGATTCTATAACAAC +
Preference number: 6 (lower is better)
Translates to: AMPGCPSTHSGF*LLPILEGFYNN
Trigger: GTTGTTATAGAATCCCTCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGACAACCAGGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 72 bp CTCCAGGATCCATCCACCATAAATACCAGGTCAGCCTaGGCCGCCTTACATACTTCTTTTGCTGGTGGAATG +
Preference number: 6 (lower is better)
Translates to: LQDPSTINTRSA*AALHTSFAGGM
Trigger: CATTCCACCAGCAAAAGAAGTATGTAAGGCGGCCAAGGCTGACCTGGTATTTATGGTGGATGGATCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
CDS GCA 72 bp GGGCTTACTGCCAATGCTAACCAACTCCGAGTAATCTaGATCGGCCACACCAATTGCAAAAATGCTATAGCC +
Preference number: 6 (lower is better)
Translates to: GLTANANQLRVI*IGHTNCKNAIA
Trigger: GGCTATAGCATTTTTGCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp TTCTTAAAGGCGTCAAAGTCATCCACAAAGAAGACATaGCGTGCGCTGGGCTTACTGCCAATGCTAACCAAC +
Preference number: 6 (lower is better)
Translates to: FLKASKSSTKKT*RALGLLPMLTN
Trigger: GTTGGTTAGCATTGGCAGTAAGCCCAGCGCACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CCA 72 bp ATCGAATTCGGCAACATTGTACACATGAGTGCTGTCTaGTTCAGAGGCGATCTCCTGCAGCTCATTCACATC +
Preference number: 6 (lower is better)
Translates to: IEFGNIVHMSAV*FRGDLLQLIHI
Trigger: GATGTGAATGAGCTGCAGGAGATCGCCTCTGAACCAGACAGCACTCATGTGTACAATGTTGCCGAATTCGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS CCA 72 bp GTTGACAGGACAGTTCTGTATCCACAGCTAAATGTCTaGGGCCAATGGAACCAGAGTGGAGGATTTCCACTT +
Preference number: 6 (lower is better)
Translates to: VDRTVLYPQLNV*GQWNQSGGFPL
Trigger: AAGTGGAAATCCTCCACTCTGGTTCCATTGGCCCCAGACATTTAGCTGTGGATACAGAACTGTCCTGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309791.8
CDS CAA 72 bp GTAACTGGAACGGTGCAGAGTTTCCACCTGGTCCTCTaGATCGAACCATTTTCCCTAGCACTTCTACACCAT +
Preference number: 6 (lower is better)
Translates to: VTGTVQSFHLVL*IEPFSLALLHH
Trigger: ATGGTGTAGAAGTGCTAGGGAAAATGGTTCGATCAAGAGGACCAGGTGGAAACTCTGCACCGTTCCAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 72 bp TATTCAGTATCAGGAAGCAGAGGCTTCAGAAGGAGGTaGTTCTGGCTTCCAGGCACCATAACCGTTCCTATG +
Preference number: 6 (lower is better)
Translates to: YSVSGSRGFRRR*FWLPGTITVPM
Trigger: CATAGGAACGGTTATGGTGCCTGGAAGCCAGAACAACCTCCTTCTGAAGCCTCTGCTTCCTGATACTGAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 90 bp GTGACTTTGTATTCAGTATCAGGAAGCAGAGGCTTCAGAAGGAGGTaGTTCTGGCTTCCAGGCACCATAACCGTTCCTATGACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: VTLYSVSGSRGFRRR*FWLPGTITVPMTSS
Trigger: GGAAGAAGTCATAGGAACGGTTATGGTGCCTGGAAGCCAGAACAACCTCCTTCTGAAGCCTCTGCTTCCTGATACTGAATACAAAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 90 bp TACCTGCCAGTGGGCACACAAGCTGGTCATTTCAACATGTTTGGCTaGGAGATTGGTAACACCCAAGAACAATGTTTTCACCATGCCTGT +
Preference number: 6 (lower is better)
Translates to: YLPVGTQAGHFNMFG*EIGNTQEQCFHHAC
Trigger: ACAGGCATGGTGAAAACATTGTTCTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAAATGACCAGCTTGTGTGCCCACTGGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 90 bp CGATGTACCTGCCAGTGGGCACACAAGCTGGTCATTTCAACATGTTaGGCTTGGAGATTGGTAACACCCAAGAACAATGTTTTCACCATG +
Preference number: 6 (lower is better)
Translates to: RCTCQWAHKLVISTC*AWRLVTPKNNVFTM
Trigger: CATGGTGAAAACATTGTTCTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAAATGACCAGCTTGTGTGCCCACTGGCAGGTACATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp ATTCAGAATCAGGCTGAAGTCCATAGAAGCAATGCCTaGTTGTCCCTCCACCCACAGTGGATTCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: IQNQAEVHRSNA*LSLHPQWILAF
Trigger: AAAAGCAAGAATCCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATGGACTTCAGCCTGATTCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CCA 72 bp GCAGATGCTCTTAGGAACAGTATAGTTCAGCATGACTaGGGAGGCCTCAGGAAACTTAAAATCATGGCCGAT +
Preference number: 6 (lower is better)
Translates to: ADALRNSIVQHD*GGLRKLKIMAD
Trigger: ATCGGCCATGATTTTAAGTTTCCTGAGGCCTCCCCAGTCATGCTGAACTATACTGTTCCTAAGAGCATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498051.6
CDS CAA 90 bp TTTTATATTCAGAATCAGGCTGAAGTCCATAGAAGCAATGCCTGGTaGTCCCTCCACCCACAGTGGATTCTTGCTTTTGCCTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: FYIQNQAEVHRSNAW*SLHPQWILAFAYPG
Trigger: TCCAGGATAGGCAAAAGCAAGAATCCACTGTGGGTGGAGGGACAACCAGGCATTGCTTCTATGGACTTCAGCCTGATTCTGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS TCA 72 bp AACCACGATAACCTTTGGGATGCCCCTTCTTGTACCTaGCTCTGCAGTGAACAAGGTATCTCGAACATACTT +
Preference number: 6 (lower is better)
Translates to: NHDNLWDAPSCT*LCSEQGISNIL
Trigger: AAGTATGTTCGAGATACCTTGTTCACTGCAGAGTCAGGTACAAGAAGGGGCATCCCAAAGGTTATCGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS TCA 72 bp ACCACTATACTGTGCAAGACCAATTCGTGTCTTCTCTaGGCCCACATCGAATGCTGTAACCAGGTTTTCCAA +
Preference number: 6 (lower is better)
Translates to: TTILCKTNSCLL*AHIECCNQVFQ
Trigger: TTGGAAAACCTGGTTACAGCATTCGATGTGGGCTCAGAGAAGACACGAATTGGTCTTGCACAGTATAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS CAA 72 bp TGCCAGTGGGCACACAAGCTGGTCATTTCAACATGTTaGGCTTGGAGATTGGTAACACCCAAGAACAATGTT +
Preference number: 6 (lower is better)
Translates to: CQWAHKLVISTC*AWRLVTPKNNV
Trigger: AACATTGTTCTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAAATGACCAGCTTGTGTGCCCACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 72 bp TCCATCATCTTAAATCCTGCAAGATCAATGCCATCCTaGTGTACCACTGGACAGGTTGCTGATGCTGTTTCG +
Preference number: 6 (lower is better)
Translates to: SIILNPARSMPS*CTTGQVADAVS
Trigger: CGAAACAGCATCAGCAACCTGTCCAGTGGTACACAAGGATGGCATTGATCTTGCAGGATTTAAGATGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 72 bp TTAGCTGATGCGTTCATTGCCTTCTCACCCACTTGCTaGCAGTCAATAACCACTTTGACCAAAGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: LADAFIAFSPTC*QSITTLTKVSL
Trigger: CAGTGAGACTTTGGTCAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCAATGAACGCATCAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 72 bp ACCAGGTTTTCCAAGAAATGCCGAACCAGTCTGAAGTaGAATCTTCCAATACTCCATGAACCATCGACCAGG +
Preference number: 6 (lower is better)
Translates to: TRFSKKCRTSLK*NLPILHEPSTR
Trigger: CCTGGTCGATGGTTCATGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCATTTCTTGGAAAACCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS CAA 90 bp GACGTGATATTAGCTGATGCGTTCATTGCCTTCTCACCCACTTGCTaGCAGTCAATAACCACTTTGACCAAAGTCTCACTGACAACAATG +
Preference number: 6 (lower is better)
Translates to: DVILADAFIAFSPTC*QSITTLTKVSLTTM
Trigger: CATTGTTGTCAGTGAGACTTTGGTCAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCAATGAACGCATCAGCTAATATCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 90 bp CTTGAAGTTGGGTCCCAGGTTAATCGAGCACTGTTAGAGCCAACATaGGAGATTCTCAGGTTTCTTGGTGGACTTAAAGCCAATGTTGTT +
Preference number: 6 (lower is better)
Translates to: LEVGSQVNRALLEPT*EILRFLGGLKANVV
Trigger: AACAACATTGGCTTTAAGTCCACCAAGAAACCTGAGAATCTCCAATGTTGGCTCTAACAGTGCTCGATTAACCTGGGACCCAACTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
ENST00000523142.5
CDS TCA 72 bp CCGAACCAGTCTGAAGTTGAATCTTCCAATACTCCATaGACCATCGACCAGGATTACAATGTCAGCAATTGC +
Preference number: 6 (lower is better)
Translates to: PNQSEVESSNTP*TIDQDYNVSNC
Trigger: GCAATTGCTGACATTGTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS GCA 72 bp CCCACATCGAATGCTGTAACCAGGTTTTCCAAGAAATaGCGAACCAGTCTGAAGTTGAATCTTCCAATACTC +
Preference number: 6 (lower is better)
Translates to: PTSNAVTRFSKK*RTSLKLNLPIL
Trigger: GAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCATTTCTTGGAAAACCTGGTTACAGCATTCGATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS TCA 72 bp TCCGTGTGTACTCGATGTTTAGCTCCCACTTCTAAGTaGGAGCATGCAGTATTTGGTTTCATGTTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: SVCTRCLAPTSK*EHAVFGFMFLC
Trigger: ACACAGAAACATGAAACCAAATACTGCATGCTCTCACTTAGAAGTGGGAGCTAAACATCGAGTACACACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432943.6
CDS GCA 72 bp ATATTAGCTGATGCGTTCATTGCCTTCTCACCCACTTaGTTGCAGTCAATAACCACTTTGACCAAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: ILADAFIAFSPT*LQSITTLTKVS
Trigger: TGAGACTTTGGTCAAAGTGGTTATTGACTGCAAGCAAGTGGGTGAGAAGGCAATGAACGCATCAGCTAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS GCA 72 bp ATGTTTGTTACTGTGAATAGTGTTGGGTTCCATCTGTaGCAATCTTGTTCAGGGCTCCAACAGTGCTGTATA +
Preference number: 6 (lower is better)
Translates to: MFVTVNSVGFHL*QSCSGLQQCCI
Trigger: TATACAGCACTGTTGGAGCCCTGAACAAGATTGGCACAGATGGAACCCAACACTATTCACAGTAACAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432943.6
CDS CAA 72 bp CACAAGCTGGTCATTTCAACATGTTTGGCTTGGAGATaGGTAACACCCAAGAACAATGTTTTCACCATGCCT +
Preference number: 6 (lower is better)
Translates to: HKLVISTCLAWR*VTPKNNVFTMP
Trigger: AGGCATGGTGAAAACATTGTTCTTGGGTGTTACCAATCTCCAAGCCAAACATGTTGAAATGACCAGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000434620.5
CDS CAA 90 bp AATGCTGTAACCAGGTTTTCCAAGAAATGCCGAACCAGTCTGAAGTaGAATCTTCCAATACTCCATGAACCATCGACCAGGATTACAATG +
Preference number: 6 (lower is better)
Translates to: NAVTRFSKKCRTSLK*NLPILHEPSTRITM
Trigger: CATTGTAATCCTGGTCGATGGTTCATGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCATTTCTTGGAAAACCTGGTTACAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000523142.5
ENST00000537875.2
CDS TCA 72 bp TCGACCAGGATTACAATGTCAGCAATTGCTGGAGTTTaGCAGACAAATTTCACTTCTTCTGGTGAAGATGGT +
Preference number: 6 (lower is better)
Translates to: STRITMSAIAGV*QTNFTSSGEDG
Trigger: ACCATCTTCACCAGAAGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAATCCTGGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS CAA 72 bp GTATACTGTCATGAGATATTACATTATATCTTAACCTaGTGGGTGGAGCCACTTGACCTTGGACAATGGTGC +
Preference number: 6 (lower is better)
Translates to: VYCHEILHYILT*WVEPLDLGQWC
Trigger: GCACCATTGTCCAAGGTCAAGTGGCTCCACCCACAAGGTTAAGATATAATGTAATATCTCATGACAGTATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS CAA 72 bp TCCATGAACCATCGACCAGGATTACAATGTCAGCAATaGCTGGAGTTTGACAGACAAATTTCACTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: SMNHRPGLQCQQ*LEFDRQISLLL
Trigger: CAGAAGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAATCCTGGTCGATGGTTCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS CAA 72 bp AGCATGCAGTATTTGGTTTCATGTTTCTGTGTTAATTaGCACAAGATAATGGCTTCCAGAGGCACCCGTGTT +
Preference number: 6 (lower is better)
Translates to: SMQYLVSCFCVN*HKIMASRGTRV
Trigger: AACACGGGTGCCTCTGGAAGCCATTATCTTGTGCAAATTAACACAGAAACATGAAACCAAATACTGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432943.6
CDS CAA 90 bp TTCCAATACTCCATGAACCATCGACCAGGATTACAATGTCAGCAATaGCTGGAGTTTGACAGACAAATTTCACTTCTTCTGGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: FQYSMNHRPGLQCQQ*LEFDRQISLLLVKM
Trigger: CATCTTCACCAGAAGAAGTGAAATTTGTCTGTCAAACTCCAGCAATTGCTGACATTGTAATCCTGGTCGATGGTTCATGGAGTATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2
CDS TCA 72 bp TTTAGTTTAAATTCTGTTCTGGGATCATCAGTGAACTaGACCATTGCAACTTGGGTTCCATCTGTGCCAATC +
Preference number: 6 (lower is better)
Translates to: FSLNSVLGSSVN*TIATWVPSVPI
Trigger: GATTGGCACAGATGGAACCCAAGTTGCAATGGTTCAGTTCACTGATGATCCCAGAACAGAATTTAAACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000247781.4
ENST00000297848.8
ENST00000309791.8
CDS CAA 90 bp GTATGCAATAATTTGAACTGTGTAATTCTGGTCTGGCATAAGGCCTaGAATAATTGCTTTAGTTGCAGTGTTCTGCAGATTCAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: VCNNLNCVILVWHKA*NNCFSCSVLQIQLV
Trigger: AACCAGCTGAATCTGCAGAACACTGCAACTAAAGCAATTATTCAAGGCCTTATGCCAGACCAGAATTACACAGTTCAAATTATTGCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297848.8
ENST00000309791.8
ENST00000432943.6
ENST00000498051.6
ENST00000537875.2