RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000149972

Ensembl transcript IDs: ENST00000279463.7, ENST00000418526.6, ENST00000524560.1, ENST00000524871.6, ENST00000525047.1, ENST00000525236.1, ENST00000527185.5, ENST00000527682.1, ENST00000528682.5, ENST00000528727.5, ENST00000619298.1

Found 818 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GGGAGAGCTCATGTTTTGCCAGCTAAACAATTAGCATCCCTGTTTTaGCAAAGTCCAGCCTCTCCCACTTTAAAGGAGGCGTTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: GRAHVLPAKQLASLF*QSPASPTLKEAFKK
Trigger: TTTCTTGAACGCCTCCTTTAAAGTGGGAGAGGCTGGACTTTGCAAAAACAGGGATGCTAATTGTTTAGCTGGCAAAACATGAGCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGACTACTCACAATCTaGTATTCTCTGCGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRLLTI*YSLRRL
Trigger: TAGCCTCCGCAGAGAATAGCAGATTGTGAGTAGTCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
3UTR-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTCTGTTGAAATTCTaGGGTGTCACCAAAACCTCT +
Preference number: 2 (lower is better)
Translates to: QARQEQEQELCEKPNLVIILLKF*GVTKTS
Trigger: AGAGGTTTTGGTGACACCTCAGAATTTCAACAGAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
3UTR-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCTAAGAAATTCTGTTaGAATTCTGAGGTGTCACCA +
Preference number: 2 (lower is better)
Translates to: QARQEQEQELCEKPNLVISKKFC*NSEVSP
Trigger: TGGTGACACCTCAGAATTTCAACAGAATTTCTTAGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
3UTR-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 2 (lower is better)
Translates to: QYTELLFDCAFHTVYALYLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 2 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
3UTR-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATAATGGACCACATCACTaGAGCATTTTTCATATGTCC +
Preference number: 2 (lower is better)
Translates to: QYTELLFDCAFHTVYALYNGPHH*SIFHMS
Trigger: GGACATATGAAAAATGCTTCAGTGATGTGGTCCATT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR CAA 90 bp ATTTTGCAATTAGAAGAAAACCTTGGACCTAATTCAACATCTGTTTaGGCAGTAGGTAAAGAAATGGAAACGCTCTGTCCCATATTCATC +
Preference number: 2 (lower is better)
Translates to: ILQLEENLGPNSTSV*AVGKEMETLCPIFI
Trigger: GATGAATATGGGACAGAGCGTTTCCATTTCTTTACCTACTGCCAAAACAGATGTTGAATTAGGTCCAAGGTTTTCTTCTAATTGCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR CAA 90 bp AGAACAGAAACTTCAATCACTTCTCTGATTCTACAAGGATTAACCTaGAGAGCTAGCAATTTGAGCTCCATATTGTTTCATTTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: RTETSITSLILQGLT*RASNLSSILFHFAC
Trigger: ACAAGCAAAATGAAACAATATGGAGCTCAAATTGCTAGCTCTCAAGGTTAATCCTTGTAGAATCAGAGAAGTGATTGAAGTTTCTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR CCA 72 bp CTTTTAGACATTATCCCCCTAATTCCTCTCCATGACTaGCCAAGCAAGGCAAGAACAAGAACAAGAGCTGTG +
Preference number: 3 (lower is better)
Translates to: LLDIIPLIPLHD*PSKARTRTRAV
Trigger: CACAGCTCTTGTTCTTGTTCTTGCCTTGCTTGGCCAGTCATGGAGAGGAATTAGGGGGATAATGTCTAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527185.5
3UTR CCA 72 bp ACAGATCTGCTAAAGGCCAGTTACTTAACAAATGGATaGCACACACTCGGAGTCATCAGATATAAAATAAAA +
Preference number: 3 (lower is better)
Translates to: TDLLKASYLTNG*HTLGVIRYKIK
Trigger: TTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAGCAGATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
3UTR CCA 72 bp ATACAGATCGTACACAATATATTTAACAGTTTGACATaGGGTCCACAGTACCTTCATTTGGGTATGCAAAAC +
Preference number: 3 (lower is better)
Translates to: IQIVHNIFNSLT*GPQYLHLGMQN
Trigger: GTTTTGCATACCCAAATGAAGGTACTGTGGACCCCATGTCAAACTGTTAAATATATTGTGTACGATCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR TCA 72 bp ATGACTTGCTCTAGGGGTGCATATAGAATAGCATATTaGCAAATCTTGCTATTTCACTATGCAATCATACAA +
Preference number: 3 (lower is better)
Translates to: MTCSRGAYRIAY*QILLFHYAIIQ
Trigger: TTGTATGATTGCATAGTGAAATAGCAAGATTTGTCAATATGCTATTCTATATGCACCCCTAGAGCAAGTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR CCA 72 bp TATTATCATTTGCTGAGATTTAATGATGAACAAACATaGTCCCTGAAGCATGGATTGGGAGAAACAGAAATA +
Preference number: 3 (lower is better)
Translates to: YYHLLRFNDEQT*SLKHGLGETEI
Trigger: TATTTCTGTTTCTCCCAATCCATGCTTCAGGGACCATGTTTGTTCATCATTAAATCTCAGCAAATGATAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLRWLMV*RVPSPE
Trigger: CTCTGGGCTGGGAACCCGTCATACCATTAGCCAACG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCTGCCCCTAGCCAGCTaGGTGAAGAAGCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLLPLAS*VKKHSV
Trigger: CACTGAGTGCTTCTTCACCCAGCTGGCTAGGGGCAG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGGTCCTTTGCAGCCTGTaGCAGAGGCGAATTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLVLCSL*QRRIAE
Trigger: CTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGAC...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTACGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLRWLMV*RVPSPE
Trigger: CTCTGGGCTGGGAACCCGTCATACCATTAGCCAACG...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACTGCCCCTAGCCAGCTaGGTGAAGAAGCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLLPLAS*VKKHSV
Trigger: CACTGAGTGCTTCTTCACCCAGCTGGCTAGGGGCAG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTGGTTGTCAGCTGCTaGGCTCCAGGACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVVVSC*APGQCG
Trigger: GCCACACTGTCCTGGAGCCCAGCAGCTGACAACCAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLLWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTTCCAGCACCGCCTaGGATTTCCGCAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIISSTA*DFRRRA
Trigger: GGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAATTTCCAGCACCGCCTaGGATTTCCGCAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSISSTA*DFRRRA
Trigger: GGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAAT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATTTCCAGCACCGCCTaGGATTTCCGCAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFISSTA*DFRRRA
Trigger: GGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAAT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKATHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLTHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCTGTGGTCTGTACCCTaGAGCCATATCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLLWSVP*SHISQH
Trigger: ATGCTGGGAGATATGGCTGCAGGGTACAGACCACAG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCCTGTGGTCTGTACCCTaGAGCCATATCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSLWSVP*SHISQH
Trigger: ATGCTGGGAGATATGGCTGCAGGGTACAGACCACAG...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCCAGGGAAAATGGGCTaGGAGCTTGAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLPGKMG*ELEGCR
Trigger: CCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATCCTCCAGCTTGCCCTaGCTCTCGCAGCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKSSSLP*LSQQTG
Trigger: TCCCGTCTGCTGCGAGAGGCAGGGCAAGCTGGAGGA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR GCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGGGAATCCTCCAGCTTaGCCTGCCTCTCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYGNPPA*PASRSR
Trigger: TCTGCTGCGAGAGGCAGGGCAAGCTGGAGGATTCCC...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTGTCTCCCATCCTCCTaGCCATCAGCACAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSCLPSS*PSAQFR
Trigger: TCTGAACTGTGCTGATGGGCAGGAGGATGGGAGACA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTGCCCCTAGCCAGCTaGGTGAAGAAGCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSLPLAS*VKKHSV
Trigger: CACTGAGTGCTTCTTCACCCAGCTGGCTAGGGGCAG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTGCCCCTAGCCAGCTaGGTGAAGAAGCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILPLAS*VKKHSV
Trigger: CACTGAGTGCTTCTTCACCCAGCTGGCTAGGGGCAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSTHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHNYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGTGGTTGTCAGCTGCTaGGCTCCAGGACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLVVVSC*APGQCG
Trigger: GCCACACTGTCCTGGAGCCCAGCAGCTGACAACCAC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHLGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSADHSR*GAWISC
Trigger: ACAGGAGATCCAAGCACCCCATCTCGAATGATCCGC...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTACTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLLWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGGCTTTAATGGCACTTTaGCTGCCGCCTTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLALMAL*LPPSRS
Trigger: ACTGCGAGAAGGCGGCAGCCAAAGTGCCATTAAAGC...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTRMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVITHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGAGGTTGCTAGGTGCTTaGCTAGGAGGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLRLLGA*LGGDFL
Trigger: CAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHDVERE*RVDCAL
Trigger: AAGTGCACAGTCGACCCTTCACTCTCTCTCCACATC...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLDVERE*RVDCAL
Trigger: AAGTGCACAGTCGACCCTTCACTCTCTCTCCACATC...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCGCTGAATCCCTGTACTaGTGCCATGTTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSAESLY*CHVSTA
Trigger: AGCTGTGGAAACATGGCATCAGTACAGGGATTCAGC...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTGTGGTCTGTACCCTaGAGCCATATCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHLWSVP*SHISQH
Trigger: ATGCTGGGAGATATGGCTGCAGGGTACAGACCACAG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCAGGGAAAATGGGCTaGGAGCTTGAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHPGKMG*ELEGCR
Trigger: CCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACCAGGGAAAATGGGCTaGGAGCTTGAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAPGKMG*ELEGCR
Trigger: CCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSSFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHTHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSNYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVINYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGTGGTTGTCAGCTGCTaGGCTCCAGGACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKVVVSC*APGQCG
Trigger: GCCACACTGTCCTGGAGCCCAGCAGCTGACAACCAC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAGTGGTTGTCAGCTGCTaGGCTCCAGGACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTVVVSC*APGQCG
Trigger: GCCACACTGTCCTGGAGCCCAGCAGCTGACAACCAC...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLSRWGA*ISCPNR
Trigger: CCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCATCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKASRWGA*ISCPNR
Trigger: CCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLADHSR*GAWISC
Trigger: ACAGGAGATCCAAGCACCCCATCTCGAATGATCCGC...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCACTTCACTGCTAGGTaGCCCATATCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTHFTAR*PISSSI
Trigger: AATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTG...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAATAGATGATCTCTGGTaGATGTGGCGGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAIDDLW*MWRRRA
Trigger: TGCTCTCCTCCGCCACATTCACCAGAGATCATCTAT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAATAGATGATCTCTGGTaGATGTGGCGGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLIDDLW*MWRRRA
Trigger: TGCTCTCCTCCGCCACATTCACCAGAGATCATCTAT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTATTTCCAGCACCGCCTaGGATTTCCGCAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFISSTA*DFRRRA
Trigger: GGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAAT...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGGGGGTTTGCACTCTATaGCAACTTCTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLGVCTL*QLLGLW
Trigger: CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCC...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLKFCLI*HTVCCG
Trigger: ACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYTHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDRWLMV*RVPSPE
Trigger: CTCTGGGCTGGGAACCCGTCATACCATTAGCCAACG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAMPRAR*LMTKMW
Trigger: CCACATCTTCGTCATCAGTCACCTTGCTCTTGGCAT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHMPRAR*LMTKMW
Trigger: CCACATCTTCGTCATCAGTCACCTTGCTCTTGGCAT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTGTGGTCTGTACCCTaGAGCCATATCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILWSVP*SHISQH
Trigger: ATGCTGGGAGATATGGCTGCAGGGTACAGACCACAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCAGGGAAAATGGGCTaGGAGCTTGAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPGKMG*ELEGCR
Trigger: CCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSTVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHSFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSGFLGG*THFTAR
Trigger: CCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACCTGAGGTTGCTAGGTaGTTGACTAGGAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAPEVAR*LTRRGF
Trigger: AAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGTGAAGGGTCGACTGTaGACTTGTGATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTVKGRL*TCDFST
Trigger: GGTGGAAAAATCACAAGTGCACAGTCGACCCTTCAC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTGTCTCCCATCCTCCTaGCCATCAGCACAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVICLPSS*PSAQFR
Trigger: TCTGAACTGTGCTGATGGGCAGGAGGATGGGAGACA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACGAGTGCCCAATAAGATaGCAGACTCCACTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHECPIR*QTPLSF
Trigger: GAAGGACAGTGGAGTCTGGCATCTTATTGGGCACTC...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528682.5
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGAAGCCATCTGTAACTaGGAACTGGATTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTEAICN*ELDCHE
Trigger: TTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACATCCATGTGATTGTTaGAACGGGGTTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAHPCDC*NGVAKC
Trigger: GCACTTGGCAACCCCGTTCCAACAATCACATGGATG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLRDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHLPRDG*FWRALG
Trigger: CCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVITHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYNYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGTGGTTGTCAGCTGCTaGGCTCCAGGACAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKVVVSC*APGQCG
Trigger: GCCACACTGTCCTGGAGCCCAGCAGCTGACAACCAC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATCCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYLGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISRWGA*ISCPNR
Trigger: CCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIADHSR*GAWISC
Trigger: ACAGGAGATCCAAGCACCCCATCTCGAATGATCCGC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACACTTCACTGCTAGGTaGCCCATATCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLHFTAR*PISSSI
Trigger: AATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACTGATGACGAAGATGTaGAGAGAGAGTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLLMTKM*RESEGS
Trigger: CGACCCTTCACTCTCTCTCCACATCTTCGTCATCAG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTGATGACGAAGATGTaGAGAGAGAGTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHLMTKM*RESEGS
Trigger: CGACCCTTCACTCTCTCTCCACATCTTCGTCATCAG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATAGATGATCTCTGGTaGATGTGGCGGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIDDLW*MWRRRA
Trigger: TGCTCTCCTCCGCCACATTCACCAGAGATCATCTAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAATTTCCAGCACCGCCTaGGATTTCCGCAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKISSTA*DFRRRA
Trigger: GGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAAT...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAACCCTACTCTGAGGTaGGAGGGGTACTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVINPTLR*EGYSIL
Trigger: AAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAACCCTACTCTGAGGTaGGAGGGGTACTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSNPTLR*EGYSIL
Trigger: AAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKFCLI*HTVCCG
Trigger: ACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGTCCACAGCCATGGCTaGCTCCATGTCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKVHSHG*LHVPCY
Trigger: ATAACAGGGGACATGGAGTCAGCCATGGCTGTGGAC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGTGTTCCATTGGGTCTaGAAGCCACAATATAGCCGA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAVFHWV*KPQYSR
Trigger: TCGGCTATATTGTGGCTTTCAGACCCAATGGAACAC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFTHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAGGTTGCTAGGTGCTTaGCTAGGAGGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSRLLGA*LGGDFL
Trigger: CAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKRWLMV*RVPSPE
Trigger: CTCTGGGCTGGGAACCCGTCATACCATTAGCCAACG...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLDVERE*RVDCAL
Trigger: AAGTGCACAGTCGACCCTTCACTCTCTCTCCACATC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFMPRAR*LMTKMW
Trigger: CCACATCTTCGTCATCAGTCACCTTGCTCTTGGCAT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACGCATCTTCATGGGTATaGTGCCAACTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHASSWV*CQLWHI
Trigger: AATGTGCCAGAGTTGGCATCATACCCATGAAGATGC...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCACAGAACTATTATTTaGCTGTGCCTTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTHRTII*LCLPHG
Trigger: ACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTG...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLLCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTLCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCATATCTCCCAGCATaGATCAGAAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHPYLPA*IRRMFL
Trigger: CAGGAACATCCTTCTGATGCATGCTGGGAGATATGG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSSFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGCTTACATTGGTGGGTaGTGTCTTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFAYIGG*CLRNCF
Trigger: GAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGCTTACATTGGTGGGTaGTGTCTTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIAYIGG*CLRNCF
Trigger: GAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLGFLGG*THFTAR
Trigger: CCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLGFLGG*THFTAR
Trigger: CCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCCCTACCCTAATGACTTaGTCTAGGGGTGCATATAGA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSPTLMT*SRGAYR
Trigger: TCTATATGCACCCCTAGAGCAAGTCATTAGGGTAGG...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAGGGCTGCTGTATCGTaGTCTGGTTTTGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLRAAVS*SGFGTK
Trigger: TTTGGTTCCAAAACCAGACCACGATACAGCAGCCCT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGAAGCCATCTGTAACTaGGAACTGGATTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAEAICN*ELDCHE
Trigger: TTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAGGTTGCCTGTCTCCTaGGAGATGAACCGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETRLPVS*EMNRRL
Trigger: CAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCATCCATGTGATTGTTaGAACGGGGTTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIHPCDC*NGVAKC
Trigger: GCACTTGGCAACCCCGTTCCAACAATCACATGGATG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLRDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKARDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILPRDG*FWRALG
Trigger: CCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHSAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLTHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDNYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFNYYPR*AWGSPN
Trigger: GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATT...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDLGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLSRWGA*ISCPNR
Trigger: CCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTCTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFLWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTGATGACGAAGATGTaGAGAGAGAGTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSLMTKM*RESEGS
Trigger: CGACCCTTCACTCTCTCTCCACATCTTCGTCATCAG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCCTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAACCCTACTCTGAGGTaGGAGGGGTACTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLNPTLR*EGYSIL
Trigger: AAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGGGTTTGCACTCTATaGCAACTTCTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGVCTL*QLLGLW
Trigger: CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLRMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTCAGAAGGATGTTCCTaGTCATTAAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSSEGCS*SLNLQR
Trigger: CCTCTGCAGATTTAATGATCAGGAACATCCTTCTGA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLKFCLI*HTVCCG
Trigger: ACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTGTTCCATTGGGTCTaGAAGCCACAATATAGCCGA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVFHWV*KPQYSR
Trigger: TCGGCTATATTGTGGCTTTCAGACCCAATGGAACAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATACACACTTGTCGCCTTaGCATCTGTGGGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYTHLSP*HLWEQH
Trigger: GTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATGCTGAATCCCTGTACTaGTGCCATGTTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYAESLY*CHVSTA
Trigger: AGCTGTGGAAACATGGCATCAGTACAGGGATTCAGC...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGAGTGCCCTGCTTTCTaGAAACAGGGTCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIECPAF*KQGPKY
Trigger: ATACTTTGGACCCTGTTTTCAGAAAGCAGGGCACTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLLCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCATATCTCCCAGCATaGATCAGAAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPYLPA*IRRMFL
Trigger: CAGGAACATCCTTCTGATGCATGCTGGGAGATATGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCTGTGGTCTGTACCCTaGAGCCATATCTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDLWSVP*SHISQH
Trigger: ATGCTGGGAGATATGGCTGCAGGGTACAGACCACAG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFTVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVITVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATGCTTACATTGGTGGGTaGTGTCTTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYAYIGG*CLRNCF
Trigger: GAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGC...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACCTGAGGTTGCTAGGTaGTTGACTAGGAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLPEVAR*LTRRGF
Trigger: AAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSWEWYY*LKFLCF
Trigger: GAAACACAGAAACTTCAAGCAGTAGTACCACTCCCA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGTGGCAGAGGCGAATTaGGGAGTTCTTAATCATTCA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLVAEAN*GVLNHS
Trigger: TGAATGATTAAGAACTCCGCAATTCGCCTCTGCCAC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR GCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATATATTGGGAAGTAGGTaGGGCGCCTCCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYILGSR*GASCGW
Trigger: CCAGCCGCAGGAGGCGCCGCACCTACTTCCCAATAT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCAAGCAGCATATGAAGTaGAGAGACCAGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTKQHMK*RDQEEI
Trigger: AATCTCTTCCTGGTCTCTCCACTTCATATGCTGCTT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCATCGTGGTCTGGTTTTaGAACCAAAGAGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSIVVWF*NQREMK
Trigger: CTTCATCTCTCTTTGGTTCCAAAACCAGACCACGAT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGGGCTGCTGTATCGTaGTCTGGTTTTGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRAAVS*SGFGTK
Trigger: TTTGGTTCCAAAACCAGACCACGATACAGCAGCCCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTCTTGCACAAAAACTaGCCCATAGTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTFLHKN*PIVHTF
Trigger: GAAAGTGTGGACTATGGGCCAGTTTTTGTGCAAGAA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGAAGCCATCTGTAACTaGGAACTGGATTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIEAICN*ELDCHE
Trigger: TTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATCTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYLPRDG*FWRALG
Trigger: CCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAG...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDTHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYLGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATCTGATGACGAAGATGTaGAGAGAGAGTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYLMTKM*RESEGS
Trigger: CGACCCTTCACTCTCTCTCCACATCTTCGTCATCAG...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTCCTCTCCATGACTaGCCAAGCAAGGCAAGAACA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIPLHD*PSKART
Trigger: TGTTCTTGCCTTGCTTGGCCAGTCATGGAGAGGAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
3UTR CAA 72 bp CATGTTTTGCCAGCTAAACAATTAGCATCCCTGTTTTaGCAAAGTCCAGCCTCTCCCACTTTAAAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HVLPAKQLASLF*QSPASPTLKEA
Trigger: CGCCTCCTTTAAAGTGGGAGAGGCTGGACTTTGCAAAAACAGGGATGCTAATTGTTTAGCTGGCAAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATAGATGATCTCTGGTaGATGTGGCGGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDIDDLW*MWRRRA
Trigger: TGCTCTCCTCCGCCACATTCACCAGAGATCATCTAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATAACCCTACTCTGAGGTaGGAGGGGTACTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDNPTLR*EGYSIL
Trigger: AAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCATTCCAGCATCTGATTaGTTCACATTGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTIPASD*FTLWII
Trigger: GATGATCCACAATGTGAATCAATCAGATGCTGGAAT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKRMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKKFCLI*HTVCCG
Trigger: ACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTT...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKKFCLI*HTVCCG
Trigger: ACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGCCCTCACTGTGAAGTaGTATAACGTATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAALTVK*YNVFPS
Trigger: AGAAGGAAATACGTTATATCACTTCACAGTGAGGGC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTGTAAGCCCTCACTGTaGAGTGATATAACGTATTTC +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLCKPSL*SDITYF
Trigger: GAAATACGTTATATCACTTCACAGTGAGGGCTTACA...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTGTAAGCCCTCACTGTaGAGTGATATAACGTATTTC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTCKPSL*SDITYF
Trigger: GAAATACGTTATATCACTTCACAGTGAGGGCTTACA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGGTTGCTAGGTGCTTaGCTAGGAGGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKRLLGA*LGGDFL
Trigger: CAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTCGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPARWLMV*RVPSPE
Trigger: CTCTGGGCTGGGAACCCGTCATACCATTAGCCAACG...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEDVERE*RVDCAL
Trigger: AAGTGCACAGTCGACCCTTCACTCTCTCTCCACATC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTTTCACCAGGAAGTTaGAGGAATCATCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTFSPGS*RNHQCQ
Trigger: TTGGCATTGATGATTCCTTCAACTTCCTGGTGAAAA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTTTTCACCAGGAAGTTaGAGGAATCATCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSFSPGS*RNHQCQ
Trigger: TTGGCATTGATGATTCCTTCAACTTCCTGGTGAAAA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCATATATTTAACAGTTTaGCATGGGGTCCACAGTACC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTIYLTV*HGVHST
Trigger: GGTACTGTGGACCCCATGTCAAACTGTTAAATATAT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTGAAAGACACATGGTaGCTGACAGAAACAGCATTA +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHLKDTW*LTETAL
Trigger: TAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAG...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACTGAAAGACACATGGTaGCTGACAGAAACAGCATTA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKALKDTW*LTETAL
Trigger: TAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAACAAACATGGTCCCTaGAGCATGGATTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVINKHGP*SMDWEK
Trigger: TTTCTCCCAATCCATGCTTCAGGGACCATGTTTGTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFLMKG*CIVVWF
Trigger: AAACCAGACCACGATACAGCAGCCCTTCATTAGGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFFLMKG*CIVVWF
Trigger: AAACCAGACCACGATACAGCAGCCCTTCATTAGGAA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCCCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACCATATCTCCCAGCATaGATCAGAAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLPYLPA*IRRMFL
Trigger: CAGGAACATCCTTCTGATGCATGCTGGGAGATATGG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAAVVVS*WAPGQC
Trigger: ACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYTVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACATCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTSFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGCTTACATTGGTGGGTaGTGTCTTCGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKAYIGG*CLRNCF
Trigger: GAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACCTGAGGTTGCTAGGTaGTTGACTAGGAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKPEVAR*LTRRGF
Trigger: AAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAGACACCAATAAGATaGCAGACTCCACTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKTPIR*QTPLSF
Trigger: GAAGGACAGTGGAGTCTGGCATCTTATTGGTGTCTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTGCTGTATCGTGGTCTaGTTTTGGAACCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVICCIVV*FWNQRE
Trigger: CTCTCTTTGGTTCCAAAACCAGACCACGATACAGCA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAGGGCTGCTGTATCGTaGTCTGGTTTTGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLRAAVS*SGFGTK
Trigger: TTTGGTTCCAAAACCAGACCACGATACAGCAGCCCT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCTGTAACTGGGAACTaGATTGCCACGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISVTGN*IATNFT
Trigger: TGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTCTGTAACTGGGAACTaGATTGCCACGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFSVTGN*IATNFT
Trigger: TGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCATCCATGTGATTGTTaGAACGGGGTTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDHPCDC*NGVAKC
Trigger: GCACTTGGCAACCCCGTTCCAACAATCACATGGATG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACATCCATGTGATTGTTaGAACGGGGTTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKHPCDC*NGVAKC
Trigger: GCACTTGGCAACCCCGTTCCAACAATCACATGGATG...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYRDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLPRDG*FWRALG
Trigger: CCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTATTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYSAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATTATCCCAGGTGGGCCTaGGGGTCCCCTAACAAGAAG +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYYPRWA*GSPNKK
Trigger: CTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATA...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATGAGGAGATTGGGCTGTaGTTGTCAGCTGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYEEIGL*LSAAGL
Trigger: GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTC...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCCAGCCCAGGGAAAATaGGCTGCGAGCTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHPAQGK*AASLKV
Trigger: AACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCTGG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTTAGGTCCACAGCCATaGCTGACTCCATGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETLGPQP*LTPCPL
Trigger: CAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKADHSR*GAWISC
Trigger: ACAGGAGATCCAAGCACCCCATCTCGAATGATCCGC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEADHSR*GAWISC
Trigger: ACAGGAGATCCAAGCACCCCATCTCGAATGATCCGC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAATTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETLWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTCACTTCACTGCTAGGTaGCCCATATCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFHFTAR*PISSSI
Trigger: AATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTG...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTGAGGGGATTTCTTGGTaGTTGCACTCACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFEGISW*LHSLHC
Trigger: GCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTC...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGAGGGGATTTCTTGGTaGTTGCACTCACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDEGISW*LHSLHC
Trigger: GCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFSSIWE*YYCLKF
Trigger: AAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLIDSSI*EWYYCL
Trigger: CAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTAT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTGATGACGAAGATGTaGAGAGAGAGTGAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLMTKM*RESEGS
Trigger: CGACCCTTCACTCTCTCTCCACATCTTCGTCATCAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCAAGGTAAACTATACTTaGGAGAGCTCATGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTKVNYT*ESSCFA
Trigger: GGCAAAACATGAGCTCTCCCAAGTATAGTTTACCTT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKALPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLLPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAATTCCAGCATCTGATTaGTTCACATTGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLIPASD*FTLWII
Trigger: GATGATCCACAATGTGAATCAATCAGATGCTGGAAT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLIVFFS*FSAKVG
Trigger: TCCCACTTTTGCACTGAATCAACTGAAGAAAACAAT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGGGGTTTGCACTCTATaGCAACTTCTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKGVCTL*QLLGLW
Trigger: CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIERMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAAGGATGCTTGGGCCCTaGTGCTTTCAAAATGTCCAC +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKRMLGP*CFQNVH
Trigger: GTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCT...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCAGAAGGATGTTCCTaGTCATTAAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISEGCS*SLNLQR
Trigger: CCTCTGCAGATTTAATGATCAGGAACATCCTTCTGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTCAGAAGGATGTTCCTaGTCATTAAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFSEGCS*SLNLQR
Trigger: CCTCTGCAGATTTAATGATCAGGAACATCCTTCTGA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATCCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGTGTTCCATTGGGTCTaGAAGCCACAATATAGCCGA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDVFHWV*KPQYSR
Trigger: TCGGCTATATTGTGGCTTTCAGACCCAATGGAACAC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATCTAATCCTGTTAGGATaGCGAAAGACTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYLILLG*RKTHSL
Trigger: GAGGGAATGAGTCTTTCGTCATCCTAACAGGATTAG...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGCCCTCACTGTGAAGTaGTATAACGTATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFALTVK*YNVFPS
Trigger: AGAAGGAAATACGTTATATCACTTCACAGTGAGGGC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANDVERE*RVDCAL
Trigger: AAGTGCACAGTCGACCCTTCACTCTCTCTCCACATC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTTTTCACCAGGAAGTTaGAGGAATCATCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHFSPGS*RNHQCQ
Trigger: TTGGCATTGATGATTCCTTCAACTTCCTGGTGAAAA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCATTTTCACCAGGAAGTTaGAGGAATCATCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAFSPGS*RNHQCQ
Trigger: TTGGCATTGATGATTCCTTCAACTTCCTGGTGAAAA...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAATGGACCACATCACTaGAGCATTTTTCATATGTCC +
Preference number: 4 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHNGPHH*SIFHMS
Trigger: GGACATATGAAAAATGCTTCAGTGATGTGGTCCATT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCACTCTCAGGCTCAAGATaGCTCTTTGAAATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKALSGSR*LFEIAN
Trigger: ATTTGCTATTTCAAAGAGTCATCTTGAGCCTGAGAG...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCATCTTCATGGGTATaGTGCCAACTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKASSWV*CQLWHI
Trigger: AATGTGCCAGAGTTGGCATCATACCCATGAAGATGC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTGAAAGACACATGGTaGCTGACAGAAACAGCATTA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILKDTW*LTETAL
Trigger: TAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCCAAAGTATGCTCTTaGCAAAGGAACTGGTATCTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISKVCS*QRNWYL
Trigger: CAGATACCAGTTCCTTTGTCAAGAGCATACTTTGGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTGAGTGCCCTGCTTTCTaGAAACAGGGTCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFECPAF*KQGPKY
Trigger: ATACTTTGGACCCTGTTTTCAGAAAGCAGGGCACTC...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGAACAAGAGCTGTGTaGGAAGCCAAACCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRTRAV*EAKPCY
Trigger: ATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETFPHRD*TSCPAT
Trigger: AGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIRFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATCTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYLCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCCAGGGAAAATGGGCTaGGAGCTTGAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANPGKMG*ELEGCR
Trigger: CCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACCTGAGGTTGCTAGGTaGTTGACTAGGAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKPEVAR*LTRRGF
Trigger: AAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGG...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFWEWYY*LKFLCF
Trigger: GAAACACAGAAACTTCAAGCAGTAGTACCACTCCCA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGTGAAGGGTCGACTGTaGACTTGTGATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKVKGRL*TCDFST
Trigger: GGTGGAAAAATCACAAGTGCACAGTCGACCCTTCAC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTTCTTCATTAAAGAGTaGCCAATAAGATGCCAGACT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSFFIKE*PIRCQT
Trigger: AGTCTGGCATCTTATTGGGCACTCTTTAATGAAGAA...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528682.5
CDS-3UTR GCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAAGACACCAATAAGATaGCAGACTCCACTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYKTPIR*QTPLSF
Trigger: GAAGGACAGTGGAGTCTGGCATCTTATTGGTGTCTT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAGCAGCATATGAAGTaGAGAGACCAGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKQHMK*RDQEEI
Trigger: AATCTCTTCCTGGTCTCTCCACTTCATATGCTGCTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGCTGTATCGTGGTCTaGTTTTGGAACCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLCCIVV*FWNQRE
Trigger: CTCTCTTTGGTTCCAAAACCAGACCACGATACAGCA...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCTTGCACAAAAACTaGCCCATAGTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFLHKN*PIVHTF
Trigger: GAAAGTGTGGACTATGGGCCAGTTTTTGTGCAAGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTGTAACTGGGAACTaGATTGCCACGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYSVTGN*IATNFT
Trigger: TGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGA...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTCTGTAACTGGGAACTaGATTGCCACGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYSVTGN*IATNFT
Trigger: TGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGAAGCCATCTGTAACTaGGAACTGGATTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDEAICN*ELDCHE
Trigger: TTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATCAGAACGACACCCTaGCCTTCCCTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHIRTTP*PSLTET
Trigger: AGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANQSEWR*RTKDSS
Trigger: GCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAAGAGATGGTTGGTTTTaGAGAGCCTTGGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTRDGWF*RALGFA
Trigger: TGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKSAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATACACACTGTCTGCTGTaGTCTGTACCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANTHCLL*SVPCSH
Trigger: ATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGGCTCCAGGACAGTGTaGCCGTACTTTCGGTTATTT +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKGSRTV*PYFRLF
Trigger: AAATAACCGAAAGTACGGCCACACTGTCCTGGAGCC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATTTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYFRLHW*VLSSEL
Trigger: CAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAA...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAATTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTCTGTGGGAGCAGCACTaGGTTCTCCTTCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPALWEQH*VLLQLN
Trigger: GTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAG...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACACTTCACTGCTAGGTaGCCCATATCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKHFTAR*PISSSI
Trigger: AATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTG...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGAGGGGATTTCTTGGTaGTTGCACTCACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEEGISW*LHSLHC
Trigger: GCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTIDSSI*EWYYCL
Trigger: CAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTAT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATCTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTATTTAACAGTTTGACATaGGGTCCACAGTACCTTCAT +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLFNSLT*GPQYLH
Trigger: ATGAAGGTACTGTGGACCCCATGTCAAACTGTTAAA...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCGTAGTTGGTTATATTaGGAAGTAGGTGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYRSWLY*EVGAAP
Trigger: AGGCGCCGCACCTACTTCCCAATATAACCAACTACG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAACCCCCACGCCGTAGTTaGTTATATTGGGAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEPPRRS*LYWEVG
Trigger: ACCTACTTCCCAATATAACCAACTACGGCGTGGGGG...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATATAGATGATCTCTGGTaGATGTGGCGGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANIDDLW*MWRRRA
Trigger: TGCTCTCCTCCGCCACATTCACCAGAGATCATCTAT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVILPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTCCAGCATCTGATTaGTTCACATTGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIPASD*FTLWII
Trigger: GATGATCCACAATGTGAATCAATCAGATGCTGGAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACCATGTCCCCTGTTATaGTTTCTGGGACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTPCPLL*FLGLSL
Trigger: TAAAGACAGTCCCAGAAATCATAACAGGGGACATGG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTATTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACTAATCCTGTTAGGATaGCGAAAGACTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKLILLG*RKTHSL
Trigger: GAGGGAATGAGTCTTTCGTCATCCTAACAGGATTAG...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTAATCCTGTTAGGATaGCGAAAGACTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLILLG*RKTHSL
Trigger: GAGGGAATGAGTCTTTCGTCATCCTAACAGGATTAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGCCCTCACTGTGAAGTaGTATAACGTATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYALTVK*YNVFPS
Trigger: AGAAGGAAATACGTTATATCACTTCACAGTGAGGGC...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAGGTTGCTAGGTGCTTaGCTAGGAGGGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETRLLGA*LGGDFL
Trigger: CAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGATGGTACCCTAATTTaGGAACTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLDGTLI*ELAVPS
Trigger: AGATGGAACAGCTAGTTCTCAAATTAGGGTACCATC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHMPRAR*LMTKMW
Trigger: CCACATCTTCGTCATCAGTCACCTTGCTCTTGGCAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGCTGAATCCCTGTACTaGTGCCATGTTTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANAESLY*CHVSTA
Trigger: AGCTGTGGAAACATGGCATCAGTACAGGGATTCAGC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTCTCAGGCTCAAGATaGCTCTTTGAAATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSLSGSR*LFEIAN
Trigger: ATTTGCTATTTCAAAGAGTCATCTTGAGCCTGAGAG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATGCATCTTCATGGGTATaGTGCCAACTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYASSWV*CQLWHI
Trigger: AATGTGCCAGAGTTGGCATCATACCCATGAAGATGC...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTCACAGAACTATTATTTaGCTGTGCCTTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFHRTII*LCLPHG
Trigger: ACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTG...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCCAAAGTATGCTCTTaGCAAAGGAACTGGTATCTG +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYSKVCS*QRNWYL
Trigger: CAGATACCAGTTCCTTTGTCAAGAGCATACTTTGGA...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCTCTTAATGGGAACTaGAGCAGAGGAAAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVISLNGN*SRGKVR
Trigger: TCTTACTTTTCCTCTGCTTCAGTTCCCATTAAGAGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLRFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTGCACTCATAAATaGCTGCATCATCCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLCTHK*LHHPAV
Trigger: TACAGCTGGATGATGCAGGCATTTATGAGTGCAGAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGACTAGCATCGTGAATTaGTTTGCAATTAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLTSIVN*FAIKDN
Trigger: ATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIETVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATTCATTCGAGATGGGGTaGTTGGATCTCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHSFEMG*LDLLSQ
Trigger: TTGGGACAGGAGATCCAAGCACCCCATCTCGAATGA...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGAACTGCTTCATTTGTaGGGATCATTCGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEELLHL*GSFEMG
Trigger: CCCCATCTCGAATGATCCGCACAAATGAAGCAGTTC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAGTTTTGACTGTTTCTaGTGTATCTTCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLSFDCF*CIFLFH
Trigger: ATGGAACAGGAAGATACAGCAGAAACAGTCAAAACT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYWEWYY*LKFLCF
Trigger: GAAACACAGAAACTTCAAGCAGTAGTACCACTCCCA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGTGAAGGGTCGACTGTaGACTTGTGATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKVKGRL*TCDFST
Trigger: GGTGGAAAAATCACAAGTGCACAGTCGACCCTTCAC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGTGAAGGGTCGACTGTaGACTTGTGATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEVKGRL*TCDFST
Trigger: GGTGGAAAAATCACAAGTGCACAGTCGACCCTTCAC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCCTACCCTAATGACTTaGTCTAGGGGTGCATATAGA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDPTLMT*SRGAYR
Trigger: TCTATATGCACCCCTAGAGCAAGTCATTAGGGTAGG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAAGCAGCATATGAAGTaGAGAGACCAGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYKQHMK*RDQEEI
Trigger: AATCTCTTCCTGGTCTCTCCACTTCATATGCTGCTT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTGCTGTATCGTGGTCTaGTTTTGGAACCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDCCIVV*FWNQRE
Trigger: CTCTCTTTGGTTCCAAAACCAGACCACGATACAGCA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTTCTTGCACAAAAACTaGCCCATAGTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYFLHKN*PIVHTF
Trigger: GAAAGTGTGGACTATGGGCCAGTTTTTGTGCAAGAA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTACTCCCCACAGTGTTaGTTGCTAAACACTGATAAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIYSPQC*LLNTDN
Trigger: ATTATCAGTGTTTAGCAACCAACACTGTGGGGAGTA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTACTCCCCACAGTGTTaGTTGCTAAACACTGATAAT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFYSPQC*LLNTDN
Trigger: ATTATCAGTGTTTAGCAACCAACACTGTGGGGAGTA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGAC +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETITQSE*RWRTKD
Trigger: GTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAAT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCATCCATGTGATTGTTaGAACGGGGTTGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHHPCDC*NGVAKC
Trigger: GCACTTGGCAACCCCGTTCCAACAATCACATGGATG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAATCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIESAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATGTTGTAGGAGGAGATTaGGCTGTGGTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYVVGGD*AVVVSC
Trigger: GCAGCTGACAACCACAGCCCAATCTCCTCCTACAAC...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATTCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGG +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYSRWGA*ISCPNR
Trigger: CCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGAGGGGATTTCTTGGTaGTTGCACTCACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANEGISW*LHSLHC
Trigger: GCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKSSIWE*YYCLKF
Trigger: AAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCATCTCAGGATCCTaGTTCTCCACTTACACTACA +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLISGS*FSTYTT
Trigger: TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAGGTAAACTATACTTaGGAGAGCTCATGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFKVNYT*ESSCFA
Trigger: GGCAAAACATGAGCTCTCCCAAGTATAGTTTACCTT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCATACCCAGCTATAGATaGTCTCTGGTGAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETIPSYR*SLVNVA
Trigger: CGCCACATTCACCAGAGATCATCTATAGCTGGGTAT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATAACCCTACTCTGAGGTaGGAGGGGTACTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYNPTLR*EGYSIL
Trigger: AAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATACATTCCAGCATCTaGTTGATTCACATTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIHSSI*LIHIVD
Trigger: ATCCACAATGTGAATCAATCAGATGCTGGAATGTAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIVFFS*FSAKVG
Trigger: TCCCACTTTTGCACTGAATCAACTGAAGAAAACAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCGGGGTTTGCACTCTATaGCAACTTCTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETGVCTL*QLLGLW
Trigger: CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCC...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACATCAGAAGGATGTTCCTaGTCATTAAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTSEGCS*SLNLQR
Trigger: CCTCTGCAGATTTAATGATCAGGAACATCCTTCTGA...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTTCAGAAGGATGTTCCTaGTCATTAAATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFSEGCS*SLNLQR
Trigger: CCTCTGCAGATTTAATGATCAGGAACATCCTTCTGA...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR TCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTGCCCTCACTGTGAAGTaGTATAACGTATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFALTVK*YNVFPS
Trigger: AGAAGGAAATACGTTATATCACTTCACAGTGAGGGC...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGCCCTCACTGTGAAGTaGTATAACGTATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDALTVK*YNVFPS
Trigger: AGAAGGAAATACGTTATATCACTTCACAGTGAGGGC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGATGGTACCCTAATTTaGGAACTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKDGTLI*ELAVPS
Trigger: AGATGGAACAGCTAGTTCTCAAATTAGGGTACCATC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAGATGGTACCCTAATTTaGGAACTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTDGTLI*ELAVPS
Trigger: AGATGGAACAGCTAGTTCTCAAATTAGGGTACCATC...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAMPRAR*LMTKMW
Trigger: CCACATCTTCGTCATCAGTCACCTTGCTCTTGGCAT...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATAATGGACCACATCACTaGAGCATTTTTCATATGTCC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYNGPHH*SIFHMS
Trigger: GGACATATGAAAAATGCTTCAGTGATGTGGTCCATT...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAATGGACCACATCACTaGAGCATTTTTCATATGTCC +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLNGPHH*SIFHMS
Trigger: GGACATATGAAAAATGCTTCAGTGATGTGGTCCATT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACTCTTCTCTGGCATATaGCTTTGCAATAACTATCCT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLLFSGI*LCNNYP
Trigger: AGGATAGTTATTGCAAAGTCATATGCCAGAGAAGAG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATATATATTTAACAGTTTaGCATGGGGTCCACAGTACC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYIYLTV*HGVHST
Trigger: GGTACTGTGGACCCCATGTCAAACTGTTAAATATAT...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTTCAAGACACAAGATaGTTTTCTCTTAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVQDTR*FSLNGN
Trigger: GTTCCCATTAAGAGAAAATCATCTTGTGTCTTGAAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKRFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATACTGTCTTTACTGTTTaGCAGCCCAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHTVFTV*QPRENG
Trigger: CCCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAGTTTTGACTGTTTCTaGTGTATCTTCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFSFDCF*CIFLFH
Trigger: ATGGAACAGGAAGATACAGCAGAAACAGTCAAAACT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETGFLGG*THFTAR
Trigger: CCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKWEWYY*LKFLCF
Trigger: GAAACACAGAAACTTCAAGCAGTAGTACCACTCCCA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATGTGAAGGGTCGACTGTaGACTTGTGATTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHVKGRL*TCDFST
Trigger: GGTGGAAAAATCACAAGTGCACAGTCGACCCTTCAC...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAGCAGCATATGAAGTaGAGAGACCAGGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKKQHMK*RDQEEI
Trigger: AATCTCTTCCTGGTCTCTCCACTTCATATGCTGCTT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATAGGGCTGCTGTATCGTaGTCTGGTTTTGGAACCAAA +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANRAAVS*SGFGTK
Trigger: TTTGGTTCCAAAACCAGACCACGATACAGCAGCCCT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAATTCTTGCACAAAAACTaGCCCATAGTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKFLHKN*PIVHTF
Trigger: GAAAGTGTGGACTATGGGCCAGTTTTTGTGCAAGAA...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATTCTGTAACTGGGAACTaGATTGCCACGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYSVTGN*IATNFT
Trigger: TGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGA...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCGAAGCCATCTGTAACTaGGAACTGGATTGCCACGAA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETEAICN*ELDCHE
Trigger: TTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTC...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTACTCCCCACAGTGTTaGTTGCTAAACACTGATAAT +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYYSPQC*LLNTDN
Trigger: ATTATCAGTGTTTAGCAACCAACACTGTGGGGAGTA...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGATTCAGTGCAAAAGTaGGAGCTGAAGCTAGAATCT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKDSVQK*ELKLES
Trigger: AGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCGGTTTTGGAGAGCCTTaGGGTTTGCACTCTATGACA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETGFGEP*GLHSMT
Trigger: TGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACC...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTCTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPALPRDG*FWRALG
Trigger: CCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAG...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATTTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHFFRLH*WVLSSE
Trigger: TTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAA...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATCACTTCACTGCTAGGTaGCCCATATCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYHFTAR*PISSSI
Trigger: AATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTG...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGAGGGGATTTCTTGGTaGTTGCACTCACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAEGISW*LHSLHC
Trigger: GCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAATCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIESSIWE*YYCLKF
Trigger: AAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGA...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHIDSSI*EWYYCL
Trigger: CAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTCTGCATATTTTTACTaGACTAAGAACTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFSAYFY*TKNCPL
Trigger: GAGAGGACAGTTCTTAGTCCAGTAAAAATATGCAGA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTCAGTTACTTAACAAATaGATGGCACACACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFQLLNK*MAHTRS
Trigger: ACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTG...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACAGTTACTTAACAAATaGATGGCACACACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKQLLNK*MAHTRS
Trigger: ACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAAGGTAAACTATACTTaGGAGAGCTCATGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYKVNYT*ESSCFA
Trigger: GGCAAAACATGAGCTCTCCCAAGTATAGTTTACCTT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKLPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACTCCCACTGTCTAACTaGGTATCATTCAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKLPLSN*VSFSFS
Trigger: AGAAAAACTGAATGATACTCAGTTAGACAGTGGGAG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAATTCCAGCATCTGATTaGTTCACATTGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTIPASD*FTLWII
Trigger: GATGATCCACAATGTGAATCAATCAGATGCTGGAAT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTCCAGCATCTGATTaGTTCACATTGTGGATCATC +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKIPASD*FTLWII
Trigger: GATGATCCACAATGTGAATCAATCAGATGCTGGAAT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGGGTTTGCACTCTATaGCAACTTCTTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAGVCTL*QLLGLW
Trigger: CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTAAGCCTTCCCCATTCTaGAACTCTTCAGATACTGGC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAKPSPF*NSSDTG
Trigger: GCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTT...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGTGTTCCATTGGGTCTaGAAGCCACAATATAGCCGA +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAVFHWV*KPQYSR
Trigger: TCGGCTATATTGTGGCTTTCAGACCCAATGGAACAC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATGTGTTCCATTGGGTCTaGAAGCCACAATATAGCCGA +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYVFHWV*KPQYSR
Trigger: TCGGCTATATTGTGGCTTTCAGACCCAATGGAACAC...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGGTTCTCCTTCAGCTaGACAGATGACCACAATTTG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAGFSFS*TDDHNL
Trigger: CAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTGTAAGCCCTCACTGTaGAGTGATATAACGTATTTC +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDCKPSL*SDITYF
Trigger: GAAATACGTTATATCACTTCACAGTGAGGGCTTACA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGATGGTACCCTAATTTaGGAACTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKDGTLI*ELAVPS
Trigger: AGATGGAACAGCTAGTTCTCAAATTAGGGTACCATC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTTTCACCAGGAAGTTaGAGGAATCATCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKFSPGS*RNHQCQ
Trigger: TTGGCATTGATGATTCCTTCAACTTCCTGGTGAAAA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAAATGGACCACATCACTaGAGCATTTTTCATATGTCC +
Preference number: 4 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKNGPHH*SIFHMS
Trigger: GGACATATGAAAAATGCTTCAGTGATGTGGTCCATT...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCACAGAACTATTATTTaGCTGTGCCTTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETHRTII*LCLPHG
Trigger: ACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETFLMKG*CIVVWF
Trigger: AAACCAGACCACGATACAGCAGCCCTTCATTAGGAA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIERFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYRFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATGCACTCATAAATGCCTaGATCATCCAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYALINA*IIQLYI
Trigger: AATGTACAGCTGGATGATGCAGGCATTTATGAGTGC...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTAGCATCGTGAATTaGTTTGCAATTAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFTSIVN*FAIKDN
Trigger: ATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGT...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCACTAGCATCGTGAATTaGTTTGCAATTAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVITSIVN*FAIKDN
Trigger: ATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR GCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATCCATATCTCCCAGCATaGATCAGAAGGATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYPYLPA*IRRMFL
Trigger: CAGGAACATCCTTCTGATGCATGCTGGGAGATATGG...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAGFLGG*THFTAR
Trigger: CCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: QARQEQEQELCEKPNLVIILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAATACTCCCCACAGTGTTaGTTGCTAAACACTGATAAT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKYSPQC*LLNTDN
Trigger: ATTATCAGTGTTTAGCAACCAACACTGTGGGGAGTA...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTTCTGCAGAGGATGCTTaGGCCCTGATGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPASAEDA*ALMLSK
Trigger: TTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGA...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANSSIWE*YYCLKF
Trigger: AAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYIDSSI*EWYYCL
Trigger: CAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTAT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATTCTGCATATTTTTACTaGACTAAGAACTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYSAYFY*TKNCPL
Trigger: GAGAGGACAGTTCTTAGTCCAGTAAAAATATGCAGA...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAATACTTAACAAATGGATaGCACACACTCGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEYLTNG*HTLGVI
Trigger: GATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTA...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAACAGTTACTTAACAAATaGATGGCACACACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEQLLNK*MAHTRS
Trigger: ACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTG...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGCACTGAAATTCATCTaGACTCGCTTTCTATCTTGC +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEALKFI*TRFLSC
Trigger: GCAAGATAGAAAGCGAGTCCAGATGAATTTCAGTGC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAGCACTGAAATTCATCTaGACTCGCTTTCTATCTTGC +
Preference number: 4 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKALKFI*TRFLSC
Trigger: GCAAGATAGAAAGCGAGTCCAGATGAATTTCAGTGC...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTTTTAACAGTTTGACATaGGGTCCACAGTACCTTCAT +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFFNSLT*GPQYLH
Trigger: ATGAAGGTACTGTGGACCCCATGTCAAACTGTTAAA...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
3UTR CAA 72 bp TTAGAAGAAAACCTTGGACCTAATTCAACATCTGTTTaGGCAGTAGGTAAAGAAATGGAAACGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LEENLGPNSTSV*AVGKEMETLCP
Trigger: GGGACAGAGCGTTTCCATTTCTTTACCTACTGCCAAAACAGATGTTGAATTAGGTCCAAGGTTTTCTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATACATTCCAGCATCTaGTTGATTCACATTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKIHSSI*LIHIVD
Trigger: ATCCACAATGTGAATCAATCAGATGCTGGAATGTAT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGATGGTACCCTAATTTaGGAACTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANDGTLI*ELAVPS
Trigger: AGATGGAACAGCTAGTTCTCAAATTAGGGTACCATC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCTCTCAGGCTCAAGATaGCTCTTTGAAATAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYLSGSR*LFEIAN
Trigger: ATTTGCTATTTCAAAGAGTCATCTTGAGCCTGAGAG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCTCTTCTCTGGCATATaGCTTTGCAATAACTATCCT +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYLFSGI*LCNNYP
Trigger: AGGATAGTTATTGCAAAGTCATATGCCAGAGAAGAG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYFLMKG*CIVVWF
Trigger: AAACCAGACCACGATACAGCAGCCCTTCATTAGGAA...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279463.7
ENST00000524871.6
CDS-3UTR GCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATGACCAGAATCCTTTaGTTCACTTGGATTGCTTAT +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDMTRIL*FTWIAY
Trigger: ATAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAACCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAGATTTCCGCAGACGTaGCTTACTAGGAATATAACC +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETRFPQT*LTRNIT
Trigger: GGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAATTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAACTAGCATCGTGAATTaGTTTGCAATTAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLTSIVN*FAIKDN
Trigger: ATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAAGTTTTGACTGTTTCTaGTGTATCTTCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTSFDCF*CIFLFH
Trigger: ATGGAACAGGAAGATACAGCAGAAACAGTCAAAACT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTCCTACCCTAATGACTTaGTCTAGGGGTGCATATAGA +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAPTLMT*SRGAYR
Trigger: TCTATATGCACCCCTAGAGCAAGTCATTAGGGTAGG...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATTTCTTGCACAAAAACTaGCCCATAGTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHFLHKN*PIVHTF
Trigger: GAAAGTGTGGACTATGGGCCAGTTTTTGTGCAAGAA...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETFPRLI*KHLGSV
Trigger: TACGGATCCTAAATGCTTCCAAATCAGACGAGGGAA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTTCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPASSIWE*YYCLKF
Trigger: AAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGA...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTTCTGCATATTTTTACTaGACTAAGAACTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFSAYFY*TKNCPL
Trigger: GAGAGGACAGTTCTTAGTCCAGTAAAAATATGCAGA...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTACTTAACAAATGGATaGCACACACTCGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETYLTNG*HTLGVI
Trigger: GATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCAGTTACTTAACAAATaGATGGCACACACTCGGAGT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHQLLNK*MAHTRS
Trigger: ACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATACATTCCAGCATCTaGTTGATTCACATTGTGGAT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEIHSSI*LIHIVD
Trigger: ATCCACAATGTGAATCAATCAGATGCTGGAATGTAT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QYTELLFDCAFHTVYALYIVFFS*FSAKVG
Trigger: TCCCACTTTTGCACTGAATCAACTGAAGAAAACAAT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAATTTCATCTCGATAAATaGATTTGGAAGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEFHLDK*IWKLQR
Trigger: CCTCTGAAGCTTCCAAATTCATTTATCGAGATGAAA...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCTCTTCTCTGGCATATaGCTTTGCAATAACTATCCT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANLFSGI*LCNNYP
Trigger: AGGATAGTTATTGCAAAGTCATATGCCAGAGAAGAG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCCAGACAAATATAGCTaGCAACATCTGATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANPDKYS*QHLMFG
Trigger: TCCAAACATCAGATGTTGGCAGCTATATTTGTCTGG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAACTAGCATCGTGAATTaGTTTGCAATTAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTTSIVN*FAIKDN
Trigger: ATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATTACTCCCCACAGTGTTaGTTGCTAAACACTGATAAT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHYSPQC*LLNTDN
Trigger: ATTATCAGTGTTTAGCAACCAACACTGTGGGGAGTA...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCCCTGTTATGATTTCTaGGACTGTCTTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANPCYDF*DCLYCL
Trigger: CAAACAGTAAAGACAGTCCCAGAAATCATAACAGGG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTTACTTAACAAATGGATaGCACACACTCGGAGTCATC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAYLTNG*HTLGVI
Trigger: GATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTA...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGCACTGAAATTCATCTaGACTCGCTTTCTATCTTGC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAALKFI*TRFLSC
Trigger: GCAAGATAGAAAGCGAGTCCAGATGAATTTCAGTGC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTTTAACAGTTTGACATaGGGTCCACAGTACCTTCAT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANFNSLT*GPQYLH
Trigger: ATGAAGGTACTGTGGACCCCATGTCAAACTGTTAAA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHIAANI*CLDFRN
Trigger: ATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATACATTCCAGCATCTaGTTGATTCACATTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHIHSSI*LIHIVD
Trigger: ATCCACAATGTGAATCAATCAGATGCTGGAATGTAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETIVFFS*FSAKVG
Trigger: TCCCACTTTTGCACTGAATCAACTGAAGAAAACAAT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANIVFFS*FSAKVG
Trigger: TCCCACTTTTGCACTGAATCAACTGAAGAAAACAAT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTTGTAAGCCCTCACTGTaGAGTGATATAACGTATTTC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPACKPSL*SDITYF
Trigger: GAAATACGTTATATCACTTCACAGTGAGGGCTTACA...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTATATATTTAACAGTTTaGCATGGGGTCCACAGTACC +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPAIYLTV*HGVHST
Trigger: GGTACTGTGGACCCCATGTCAAACTGTTAAATATAT...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTTTGTTTTCTCTAACTaGTCTGTCTCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETFVFSN*SVSFLP
Trigger: TGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR GCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAGTTTTGACTGTTTCTaGTGTATCTTCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETSFDCF*CIFLFH
Trigger: ATGGAACAGGAAGATACAGCAGAAACAGTCAAAACT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: MDHITEAFFICPAGLSIEILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAGTGATTTAAGACTGTaGTTACTATCCCATAGCAGA +
Preference number: 4 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETSDLRL*LLSHSR
Trigger: TCTGCTATGGGATAGTAACCACAGTCTTAAATCACT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR TCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATATACATTCCAGCATCTaGTTGATTCACATTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYIHSSI*LIHIVD
Trigger: ATCCACAATGTGAATCAATCAGATGCTGGAATGTAT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATATCCTTTGCTTCACTTaGATTGCTTATAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANILCFT*IAYNEG
Trigger: ACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGAT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CCA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTAGTGATTTAAGACTGTaGTTACTATCCCATAGCAGA +
Preference number: 4 (lower is better)
Translates to: CTYLIMDHITEAFFICPASDLRL*LLSHSR
Trigger: TCTGCTATGGGATAGTAACCACAGTCTTAAATCACT...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CCA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATAGTGATTTAAGACTGTaGTTACTATCCCATAGCAGA +
Preference number: 4 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYSDLRL*LLSHSR
Trigger: TCTGCTATGGGATAGTAACCACAGTCTTAAATCACT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS TCA 90 bp CCCAGGTGGGCCTGGGGGTCCCCTAACAAGAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGTCTGTACCCTGCAGCCATATCTCCC +
Preference number: 5 (lower is better)
Translates to: PRWAWGSPNKKFCLI*HTVCCGLYPAAISP
Trigger: GGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTTGTTAGGGGACCCCCAGGCCCACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS GCA 90 bp GAGAGCGGTTCCTCGGGTCCTTTGCAGCCTGTGGCAGAGGCGAATTaGGGAGTTCTTAATCATTCAGAGGGAATCCTCCAGCTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ESGSSGPLQPVAEAN*GVLNHSEGILQLAL
Trigger: CAGGGCAAGCTGGAGGATTCCCTCTGAATGATTAAGAACTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACCGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS-3UTR CAA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCAGGGAATCCTCCAGCTaGCCCTGCCTCTCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSRESSS*PCLSQQ
Trigger: CTGCTGCGAGAGGCAGGGCAAGCTGGAGGATTCCCT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGTTCCTCGGGTCCTTaGCAGCCTGTGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGSSGP*QPVAEA
Trigger: CGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS GCA 90 bp AGGAGAGCACATCAGAACGACACCCTGGCCTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACTAAAATTTCCCAGATAGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: RRAHQNDTLAFPHRD*TSCPATKISQIGKL
Trigger: CAGTTTGCCTATCTGGGAAATTTTAGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATGTGCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTDTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGAGAAACCTGAGAGCCTaGCTGCTCCCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLRNLRA*LLPPEV
Trigger: AACCTCAGGTGGGAGCAGCAAGGCTCTCAGGTTTCT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCAGAAACCTGAGAGCCTaGCTGCTCCCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSRNLRA*LLPPEV
Trigger: AACCTCAGGTGGGAGCAGCAAGGCTCTCAGGTTTCT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS TCA 90 bp TGCACTATTAGCATACTCACCCCTAACAAGAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGTCTGTACCCTGCAGCCATATCTCCC +
Preference number: 5 (lower is better)
Translates to: CTISILTPNKKFCLI*HTVCCGLYPAAISP
Trigger: GGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTTGTTAGGGGTGAGTATGCTAATAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528727.5
CDS-3UTR CAA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAGAAACCTGAGAGCCTaGCTGCTCCCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHRNLRA*LLPPEV
Trigger: AACCTCAGGTGGGAGCAGCAAGGCTCTCAGGTTTCT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAAGAAACCTGAGAGCCTaGCTGCTCCCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLRNLRA*LLPPEV
Trigger: AACCTCAGGTGGGAGCAGCAAGGCTCTCAGGTTTCT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 90 bp CTAGCCAGCTGGGTGAAGAAGCACTCAGTGTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTTTGGAACCAAAGAGAGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: LASWVKKHSVFLMKG*CIVVWFWNQREMKM
Trigger: CATCTTCATCTCTCTTTGGTTCCAAAACCAGACCACGATACAGCAGCCCTTCATTAGGAACACTGAGTGCTTCTTCACCCAGCTGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTGGTTTTGGAGAGCCTaGGGGTTTGCACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLWFWRA*GFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCA...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTACTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLLLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIDTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGCTAGGAGGGGATTTCTaGGTGGTTGCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLLGGDF*VVALTS
Trigger: TGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAG...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCCTAGGAGGGGATTTCTaGGTGGTTGCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTLGGDF*VVALTS
Trigger: TGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAG...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTTAGCATCCCTGTTTTaGCAAAGTCCAGCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTLASLF*QSPASP
Trigger: GGGAGAGGCTGGACTTTGCAAAAACAGGGATGCTAA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCGGTTCCTCGGGTCCTTaGCAGCCTGTGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETGSSGP*QPVAEA
Trigger: CGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACC...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTGGTTTTGGAGAGCCTaGGGGTTTGCACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHWFWRA*GFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCA...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAAGAGATGGTTGGTTTaGGAGAGCCTTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHKRWLV*ESLGVC
Trigger: GCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATCTTCCAAGAGATGGTaGGTTTTGGAGAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLSSKRW*VLESLG
Trigger: CCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKADCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTCGGAACTGCTTCATTaGTGCGGATCATTCGAGATG +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLSELLH*CGSFEM
Trigger: CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGA...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTCGGAACTGCTTCATTaGTGCGGATCATTCGAGATG +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTSELLH*CGSFEM
Trigger: CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSLLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCCTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFLLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVILLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLDTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACTAGGAGGGGATTTCTaGGTGGTTGCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLLGGDF*VVALTS
Trigger: TGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAG...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAGAGGTTGCTAGGTGCTaGACTAGGAGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLEVARC*TRRGFL
Trigger: AAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTC...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATGGTTTTGGAGAGCCTaGGGGTTTGCACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSWFWRA*GFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCA...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTGGTTTTGGAGAGCCTaGGGGTTTGCACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIWFWRA*GFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAGAGATGGTTGGTTTaGGAGAGCCTTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKRWLV*ESLGVC
Trigger: GCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCTTCCAAGAGATGGTaGGTTTTGGAGAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVISSKRW*VLESLG
Trigger: CCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGGTTGTAGGAGGAGATaGGGCTGTGGTTGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKGCRRR*GCGCQL
Trigger: CAGCTGACAACCACAGCCCAATCTCCTCCTACAACC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFDCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIDCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCATCGGAACTGCTTCATTaGTGCGGATCATTCGAGATG +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKASELLH*CGSFEM
Trigger: CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGA...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCCAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKDTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACTAGGAGGGGATTTCTaGGTGGTTGCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSLGGDF*VVALTS
Trigger: TGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAG...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATAGAAACCTGAGAGCCTaGCTGCTCCCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDRNLRA*LLPPEV
Trigger: AACCTCAGGTGGGAGCAGCAAGGCTCTCAGGTTTCT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGGGAGAGCTCATGTTTaGCCAGCTAAACAATTAGCA +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTGRAHV*PAKQLA
Trigger: TGCTAATTGTTTAGCTGGCAAAACATGAGCTCTCCC...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCACACAGAACTATTATTaGACTGTGCCTTCCACACGG +
Preference number: 5 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSTQNYY*TVPSTR
Trigger: CCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCACACAGAACTATTATTaGACTGTGCCTTCCACACGG +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTTQNYY*TVPSTR
Trigger: CCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGT...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS TCA 90 bp AATGCCAAGAGCAAGGTGACTGATGACGAAGATGTGGAGAGAGAGTaGAGGGTCGACTGTGCACTTGTGATTTTTCCACCTGAATATGAT +
Preference number: 5 (lower is better)
Translates to: NAKSKVTDDEDVERE*RVDCALVIFPPEYD
Trigger: ATCATATTCAGGTGGAAAAATCACAAGTGCACAGTCGACCCTTCACTCTCTCTCCACATCTTCGTCATCAGTCACCTTGCTCTTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTYRGLV*EPKRDE
Trigger: TTCATCTCTCTTTGGTTCCAAAACCAGACCACGATA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCATCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKASPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCATTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKAFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTATTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYDCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCGGAACTGCTTCATTaGTGCGGATCATTCGAGATG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVISELLH*CGSFEM
Trigger: CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTLLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACACAACTTCAGATTCGTaGGCTAATGGTATGACGGGT +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHTTSDS*ANGMTG
Trigger: ACCCGTCATACCATTAGCCAACGAATCTGAAGTTGT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTAACAACTTCAGATTCGTaGGCTAATGGTATGACGGGT +
Preference number: 5 (lower is better)
Translates to: LISGSWFSTYTTLYSPLLTTSDS*ANGMTG
Trigger: ACCCGTCATACCATTAGCCAACGAATCTGAAGTTGT...TAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAACAACTTCAGATTCGTaGGCTAATGGTATGACGGGT +
Preference number: 5 (lower is better)
Translates to: PGSPLTLHSIHRCYQAKATTSDS*ANGMTG
Trigger: ACCCGTCATACCATTAGCCAACGAATCTGAAGTTGT...TGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 90 bp CTGTACATTCGGTATTTCCAGCACCGCCTGAGATTTCCGCAGACGTaGCTTACTAGGAATATAACCATTAACCTTCATCCATGTGATTGT +
Preference number: 5 (lower is better)
Translates to: LYIRYFQHRLRFPQT*LTRNITINLHPCDC
Trigger: ACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVISPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATAAGAGATGGTTGGTTTaGGAGAGCCTTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDKRWLV*ESLGVC
Trigger: GCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTCTTCCAAGAGATGGTaGGTTTTGGAGAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDSSKRW*VLESLG
Trigger: CCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCATTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDDCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATCAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANDTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp GCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCTCATTCCCTCTAGTTTaGACTGTTTCTGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: AQAHLRILVLHLHYTLFTSFPLV*TVSAVS
Trigger: AGATACAGCAGAAACAGTCAAAACTAGAGGGAATGA...GGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAACTAGGAGGGGATTTCTaGGTGGTTGCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKLGGDF*VVALTS
Trigger: TGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAG...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGAGGTTGCTAGGTGCTaGACTAGGAGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKEVARC*TRRGFL
Trigger: AAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTC...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAGAGGTTGCTAGGTGCTaGACTAGGAGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTEVARC*TRRGFL
Trigger: AAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTC...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAGAGGTTGCTAGGTGCTaGACTAGGAGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKEVARC*TRRGFL
Trigger: AAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTC...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTTAGCATCCCTGTTTTaGCAAAGTCCAGCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDLASLF*QSPASP
Trigger: GGGAGAGGCTGGACTTTGCAAAAACAGGGATGCTAA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGGGAGAGCTCATGTTTaGCCAGCTAAACAATTAGCA +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFGRAHV*PAKQLA
Trigger: TGCTAATTGTTTAGCTGGCAAAACATGAGCTCTCCC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATAGCTTTAATGGCACTTaGGCTGCCGCCTTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHSFNGT*AAAFSQ
Trigger: CTGCGAGAAGGCGGCAGCCAAAGTGCCATTAAAGCT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIYRGLV*EPKRDE
Trigger: TTCATCTCTCTTTGGTTCCAAAACCAGACCACGATA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFYRGLV*EPKRDE
Trigger: TTCATCTCTCTTTGGTTCCAAAACCAGACCACGATA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CAA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: MDHITEAFFICPAGLSIEGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATATCTGCAGAGGATGCTaGGGCCCTGATGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYICRGC*GPDAFK
Trigger: TTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGAT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAAAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGACTGTCTTTACTGTTaGCCAGCCCAGGGAAAATGG +
Preference number: 5 (lower is better)
Translates to: MDHITEAFFICPAGLSIEDCLYC*PAQGKW
Trigger: CCATTTTCCCTGGGCTGGCAAACAGTAAAGACAGTC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCCTGTCCCAATAGGGTaGGTGGCTACCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETPVPIG*VATTRN
Trigger: ATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGACACACTTGTCGCCTaGACATCTGTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: CTYLIMDHITEAFFICPADTLVA*TSVGAA
Trigger: TGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTC...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATGAGGTTGCTAGGTGCTaGACTAGGAGGGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYEVARC*TRRGFL
Trigger: AAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTC...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAGTTTTCACCAGGAAGTaGAAGGAATCATCAATGCCA +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSVFTRK*KESSMP
Trigger: TGGCATTGATGATTCCTTCAACTTCCTGGTGAAAAC...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGATATGTCCTGCTGGTTaGTCAATTGAAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: KLISGSWFSTYTTLYSPLICPAG*SIEIFS
Trigger: GCTGAATATTTCAATTGACAAACCAGCAGGACATAT...CAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAGGGAGAGCTCATGTTTaGCCAGCTAAACAATTAGCA +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLGRAHV*PAKQLA
Trigger: TGCTAATTGTTTAGCTGGCAAAACATGAGCTCTCCC...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACAAAGGTAAACTATACTaGGGAGAGCTCATGTTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSSSQDPGSPLTLHSIHKGKLY*GELMFC
Trigger: GCAAAACATGAGCTCTCCCAAGTATAGTTTACCTTT...GTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCATATTTTACTGGGCTTaGCTTTCTGAGAGTGTAAGT +
Preference number: 5 (lower is better)
Translates to: SGSWFSTYTTLYSPLLPSIFYWA*LSESVS
Trigger: ACTTACACTCTCAGAAAGCAAAGCCCAGTAAAATAT...GCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCGTCCAAAGTATGCTCTaGACAAAGGAACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFVQSML*TKELVS
Trigger: AGATACCAGTTCCTTTGTCAAGAGCATACTTTGGAC...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524871.6
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCGTCCAAAGTATGCTCTaGACAAAGGAACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIVQSML*TKELVS
Trigger: AGATACCAGTTCCTTTGTCAAGAGCATACTTTGGAC...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS GCA 90 bp TCGAACTTCAATAATATAGACTCCAGCATCTGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTCAATAACTTGGCTGTTGCTGTGACC +
Preference number: 5 (lower is better)
Translates to: SNFNNIDSSIWEWYY*LKFLCFNNLAVAVT
Trigger: GGTCACAGCAACAGCCAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 90 bp TACCCTAATTTGAGAACTAGCTGTTCCATCTCCTCCTTCACTATATaGTCGAACTTCAATAATATAGACTCCAGCATCTGGGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: YPNLRTSCSISSFTI*SNFNNIDSSIWEWY
Trigger: GTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTTCGAGCATATAGTGAAGGAGGAGATGGAACAGCTAGTTCTCAAATTAGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVINDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTTCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFSPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDSPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTATATTGTTTTCTTCAGTaGATTCAGTGCAAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLYCFLQ*IQCKSG
Trigger: CCCACTTTTGCACTGAATCAACTGAAGAAAACAATA...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGGAGAGCCTTGGGGTTaGCACTCTATGACAACTTCT +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANGEPWG*HSMTTS
Trigger: AGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTGGTTTTGGAGAGCCTaGGGGTTTGCACTCTATGAC +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANWFWRA*GFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATAAGAGATGGTTGGTTTaGGAGAGCCTTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANKRWLV*ESLGVC
Trigger: GCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTCTTCCAAGAGATGGTaGGTTTTGGAGAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANSSKRW*VLESLG
Trigger: CCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTCTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: CTYLIMDHITEAFFICPALLPLT*VGAVFG
Trigger: TCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAG...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATCAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCAGCCACGTGTTCCATaGGGTCTGAAAGCCACAATA +
Preference number: 5 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHQPRVP*GLKATI
Trigger: TATTGTGGCTTTCAGACCCAATGGAACACGTGGCTG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACAACTTCAGATTCGTaGGCTAATGGTATGACGGGT +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKTTSDS*ANGMTG
Trigger: ACCCGTCATACCATTAGCCAACGAATCTGAAGTTGT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATCTGCTGGTTTGTCAATaGAAATATTCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYLLVCQ*KYSAKG
Trigger: CCCTTTGGCTGAATATTTCAATTGACAAACCAGCAG...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AGGATCCTGGTTCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAATATGTCCTGCTGGTTaGTCAATTGAAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: RILVLHLHYTLFTAVTKLICPAG*SIEIFS
Trigger: GCTGAATATTTCAATTGACAAACCAGCAGGACATAT...TAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTTAGCATCCCTGTTTTaGCAAAGTCCAGCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANLASLF*QSPASP
Trigger: GGGAGAGGCTGGACTTTGCAAAAACAGGGATGCTAA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CTAAAGGCCAGTTACTTAACAAATGGATGGCACACACTCGGAGTCATCAGATATCCACAGTACCTTCATTaGGGTATGCAAAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: LKASYLTNGWHTLGVIRYPQYLH*GMQNFC
Trigger: GCAAAAGTTTTGCATACCCAAATGAAGGTACTGTGG...ATATCTGATGACTCCGAGTGTGTGCCATCCATTTGTTAAGTAACTGGCCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTACCACAGTACCTTCATTaGGGTATGCAAAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLPQYLH*GMQNFC
Trigger: GCAAAAGTTTTGCATACCCAAATGAAGGTACTGTGG...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAACACAGAACTATTATTaGACTGTGCCTTCCACACGG +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKTQNYY*TVPSTR
Trigger: CCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGT...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAA +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKYRGLV*EPKRDE
Trigger: TTCATCTCTCTTTGGTTCCAAAACCAGACCACGATA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000528682.5
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLNDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: LKLKLISGSWFSTYTTLYNDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...ATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKSPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTATTGTTGGAACGGGGTaGCCAAGTGCAAAGCATTCC +
Preference number: 5 (lower is better)
Translates to: CTYLIMDHITEAFFICPAIVGTG*PSAKHS
Trigger: GGAATGCTTTGCACTTGGCAACCCCGTTCCAACAAT...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCTATTGTTTTCTTCAGTaGATTCAGTGCAAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: KAQAHLRILVLHLHYTLFYCFLQ*IQCKSG
Trigger: CCCACTTTTGCACTGAATCAACTGAAGAAAACAATA...GAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCTATTGTTTTCTTCAGTaGATTCAGTGCAAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVIYCFLQ*IQCKSG
Trigger: CCCACTTTTGCACTGAATCAACTGAAGAAAACAATA...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS-3UTR CAA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATAAGAGATGGTTGGTTTaGGAGAGCCTTGGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYKRWLV*ESLGVC
Trigger: GCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGT +
Preference number: 5 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKFPSSD*EAFRIR
Trigger: ACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAA...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATAAATGGGCTGCGAGCTaGAAGGTTGTAGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYKWAAS*KVVGGD
Trigger: ATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACAACTTCAGATTCGTaGGCTAATGGTATGACGGGT +
Preference number: 5 (lower is better)
Translates to: MDHITEAFFICPAGLSIETTSDS*ANGMTG
Trigger: ACCCGTCATACCATTAGCCAACGAATCTGAAGTTGT...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTCTGCTGGTTTGTCAATaGAAATATTCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFLLVCQ*KYSAKG
Trigger: CCCTTTGGCTGAATATTTCAATTGACAAACCAGCAG...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAACTACAAGGATTAACCTaGAGAGCTAGCAATTTGAGC +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKLQGLT*RASNLS
Trigger: GCTCAAATTGCTAGCTCTCAAGGTTAATCCTTGTAG...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAAAAGGTAAACTATACTaGGGAGAGCTCATGTTTTGC +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLKGKLY*GELMFC
Trigger: GCAAAACATGAGCTCTCCCAAGTATAGTTTACCTTT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAATATTTTACTGGGCTTaGCTTTCTGAGAGTGTAAGT +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSIFYWA*LSESVS
Trigger: ACTTACACTCTCAGAAAGCAAAGCCCAGTAAAATAT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTATTCAAATATATTTAACAGTTaGACATGGGGTCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: KLKLISGSWFSTYTTLYSNIFNS*TWGPQY
Trigger: GTACTGTGGACCCCATGTCAAACTGTTAAATATATT...TGAATAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CAAGCAAGGCAAGAACAAGAACAAGAGCTGTGTGAGAAGCCAAACCTTGTTATCAATGCAACTAAAGTCTaGGGTCAGATGCTAATTCTT +
Preference number: 5 (lower is better)
Translates to: QARQEQEQELCEKPNLVINATKV*GQMLIL
Trigger: AAGAATTAGCATCTGACCCAAGACTTTAGTTGCATT...GATAACAAGGTTTGGCTTCTCACACAGCTCTTGTTCTTGTTCTTGCCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527185.5
CDS TCA 90 bp ATTCGTCACTGTGTTTTTCACCAGACAAATATAGCTGCCAACATCTaGTGTTTGGACTTTAGAAATATAAAGGTTGCCTGTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: IRHCVFHQTNIAANI*CLDFRNIKVACLLG
Trigger: TCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGAAAAACACAGTGACGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000525236.1
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 90 bp TTTCAGAGTCCAGTAGAAAGTGACATCCAAACTAGCATCGTGAATTaGTTTGCAATTAAGGACAATGCTTTCTCCCACTGTCAATTCTGT +
Preference number: 5 (lower is better)
Translates to: FQSPVESDIQTSIVN*FAIKDNAFSHCQFC
Trigger: ACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTTGCTTCACTTGGATaGCTTATAATGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKFASLG*LIMKVP
Trigger: TGGCACCTTCATTATAAGCAATCCAAGTGAAGCAAA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACAAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTNDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTCCCCACAGTGTTGGTaGCTAAACACTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANSPQCW*LNTDND
Trigger: GTCATTATCAGTGTTTAGCAACCAACACTGTGGGGA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TGTACTTATCTTATAATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTTCGGAACTGCTTCATTaGTGCGGATCATTCGAGATG +
Preference number: 5 (lower is better)
Translates to: CTYLIMDHITEAFFICPASELLH*CGSFEM
Trigger: CATCTCGAATGATCCGCACAAATGAAGCAGTTCCGA...AGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCATTATAAGATAAGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCTGATGGATTCATTCCCTCTAGTTTaGACTGTTTCTGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: WTKNCPLRLQKPKRNLMDSFPLV*TVSAVS
Trigger: AGATACAGCAGAAACAGTCAAAACTAGAGGGAATGA...ATCCATCAGGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp AAGTTTTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACATCATTCCCTCTAGTTTaGACTGTTTCTGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: KFLKLKLISGSWFSTYTTSFPLV*TVSAVS
Trigger: AGATACAGCAGAAACAGTCAAAACTAGAGGGAATGA...TGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATCATTCCCTCTAGTTTaGACTGTTTCTGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKSFPLV*TVSAVS
Trigger: AGATACAGCAGAAACAGTCAAAACTAGAGGGAATGA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAGTTTTCACCAGGAAGTaGAAGGAATCATCAATGCCA +
Preference number: 5 (lower is better)
Translates to: MDHITEAFFICPAGLSIEVFTRK*KESSMP
Trigger: TGGCATTGATGATTCCTTCAACTTCCTGGTGAAAAC...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATGTTTTCACCAGGAAGTaGAAGGAATCATCAATGCCA +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYVFTRK*KESSMP
Trigger: TGGCATTGATGATTCCTTCAACTTCCTGGTGAAAAC...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAACTGCTGGTTTGTCAATaGAAATATTCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: WTTSLKHFSYVLLVCQLKLLVCQ*KYSAKG
Trigger: CCCTTTGGCTGAATATTTCAATTGACAAACCAGCAG...TTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTTAAAGCTCAAGCTCATCTCAGGATCCTGGTTCTCCACTTACACTACACTCTAATATGTCCTGCTGGTTaGTCAATTGAAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: FKAQAHLRILVLHLHYTLICPAG*SIEIFS
Trigger: GCTGAATATTTCAATTGACAAACCAGCAGGACATAT...TAGAGTGTAGTGTAAGTGGAGAACCAGGATCCTGAGATGAGCTTGAGCTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATCCACAGTACCTTCATTaGGGTATGCAAAACTTTTGC +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYPQYLH*GMQNFC
Trigger: GCAAAAGTTTTGCATACCCAAATGAAGGTACTGTGG...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS CCA 90 bp TCCTTCACTATATGCTCGAACTTCAATAATATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTGAAGTTTCTGTGTTTCAATAACTTG +
Preference number: 5 (lower is better)
Translates to: SFTICSNFNNIDSSI*EWYYCLKFLCFNNL
Trigger: CAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTTCGAGCATATAGTGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYNDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCCCATATTCATCTCATTTTTAAGTTAGCACCCATGCCAGCATGTCTGCAGTTTTATTGTTTTCTTCAGTaGATTCAGTGCAAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SHIHLIFKLAPMPACLQFYCFLQ*IQCKSG
Trigger: CCCACTTTTGCACTGAATCAACTGAAGAAAACAATA...AAACTGCAGACATGCTGGCATGGGTGCTAACTTAAAAATGAGATGAATATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATGTTTTCACCAGGAAGTaGAAGGAATCATCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANVFTRK*KESSMP
Trigger: TGGCATTGATGATTCCTTCAACTTCCTGGTGAAAAC...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCTGCTGGTTTGTCAATaGAAATATTCAGCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETLLVCQ*KYSAKG
Trigger: CCCTTTGGCTGAATATTTCAATTGACAAACCAGCAG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp CTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAATTGAGAGCTAGCAATTaGAGCTCCATATTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LHLHYTLFTAVTKLKQTKLRASN*SSILFH
Trigger: ATGAAACAATATGGAGCTCAAATTGCTAGCTCTCAA...TTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATCTACAAGGATTAACCTaGAGAGCTAGCAATTTGAGC +
Preference number: 5 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHLQGLT*RASNLS
Trigger: GCTCAAATTGCTAGCTCTCAAGGTTAATCCTTGTAG...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCCTACAAGGATTAACCTaGAGAGCTAGCAATTTGAGC +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETLQGLT*RASNLS
Trigger: GCTCAAATTGCTAGCTCTCAAGGTTAATCCTTGTAG...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TCTCCACTTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAATATATTTAACAGTTaGACATGGGGTCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: SPLTLHSIHRCYQAKANKNIFNS*TWGPQY
Trigger: GTACTGTGGACCCCATGTCAAACTGTTAAATATATT...TTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAAGTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS TCA 90 bp ATGACAACTTCTTGGTCTTTGGTAACAATTATTGTTTTCTTCAGTTaGTTCAGTGCAAAAGTGGGAGCTGAAGCTAGAATCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: MTTSWSLVTIIVFFS*FSAKVGAEARIFSS
Trigger: TGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTACCAAAGACCAAGAAGTTGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000527682.1
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 90 bp CCATCTGTAACTGGGAACTGGATTGCCACGAACTTCACAATTCAATaGTACCTTCTTTTCATCAGAATCAGTTGGAAAAATAATATCATC +
Preference number: 5 (lower is better)
Translates to: PSVTGNWIATNFTIQ*YLLFIRISWKNNII
Trigger: GATGATATTATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCATTGAATTGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTCATTCCCTCTAGTTTaGACTGTTTCTGCTGTATCT +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANSFPLV*TVSAVS
Trigger: AGATACAGCAGAAACAGTCAAAACTAGAGGGAATGA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp CAGTACACAGAACTATTATTTGACTGTGCCTTCCACACGGTATATGCCTTATATTTGAGAGCTAGCAATTaGAGCTCCATATTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QYTELLFDCAFHTVYALYLRASN*SSILFH
Trigger: ATGAAACAATATGGAGCTCAAATTGCTAGCTCTCAA...ATATAAGGCATATACCGTGTGGAAGGCACAGTCAAATAATAGTTCTGTGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATGGACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAATTGAGAGCTAGCAATTaGAGCTCCATATTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: MDHITEAFFICPAGLSIELRASN*SSILFH
Trigger: ATGAAACAATATGGAGCTCAAATTGCTAGCTCTCAA...TTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATAAAGGTAAACTATACTaGGGAGAGCTCATGTTTTGC +
Preference number: 5 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHKGKLY*GELMFC
Trigger: GCAAAACATGAGCTCTCCCAAGTATAGTTTACCTTT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACCACATCACTGAAGCATTTTTCATATGTCCTGCTGGTTTGTCAATTGAAATATAATGACCAGAATCCTTaGCTTCACTTGGATTGCTTA +
Preference number: 5 (lower is better)
Translates to: TTSLKHFSYVLLVCQLKYNDQNP*LHLDCL
Trigger: TAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATT...ATATTTCAATTGACAAACCAGCAGGACATATGAAAAATGCTTCAGTGATGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATTATTGTTTTCTTCAGTaGATTCAGTGCAAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANYCFLQ*IQCKSG
Trigger: CCCACTTTTGCACTGAATCAACTGAAGAAAACAATA...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS-3UTR CAA 90 bp TTACACTACACTCTATTCACCGCTGTTACCAAGCTAAAGCAAACAAAAGCAAATATATGTCCTGCTGGTTaGTCAATTGAAATATTCAGC +
Preference number: 5 (lower is better)
Translates to: LHYTLFTAVTKLKQTKANICPAG*SIEIFS
Trigger: GCTGAATATTTCAATTGACAAACCAGCAGGACATAT...ATTTGCTTTTGTTTGCTTTAGCTTGGTAACAGCGGTGAATAGAGTGTAGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ACAAATGGATGGCACACACTCGGAGTCATCAGATATAAAATAAAATCCCAACATATATTTTACTGGGCTTaGCTTTCTGAGAGTGTAAGT +
Preference number: 5 (lower is better)
Translates to: TNGWHTLGVIRYKIKSQHIFYWA*LSESVS
Trigger: ACTTACACTCTCAGAAAGCAAAGCCCAGTAAAATAT...ATGTTGGGATTTTATTTTATATCTGATGACTCCGAGTGTGTGCCATCCATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS-3UTR CAA 90 bp ATTTTTACTGGACTAAGAACTGTCCTCTCCGTTTACAAAAACCAAAGAGAAACCAATATATTTAACAGTTaGACATGGGGTCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: IFTGLRTVLSVYKNQRETNIFNS*TWGPQY
Trigger: GTACTGTGGACCCCATGTCAAACTGTTAAATATATT...GGTTTCTCTTTGGTTTTTGTAAACGGAGAGGACAGTTCTTAGTCCAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000619298.1
CDS CCA 72 bp CCGCCTTCTCGCAGTTCCGCTCCCCCACGCCGTAGTTaGTTATATTGGGAAGTAGGTGCGGCGCCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: PPSRSSAPPRRS*LYWEVGAAPPA
Trigger: CGCAGGAGGCGCCGCACCTACTTCCCAATATAACCAACTACGGCGTGGGGGAGCGGAACTGCGAGAAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524871.6
ENST00000525047.1
CDS CCA 72 bp AACGCATCCTCTCCGCCCCGAGCTTTAATGGCACTTTaGCTGCCGCCTTCTCGCAGTTCCGCTCCCCCACGC +
Preference number: 6 (lower is better)
Translates to: NASSPPRALMAL*LPPSRSSAPPR
Trigger: GCGTGGGGGAGCGGAACTGCGAGAAGGCGGCAGCCAAAGTGCCATTAAAGCTCGGGGCGGAGAGGATGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS TCA 72 bp GCCTGGGGGTCCCCTAACAAGAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGTCTGTACCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: AWGSPNKKFCLI*HTVCCGLYPAA
Trigger: GGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTTGTTAGGGGACCCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp GAATGTGGCGGAGGAGAGCACATCAGAACGACACCCTaGCCTTCCCTCACAGAGACTGCACTTCTTGTCCGG +
Preference number: 6 (lower is better)
Translates to: ECGGGEHIRTTP*PSLTETALLVR
Trigger: CCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATGTGCTCTCCTCCGCCACATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 72 bp AAGGTTGTAGGAGGAGATTGGGCTGTGGTTGTCAGCTaGTGGGCTCCAGGACAGTGTGGCCGTACTTTCGGT +
Preference number: 6 (lower is better)
Translates to: KVVGGDWAVVVS*WAPGQCGRTFG
Trigger: ACCGAAAGTACGGCCACACTGTCCTGGAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CAA 72 bp TCAGCACAGTTCAGAGAGAGCGGTTCCTCGGGTCCTTaGCAGCCTGTGGCAGAGGCGAATTGCGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: SAQFRESGSSGP*QPVAEANCGVL
Trigger: AAGAACTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACCGCTCTCTCTGAACTGTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS GCA 72 bp CTGAGAGCCTTGCTGCTCCCACCTGAGGTTGCTAGGTaGTTGACTAGGAGGGGATTTCTTGGTGGTTGCACT +
Preference number: 6 (lower is better)
Translates to: LRALLLPPEVAR*LTRRGFLGGCT
Trigger: AGTGCAACCACCAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGGTGGGAGCAGCAAGGCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CAA 90 bp TCCTGCCCATCAGCACAGTTCAGAGAGAGCGGTTCCTCGGGTCCTTaGCAGCCTGTGGCAGAGGCGAATTGCGGAGTTCTTAATCATTCA +
Preference number: 6 (lower is better)
Translates to: SCPSAQFRESGSSGP*QPVAEANCGVLNHS
Trigger: TGAATGATTAAGAACTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACCGCTCTCTCTGAACTGTGCTGATGGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS GCA 72 bp GCTAGGTGCTTGACTAGGAGGGGATTTCTTGGTGGTTaGACTCACTTCACTGCTAGGTGGCCCATATCCAGC +
Preference number: 6 (lower is better)
Translates to: ARCLTRRGFLGG*THFTARWPISS
Trigger: GCTGGATATGGGCCACCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAGTCAAGCACCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 72 bp TCCTCGGGTCCTTTGCAGCCTGTGGCAGAGGCGAATTaGGGAGTTCTTAATCATTCAGAGGGAATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SSGPLQPVAEAN*GVLNHSEGILQ
Trigger: CTGGAGGATTCCCTCTGAATGATTAAGAACTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGACCCGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS CCA 72 bp TCAGAGAGAGCGGTTCCTCGGGTCCTTTGCAGCCTGTaGCAGAGGCGAATTGCGGAGTTCTTAATCATTCAG +
Preference number: 6 (lower is better)
Translates to: SERAVPRVLCSL*QRRIAEFLIIQ
Trigger: CTGAATGATTAAGAACTCCGCAATTCGCCTCTGCCACAGGCTGCAAAGGACCCGAGGAACCGCTCTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000525047.1
ENST00000528727.5
CDS TCA 72 bp AGCATACTCACCCCTAACAAGAAGTTCTGCCTCATCTaGCACACTGTCTGCTGTGGTCTGTACCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SILTPNKKFCLI*HTVCCGLYPAA
Trigger: GGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTTGTTAGGGGTGAGTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528727.5
CDS CCA 72 bp TGCTTCATTTGTGCGGATCATTCGAGATGGGGTGCTTaGATCTCCTGTCCCAATAGGGTTGGTGGCTACCAC +
Preference number: 6 (lower is better)
Translates to: CFICADHSRWGA*ISCPNRVGGYH
Trigger: GTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGAATGATCCGCACAAATGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS GCA 72 bp CATCAGAACGACACCCTGGCCTTCCCTCACAGAGACTaGACTTCTTGTCCGGCCACTAAAATTTCCCAGATA +
Preference number: 6 (lower is better)
Translates to: HQNDTLAFPHRD*TSCPATKISQI
Trigger: TATCTGGGAAATTTTAGTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CCA 72 bp CTTCGGAACTGCTTCATTTGTGCGGATCATTCGAGATaGGGTGCTTGGATCTCCTGTCCCAATAGGGTTGGT +
Preference number: 6 (lower is better)
Translates to: LRNCFICADHSR*GAWISCPNRVG
Trigger: ACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGAATGATCCGCACAAATGAAGCAGTTCCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp GGATTTCTTGGTGGTTGCACTCACTTCACTGCTAGGTaGCCCATATCCAGCTCCATTGTAAGCCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: GFLGGCTHFTAR*PISSSIVSPHC
Trigger: ACAGTGAGGGCTTACAATGGAGCTGGATATGGGCCACCTAGCAGTGAAGTGAGTGCAACCACCAAGAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS TCA 72 bp TGTAACCCACAACTTCAGATTCGTTGGCTAATGGTATaGCGGGTTCCCAGCCCAGAGAAACCTGAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: CNPQLQIRWLMV*RVPSPEKPESL
Trigger: AAGGCTCTCAGGTTTCTCTGGGCTGGGAACCCGTCATACCATTAGCCAACGAATCTGAAGTTGTGGGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp TCCCATCACACCATCATTACGCAGAGTGAGTGGCGTTaGAGGACTAAGGACTCTAGCATTCGTCACTGTGTT +
Preference number: 6 (lower is better)
Translates to: SHHTIITQSEWR*RTKDSSIRHCV
Trigger: AACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000525236.1
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CCA 72 bp TTTCCCCTCGGCAAACGTACTTTCCCTCGTCTGATTTaGAAGCATTTAGGATCCGTAGACTCCCGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: FPLGKRTFPRLI*KHLGSVDSRLE
Trigger: TTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CCA 72 bp ACTTTCGGTTATTTCCTCAACAATTACTATCCCAGGTaGGCCTGGGGGTCCCCTAACAAGAAGTTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: TFGYFLNNYYPR*AWGSPNKKFCL
Trigger: GAGGCAGAACTTCTTGTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp ACTCATGCCTTCTTCCACTTCTTCCGCTTACATTGGTaGGTGCTGTCTTCGGAACTGCTTCATTTGTGCGGA +
Preference number: 6 (lower is better)
Translates to: THAFFHFFRLHW*VLSSELLHLCG
Trigger: TCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CAA 72 bp TTTTCCCCTCGGCAAACGTACTTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGTAGACTCCCGTCTGGA +
Preference number: 6 (lower is better)
Translates to: FSPRQTYFPSSD*EAFRIRRLPSG
Trigger: TCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CAA 90 bp CCAAAGACGTTTTCCCCTCGGCAAACGTACTTTCCCTCGTCTGATTaGGAAGCATTTAGGATCCGTAGACTCCCGTCTGGAAGAATAGCT +
Preference number: 6 (lower is better)
Translates to: PKTFSPRQTYFPSSD*EAFRIRRLPSGRIA
Trigger: AGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAAATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 72 bp TGGGTGAAGAAGCACTCAGTGTTCCTAATGAAGGGCTaGTGTATCGTGGTCTGGTTTTGGAACCAAAGAGAG +
Preference number: 6 (lower is better)
Translates to: WVKKHSVFLMKG*CIVVWFWNQRE
Trigger: CTCTCTTTGGTTCCAAAACCAGACCACGATACAGCAGCCCTTCATTAGGAACACTGAGTGCTTCTTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
CDS GCA 72 bp GCTGTGGTCTGTACCCTGCAGCCATATCTCCCAGCATaGATCAGAAGGATGTTCCTGATCATTAAATCTGCA +
Preference number: 6 (lower is better)
Translates to: AVVCTLQPYLPA*IRRMFLIIKSA
Trigger: TGCAGATTTAATGATCAGGAACATCCTTCTGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 72 bp ATGCCTTCTTCCACTTCTTCCGCTTACATTGGTGGGTaGTGTCTTCGGAACTGCTTCATTTGTGCGGATCAT +
Preference number: 6 (lower is better)
Translates to: MPSSTSSAYIGG*CLRNCFICADH
Trigger: ATGATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS GCA 72 bp TCTTCAGATACTGGCTCCCAGGCAATGACTAACTCATaGCTTCTTCCACTTCTTCCGCTTACATTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: SSDTGSQAMTNS*LLPLLPLTLVG
Trigger: ACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGTTAGTCATTGCCTGGGAGCCAGTATCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp ATATTCTCCCATCACACCATCATTACGCAGAGTGAGTaGCGTTGGAGGACTAAGGACTCTAGCATTCGTCAC +
Preference number: 6 (lower is better)
Translates to: IFSHHTIITQSE*RWRTKDSSIRH
Trigger: GTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000525236.1
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CCA 72 bp CTAACTCATGCCTTCTTCCACTTCTTCCGCTTACATTaGTGGGTGCTGTCTTCGGAACTGCTTCATTTGTGC +
Preference number: 6 (lower is better)
Translates to: LTHAFFHFFRLH*WVLSSELLHLC
Trigger: GCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp ACTTTCGGTTATTTCCTCAACAATTACTATCCCAGGTaGGCCTGGGGGTCGGCCCTGATGCTTTCAAAATGT +
Preference number: 6 (lower is better)
Translates to: TFGYFLNNYYPR*AWGSALMLSKC
Trigger: ACATTTTGAAAGCATCAGGGCCGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524560.1
CDS CAA 90 bp CAGGCAATGACTAACTCATGCCTTCTTCCACTTCTTCCGCTTACATaGGTGGGTGCTGTCTTCGGAACTGCTTCATTTGTGCGGATCATT +
Preference number: 6 (lower is better)
Translates to: QAMTNSCLLPLLPLT*VGAVFGTASFVRII
Trigger: AATGATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGTTAGTCATTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS TCA 72 bp AGGAAGTTGAAGGAATCATCAATGCCAAGAGCAAGGTaGCTGATGACGAAGATGTGGAGAGAGAGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: RKLKESSMPRAR*LMTKMWRESEG
Trigger: CCCTTCACTCTCTCTCCACATCTTCGTCATCAGTCACCTTGCTCTTGGCATTGATGATTCCTTCAACTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 72 bp CGGTATTTCCAGCACCGCCTGAGATTTCCGCAGACGTaGCTTACTAGGAATATAACCATTAACCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: RYFQHRLRFPQT*LTRNITINLHP
Trigger: TGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCACGTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CCA 72 bp TCTAACTGCTCTGTCTCCTTTCTTCCAAGAGATGGTTaGTTTTGGAGAGCCTTGGGGTTTGCACTCTATGAC +
Preference number: 6 (lower is better)
Translates to: SNCSVSFLPRDG*FWRALGFALYD
Trigger: GTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGAGACAGAGCAGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000527682.1
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS TCA 72 bp ACTCTCTTTAATGTGTTTCCATGCAACAAGAATCTCTaGCACAGACACACTTGTCGCCTTGACATCTGTGGG +
Preference number: 6 (lower is better)
Translates to: TLFNVFPCNKNL*HRHTCRLDICG
Trigger: CCCACAGATGTCAAGGCGACAAGTGTGTCTGTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp TCAGTGTTCCTAATGAAGGGCTGCTGTATCGTGGTCTaGTTTTGGAACCAAAGAGAGATGAAGATGAACTCT +
Preference number: 6 (lower is better)
Translates to: SVFLMKGCCIVV*FWNQREMKMNS
Trigger: AGAGTTCATCTTCATCTCTCTTTGGTTCCAAAACCAGACCACGATACAGCAGCCCTTCATTAGGAACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
CDS TCA 72 bp GTGGCCCATATCCAGCTCCATTGTAAGCCCTCACTGTaGAGTGATATAACGTATTTCCTTCTAATCCTGTTA +
Preference number: 6 (lower is better)
Translates to: VAHIQLHCKPSL*SDITYFLLILL
Trigger: TAACAGGATTAGAAGGAAATACGTTATATCACTTCACAGTGAGGGCTTACAATGGAGCTGGATATGGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp TTCTGTTCCATTTCGAAGCCATCTGTAACTGGGAACTaGATTGCCACGAACTTCACAATTCAATGCTACCTT +
Preference number: 6 (lower is better)
Translates to: FCSISKPSVTGN*IATNFTIQCYL
Trigger: AAGGTAGCATTGAATTGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTCGAAATGGAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CAA 72 bp GTTCCTAATGAAGGGCTGCTGTATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAAGATGAACTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: VPNEGLLYRGLV*EPKRDEDELFL
Trigger: TAAGAAGAGTTCATCTTCATCTCTCTTTGGTTCCAAAACCAGACCACGATACAGCAGCCCTTCATTAGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
CDS CAA 90 bp GCACTCAGTGTTCCTAATGAAGGGCTGCTGTATCGTGGTCTGGTTTaGGAACCAAAGAGAGATGAAGATGAACTCTTCTTAATTCTTAAC +
Preference number: 6 (lower is better)
Translates to: ALSVPNEGLLYRGLV*EPKRDEDELFLILN
Trigger: GTTAAGAATTAAGAAGAGTTCATCTTCATCTCTCTTTGGTTCCAAAACCAGACCACGATACAGCAGCCCTTCATTAGGAACACTGAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279463.7
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
CDS CAA 90 bp AACTTCAATAATATAGACTCCAGCATCTGGGAGTGGTACTACTGCTaGAAGTTTCTGTGTTTCAATAACTTGGCTGTTGCTGTGACCCTC +
Preference number: 6 (lower is better)
Translates to: NFNNIDSSIWEWYYC*KFLCFNNLAVAVTL
Trigger: GAGGGTCACAGCAACAGCCAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS GCA 72 bp TTCCATTTCGAAGCCATCTGTAACTGGGAACTGGATTaGCACGAACTTCACAATTCAATGCTACCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: FHFEAICNWELD*HELHNSMLPSF
Trigger: AAAAGAAGGTAGCATTGAATTGTGAAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTCGAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 72 bp CCAGTAGAAAGTGACATCCAAACTAGCATCGTGAATTaGTTTGCAATTAAGGACAATGCTTTCTCCCACTGT +
Preference number: 6 (lower is better)
Translates to: PVESDIQTSIVN*FAIKDNAFSHC
Trigger: ACAGTGGGAGAAAGCATTGTCCTTAATTGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS CAA 72 bp AATATAGACTCCAGCATCTGGGAGTGGTACTACTGCTaGAAGTTTCTGTGTTTCAATAACTTGGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: NIDSSIWEWYYC*KFLCFNNLAVA
Trigger: AGCAACAGCCAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp ATATGCTCGAACTTCAATAATATAGACTCCAGCATCTaGGAGTGGTACTACTGCTTGAAGTTTCTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: ICSNFNNIDSSI*EWYYCLKFLCF
Trigger: GAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTTCGAGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS TCA 72 bp TTAGAAAGGACACCAAGTGATAAACAGAGACCTTCTTaGGTGAAGCAGTCTTCTTTACACTCCCTTTTATGT +
Preference number: 6 (lower is better)
Translates to: LERTPSDKQRPS*VKQSSLHSLLC
Trigger: ACATAAAAGGGAGTGTAAAGAAGACTGCTTCACTCAAGAAGGTCTCTGTTTATCACTTGGTGTCCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525236.1
CDS GCA 72 bp ACTGGGAACTGGATTGCCACGAACTTCACAATTCAATaGTACCTTCTTTTCATCAGAATCAGTTGGAAAAAT +
Preference number: 6 (lower is better)
Translates to: TGNWIATNFTIQ*YLLFIRISWKN
Trigger: ATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCATTGAATTGTGAAGTTCGTGGCAATCCAGTTCCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524871.6
ENST00000527185.5
ENST00000528682.5
ENST00000528727.5
ENST00000619298.1
CDS GCA 72 bp AATAATATAGACTCCAGCATCTGGGAGTGGTACTACTaGTTGAAGTTTCTGTGTTTCAATAACTTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: NNIDSSIWEWYY*LKFLCFNNLAV
Trigger: AACAGCCAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CCA 72 bp TCGAACTTCAATAATATAGACTCCAGCATCTGGGAGTaGTACTACTGCTTGAAGTTTCTGTGTTTCAATAAC +
Preference number: 6 (lower is better)
Translates to: SNFNNIDSSIWE*YYCLKFLCFNN
Trigger: GTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCAGATGCTGGAGTCTATATTATTGAAGTTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279463.7
ENST00000418526.6
ENST00000524560.1
ENST00000524871.6
ENST00000528682.5
ENST00000619298.1
CDS CAA 72 bp GCTCTAGTCATTTGCTTAAGATGTAGCTTCCTAGGATaGCAGAATTTGGTGTACTGTTTCATAACTGGAAAC +
Preference number: 6 (lower is better)
Translates to: ALVICLRCSFLG*QNLVYCFITGN
Trigger: GTTTCCAGTTATGAAACAGTACACCAAATTCTGCAATCCTAGGAAGCTACATCTTAAGCAAATGACTAGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528727.5
CDS CAA 90 bp GAAATGGGTGCTCTAGTCATTTGCTTAAGATGTAGCTTCCTAGGATaGCAGAATTTGGTGTACTGTTTCATAACTGGAAACCATTTAACT +
Preference number: 6 (lower is better)
Translates to: EMGALVICLRCSFLG*QNLVYCFITGNHLT
Trigger: AGTTAAATGGTTTCCAGTTATGAAACAGTACACCAAATTCTGCAATCCTAGGAAGCTACATCTTAAGCAAATGACTAGAGCACCCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528727.5
CDS TCA 72 bp AAAGGACACCAAGTGATAAACAGAGACCTTCTTGAGTaGAGCAGTCTTCTTTACACTCCCTTTTATGTATTT +
Preference number: 6 (lower is better)
Translates to: KGHQVINRDLLE*SSLLYTPFYVF
Trigger: AAATACATAAAAGGGAGTGTAAAGAAGACTGCTTCACTCAAGAAGGTCTCTGTTTATCACTTGGTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525236.1
CDS CAA 90 bp GCTCTAGTCATTTGCTTAAGATGTAGCTTCCTAGGATTGCAGAATTaGGTGTACTGTTTCATAACTGGAAACCATTTAACTGTCATTTCT +
Preference number: 6 (lower is better)
Translates to: ALVICLRCSFLGLQN*VYCFITGNHLTVIS
Trigger: AGAAATGACAGTTAAATGGTTTCCAGTTATGAAACAGTACACCAAATTCTGCAATCCTAGGAAGCTACATCTTAAGCAAATGACTAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528727.5
CDS TCA 72 bp TGCAGTAGTCATGCAAAAATGATGCTTAGTAGATCTTaGATGGCATTAAATGGCAATCCTTTAAAGACACCA +
Preference number: 6 (lower is better)
Translates to: CSSHAKMMLSRS*MALNGNPLKTP
Trigger: TGGTGTCTTTAAAGGATTGCCATTTAATGCCATTCAAGATCTACTAAGCATCATTTTTGCATGACTACTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524871.6
ENST00000527185.5
ENST00000528727.5
CDS GCA 72 bp CTGTTTCATAACTGGAAACCATTTAACTGTCATTTCTaGATAGAGAGGTTGTATGTTGACATTTTCAGACTT +
Preference number: 6 (lower is better)
Translates to: LFHNWKPFNCHF*IERLYVDIFRL
Trigger: AAGTCTGAAAATGTCAACATACAACCTCTCTATGCAGAAATGACAGTTAAATGGTTTCCAGTTATGAAACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528727.5