RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNKSR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149970

Ensembl transcript IDs: ENST00000279451.9, ENST00000379510.5, ENST00000425654.7, ENST00000479158.2, ENST00000480138.2, ENST00000485012.2, ENST00000543067.6, ENST00000642359.1, ENST00000642460.1, ENST00000642501.1, ENST00000642565.1, ENST00000642853.1, ENST00000643156.1, ENST00000643171.1, ENST00000643220.1, ENST00000643309.1, ENST00000643313.1, ENST00000643484.1, ENST00000643841.1, ENST00000644075.1, ENST00000644095.1, ENST00000644295.1, ENST00000644585.1, ENST00000644789.1, ENST00000644798.1, ENST00000644832.1, ENST00000645038.1, ENST00000645074.1, ENST00000645238.1, ENST00000645245.1, ENST00000645679.1, ENST00000645791.1, ENST00000646175.1, ENST00000646697.1, ENST00000647058.1, ENST00000647423.1, ENST00000647532.1

Found 2490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTCCCCTTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGC +
Preference number: 1 (lower is better)
Translates to: CLPFLLLLLLLFLHL*GLHVILWVTGTNWS
Trigger: GCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR CCA 90 bp CAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGG +
Preference number: 1 (lower is better)
Translates to: QVAFLSWQGRLPPVL*GDGRGVREDRILQG
Trigger: CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR GCA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAA +
Preference number: 1 (lower is better)
Translates to: ASQLNPARSGADWLS*EWETLHCSQLLPGE
Trigger: TTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR TCA 90 bp GAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTT +
Preference number: 1 (lower is better)
Translates to: ELVSGVSIKSCQERR*LAVLRMGDTALLPV
Trigger: AACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CCA 90 bp CAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACTCCT +
Preference number: 1 (lower is better)
Translates to: QLNPARSGADWLSCE*ETLHCSQLLPGETP
Trigger: AGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CCA 90 bp TTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTT +
Preference number: 1 (lower is better)
Translates to: LSVASQLNPARSGAD*LSCEWETLHCSQLL
Trigger: AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGCCACTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR GCA 90 bp AGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTaGTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTGG +
Preference number: 1 (lower is better)
Translates to: RLRLRSLRGGKSAMF*FHIRTGATHRGRSW
Trigger: CCACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR CCA 90 bp CCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGC +
Preference number: 1 (lower is better)
Translates to: PGETPHEKTETEKSP*RKVGYVLLPHKDWR
Trigger: GCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CCA 90 bp TCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTG +
Preference number: 1 (lower is better)
Translates to: SSCGSQALTGAFRQQ*LNPLSRGRVKLRGL
Trigger: CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR TCA 90 bp TGTGCCGAGGGAGGGTCATTTATGGCTGTGTCATACTTGACGGGGTaGAAGAAGATCCTCTTTATTGTCCCTTTCATATTCTGCTCCACT +
Preference number: 1 (lower is better)
Translates to: CAEGGSFMAVSYLTG*KKILFIVPFIFCST
Trigger: AGTGGAGCAGAATATGAAAGGGACAATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGACACAGCCATAAATGACCCTCCCTCGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR TCA 90 bp GTGATTCAGATCCCTTATGCACTGGCTTGCCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGTTTCCTTTTTCATCCCTGGGAATAT +
Preference number: 1 (lower is better)
Translates to: VIQIPYALACPPYVL*GLHKEGFLFHPWEY
Trigger: ATATTCCCAGGGATGAAAAAGGAAACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR TCA 90 bp TGGGTATGTATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGTTaGTGGAGTATCTGCTTCTTCCTTGTCACTCTCACTCCAGTAATC +
Preference number: 1 (lower is better)
Translates to: WVCIIWGWRAILFWC*WSICFFLVTLTPVI
Trigger: GATTACTGGAGTGAGAGTGACAAGGAAGAAGCAGATACTCCATCAACACCAAAACAAGATAGCCCTCCACCCCCATATGATACATACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR GCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGACTCTCT +
Preference number: 1 (lower is better)
Translates to: KSVFCYKQQGRGHFS*LQEVDVESAPYRLS
Trigger: AGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CCA 90 bp ATTCCATCTTGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGTATAAATCTTGCAATGAGTCTCCTA +
Preference number: 1 (lower is better)
Translates to: IPSWLKYDVLLVVTD*PAPVPCINLAMSLL
Trigger: TAGGAGACTCATTGCAAGATTTATACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGATGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR GCA 90 bp TTGTCCCACTCATATTTGCATTTCCCCTTCTTCTACCTGGCACAGTaGCTCATGCAACCCAACACATTCAAACAGAGTGATGGTTTTCTT +
Preference number: 1 (lower is better)
Translates to: LSHSYLHFPFFYLAQ*LMQPNTFKQSDGFL
Trigger: AAGAAAACCATCACTCTGTTTGAATGTGTTGGGTTGCATGAGGCACTGTGCCAGGTAGAAGAAGGGGAAATGCAAATATGAGTGGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR GCA 90 bp ATCTTGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTaGTCCAGTGCCCTGTATAAATCTTGCAATGAGTCTCCTAACTTT +
Preference number: 1 (lower is better)
Translates to: ILVEIRCSPSGDRLA*SSALYKSCNESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR CCA 90 bp AAATCTTGGGAGATTCCAGCAGCCTTTGAGGAGTTGGATCTTCAATaGTGGGGAAGACATGTAATAAGACTCAGTCTGCTTTGCTTGGAT +
Preference number: 1 (lower is better)
Translates to: KSWEIPAAFEELDLQ*WGRHVIRLSLLCLD
Trigger: ATCCAAGCAAAGCAGACTGAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATCTCCCAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR TCA 90 bp TTGTATTCTGTGCCGAGGGAGGGTCATTTATGGCTGTGTCATACTTaGCGGGGTGAAAGAAGATCCTCTTTATTGTCCCTTTCATATTCT +
Preference number: 1 (lower is better)
Translates to: LYSVPREGHLWLCHT*RGERRSSLLSLSYS
Trigger: AGAATATGAAAGGGACAATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGACACAGCCATAAATGACCCTCCCTCGGCACAGAATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR TCA 90 bp CATCTCATATTTTTCAGTAAAGCTGGTGCTGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTTAAGATAACACCACTCGGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: HLIFFSKAGAEVSML*GRFFKVKITPLGSS
Trigger: AGAGGACCCGAGTGGTGTTATCTTAACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTCAGCACCAGCTTTACTGAAAAATATGAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR TCA 90 bp GCCCGGCATTATGACAGGTGTTTTTACATATCTTACTTATCTGAGTaGAAGAAGCAGAGTGAGGAAGTGGCAGTAAAGTTAAGTTTCAAC +
Preference number: 1 (lower is better)
Translates to: ARHYDRCFYISYLSE*KKQSEEVAVKLSFN
Trigger: GTTGAAACTTAACTTTACTGCCACTTCCTCACTCTGCTTCTTTCACTCAGATAAGTAAGATATGTAAAAACACCTGTCATAATGCCGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR TCA 90 bp AGACATGCGTTTCAATGTATGAATGAGTGTGTGCTAGAGAGGAAGTaGTTACATCTACTTCAGAAGAAATACTCAGTGGGTCATTTGAGG +
Preference number: 1 (lower is better)
Translates to: RHAFQCMNECVLERK*LHLLQKKYSVGHLR
Trigger: CCTCAAATGACCCACTGAGTATTTCTTCTGAAGTAGATGTAATCACTTCCTCTCTAGCACACACTCATTCATACATTGAAACGCATGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR TCA 90 bp AAGACTAAATCACAAATGGTAGAGAAGACTGGACATAGTCAGATTTaGGAGACATTCATTCTTGTACAGCTGCAGAGTGCTTTAAGGCTT +
Preference number: 1 (lower is better)
Translates to: KTKSQMVEKTGHSQI*ETFILVQLQSALRL
Trigger: AAGCCTTAAAGCACTCTGCAGCTGTACAAGAATGAATGTCTCTCAAATCTGACTATGTCCAGTCTTCTCTACCATTTGTGATTTAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR TCA 90 bp GGAAGTGATTACATCTACTTCAGAAGAAATACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGATATCCAAGAAAAGGTCGAGGTACAT +
Preference number: 1 (lower is better)
Translates to: GSDYIYFRRNTQWVI*GGILTDIQEKVEVH
Trigger: ATGTACCTCGACCTTTTCTTGGATATCTGTCAAAATACCACCTCAAATGACCCACTGAGTATTTCTTCTGAAGTAGATGTAATCACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR TCA 90 bp GTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTTCTTTaGAGGACAATCAAAAATATAAATGACAGTTTAGGTTTACCCACA +
Preference number: 1 (lower is better)
Translates to: VSLALIYCPKEGKVL*RTIKNINDSLGLPT
Trigger: TGTGGGTAAACCTAAACTGTCATTTATATTTTTGATTGTCCTTCAAAGAACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp CCCTTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAG +
Preference number: 2 (lower is better)
Translates to: PFLLLLLLLFLHLWG*HVILWVTGTNWSIQ
Trigger: CTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 2 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGILPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 2 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 2 (lower is better)
Translates to: SQLRGMAHSDPAGGISELVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: AALTGCLANGRHCTAPSYAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 2 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 2 (lower is better)
Translates to: TAACALGRWPRSQRRQNPGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: SQLRGMAHSDPAGGISELRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 2 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCATGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 2 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGIWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CAA 90 bp CAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGAC +
Preference number: 2 (lower is better)
Translates to: QNPPGAESEDSVSLN*SVASQLNPARSGAD
Trigger: GTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CAA 90 bp TCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: SCGSQALTGAFRQQW*NPLSRGRVKLRGLP
Trigger: GGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 2 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 90 bp AAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTG +
Preference number: 2 (lower is better)
Translates to: KTETEKSPWRKVGYV*LPHKDWRNSSREVV
Trigger: CACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 2 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 2 (lower is better)
Translates to: QENTTEVLPHRALSQLRPVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 2 (lower is better)
Translates to: PLFSWCQENTTEVLPHRASGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 2 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 2 (lower is better)
Translates to: VECQQKWIRFGMERFYQLSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 2 (lower is better)
Translates to: DEAILVACKRLMLSLRRTVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 2 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CAA 90 bp CAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: QWLNPLSRGRVKLRG*PPFPFSTCILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 2 (lower is better)
Translates to: LFSWCQENTTEVLPHRALVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 2 (lower is better)
Translates to: VECQQKWIRFGMERFYQLVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 2 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: VECQQKWIRFGMERFYQLECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: KARILLKSGLPLLYPFGRECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: WCQENTTEVLPHRALSQLECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 2 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 2 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAGTGTGCCCGGCATTATaGCAGGTGTTTTTACATATC +
Preference number: 2 (lower is better)
Translates to: VAASNYAEVSPRERDVVAVCPAL*QVFLHI
Trigger: GATATGTAAAAACACCTGTCATAATGCCGGGCACAC...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR GCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 2 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 2 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: SQLRGMAHSDPAGGISELQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 2 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCTTCCACATAAGGACTaGCGCAACTCATCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLLPHKD*RNSSSH
Trigger: GTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAG...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
3UTR-3UTR CCA 90 bp GTGTGTGCTAGAGAGGAAGTGATTACATCTACTTCAGAAGAAATACTCAGTGGGCTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VCAREEVITSTSEEILSGLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...CCCACTGAGTATTTCTTCTGAAGTAGATGTAATCACTTCCTCTCTAGCACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR CAA 90 bp TCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCG +
Preference number: 2 (lower is better)
Translates to: SVFCYKQQGRGHFSC*QEVDVESAPYRLSP
Trigger: CGGAGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp AAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTTA +
Preference number: 2 (lower is better)
Translates to: KTETEKSPWRKVGYV*LPHKDWRNSSSHML
Trigger: TAACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
3UTR-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 2 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 2 (lower is better)
Translates to: QENTTEVLPHRALSQLRPYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR GCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTATATAGCTGTTAGCTaGCTTTCTGGGTGTGTTAAG +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATYIAVS*LSGCVK
Trigger: CTTAACACACCCAGAAAGGCAGCTAACAGCTATATA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 2 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 2 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 2 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CCA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 2 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: LSLLCLKEATKESIKQPEIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAA +
Preference number: 2 (lower is better)
Translates to: NSKDEAILVACKRLM*SLRRTDSLRSKFSK
Trigger: TTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp GTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTC +
Preference number: 2 (lower is better)
Translates to: VINSKDEAILVACKR*MLSLRRTDSLRSKF
Trigger: GAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp TTCTTTTTCCAAAGCCAGCCCTCACAGTCACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTGCTCTTGCCTGCTATAGGACCTTTG +
Preference number: 2 (lower is better)
Translates to: FFFQSQPSQSPRPRS*QEIRLLLLPAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGACTGTGAGGGCTGGCTTTGGAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR TCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 2 (lower is better)
Translates to: QENTTEVLPHRALSQLRPHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 2 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 2 (lower is better)
Translates to: LFSWCQENTTEVLPHRALYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 2 (lower is better)
Translates to: VECQQKWIRFGMERFYQLISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 2 (lower is better)
Translates to: RASLPVNCLLFTGHNLATCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR TCA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 2 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 2 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: QENTTEVLPHRALSQLRPAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 2 (lower is better)
Translates to: VECQQKWIRFGMERFYQLQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 2 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 90 bp GTGGGTATGTATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTTCCTTGTCACTCTCACTCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VGMYHMGVEGYLVLV*MEYLLLPCHSHSSN
Trigger: ATTACTGGAGTGAGAGTGACAAGGAAGAAGCAGATACTCCATCAACACCAAAACAAGATAGCCCTCCACCCCCATATGATACATACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCATCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 2 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR TCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTGCCACTCTTCTCAAGTaGTATTCCCGAGACTGTTTT +
Preference number: 2 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLATLLK*YSRDCF
Trigger: AAAACAGTCTCGGGAATATCACTTGAGAAGAGTGGC...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 2 (lower is better)
Translates to: LLCLKEATKESIKQPEFSVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 2 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 2 (lower is better)
Translates to: CQENTTEVLPHRALSQLRRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAAGGAGGATTCCAATTaGTCCAACTGTTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLKEDSN*SNCCSR
Trigger: CCTGCTACAACAGTTGGACCAATTGGAATCCTCCTT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTCTTCTTCCTATCTaGCAGCCACAGTTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQFLLPI*QPQFLS
Trigger: GCTGAGAAACTGTGGCTGCCAGATAGGAAGAAGAAA...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GTCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTTGCTCTTGCCTGCTATCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 2 (lower is better)
Translates to: VTTAKIFARNSSFALACYRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...ATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LFSWCQENTTEVLPHRALSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 2 (lower is better)
Translates to: FSWCQENTTEVLPHRALSSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 2 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 2 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCACCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 2 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 2 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 2 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 2 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 2 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 90 bp CAGGGCACTACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: QGTTVFTTSSSDGKT*VSLALIYCPKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGTAGTGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp CCCTCACAGTCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGACCTTTGTTTTTCTTCTTTGATTTG +
Preference number: 2 (lower is better)
Translates to: PSQSPRPRSLQEIRL*LLPAIGPLFFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGACTGTGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR TCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGAGTCTATCTTCTTCTTaGCTATCCCAACCTGGTTAT +
Preference number: 2 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQSLSSS*LSQPGY
Trigger: ATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACT...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 2 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR GCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 2 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 2 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATGTACAGCTGCAGAGTaGTTTAAGGCTTCCGGGCTA +
Preference number: 2 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKCTAAE*FKASGL
Trigger: TAGCCCGGAAGCCTTAAAGCACTCTGCAGCTGTACA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR GCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTTCTACCTGGCACAGTaGCTCATGCAACCCAACACA +
Preference number: 2 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHFYLAQ*LMQPNT
Trigger: TGTGTTGGGTTGCATGAGGCACTGTGCCAGGTAGAA...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 2 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp CTAAATTCTCTAAACATTAGCTTATCAATCTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: LNSLNISLSICESNG*SANRSGSDLAWRGS
Trigger: AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGACTCACAGATTGATAAGCTAATGTTTAGAGAATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 90 bp ACAGTTGTTCCTTCTGCAATACAGCTGTGTAATGAGCCCAGAAGGTaGGGAAAGACTAAATCACAAATGGTAGAGAAGACTGGACATAGT +
Preference number: 2 (lower is better)
Translates to: TVVPSAIQLCNEPRR*GKTKSQMVEKTGHS
Trigger: ACTATGTCCAGTCTTCTCTACCATTTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCATTACACAGCTGTATTGCAGAAGGAACAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR TCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTTTCGGAAGGGATCTGTaGTCTTGTAAAATTGGACAA +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGFGRDL*SCKIGQ
Trigger: TTGTCCAATTTTACAAGATCACAGATCCCTTCCGAA...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR TCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTGTTAAAAGTGCATCATaGGGGCAGAGTTGCTGCATC +
Preference number: 2 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIVKSAS*GQSCCI
Trigger: GATGCAGCAACTCTGCCCTCATGATGCACTTTTAAC...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR GCA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGAATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 2 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR GCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATGGTTTTGCCCAAATATaGCTCTACTTGAACACAAAA +
Preference number: 2 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNGFAQI*LYLNTK
Trigger: TTTTGTGTTCAAGTAGAGGCATATTTGGGCAAAACC...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTATGAGCCCAGAAGGTTaGGAAAGACTAAATCACAAA +
Preference number: 2 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSMSPEG*ERLNHK
Trigger: TTTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCAT...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTATGGATAACGAGTTCTaGTACATATTTCGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGMDNEF*YIFRKG
Trigger: TCCCTTCCGAAATATGTACCAGAACTCGTTATCCAT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CCA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 2 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTCAGCCTTTGAGGAGTTaGATCTTCAATGGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIQPLRS*IFNGGE
Trigger: TTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTG...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR CCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTTTGACTATCCCAACCTaGTTATTTTCCATTCCAGTA +
Preference number: 2 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLLTIPT*LFSIPV
Trigger: TACTGGAATGGAAAATAACCAGGTTGGGATAGTCAA...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 2 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCATTGCAAAGTTGTTATTaGGCTCCTAATGTGTGCCCG +
Preference number: 2 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPLQSCY*APNVCP
Trigger: CGGGCACACATTAGGAGCTCAATAACAACTTTGCAA...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR TCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAGGACAGAGTCCAAAATaGGAGACAACAGTGAGAGTA +
Preference number: 2 (lower is better)
Translates to: INLCSPATCVFTGIRCGVGQSPK*ETTVRV
Trigger: TACTCTCACTGTTGTCTCTCATTTTGGACTCTGTCC...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 2 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 2 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGATTGAAGTAAGAACATaGGTCTTAGAGTCAAAGAAC +
Preference number: 2 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQIEVRT*VLESKN
Trigger: GTTCTTTGACTCTAAGACCCATGTTCTTACTTCAAT...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTATTTCTTCTTCCTATCTaGCAGCCACAGTTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: INLCSPATCVFTGIRCGVFLLPI*QPQFLS
Trigger: GCTGAGAAACTGTGGCTGCCAGATAGGAAGAAGAAA...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 2 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAAAAACAGCAAATTGTaGCTTGTACATTATGCAGCC +
Preference number: 2 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFKNSKL*LVHYAA
Trigger: GGCTGCATAATGTACAAGTCACAATTTGCTGTTTTT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 2 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 2 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATATATAGCTGTTAGCTaGCTTTCTGGGTGTGTTAAG +
Preference number: 2 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIYIAVS*LSGCVK
Trigger: CTTAACACACCCAGAAAGGCAGCTAACAGCTATATA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 2 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 2 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 2 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 2 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTGGAAGTCAAAGTGCTaGCTCTCAGGCAGGAATTCA +
Preference number: 2 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKWKSKC*LSGRNS
Trigger: TGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGATGAGCCCAGAAGGTTaGGAAAGACTAAATCACAAA +
Preference number: 2 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALMSPEG*ERLNHK
Trigger: TTTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCAT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 90 bp CGAGTTCTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATaGGACAATGATATCCTTGTGGAAACAGTTGTTCCTTCTGCAATA +
Preference number: 2 (lower is better)
Translates to: RVLVHISEGICDLVK*DNDILVETVVPSAI
Trigger: TATTGCAGAAGGAACAACTGTTTCCACAAGGATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAGAACTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR CAA 90 bp ACAGGATCATTACATCTTTTTATAAATGATAGCTTGTATTCCATCTaGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: TGSLHLFINDSLYSI*VEIRCSPSGDRLAC
Trigger: GCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGATGGAATACAAGCTATCATTTATAAAAAGATGTAATGATCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 2 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRICGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: LKDESTFTELYRQQYKADYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTTCGGAAGGGATCTGTaGTCTTGTAAAATTGGACAA +
Preference number: 2 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHFGRDL*SCKIGQ
Trigger: TTGTCCAATTTTACAAGATCACAGATCCCTTCCGAA...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR TCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCAGTCTATCTTCTTCTTaGCTATCCCAACCTGGTTAT +
Preference number: 2 (lower is better)
Translates to: PHSLSILIMLASPLNNILSLSSS*LSQPGY
Trigger: ATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR TCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAGGAGAAATAGTCCAGTaGGAAGAGATGAGAATGATA +
Preference number: 2 (lower is better)
Translates to: INLCSPATCVFTGIRCGVGEIVQ*EEMRMI
Trigger: TATCATTCTCATCTCTTCTCACTGGACTATTTCTCC...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 2 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRICLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATATATAGCTGTTAGCTaGCTTTCTGGGTGTGTTAAG +
Preference number: 2 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQYIAVS*LSGCVK
Trigger: CTTAACACACCCAGAAAGGCAGCTAACAGCTATATA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 2 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGATTAGCATTGATTTATTaGCCCAAAGAAGGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGLALIY*PKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAA...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 2 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 2 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 2 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR CAA 90 bp GTAGCTTGCCATAAGTTGGGGTGCTTTCTCGTCTTCCTTGACTACTaGATCTTCCTTTTTCATATTCATAGCAATATAAGACAGTATCTT +
Preference number: 2 (lower is better)
Translates to: VACHKLGCFLVFLDY*IFLFHIHSNIRQYL
Trigger: AAGATACTGTCTTATATTGCTATGAATATGAAAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR TCA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTTACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR TCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCGTAAAATACTTAACATaGTGCTTGGCACACTGTAAG +
Preference number: 2 (lower is better)
Translates to: PHSLSILIMLASPLNNILVKYLT*CLAHCK
Trigger: CTTACAGTGTGCCAAGCATCATGTTAAGTATTTTAC...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 2 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CCA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCTTCTTCTCCTACCTTaGCCCCACTTAATCTTTCAT +
Preference number: 2 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTILLLLP*PHLIFH
Trigger: ATGAAAGATTAAGTGGGGCCAAGGTAGGAGAAGAAG...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAGGTATGGAACAATACTaGCAATCTCACTATTCTAGT +
Preference number: 2 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPGMEQY*QSHYSS
Trigger: ACTAGAATAGTGAGATTGCCAGTATTGTTCCATACC...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCGAGTCTAAATTGGTATaGAACAATACTGGCAATCTC +
Preference number: 2 (lower is better)
Translates to: PHSLSILIMLASPLNNILESKLV*NNTGNL
Trigger: GAGATTGCCAGTATTGTTCCATACCAATTTAGACTC...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 2 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 2 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp AATACATTTAGACATGCGTTTCAATGTATGAATGAGTGTGTGCTAGAGAGGAAGTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 2 (lower is better)
Translates to: NTFRHAFQCMNECVLERKCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...CTTCCTCTCTAGCACACACTCATTCATACATTGAAACGCATGTCTAAATGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAAAAACAGCAAATTGTaGCTTGTACATTATGCAGCC +
Preference number: 2 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKKNSKL*LVHYAA
Trigger: GGCTGCATAATGTACAAGTCACAATTTGCTGTTTTT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR TCA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCTCTTACTTATCTGAGTaGAAGAAGCAGAGTGAGGAA +
Preference number: 2 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTISYLSE*KKQSEE
Trigger: TTCCTCACTCTGCTTCTTTCACTCAGATAAGTAAGA...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 2 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 2 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCAACCATCATATATaGCACTCTTCTCAAGTGATA +
Preference number: 2 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIFNHHI*HSSQVI
Trigger: TATCACTTGAGAAGAGTGGCATATATGATGGTTGAA...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR CAA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTaGACTATCCCAACCTGGTTATTTTCCATTCCAGTATCCTTTATA +
Preference number: 2 (lower is better)
Translates to: TNQCRTSYLLQSIFF*TIPTWLFSIPVSFI
Trigger: TATAAAGGATACTGGAATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: LKDESTFTELYRQQYKADAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 2 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR GCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 2 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CCA 72 bp TTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTGTGGGTCACAGGCACT +
Preference number: 3 (lower is better)
Translates to: FLLLLLLLFLHL*GLHVILWVTGT
Trigger: AGTGCCTGTGACCCACAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR GCA 72 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTaGACTGCTCCCAGTTACTTCCTGGCGAAACTCCTC +
Preference number: 3 (lower is better)
Translates to: AALTGCLANGRH*TAPSYFLAKLL
Trigger: GAGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTTGCACGTCATCCTGGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 3 (lower is better)
Translates to: LLLLLLLFLHLWGLHVILVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR TCA 72 bp CCTGGAGGGCAGAACTGTCTCTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGGCAACGCTGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: PGGQNCLFWWVY*WCWKAWQRCLW
Trigger: CCACAAGCAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTCTGCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CCA 72 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAGACACTGCACTGCTCC +
Preference number: 3 (lower is better)
Translates to: ASQLNPARSGAD*LSCEWETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CCA 72 bp TTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATC +
Preference number: 3 (lower is better)
Translates to: FLSWQGRLPPVL*GDGRGVREDRI
Trigger: GATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR TCA 72 bp AGTGGCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATGGGAGACACTGCACTG +
Preference number: 3 (lower is better)
Translates to: SGVSIKSCQERR*LAVLRMGDTAL
Trigger: CAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 3 (lower is better)
Translates to: LALASSHSQLRGMAHSDPLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...AGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GAACTGTCTCTTTTGGTGGGTGTACTGATGGTGCTGGAAGGCGTGGCAACGCTGCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: ELSLLVGVLMVLEGVATLPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...CAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTTGCACGTCATCCTGCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: LLLLLLLFLHLWGLHVILQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 3 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR GCA 72 bp CTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTaGTTCCACATAAGGACTGGCGCAACTCATCGAGGG +
Preference number: 3 (lower is better)
Translates to: LRSLRGGKSAMF*FHIRTGATHRG
Trigger: CCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTATGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: WCQENTTEVLPHRALSQLCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: QENTTEVLPHRALSQLRPPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACCACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 3 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 3 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTTGCACGTCATCCTGTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: LLLLLLLFLHLWGLHVILYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAGCAGCCTTTGAGGAGTaGGATCTTCAATGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: VAASNYAEVSPRERDVVAAAFEE*DLQWWG
Trigger: TCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: WCQENTTEVLPHRALSQLPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: VECQQKWIRFGMERFYQLPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: LFSWCQENTTEVLPHRALPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR GCA 72 bp CAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTGGGAGGCCCCCAATCC +
Preference number: 3 (lower is better)
Translates to: QCRKLAFFLRVA*PSYIPLGGPQS
Trigger: GGATTGGGGGCCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR GCA 72 bp CTGCTTAGTAGCAACAGAGCTAGTCTTCCCGTCAACTaGTTGCTGTTTACAGGCCACAACCTGGCCACTGTA +
Preference number: 3 (lower is better)
Translates to: LLSSNRASLPVN*LLFTGHNLATV
Trigger: TACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCTGTTGCTACTAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR GCA 72 bp CTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTaGTTCCACATAAGGACTGGCGCAACTCATCTTCCC +
Preference number: 3 (lower is better)
Translates to: LRSLRGGKSAMF*FHIRTGATHLP
Trigger: GGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
3UTR GCA 72 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCTAAGGGGTATGGCCCA +
Preference number: 3 (lower is better)
Translates to: KLRGLPPFPFST*ILSLSAKGYGP
Trigger: TGGGCCATACCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 3 (lower is better)
Translates to: LFSWCQENTTEVLPHRALRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 3 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 3 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 3 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 3 (lower is better)
Translates to: ALTGAFRQQWLNPLSRGRVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...TCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR GCA 72 bp AAGGTTTCCTTTTTCATCCCTGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTAGAGATCCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: KVSFFIPGNIWF*RRRGNVEILEG
Trigger: GCCCTCCAGGATCTCTACATTCCCCCTCCTCCTGCAGAACCATATATTCCCAGGGATGAAAAAGGAAACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CCA 72 bp GGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTT +
Preference number: 3 (lower is better)
Translates to: GSQALTGAFRQQ*LNPLSRGRVKL
Trigger: AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CCA 72 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCTCGCAGTGTATTAGCT +
Preference number: 3 (lower is better)
Translates to: GLSANRSGSDLA*RGSTNSRSVLA
Trigger: AGCTAATACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CCA 72 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCTCGCAGTGTATTAGCA +
Preference number: 3 (lower is better)
Translates to: GLSANRSGSDLA*RGSTNSRSVLA
Trigger: TGCTAATACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644095.1
3UTR-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 3 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: SQLRGMAHSDPAGGISELGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 3 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 3 (lower is better)
Translates to: QENTTEVLPHRALSQLRPSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 3 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR TCA 72 bp GTGCCGAGGGAGGGTCATTTATGGCTGTGTCATACTTaGCGGGGTGAAAGAAGATCCTCTTTATTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: VPREGHLWLCHT*RGERRSSLLSL
Trigger: AAGGGACAATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGACACAGCCATAAATGACCCTCCCTCGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR TCA 72 bp ATCCCTTATGCACTGGCTTGCCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGTTTCCTTTTTCATCCC +
Preference number: 3 (lower is better)
Translates to: IPYALACPPYVL*GLHKEGFLFHP
Trigger: GGGATGAAAAAGGAAACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 3 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: VECQQKWIRFGMERFYQLGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTGGAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 3 (lower is better)
Translates to: AMFCFHIRTGATHRGRSWKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...CCACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 3 (lower is better)
Translates to: PLFSWCQENTTEVLPHRASLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACAGCTTGTATTCCATCTaGGTTGAAATACGATGTTCT +
Preference number: 3 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNSLYSI*VEIRCS
Trigger: AGAACATCGTATTTCAACCAAGATGGAATACAAGCT...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 3 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: CQENTTEVLPHRALSQLRGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 3 (lower is better)
Translates to: QENTTEVLPHRALSQLRPLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 3 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CAA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 3 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 3 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR GCA 72 bp GAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTaGTCCAGTGCCCTGTATAAATCTTGCAATGAGTCT +
Preference number: 3 (lower is better)
Translates to: EIRCSPSGDRLA*SSALYKSCNES
Trigger: AGACTCATTGCAAGATTTATACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR CCA 72 bp ACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAG +
Preference number: 3 (lower is better)
Translates to: TPHEKTETEKSP*RKVGYVLLPHK
Trigger: CTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 3 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVERSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: IHNLLSLLCLKEATKESICKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 3 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TCTTGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTGCTCCAGTGAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: SWLKYDVLLVVTDWPAPVNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...CACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTCTTCTTCTCCTACCTaGGCCCCACTTAATCTTTCA +
Preference number: 3 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQSSSPT*APLNLS
Trigger: TGAAAGATTAAGTGGGGCCAAGGTAGGAGAAGAAGA...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAGATTCCAGCAGCCTTaGAGGAGTTGGATCTTCAAT +
Preference number: 3 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLRFQQP*RSWIFN
Trigger: ATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATCT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR TCA 72 bp ATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGTTaGTGGAGTATCTGCTTCTTCCTTGTCACTCTCACT +
Preference number: 3 (lower is better)
Translates to: IIWGWRAILFWC*WSICFFLVTLT
Trigger: AGTGAGAGTGACAAGGAAGAAGCAGATACTCCATCAACACCAAAACAAGATAGCCCTCCACCCCCATATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
3UTR GCA 72 bp TTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTAC +
Preference number: 3 (lower is better)
Translates to: FCYKQQGRGHFS*LQEVDVESAPY
Trigger: GTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CCA 72 bp GAGATTCCAGCAGCCTTTGAGGAGTTGGATCTTCAATaGTGGGGAAGACATGTAATAAGACTCAGTCTGCTT +
Preference number: 3 (lower is better)
Translates to: EIPAAFEELDLQ*WGRHVIRLSLL
Trigger: AAGCAGACTGAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 3 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 3 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 3 (lower is better)
Translates to: IHNLLSLLCLKEATKESIPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 3 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 3 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCGCAGCCTTTGAGGAGTaGGATCTTCAATGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: PHSLSILIMLASPLNNILAAFEE*DLQWWG
Trigger: TCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR GCA 72 bp CTGTTCTCCCACAGAAACCGCAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTTGATCTTATGCTAGTC +
Preference number: 3 (lower is better)
Translates to: LFSHRNRSFLLL*SILIGFDLMLV
Trigger: GACTAGCATAAGATCAAAGCCAATCAAGATGGAGCACAGTAACAGAAAACTGCGGTTTCTGTGGGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 3 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 3 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 3 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR TCA 72 bp GGAGGGTCATTTATGGCTGTGTCATACTTGACGGGGTaGAAGAAGATCCTCTTTATTGTCCCTTTCATATTC +
Preference number: 3 (lower is better)
Translates to: GGSFMAVSYLTG*KKILFIVPFIF
Trigger: GAATATGAAAGGGACAATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGACACAGCCATAAATGACCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 3 (lower is better)
Translates to: LSLLCLKEATKESIKQPELLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR TCA 72 bp CAGTTTTCTGTTACTGTGCTCCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAATGTAGAAAGCTCGCAT +
Preference number: 3 (lower is better)
Translates to: QFSVTVLHLDWL*SYASPNVESSH
Trigger: ATGCGAGCTTTCTACATTGGGACTAGCATAAGATCAAAGCCAATCAAGATGGAGCACAGTAACAGAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR TCA 72 bp TCACAAATGGTAGAGAAGACTGGACATAGTCAGATTTaGGAGACATTCATTCTTGTACAGCTGCAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: SQMVEKTGHSQI*ETFILVQLQSA
Trigger: AGCACTCTGCAGCTGTACAAGAATGAATGTCTCTCAAATCTGACTATGTCCAGTCTTCTCTACCATTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR TCA 72 bp TTTTTCAGTAAAGCTGGTGCTGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTTAAGATAACACCACTC +
Preference number: 3 (lower is better)
Translates to: FFSKAGAEVSML*GRFFKVKITPL
Trigger: GAGTGGTGTTATCTTAACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTCAGCACCAGCTTTACTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR GCA 72 bp GATTTGAGAGACATTCATTCTTGTACAGCTGCAGAGTaGTTTAAGGCTTCCGGGCTAATGATATCAAGTATG +
Preference number: 3 (lower is better)
Translates to: DLRDIHSCTAAE*FKASGLMISSM
Trigger: CATACTTGATATCATTAGCCCGGAAGCCTTAAAGCACTCTGCAGCTGTACAAGAATGAATGTCTCTCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCATTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 3 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 3 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LKDESTFTELYRQQYKADMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGAATGAGCCCAGAAGGTaGGGAAAGACTAAATCACAA +
Preference number: 3 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALNEPRR*GKTKSQ
Trigger: TTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCATT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGAAATGAGCCCAGAAGGTaGGGAAAGACTAAATCACAA +
Preference number: 3 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGNEPRR*GKTKSQ
Trigger: TTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCATT...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRINYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 3 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGATTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 3 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 3 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR GCA 72 bp AGAAAAAGAGGGCAGAGTAGGCTACATTTAGTGAAATaGATTGGTTTTGCCCAAATATGCCTCTACTTGAAC +
Preference number: 3 (lower is better)
Translates to: RKRGQSRLHLVK*IGFAQICLYLN
Trigger: GTTCAAGTAGAGGCATATTTGGGCAAAACCAATGCATTTCACTAAATGTAGCCTACTCTGCCCTCTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR CCA 72 bp AGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTaGCGCAACTCATCTTCCCACATGTTAATAATAATA +
Preference number: 3 (lower is better)
Translates to: RKVGYVLLPHKD*RNSSSHMLIII
Trigger: TATTATTATTAACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
3UTR CCA 72 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATaGTCTGAAGGCAGAATACATTTAGACATGCGTTTC +
Preference number: 3 (lower is better)
Translates to: LIYLFRVPAGTR*SEGRIHLDMRF
Trigger: GAAACGCATGTCTAAATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 3 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 3 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 3 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR-3UTR CAA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAATGTTGGCTTCTCCTTaGAACAATATTCTCCTGTTG +
Preference number: 3 (lower is better)
Translates to: INLCSPATCVFTGIRCGVMLASP*NNILLL
Trigger: CAACAGGAGAATATTGTTCAAAGGAGAAGCCAACAT...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR TCA 72 bp GTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTaGCTATCCCAACCTGGTTATTTTCCATTCCAGTAT +
Preference number: 3 (lower is better)
Translates to: VEHPICCSLSSS*LSQPGYFPFQY
Trigger: ATACTGGAATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LKDESTFTELYRQQYKADWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAATTATAAAACTGGGTTaGGGGAAGGCAGTTTGTTAT +
Preference number: 3 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKIIKLG*GKAVCY
Trigger: ATAACAAACTGCCTTCCCCAAACCCAGTTTTATAAT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR-3UTR CAA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAGACAATATCATGGTATaGATTCCACTCAATGACTCA +
Preference number: 3 (lower is better)
Translates to: INLCSPATCVFTGIRCGVDNIMV*IPLNDS
Trigger: TGAGTCATTGAGTGGAATCAATACCATGATATTGTC...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR TCA 72 bp TACATCTACTTCAGAAGAAATACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGATATCCAAGAAAAGGTC +
Preference number: 3 (lower is better)
Translates to: YIYFRRNTQWVI*GGILTDIQEKV
Trigger: GACCTTTTCTTGGATATCTGTCAAAATACCACCTCAAATGACCCACTGAGTATTTCTTCTGAAGTAGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 3 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR-3UTR CAA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCTACATATACCTTATTaGCAGGATTATTGCATGGAC +
Preference number: 3 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTILHIPY*QDYCMD
Trigger: GTCCATGCAATAATCCTGCAAATAAGGTATATGTAG...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVLWGDGRGVREDRILQGSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: CRLCSGEMAAESEKTESSVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LRGMAHSDPAGGISELAGWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...CCCTGCCAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp CTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LRGMAHSDPAGGISELAGGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...CCCTGCCAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: CRLCSGEMAAESEKTESSDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
3UTR CAA 72 bp CTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: LLLLLLFLHLWG*HVILWVTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSRPQPT*PLASRA
Trigger: CGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: TAACALGRWPRSQRRQNPLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: PVLWGDGRGVREDRILQGLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp GCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: AMVEPAISRQSKTSRLAPCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000645074.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: PVLWGDGRGVREDRILQGHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRALPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCATTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: MVEPAISRQSKTSRLAPILPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...AATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: CRLCSGEMAAESEKTESSLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCATCCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: CRLCSGEMAAESEKTESSIRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGGAT...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGICQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: AALTGCLANGRHCTAPSYSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGCACTGCTCCCAGTTACTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LHCSQLLPGETPHEKTETEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...AGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp CAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: QNPPGAESEDSVSLNLSVAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LPGETPHEKTETEKSPWRTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...CCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFNVQES*LRAGSA
Trigger: AGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000645074.1
CDS-3UTR CCA 90 bp GCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ATCVFTGIRCGVHQKHCLWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...GAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TAACALGRWPRSQRRQNPPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRACQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: GADWLSCEWETLHCSQLLCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTGGTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: ILQVAFLSWQGRLPPVLWSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...CCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLRPQPT*PLASRA
Trigger: CGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR GCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR GCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000645074.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLATGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVATGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AMVEPAISRQSKTSRLAPSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...GGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCNVQES*LRAGSA
Trigger: AGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTT...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000645074.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGATGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SAMFCFHIRTGATHLPTCLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...ACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp ATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTGGTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: ILQVAFLSWQGRLPPVLWLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...CCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACATAGCTTGAGTTGCTaGGGGGTCGCGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLHSLSC*GVASPR
Trigger: CCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGGCTGCCCGGCGGAAATaGCGAGGGGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLAARRK*RGASCH
Trigger: GTGGCAGGAGGCCCCTCGTCATTTCCGCCGGGCAGC...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643841.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGISTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCCGAGCACGACTAGCTaGCCGGCGGAAATGACGAGG +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSPSTTS*PAEMTR
Trigger: CCTCGTCATTTCCGCCGGGCAGCTAGTCGTGCTCGG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642359.1
CDS-3UTR CCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GADWLSCEWETLHCSQLLIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: AALTGCLANGRHCTAPSYWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCATAGCTTGAGTTGCTaGGGGGTCGCGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKHSLSC*GVASPR
Trigger: CCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGIAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRADGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LPGETPHEKTETEKSPWRFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...CCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGATGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: DSVSLNLSVASQLNPARSLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGIADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SQLRGMAHSDPAGGISELSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATGGAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: ASQLNPARSGADWLSCEWRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...CCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TAACALGRWPRSQRRQNPDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTAGTGGTGACAGACTGGCCTGCTCCAGTGCCCTGTATAAATCTTGCAATGAGTAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LVVTDWPAPVPCINLAMSRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...ACTCATTGCAAGATTTATACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CCA 90 bp AGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: RQQWLNPLSRGRVKLRGLRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCACTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRALFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAACTGTCTCTTTTGGTGGGTGTACTGATGGTGCTGGAAGGCGTGGCAACGCTGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELSLLVGVLMVLEGVATLRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRACRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000645074.1
CDS-3UTR GCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp ACTGTACAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TVQTTIQATARKRGQSRLTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTGTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: PWRKVGYVLLPHKDWRNSADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: CRLCSGEMAAESEKTESSVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGNVQES*LRAGSA
Trigger: AGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642359.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PVLWGDGRGVREDRILQGGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000643156.1
3UTR CAA 72 bp AGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: SKDEAILVACKR*MLSLRRTDSLR
Trigger: TCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLLMRRLRLRSLRGGKSAAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...AGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATGGAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: ASQLNPARSGADWLSCEWNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...CCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KLLMRRLRLRSLRGGKSAHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...AGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRALTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVALTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCATTCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: MVEPAISRQSKTSRLAPILTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...AATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: KSPWRKVGYVLLPHKDWRAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCATCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLASDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTGGAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILQVAFLSWQGRLPPVLWNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...CCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRPQPT*PLASRA
Trigger: CGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRISGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645791.1
CDS-3UTR GCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp ATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTGGCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: ILQVAFLSWQGRLPPVLWQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...CCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GADWLSCEWETLHCSQLLQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTTCCCGTCAACTGCTTaGTGTTTACAGGCCACAACC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATFPSTA*CLQATT
Trigger: GGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAGTCTTCCCGTCAACTaGTTGCTGTTTACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATSLPVN*LLFTGH
Trigger: GTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGCCGAGCACGACTAGCTaGCCGGCGGAAATGACGAGG +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLPSTTS*PAEMTR
Trigger: CCTCGTCATTTCCGCCGGGCAGCTAGTCGTGCTCGG...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643841.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LALASSHSQLRGMAHSDPWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...AGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KLLMRRLRLRSLRGGKSAVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...AGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCATAGCTTGAGTTGCTaGGGGGTCGCGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSHSLSC*GVASPR
Trigger: CCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: KLLMRRLRLRSLRGGKSALTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...AGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADRPQPT*PLASRA
Trigger: CGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR GCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVISGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVETGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GADWLSCEWETLHCSQLLQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: PVLWGDGRGVREDRILQGSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GADWLSCEWETLHCSQLLNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACAGCTGCAGAGTaGTTTAAGGCTTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQCTAAE*FKASGL
Trigger: TAGCCCGGAAGCCTTAAAGCACTCTGCAGCTGTACA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGGCCGCAGCCTCCCTaGGCGGGCGGCGCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDWPQPP*AGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDGGVPC*PQPPWA
Trigger: CGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: SAMFCFHIRTGATHLPTCPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...ACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTAGACTGCCGCCTGTGCTCTGGTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILQVAFLSWQGRLPPVLWFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...CCAGAGCACAGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCATTAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: MVEPAISRQSKTSRLAPIRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...AATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLARSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPGETPHEKTETEKSPWRMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...CCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 72 bp CCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGAESEDSVSLN*SVASQLNPARS
Trigger: GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CAA 72 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGGCGCAACTCATCGAGG +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYV*LPHKDWRNSSR
Trigger: CCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACATAGCTTGAGTTGCTaGGGGGTCGCGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIHSLSC*GVASPR
Trigger: CCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: LALASSHSQLRGMAHSDPIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...AGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RKVGYVLLPHKDWRNSSSAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYICRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSVSLNLSVASQLNPARSSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGGCTGCCCGGCGGAAATaGCGAGGGGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKAARRK*RGASCH
Trigger: GTGGCAGGAGGCCCCTCGTCATTTCCGCCGGGCAGC...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642359.1
CDS-3UTR TCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACTCATTCATTTCTGCTaGAGTCCAGGGAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVALIHFC*SPGKEV
Trigger: TACCTCCTTCCCTGGACTTCAGCAGAAATGAATGAG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCG +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEARPQPT*PLASRA
Trigger: CGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000645245.1
CDS-3UTR GCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642359.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKAPRRV*SVPAKA
Trigger: CGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642359.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRITGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVADSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: KSPWRKVGYVLLPHKDWRKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLADSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPESTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: QNPPGAESEDSVSLNLSVRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGCACTGCTCCCAGTTACTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LHCSQLLPGETPHEKTETCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...AGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTTCTACCTGGCACAGTaGCTCATGCAACCCAACACA +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTFYLAQ*LMQPNT
Trigger: TGTGTTGGGTTGCATGAGGCACTGTGCCAGGTAGAA...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLNVQES*LRAGSA
Trigger: AGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGATTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATGGGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: ASQLNPARSGADWLSCEWVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...CCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACAGCCTTTGAGGAGTTaGATCTTCAATGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAQPLRS*IFNGGE
Trigger: TTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
3UTR CAA 72 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSD*AWRGSTNSRSV
Trigger: TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 72 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAA +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLM*SLRRTDSLRSK
Trigger: TTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 72 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGGCGCAACTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYV*LPHKDWRNSSS
Trigger: GGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp GCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: ATCVFTGIRCGVHQKHCLLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...GAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVANQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAACACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642359.1
ENST00000643313.1
ENST00000645074.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCATGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLACSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPECRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATTQWVI*GGILTD
Trigger: ATCTGTCAAAATACCACCTCAAATGACCCACTGAGT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp TCCTCTCACTCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: SSHSQLRGMAHSDPAGGITQWVI*GGILTD
Trigger: ATCTGTCAAAATACCACCTCAAATGACCCACTGAGT...AATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGAGTGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTGGCTGTGTCATACTTaGCGGGGTGAAAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFWLCHT*RGERRS
Trigger: GGATCTTCTTTCACCCCGTCAAGTATGACACAGCCA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTGCAGTGAGGACTGCTaGAATGTCTGCAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLCSEDC*NVCRAR
Trigger: CCTTGCTCTGCAGACATTTCAGCAGTCCTCACTGCA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645074.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTCAGGTGGGGTCCCTTaGTGGCCGCAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDSGGVP*WPQPPW
Trigger: CCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: EKSPWRKVGYVLLPHKDWDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPGETPHEKTETEKSPWRNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...CCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVESTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCATTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SQLRGMAHSDPAGGISELIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATGCCACCCCACCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQCHPTC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGTGGGGTGGCA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643313.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTACCAAATTTTTCAACTaGCACCCCACCTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSTKFFN*HPTCCT
Trigger: TGTGCAACAGGTGGGGTGGCAGTTGAAAAATTTGGT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643313.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRNVQES*LRAGSA
Trigger: AGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: SQLRGMAHSDPAGGISELTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: SAMFCFHIRTGATHLPTCRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...ACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425654.7
CDS-3UTR CCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRACIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQLRGMAHSDPAGGISELCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCTTGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTGCTCCAGTGTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: SWLKYDVLLVVTDWPAPVWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...CACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTGCCGCCTGTGCTCTaGGGAGATGGCCGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLPPVL*GDGRGV
Trigger: GACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: EKSPWRKVGYVLLPHKDWGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATGGAAGTCAAAGTGCTaGCTCTCAGGCAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQWKSKC*LSGRNS
Trigger: TGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGGAAGTCAAAGTGCTaGCTCTCAGGCAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLWKSKC*LSGRNS
Trigger: TGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCATTTCTTCTTCCTATCTaGCAGCCACAGTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAFLLPI*QPQFLS
Trigger: GCTGAGAAACTGTGGCTGCCAGATAGGAAGAAGAAA...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCTTCCACATAAGGACTaGCGCAACTCATCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFLPHKD*RNSSSH
Trigger: GTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAG...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
3UTR CAA 72 bp TCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGA +
Preference number: 4 (lower is better)
Translates to: SQALTGAFRQQW*NPLSRGRVKLR
Trigger: TCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
3UTR CAA 72 bp CAAAGCCAGCCCTCACAGTCACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTGCTCTTGCCTGCTATA +
Preference number: 4 (lower is better)
Translates to: QSQPSQSPRPRS*QEIRLLLLPAI
Trigger: TATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGACTGTGAGGGCTGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVESKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642359.1
ENST00000643313.1
ENST00000645074.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTTGCTCTTGCCTGCTATCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: VTTAKIFARNSSFALACYPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...ATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGGGAAAATGGCTGATTTaGGATCTGTTGCACAATTGT +
Preference number: 4 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGGKWLI*DLLHNC
Trigger: ACAATTGTGCAACAGATCTCAAATCAGCCATTTTCC...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGATACATGACAGTGGTTaGATTTTCAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKIHDSG*IFRALQ
Trigger: CTGTAGTGCCCTGAAAATTCAACCACTGTCATGTAT...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGCTTTTGATTTTAGGATaGCAGGCTTTGAATGCACTC +
Preference number: 4 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWLLILG*QALNAL
Trigger: GAGTGCATTCAAAGCCTGTCATCCTAAAATCAAAAG...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDEGSSL*RTPSAN
Trigger: GTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRTGSVP*RAQSSD
Trigger: GTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATGGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: ASQLNPARSGADWLSCEWFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...CCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGGGAGGTCGTGGGTATGTATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: REVVGMYHMGVEGYLVLVNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...CACCAAAACAAGATAGCCCTCCACCCCCATATGATACATACCCACGACCTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGTAGACTGCCGCCTGTaGTCTGGGGAGATGGCCGCG +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAVDCRL*SGEMAA
Trigger: CGCGGCCATCTCCCCAGAGCACAGGCGGCAGTCTAC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: ALTGAFRQQWLNPLSRGRRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...TCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTGTCCCACTCATATTTaGATTTCCCCTTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPCPTHI*ISPSST
Trigger: GGTAGAAGAAGGGGAAATGCAAATATGAGTGGGACA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDRAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCGAGCTGCTCTCAGGTaGGGTCCCTTGCTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEARAALR*GPLLAA
Trigger: TGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAATGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLARVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: DSVSLNLSVASQLNPARSTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: EKSPWRKVGYVLLPHKDWPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCATAGCTTGAGTTGCTaGGGGGTCGCGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDHSLSC*GVASPR
Trigger: CCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCACTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TCTCAGCTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQLRGMAHSDPAGGISELLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCATGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGCCAGGAGCGGCGCTaGCTGGCTGTCTTGCGAATG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDCQERR*LAVLRM
Trigger: CATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRICRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVESDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCATACATGACAGTGGTTaGATTTTCAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSIHDSG*IFRALQ
Trigger: CTGTAGTGCCCTGAAAATTCAACCACTGTCATGTAT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCGATTCCAGCAGCCTTTaGGGAGTTGGATCTTCAATG +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLDSSSL*GVGSSM
Trigger: CATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATC...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGGTTAAAAGTGCATCATaGGGGCAGAGTTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQVKSAS*GQSCCI
Trigger: GATGCAGCAACTCTGCCCTCATGATGCACTTTTAAC...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAGGAGAAATAGTCCAGTaGGAAGAGATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAGEIVQ*EEMRMI
Trigger: TATCATTCTCATCTCTTCTCACTGGACTATTTCTCC...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAAAGAACAGTTTGAGTaGCTCCACCAACATTTGCTA +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAKEQFE*LHQHLL
Trigger: TAGCAAATGTTGGTGGAGTCACTCAAACTGTTCTTT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAACCAATTGGGCTCTTaGAGAATGAAGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLNQLGS*RMKPMM
Trigger: CATCATTGGCTTCATTCTTCAAGAGCCCAATTGGTT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTCATACTTGACGGGGTaGAAGAAGATCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSSYLTG*KKILFI
Trigger: AATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTCATACTTGACGGGGTaGAAGAAGATCCTCTTTATT +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSSYLTG*KKILFI
Trigger: AATAAAGAGGATCTTCTTTCACCCCGTCAAGTATGA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTTGGCTGACCAGGTGTaGAAGGTATTGTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSLADQV*KVLYFG
Trigger: TCCAAAATACAATACCTTTCACACCTGGTCAGCCAA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642501.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCTCAGCAGCCCGAGCTaGTCTCAGGTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEALSSPS*SQVGSL
Trigger: AAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTGAG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTTGGCAGGGTAGACTaGCGCCTGTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVGRVD*RLCSGE
Trigger: CTCCCCAGAGCACAGGCGGCAGTCTACCCTGCCAAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QNPPGAESEDSVSLNLSVFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGTTAGCATTGATTTATTaGCCCAAAGAAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGLALIY*PKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAA...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: RASLPVNCLLFTGHNLATVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DEAILVACKRLMLSLRRTFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGATTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALTGAFRQQWLNPLSRGRFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...TCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DSVSLNLSVASQLNPARSCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGGAGCGGCGCTGACTaGCTGTCTTGCGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRSGAD*LSCEWE
Trigger: CTCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVELHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCACAGTCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTTGCTCTTGCCTTGGAAGTCAAAGTGCTaGCTCTCAGGCAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SQSPRPRSLQEIRLLLLPWKSKC*LSGRNS
Trigger: TGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCA...AGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CCA 90 bp ACTGTACAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTACAGCCTTTGAGGAGTTaGATCTTCAATGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TVQTTIQATARKRGQSRLQPLRS*IFNGGE
Trigger: TTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTG...TAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTGTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGATGAGCCCAGAAGGTTaGGAAAGACTAAATCACAAA +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVMSPEG*ERLNHK
Trigger: TTTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCAT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVERSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGATGGCCAATGCGGCTaGCCCCCAGATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRDGQCG*PPDLLA
Trigger: AGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESISKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTACCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SAGSQAGIHKGDSLKPKLPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...TAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYICSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGATCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVESGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: ESEDSVSLNLSVASQLNPSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...AGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGCCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 4 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp ACTGTACAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTAGGACAGAGTCCAAAATaGGAGACAACAGTGAGAGTA +
Preference number: 4 (lower is better)
Translates to: TVQTTIQATARKRGQSRLGQSPK*ETTVRV
Trigger: TACTCTCACTGTTGTCTCTCATTTTGGACTCTGTCC...TAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTGTACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR TCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTTCGGAAGGGATCTGTaGTCTTGTAAAATTGGACAA +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSFGRDL*SCKIGQ
Trigger: TTGTCCAATTTTACAAGATCACAGATCCCTTCCGAA...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTTCGGAAGGGATCTGTaGTCTTGTAAAATTGGACAA +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSFGRDL*SCKIGQ
Trigger: TTGTCCAATTTTACAAGATCACAGATCCCTTCCGAA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTAACCAATTGGGCTCTTaGAGAATGAAGCCAATGATG +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSNQLGS*RMKPMM
Trigger: CATCATTGGCTTCATTCTTCAAGAGCCCAATTGGTT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATGTGTGCCCGGCATTATaGCAGGTGTTTTTACATATC +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNVCPAL*QVFLHI
Trigger: GATATGTAAAAACACCTGTCATAATGCCGGGCACAC...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGTCTTCCCGTCAACTaGTTGCTGTTTACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSLPVN*LLFTGH
Trigger: GTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGCTGCATCAAACTATaGCGAGGTATCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLCCIKL*RGISQR
Trigger: TCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCA...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATGTACACCAGAAACACTaGCTCTTGTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNVHQKH*LLWSQF
Trigger: AAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTAC...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTGTACAGCTGCAGAGTaGTTTAAGGCTTCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVECTAAE*FKASGL
Trigger: TAGCCCGGAAGCCTTAAAGCACTCTGCAGCTGTACA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTTTCTACCTGGCACAGTaGCTCATGCAACCCAACACA +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSFYLAQ*LMQPNT
Trigger: TGTGTTGGGTTGCATGAGGCACTGTGCCAGGTAGAA...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp GCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: ATCVFTGIRCGVHQKHCLDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...GAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTTGGTGCTGGAAGGCGTaGCAACGCTGCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFWCWKA*QRCLWD
Trigger: GTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCA...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTATTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATTGGACAATGATATCCTCTTCCTCCACCTCTaGGGGTTGCACGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LVHISEGICDLVKLDNDILFLHL*GLHVIL
Trigger: CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAG...GATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAACCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTTGGAAGTCAAAGTGCTaGCTCTCAGGCAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLWKSKC*LSGRNS
Trigger: TGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCA...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCATGAGCCCAGAAGGTTaGGAAAGACTAAATCACAAA +
Preference number: 4 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTMSPEG*ERLNHK
Trigger: TTTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCAT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR CAA 72 bp AATGAATTTGGTGATTCAGATCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTGAGGTCTTCACAAGGA +
Preference number: 4 (lower is better)
Translates to: NEFGDSDPLCTG*PTICPLRSSQG
Trigger: TCCTTGTGAAGACCTCAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATCACCAAATTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 72 bp TATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTTCCTTGTCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: YHMGVEGYLVLV*MEYLLLPCHSH
Trigger: GTGAGAGTGACAAGGAAGAAGCAGATACTCCATCAACACCAAAACAAGATAGCCCTCCACCCCCATATGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR TCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: INLCSPATCVFTGIRCGVLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGCAGCTGGTCCCCACTaGTCTTCTCCCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRAAGPH*SSPSQS
Trigger: ACTTTGAGAGGGAGAAGATCAGTGGGGACCAGCTGC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTGACGACAGGGATATaGTGTGGTCACAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLTTGI*CGHRLQ
Trigger: CTGGAGTCTGTGACCACATCATATCCCTGTCGTCAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATTGGACAATGATATCTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LVHISEGICDLVKLDNDIFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...GATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGAAAAACAGCAAATTGTaGCTTGTACATTATGCAGCC +
Preference number: 4 (lower is better)
Translates to: EKSPWRKVGYVLLPHKDWKNSKL*LVHYAA
Trigger: GGCTGCATAATGTACAAGTCACAATTTGCTGTTTTT...CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTGATAATGTGCTTCACTaGAATCAAGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALDNVLH*NQVLVS
Trigger: AGACACAAGTACTTGATTTCAGTGAAGCACATTATC...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGATAATGTGCTTCACTaGAATCAAGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCDNVLH*NQVLVS
Trigger: AGACACAAGTACTTGATTTCAGTGAAGCACATTATC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCAGGGAAAAGGAGAGATaGATATTAAGGGGATACCAC +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLREKER*ILRGYH
Trigger: GTGGTATCCCCTTAATATTCATCTCTCCTTTTCCCT...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAAAGAACAGTTTGAGTaGCTCCACCAACATTTGCTA +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSKEQFE*LHQHLL
Trigger: TAGCAAATGTTGGTGGAGTCACTCAAACTGTTCTTT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCTTAAAAGAACAGTTTaGGTGACTCCACCAACATTT +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRLKRTV*VTPPTF
Trigger: AAATGTTGGTGGAGTCACTCAAACTGTTCTTTTAAG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCTTAAAAGAACAGTTTaGGTGACTCCACCAACATTT +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALLKRTV*VTPPTF
Trigger: AAATGTTGGTGGAGTCACTCAAACTGTTCTTTTAAG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGGACATAGTCAGATTTaGGAGACATTCATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCGHSQI*ETFILV
Trigger: TACAAGAATGAATGTCTCTCAAATCTGACTATGTCC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTGGCTGTGTCATACTTaGCGGGGTGAAAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPWLCHT*RGERRS
Trigger: GGATCTTCTTTCACCCCGTCAAGTATGACACAGCCA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCATTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: VAASNYAEVSPRERDVVAFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: KARILLKSGLPLLYPFGRTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: WCQENTTEVLPHRALSQLEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCATTTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: MVEPAISRQSKTSRLAPISFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...AATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: VQWVECQQKWIRFGMERFSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYINPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTCCACCTCTGGGGGTTaGACGTCATCCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDSTSGG*TSSCGS
Trigger: TGACCCACAGGATGACGTGCAACCCCCAGAGGTGGA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QWVECQQKWIRFGMERFYSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RQQWLNPLSRGRVKLRGLSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVECHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000644585.1
CDS-3UTR GCA 90 bp TCTTGGTTGAAATACGATGTTCTCCTAGTGGTGACAGACTGGCCTGCTCCAGTGGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: SWLKYDVLLVVTDWPAPVALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...CACTGGAGCAGGCCAGTCTGTCACCACTAGGAGAACATCGTATTTCAACCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTTAGCATTGATTTATTaGCCCAAAGAAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLLALIY*PKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGTCCCTTTCATATTCTaGTCCACTATGAAATATTGT +
Preference number: 4 (lower is better)
Translates to: QENTTEVLPHRALSQLRPVPFIF*STMKYC
Trigger: ACAATATTTCATAGTGGAGCAGAATATGAAAGGGAC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGTCCCTTTCATATTCTaGTCCACTATGAAATATTGT +
Preference number: 4 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRVPFIF*STMKYC
Trigger: ACAATATTTCATAGTGGAGCAGAATATGAAAGGGAC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRPLSEP*VRGRFR
Trigger: ACGGAACCGACCCCGTACCCATGGCTCTGATAATGG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTAATGCGCAGCAGCTaGTCCCCACTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVMRSS*SPLIFS
Trigger: GGAGAAGATCAGTGGGGACCAGCTGCTGCGCATTAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVELAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: VECQQKWIRFGMERFYQLVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESILHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTAGTGGTGACAGACTaGCCTGCTCCAGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLVVTD*PAPVPC
Trigger: ACAGGGCACTGGAGCAGGCCAGTCTGTCACCACTAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
3UTR CAA 72 bp CTAAACATTAGCTTATCAATCTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGATCCGATTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LNISLSICESNG*SANRSGSDLAW
Trigger: CCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGACTCACAGATTGATAAGCTAATGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 72 bp TTTCAACTGCCACCCCACCACAGTCTGATGATTAACTaGAATCACTTCATCGCCAGCATGGATTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: FQLPPHHSLMIN*NHFIASMDFLA
Trigger: TGCAAGAAAATCCATGCTGGCGATGAAGTGATTCAAGTTAATCATCAGACTGTGGTGGGGTGGCAGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADLQFIA*VAEGSR
Trigger: ACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDSKISS*WPMRLT
Trigger: GGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVENQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCACAGCAGCAAATGGTaGCCTGTCCAACCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDHSSKW*PVQPGK
Trigger: CTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTTTTGGTGGGTGTACTaGTGGTGCTGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKFWWVY*WCWKAW
Trigger: CCACGCCTTCCAGCACCATCAGTACACCCACCAAAA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTTGCAGGTGGCATTTCTaGGTTGGCAGGGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFCRWHF*VGRVDC
Trigger: GCAGTCTACCCTGCCAACTCAGAAATGCCACCTGCA...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAATCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATCAGGAGAACACAACTaGGGTGTTACCACACAGAGC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKSGEHN*GVTTQS
Trigger: GCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAATACATGACAGTGGTTaGATTTTCAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEIHDSG*IFRALQ
Trigger: CTGTAGTGCCCTGAAAATTCAACCACTGTCATGTAT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTGATAATGTGCTTCACTaGAATCAAGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFDNVLH*NQVLVS
Trigger: AGACACAAGTACTTGATTTCAGTGAAGCACATTATC...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTTGTTGGCTTCTCCTTTaGACAATATTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLCWLLL*TIFSCC
Trigger: ACAACAGGAGAATATTGTTCAAAGGAGAAGCCAACA...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATTGTTGGCTTCTCCTTTaGACAATATTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNCWLLL*TIFSCC
Trigger: ACAACAGGAGAATATTGTTCAAAGGAGAAGCCAACA...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LFSWCQENTTEVLPHRALFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGACAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGCCAGGAGCGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DSVSLNLSVASQLNPARSEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...GCTCCTGGCAGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: FSWCQENTTEVLPHRALSSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGCTGACTGGCTGTCTTaGGAATGGGAGACACTGCAC +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAADWLS*EWETLH
Trigger: GTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGTCCAATGGGTTGAGTaGCAACAGAAGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIVQWVE*QQKWIR
Trigger: TCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAGAATAGCTCATGCCTaGCCTAAGAGGCAACACCAC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIRIAHA*PKRQHH
Trigger: GTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRICHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACCAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGTCTTCCCGTCAACTaGTTGCTGTTTACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQSLPVN*LLFTGH
Trigger: GTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGTTAGCATTGATTTATTaGCCCAAAGAAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKLALIY*PKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAA...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTTAACTTGTATTCTGTaGCGAGGGAGGGTCATTTAT +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLLTCIL*RGRVIY
Trigger: ATAAATGACCCTCCCTCGGCACAGAATACAAGTTAA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAATATTGTATTTTGGAGTaGTTACATTCCAGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: WVECQQKWIRFGMERFYQYCILE*LHSSRV
Trigger: GACTCTACTGGAATGTAAGCACTCCAAAATACAATA...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642501.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGAACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAATCCCTGGGAATATATaGTTCTGCAGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKIPGNI*FCRRRG
Trigger: CCCCCTCCTCCTGCAGAACCATATATTCCCAGGGAT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVECIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRITEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTTGGCTGTCTTGCGAATaGGAGACACTGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFWLSCE*ETLHCS
Trigger: GGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCA...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGTGGCATTTCTGAGTTaGCAGGGTAGACTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAVAFLS*QGRLPP
Trigger: AGGCGGCAGTCTACCCTGCCAACTCAGAAATGCCAC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATTGCACGTCATCCTGTaGGTCACAGGCACTAACTGG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLHVIL*VTGTNW
Trigger: CCAGTTAGTGCCTGTGACCCACAGGATGACGTGCAA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGAAGTGGATCCGATTTaGCATGGAGAGGTTCTACCA +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPEVDPI*HGEVLP
Trigger: TGGTAGAACCTCTCCATGCCAAATCGGATCCACTTC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACGAGTGCCAACAGAAGTaGATCCGATTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHECQQK*IRFGME
Trigger: CTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGATTTCAGAGCAAGAGCTaGAACCAAGTTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRFQSKS*NQVFPK
Trigger: CTTTGGGAAAACTTGGTTCCAGCTCTTGCTCTGAAA...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTACATTTATACAGGAATAAGATGTaGGGTACACCAGAAACACTG +
Preference number: 4 (lower is better)
Translates to: QTTIQATARKRGQSRLHLYRNKM*GTPETL
Trigger: CAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTA...TAAATGTAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR CAA 72 bp TCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGACCTTTGTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPRPRSLQEIRL*LLPAIGPLFFF
Trigger: GAAGAAAAACAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDIQSTT*LGDHLL
Trigger: GAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGAT...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642359.1
ENST00000645791.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRRSSSS*CVMRSS
Trigger: GCTGCTGCGCATTACACATCAGGAGCTAGAAGATCT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGCACCGATCTGCAGGTaGATTTTCTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADAPICR*IFCGSS
Trigger: ACTGGAACCACAGAAAATTCACCTGCAGATCGGTGC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGCACAGGAGTGCCCATaGTGTCTTGTCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDAQECP*CLVSVH
Trigger: ATGCACTGAGACAAGACATCATGGGCACTCCTGTGC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTCAGACAGCAATGGTTaGACCCGCTATCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKSDSNG*TRYLEA
Trigger: TGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGGCAAAACCTTGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAAGGGAAGGTAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: WQNLGVLSIDLLPQRREGKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...ACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTCTTGGAAAATGGCTaGTTTGAGATCTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEFLENG*FEICCT
Trigger: TGTGCAACAGATCTCAAATCAGCCATTTTCCAAGAA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTATACATGACAGTGGTTaGATTTTCAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSIHDSG*IFRALQ
Trigger: CTGTAGTGCCCTGAAAATTCAACCACTGTCATGTAT...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCGATAATGTGCTTCACTaGAATCAAGTACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIDNVLH*NQVLVS
Trigger: AGACACAAGTACTTGATTTCAGTGAAGCACATTATC...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGATTCCAGCAGCCTTTaGGGAGTTGGATCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQDSSSL*GVGSSM
Trigger: CATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATC...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGTTAAAAGTGCATCATaGGGGCAGAGTTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQVKSAS*GQSCCI
Trigger: GATGCAGCAACTCTGCCCTCATGATGCACTTTTAAC...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGACTCTCTATCCATTCTaGTTATGTTGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLTLYPF*LCWLLL
Trigger: AAGGAGAAGCCAACATAATCAGAATGGATAGAGAGT...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGGAGAAATAGTCCAGTaGGAAGAGATGAGAATGATA +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRGEIVQ*EEMRMI
Trigger: TATCATTCTCATCTCTTCTCACTGGACTATTTCTCC...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ACTGTACAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTAGTAAAATACTTAACATaGTGCTTGGCACACTGTAAG +
Preference number: 4 (lower is better)
Translates to: TVQTTIQATARKRGQSRLVKYLT*CLAHCK
Trigger: CTTACAGTGTGCCAAGCATCATGTTAAGTATTTTAC...TAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTGTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: NSKDEAILVACKRLMLSLTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SAGSQAGIHKGDSLKPKLNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...TAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTCTCCTGTACAGTTGTaGAAAGTCTGCAAAACGATA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVSPVQL*KVCKTI
Trigger: TATCGTTTTGCAGACTTTGCACAACTGTACAGGAGA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATTCCCGTCAACTGCTTaGTGTTTACAGGCCACAACC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRFPSTA*CLQATT
Trigger: GGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTCCCGTCAACTGCTTaGTGTTTACAGGCCACAACC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADFPSTA*CLQATT
Trigger: GGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTTAGCATTGATTTATTaGCCCAAAGAAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILALIY*PKEGKV
Trigger: AACCTTCCCTTCTTTGGGGCAATAAATCAATGCTAA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCATGCTGCATCAAACTATaGCGAGGTATCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPCCIKL*RGISQR
Trigger: TCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCA...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCAGAAACAAATCAGGATaGAGAGATCTGCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLRNKSG*RDLQRK
Trigger: TTTTCTCTGCAGATCTCTGCATCCTGATTTGTTTCT...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACGCACAAGGGGGTTGTaGTCTTCTAAACCACACTTT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRTRGL*SSKPHF
Trigger: AAAGTGTGGTTTAGAAGAGCACAACCCCCTTGTGCG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR GCA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTGGTTTTGCCCAAATATaGCTCTACTTGAACACAAAA +
Preference number: 4 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLGFAQI*LYLNTK
Trigger: TTTTGTGTTCAAGTAGAGGCATATTTGGGCAAAACC...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVILAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESILAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRICIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCATCGAGGGAGGTCGTaGGTATGTATCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAHRGRS*VCIIWG
Trigger: CCCCCATATGATACATACCCACGACCTCCCTCGATG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTCTTCCACATAAGGACTaGCGCAACTCATCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATLPHKD*RNSSRE
Trigger: CTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAG...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CCA 90 bp TGCATATCCTGCAGTCAGCATATTAATTCTGTTAAGCCACCTGTTCATATCATCACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: CISCSQHINSVKPPVHIITEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...GATGATATGAACAGGTGGCTTAACAGAATTAATATGCTGACTGCAGGATATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESITEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGGATCCGATTTGGCATaGAGAGGTTCTACCAACTCT +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIGSDLA*RGSTNS
Trigger: AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACCCTCTTATATCCCTTTaGGAGGCCCCCAATCCAAAA +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHPLISL*EAPNPK
Trigger: TTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGG...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGAGTTGGATCTTCAATaGTGGGGAAGACATGTAATA +
Preference number: 4 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRELDLQ*WGRHVI
Trigger: TATTACATGTCTTCCCCACCATTGAAGATCCAACTC...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTACATTTAGAGTTGGATCTTCAATaGTGGGGAAGACATGTAATA +
Preference number: 4 (lower is better)
Translates to: QTTIQATARKRGQSRLHLELDLQ*WGRHVI
Trigger: TATTACATGTCTTCCCCACCATTGAAGATCCAACTC...TAAATGTAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp GCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGACTATCCCAACCTaGTTATTTTCCATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ATCVFTGIRCGVHQKHCLLTIPT*LFSIPV
Trigger: TACTGGAATGGAAAATAACCAGGTTGGGATAGTCAA...GAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTGACTATCCCAACCTaGTTATTTTCCATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQLTIPT*LFSIPV
Trigger: TACTGGAATGGAAAATAACCAGGTTGGGATAGTCAA...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAAAATACCAGTTTGTTaGAATCTCTTGCACATTGCT +
Preference number: 4 (lower is better)
Translates to: CQENTTEVLPHRALSQLRKIPVC*NLLHIA
Trigger: AGCAATGTGCAAGAGATTCCAACAAACTGGTATTTT...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAAAATACCAGTTTGTTaGAATCTCTTGCACATTGCT +
Preference number: 4 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSKIPVC*NLLHIA
Trigger: AGCAATGTGCAAGAGATTCCAACAAACTGGTATTTT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESINQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000642359.1
ENST00000645074.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCACCATATGTCCTCTaGGGTCTTCACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPPYVL*GLHKEG
Trigger: ACCTTCCTTGTGAAGACCTCAGAGGACATATGGTGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGGTGAGTCCAATGGGTTaGGTGCCAACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKVSPMG*VPTEVD
Trigger: ATCCACTTCTGTTGGCACTCAACCCATTGGACTCAC...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCATAAGCAATATTGATTaGGCCATAGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPISNID*AIGDPV
Trigger: AACTGGGTCCCCTATGGCTCAATCAATATTGCTTAT...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR TCA 90 bp GAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ESEDSVSLNLSVASQLNPVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...AGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRINVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAAAAACAGCAAATTGTaGCTTGTACATTATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVKNSKL*LVHYAA
Trigger: GGCTGCATAATGTACAAGTCACAATTTGCTGTTTTT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGCCACTCTTCTCAAGTaGTATTCCCGAGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQATLLK*YSRDCF
Trigger: AAAACAGTCTCGGGAATATCACTTGAGAAGAGTGGC...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAGCCACTCTTCTCAAGTaGTATTCCCGAGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: INLCSPATCVFTGIRCGVATLLK*YSRDCF
Trigger: AAAACAGTCTCGGGAATATCACTTGAGAAGAGTGGC...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGAAGTCTATCTTCTTCTTaGCTATCCCAACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRSLSSS*LSQPGY
Trigger: ATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACT...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR TCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTGGACAGAGTCCAAAATaGGAGACAACAGTGAGAGTA +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIGQSPK*ETTVRV
Trigger: TACTCTCACTGTTGTCTCTCATTTTGGACTCTGTCC...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGACTCGGAGACCATTTaGTCACCGGTTCCATTATCA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADDSETI*SPVPLS
Trigger: TGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSLLCLKEATKESIKQPEEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACATATGGAAGTCAAAGTaGTGGCTCTCAGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHIWKSK*WLSGRN
Trigger: ATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATAT...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCTTCAACCATCATATATaGCACTCTTCTCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLFNHHI*HSSQVI
Trigger: TATCACTTGAGAAGAGTGGCATATATGATGGTTGAA...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTCAACCATCATATATaGCACTCTTCTCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQFNHHI*HSSQVI
Trigger: TATCACTTGAGAAGAGTGGCATATATGATGGTTGAA...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATGTACACCAGAAACACTaGCTCTTGTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHVHQKH*LLWSQF
Trigger: AAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTAC...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGTGTCCCACTCATATTTaGATTTCCCCTTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALCPTHI*ISPSST
Trigger: GGTAGAAGAAGGGGAAATGCAAATATGAGTGGGACA...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATTGGCAATTTTCGGCTaGTCCTCCCATCATAATGGC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLAIFG*SSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGGTCAGAAAGTCGTTTaGCAATTTTCGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKGQKVV*QFSAGP
Trigger: AGGACCAGCCGAAAATTGCCAAACGACTTTCTGACC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDRQADS*LLQSDP
Trigger: TGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAGATCCCTTATGCACTaGCTTGCCCACCATATGTCC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDRSLMH*LAHHMS
Trigger: GGACATATGGTGGGCAAGCCAGTGCATAAGGGATCT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000645791.1
CDS-3UTR CCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATGGGTATGTATCATATaGGGGTGGAGGGCTATCTTG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRWVCII*GWRAIL
Trigger: CAAGATAGCCCTCCACCCCCATATGATACATACCCA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAACTGAGAAGTCTCCGTaGAGGAAAGTCGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKTEKSP*RKVGYV
Trigger: AACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGAAAACACTGCCTCTTGTaGTCTCAGTTTTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRKHCLL*SQFSVS
Trigger: AGATACTGAAAACTGAGACCACAAGAGGCAGTGTTT...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAATGGATAACGAGTTCTaGTACATATTTCGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPMDNEF*YIFRKG
Trigger: TCCCTTCCGAAATATGTACCAGAACTCGTTATCCAT...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp GCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCATTGAAGTAAGAACATaGGTCTTAGAGTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATCVFTGIRCGVHQKHCLIEVRT*VLESKN
Trigger: GTTCTTTGACTCTAAGACCCATGTTCTTACTTCAAT...GAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATAAGGAGGATTCCAATTaGTCCAACTGTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHKEDSN*SNCCSR
Trigger: CCTGCTACAACAGTTGGACCAATTGGAATCCTCCTT...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp CAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTACATTTAGAGTCTAAATTGGTATaGAACAATACTGGCAATCTC +
Preference number: 4 (lower is better)
Translates to: QTTIQATARKRGQSRLHLESKLV*NNTGNL
Trigger: GAGATTGCCAGTATTGTTCCATACCAATTTAGACTC...TAAATGTAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADNQIHN*GQKVVW
Trigger: CCAAACGACTTTCTGACCTCAGTTGTGGATCTGATT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR TCA 90 bp AATACATTTAGACATGCGTTTCAATGTATGAATGAGTGTGTGCTAGAGAGGAAGTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: NTFRHAFQCMNECVLERKCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...CTTCCTCTCTAGCACACACTCATTCATACATTGAAACGCATGTCTAAATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLTQWVI*GGILTD
Trigger: ATCTGTCAAAATACCACCTCAAATGACCCACTGAGT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAAGGGAAAAGGAGAGATaGATATTAAGGGGATACCAC +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQREKER*ILRGYH
Trigger: GTGGTATCCCCTTAATATTCATCTCTCCTTTTCCCT...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCTCATTCATTTCTGCTaGAGTCCAGGGAAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTILIHFC*SPGKEV
Trigger: TACCTCCTTCCCTGGACTTCAGCAGAAATGAATGAG...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAAGCAGACTCTTGGCTaGTCCAATCAGATCCACAAC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDKQTLG*SNQIHN
Trigger: GTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGAACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGGGAATATATGGTTCTaGAGGAGGAGGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDGNIWF*RRRGNV
Trigger: TACATTCCCCCTCCTCCTGCAGAACCATATATTCCC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGATTCAGATCCCTTATaGACTGGCTTGCCCACCATA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDDSDPL*TGLPTI
Trigger: TATGGTGGGCAAGCCAGTGCATAAGGGATCTGAATC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGAGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACCGAGGCCATTTTAGTTaGTTGCAAGAGGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHRGHFS*LQEVDV
Trigger: AACATCAACCTCTTGCAAGCAACTAAAATGGCCTCG...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGCCATAAGTTGGGGTaGTTTCTCGTCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDCHKLG*FLVFLD
Trigger: GTCAAGGAAGACGAGAAAGCACCCCAACTTATGGCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATCTCCTGTACAGTTGTaGAAAGTCTGCAAAACGATA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRISPVQL*KVCKTI
Trigger: TATCGTTTTGCAGACTTTGCACAACTGTACAGGAGA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATTCAGTTTACAGTGCTaGCTCTCTCCTAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIFSLQC*LSPRFE
Trigger: TTCAAATCTAGGAGAGAGGCAGCACTGTAAACTGAA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGAAGGCAACTAACATTTaGATTGAGAACACCCGAATA +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEKATNI*IENTRI
Trigger: TATTCGGGTGTTCTCAATGCAAATGTTAGTTGCCTT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTTAACTTGTATTCTGTaGCGAGGGAGGGTCATTTAT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRLTCIL*RGRVIY
Trigger: ATAAATGACCCTCCCTCGGCACAGAATACAAGTTAA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAGAGAAGAAAGGCGGTTaGAAAGTTGTTATTGAGCTC +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPEKKGG*KVVIEL
Trigger: GAGCTCAATAACAACTTTGCAACCGCCTTTCTTCTC...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CCA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLCLKEATKESIKQPEFSVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATATGTATGGTATAGTGTaGTCTCTGGCACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDMYGIV*SLAQEC
Trigger: GCACTCCTGTGCCAGAGACCACACTATACCATACAT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGTATCATATGGGGGTaGAGGGCTATCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADCIIWG*RAILFW
Trigger: CCAAAACAAGATAGCCCTCCACCCCCATATGATACA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGCATTCAGACAGCAATaGTTGAACCCGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAAFRQQ*LNPLSR
Trigger: TCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTCACAGGCACTAACTaGAGCATTCAGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVTGTN*SIQTAM
Trigger: CATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCCAGCAGGTACTAGATaGTCTGAAGGCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADPAGTR*SEGRIH
Trigger: ATGTATTCTGCCTTCAGACCATCTAGTACCTGCTGG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCATTTCAGAGCAAGAGCTaGAACCAAGTTTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPFQSKS*NQVFPK
Trigger: CTTTGGGAAAACTTGGTTCCAGCTCTTGCTCTGAAA...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAATACAGGAATAAGATGTaGGGTACACCAGAAACACTG +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQYRNKM*GTPETL
Trigger: CAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTA...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCCTTCTTCTCCTACCTTaGCCCCACTTAATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILLLLLP*PHLIFH
Trigger: ATGAAAGATTAAGTGGGGCCAAGGTAGGAGAAGAAG...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR CAA 72 bp CGGCCAAGATCTTTGCAAGAAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTGTTTTTCTTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: RPRSLQEIRLLL*PAIGPLFFFFD
Trigger: ATCAAAGAAGAAAAACAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
3UTR CAA 72 bp GATATCCAAGAAAAGGTCGAGGTACATCTGCTTCCATaGTTGGAATTCTTTAGATGTCAAGTCTGGATTGTC +
Preference number: 4 (lower is better)
Translates to: DIQEKVEVHLLP*LEFFRCQVWIV
Trigger: GACAATCCAGACTTGACATCTAAAGAATTCCAACAATGGAAGCAGATGTACCTCGACCTTTTCTTGGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR TCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGGAGGTAAGCATGCTCTaGGGTCGCTTTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKEVSML*GRFFKV
Trigger: AACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTC...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642359.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGCAGTGAGGACTGCTaGAATGTATGGTATAGTGTG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDCSEDC*NVWYSV
Trigger: CACACTATACCATACATTTCAGCAGTCCTCACTGCA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGCATCTTGATTGGCTTTaGTCTTATGCTAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKHLDWL*SYASPN
Trigger: ATTGGGACTAGCATAAGATCAAAGCCAATCAAGATG...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp CTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATTGGACAATGATATCTACTGTGCTCCATCTTaGTTGGCTTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: LVHISEGICDLVKLDNDIYCAPS*LALILC
Trigger: GCATAAGATCAAAGCCAATCAAGATGGAGCACAGTA...GATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAAAATAAGCAATATTaGTTGAGCCATAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: IHNLLSLLCLKEATKESIKNKQY*LSHRGP
Trigger: GGGTCCCCTATGGCTCAATCAATATTGCTTATTTTT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAACTCAGTGGGTCATTTaGGGTGGTATTTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRTQWVI*GGILTD
Trigger: ATCTGTCAAAATACCACCTCAAATGACCCACTGAGT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAAGTCTATCTTCTTCTTaGCTATCCCAACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: INLCSPATCVFTGIRCGVSLSSS*LSQPGY
Trigger: ATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACT...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTACTCTCTATCCATTCTaGTTATGTTGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVITLYPF*LCWLLL
Trigger: AAGGAGAAGCCAACATAATCAGAATGGATAGAGAGT...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCGGACATAGTCAGATTTaGGAGACATTCATTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPGHSQI*ETFILV
Trigger: TACAAGAATGAATGTCTCTCAAATCTGACTATGTCC...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCATCTTACTTATCTGAGTaGAAGAAGCAGAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPSYLSE*KKQSEE
Trigger: TTCCTCACTCTGCTTCTTTCACTCAGATAAGTAAGA...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR TCA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCTTGCAAAGTTGTTATTaGGCTCCTAATGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTILQSCY*APNVCP
Trigger: CGGGCACACATTAGGAGCTCAATAACAACTTTGCAA...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TGCATATCCTGCAGTCAGCATATTAATTCTGTTAAGCCACCTGTTCATATCATCGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: CISCSQHINSVKPPVHIIAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...GATGATATGAACAGGTGGCTTAACAGAATTAATATGCTGACTGCAGGATATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCAGCATGGATTTTCTTaGACCGATCTGCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDQHGFS*TDLQVN
Trigger: ATTCACCTGCAGATCGGTGCAAGAAAATCCATGCTG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVESFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATTTCCATTTAGCACTTaGATCCTCTCACTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRFPFST*ILSLSA
Trigger: AGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTTCTTAAGAGTGGCCTaGCCCTCTTATATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAFLRVA*PSYIPL
Trigger: CAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGAGTTTTCTGTTACTGTaGTCCATCTTGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRSFLLL*SILIGF
Trigger: AAAGCCAATCAAGATGGAGCACAGTAACAGAAAACT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATCAGGTATTCACATTATaGAATACCACACACTGCGGT +
Preference number: 4 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDQVFTL*NTTHCG
Trigger: ACCGCAGTGTGTGGTATTGCATAATGTGAATACCTG...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAGGTCGAGGTACATCTaGTTCCATTGTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADRSRYI*FHCWNS
Trigger: AGAATTCCAACAATGGAAGCAGATGTACCTCGACCT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTATATAGCTGTTAGCTaGCTTTCTGGGTGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLYIAVS*LSGCVK
Trigger: CTTAACACACCCAGAAAGGCAGCTAACAGCTATATA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTCTCCTGTACAGTTGTaGAAAGTCTGCAAAACGATA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSPVQL*KVCKTI
Trigger: TATCGTTTTGCAGACTTTGCACAACTGTACAGGAGA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATCTCCTGTACAGTTGTaGAAAGTCTGCAAAACGATA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQSPVQL*KVCKTI
Trigger: TATCGTTTTGCAGACTTTGCACAACTGTACAGGAGA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGGATTACTGAAAATGTaGTGTAGAAAGGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRGLLKM*CRKATL
Trigger: GAGAGTGGCCTTTCTACAGCACATTTTCAGTAATCC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGACTTCAGTTTACAGTaGTGCCTCTCTCCTAGATTT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKDFSLQ*CLSPRF
Trigger: AAATCTAGGAGAGAGGCAGCACTGTAAACTGAAGTC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGACAGGGATATGATGTaGTCACAGACTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDDRDMM*SQTPER
Trigger: TCTTTCTGGAGTCTGTGACCACATCATATCCCTGTC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGACTTCATCGCCAGCATaGATTTTCTTGCACCGATCT +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKTSSPA*IFLHRS
Trigger: AGATCGGTGCAAGAAAATCCATGCTGGCGATGAAGT...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAGAGTTTTCATAAGTTaGGGTGCTTTCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADRVFIS*GAFSSS
Trigger: GGAAGACGAGAAAGCACCCCAACTTATGAAAACTCT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425654.7
ENST00000645245.1
CDS-3UTR CCA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAAAACACTGCCTCTTGTaGTCTCAGTTTTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQKHCLL*SQFSVS
Trigger: AGATACTGAAAACTGAGACCACAAGAGGCAGTGTTT...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAATGGATAACGAGTTCTaGTACATATTTCGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKMDNEF*YIFRKG
Trigger: TCCCTTCCGAAATATGTACCAGAACTCGTTATCCAT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
3UTR CAA 72 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATTTATTGCCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TVFTTSSSDGKT*VSLALIYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
3UTR CAA 72 bp TGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTaGACTATCCCAACCTGGTTATTTTCCATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: CRTSYLLQSIFF*TIPTWLFSIPV
Trigger: TACTGGAATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACTTTCTCGTCTTCCTTaGCTACTTGATCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKLSRLP*LLDLPF
Trigger: AAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCTTTAAAGTGCTTTTaGGAATTCTCAGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPLKCF*EFSAGV
Trigger: TACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGTTTCAATGTATGAATaGGTGTGTGCTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKVSMYE*VCAREE
Trigger: TTCCTCTCTAGCACACACTCATTCATACATTGAAAC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTACAAAGCTTTGCCCTaGTACACCAAGTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDYKALP*YTKCSH
Trigger: ATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAATGTGACATCTCTTTaGATGACCATCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDNVTSL*MTITCL
Trigger: CAAGCAGGTGATGGTCATTCAAAGAGATGTCACATT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCAAGCCATAATTCAATaGACACAGAAGGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAQAIIQ*TQKVNC
Trigger: GCAGTTGACCTTCTGTGTGCATTGAATTATGGCTTG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAATCCTCTCTCTTTCTaGATATCCTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDNPLSF*ISCSQH
Trigger: ATGCTGACTGCAGGATATGCAGAAAGAGAGAGGATT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTATATAGCTGTTAGCTaGCTTTCTGGGTGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADYIAVS*LSGCVK
Trigger: CTTAACACACCCAGAAAGGCAGCTAACAGCTATATA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGTGACTTGTACATTATaGAGCCAGACACTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRVTCTL*SQTLKS
Trigger: GCTTTTTAGTGTCTGGCTGCATAATGTACAAGTCAC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATCTCCTGTACAGTTGTaGAAAGTCTGCAAAACGATA +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRSPVQL*KVCKTI
Trigger: TATCGTTTTGCAGACTTTGCACAACTGTACAGGAGA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCCACAAATTTAATGTaGGTCAATATCCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPTNLM*VNIHAV
Trigger: TACTGCATGGATATTGACGCACATTAAATTTGTGGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAGTAGAACATCCTATTTaGTGCAGTCTATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPVEHPI*CSLSSS
Trigger: AGAAGAAGATAGACTGCAGCAAATAGGATGTTCTAC...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCAGAAACAAATCAGGATaGAGAGATCTGCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILRNKSG*RDLQRK
Trigger: TTTTCTCTGCAGATCTCTGCATCCTGATTTGTTTCT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR GCA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAAAGGCAACTAACATTTaGATTGAGAACACCCGAATA +
Preference number: 4 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKKATNI*IENTRI
Trigger: TATTCGGGTGTTCTCAATGCAAATGTTAGTTGCCTT...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTCTTTTGCTCTTGCCTaGTATAGGACCTTGTATTAT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSFALA*YRTLYY
Trigger: ATAATACAAGGTCCTATAGCAGGCAAGAGCAAAAGA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR GCA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTAAAAAGGTAAACAGATaGACAGTTACCATGACTCAC +
Preference number: 4 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIKKVNR*TVTMTH
Trigger: GTGAGTCATGGTAACTGTGCATCTGTTTACCTTTTT...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CCA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTAGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: INLCSPATCVFTGIRCGVVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATTCCTTTTTCATCCCTaGGAATATATGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKFLFHP*EYMVLQ
Trigger: CTGCAGAACCATATATTCCCAGGGATGAAAAAGGAA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCGGTATGGAACAATACTaGCAATCTCACTATTCTAGT +
Preference number: 4 (lower is better)
Translates to: PHSLSILIMLASPLNNILGMEQY*QSHYSS
Trigger: ACTAGAATAGTGAGATTGCCAGTATTGTTCCATACC...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644798.1
3UTR CAA 72 bp GTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATaGGACAATGATATCCTTGTGGAAACAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VHISEGICDLVK*DNDILVETVVP
Trigger: AGGAACAACTGTTTCCACAAGGATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR TCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAAAAACAGCAAATTGTaGCTTGTACATTATGCAGCC +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRKNSKL*LVHYAA
Trigger: GGCTGCATAATGTACAAGTCACAATTTGCTGTTTTT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAACAGTACAATCCTGTTaGACAATTGTTGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKTVQSC*TIVVNS
Trigger: GGAGTTAACAACAATTGTGCAACAGGATTGTACTGT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGCTTGGTTTAATGTTTaGCAGTTGAATCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDAWFNV*QLNHFQ
Trigger: CTGGAAGTGATTCAACTGGCAAACATTAAACCAAGC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADEQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGAGCAATCTTTTCATTaGTCATATACCGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIREQSFH*SYTEVE
Trigger: CTCTACTTCGGTATATGAGCAATGAAAAGATTGCTC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGCCATTTTAGTTGCTTaGAAGAGGTTGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAAILVA*KRLMLS
Trigger: ACTCAACATCAACCTCTTGCAAGCAACTAAAATGGC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCCCTGTATAAATCTTaGAATGAGTCTCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKALYKS*NESPNF
Trigger: AAAGTTAGGAGACTCATTGCAAGATTTATACAGGGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGCTTAGCTCTTGTATaGGCATCTACATTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADCLALV*ASTFHK
Trigger: TTTGTGAAATGTAGATGCGCATACAAGAGCTAAGCA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCATCTTACAAAGCTTTaGCCTGATACACCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDHLTKL*PDTPSV
Trigger: AACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGCATATCCTGCAGTCAGCATATTAATTCTGTTAAGCCACCTGTTCATATCATCGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CISCSQHINSVKPPVHIIAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...GATGATATGAACAGGTGGCTTAACAGAATTAATATGCTGACTGCAGGATATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR GCA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGCACAGTCATTTTCATaGTGTGATCACTTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLAQSFS*CDHFQK
Trigger: TTTTTGAAAGTGATCACAGCATGAAAATGACTGTGC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAACCTTGTATTATAATTaGACTGAAGAAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKTLYYN*TEEEAG
Trigger: GCCAGCTTCTTCTTCAGTGCAATTATAATACAAGGT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR CCA 90 bp CTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATTGGACAATGATATCGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: LVHISEGICDLVKLDNDIVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...GATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTGGGTCATTTGAGGTaGTATTTTGACAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVGHLR*YFDRYP
Trigger: TGGATATCTGTCAAAATACCACCTCAAATGACCCAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGGACTAGGGGAAAATTaGAAACTAAGTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDGLGEN*KLSGKL
Trigger: CAACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR TCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTGTGGTTTTACTACTTaGAGACCACCTGTATTTAGA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDCGFTT*RPPVFR
Trigger: TCTAAATACAGGTGGTCTTCAAGTAGTAAAACCACA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTCTTTCTGCATATCCTaGAGTCAGCATATTAATTCT +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADSFCIS*SQHINS
Trigger: AGAATTAATATGCTGACTGCAGGATATGCAGAAAGA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCAGTTGTGCAAAGTCTaGAAAACGATAGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDQLCKV*KTIVIQ
Trigger: TTGAATCACTATCGTTTTGCAGACTTTGCACAACTG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATACAAAAGTAAAAGCTaGTTAGTAGCAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKYKSKS*LVATEL
Trigger: TAGCTCTGTTGCTACTAAGCAGCTTTTACTTTTGTA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTACAAAAGTAAAAGCTaGTTAGTAGCAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LKDESTFTELYRQQYKADYKSKS*LVATEL
Trigger: TAGCTCTGTTGCTACTAAGCAGCTTTTACTTTTGTA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR GCA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCGTAGAACATCCTATTTaGTGCAGTCTATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTIVEHPI*CSLSSS
Trigger: AGAAGAAGATAGACTGCAGCAAATAGGATGTTCTAC...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTTCCAGTAATTACATaGAGGCCATCATATGTAGAT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVPVIT*RPSYVD
Trigger: ATCTACATATGATGGCCTCCATGTAATTACTGGAAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
3UTR CAA 72 bp ATACCTGAACTTTTCTTATGTCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGCATCTACATTTCACAA +
Preference number: 4 (lower is better)
Translates to: IPELFLCRCSSI*LSSCMRIYISQ
Trigger: TTGTGAAATGTAGATGCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCGACATAAGAAAAGTTCAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTTCTTAATATACTGCTaGAAACAGTCATCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDFLIYC*KQSSRP
Trigger: AGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR GCA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTACAAAAGTAAAAGCTaGTTAGTAGCAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDYKSKS*LVATEL
Trigger: TAGCTCTGTTGCTACTAAGCAGCTTTTACTTTTGTA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS GCA 90 bp CGACAGGGAGGTAAACGTGCAGGAGTCGTGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCGGCGGCGGCGGCGGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RQGGKRAGVVAPRRV*SVPAKAAAAAAAAA
Trigger: AGCAGCAGCAGCCGCCGCCGCCGCCGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTTTACCTCCCTGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS CCA 90 bp ACCGCCGGCAGGAACGGCGACAGGGAGGTAAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCTCAGTTCCCGCTAAGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: TAGRNGDREVNVQES*LRAGSAQFPLRRRR
Trigger: CCGCCGCCGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTTTACCTCCCTGTCGCCGTTCCTGCCGGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS TCA 90 bp CGCTCCGCTCCGGTCTCCGTCCCTAGGGAGCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGTCGCCGAGGGAAGCAGCCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: RSAPVSVPRELQFIA*VAEGSRRRGKQPLP
Trigger: CGGCAGAGGCTGCTTCCCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAGCTCCCTAGGGACGGAGACCGGAGCGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS-3UTR CAA 90 bp CCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGGGGCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PVLWGDGRGVREDRILQGLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...CCCCTGGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTACGCCCTCAGCCAACTaGCCCGCTCGCCTCACGCGC +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATTPSAN*PARLTR
Trigger: GCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGACGCCCTCAGCCAACTaGCCCGCTCGCCTCACGCGC +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVTPSAN*PARLTR
Trigger: GCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCACTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLALRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCACTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VAASNYAEVSPRERDVVALRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS GCA 90 bp CTCACCGGTTCCATTATCAGAGCCATGGGTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGACACAAAACGAACTCAGCAGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LTGSIIRAMGTGSVP*RAQSSDTKRTQQPE
Trigger: CTCGGGCTGCTGAGTTCGTTTTGTGTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: AALTGCLANGRHCTAPSYPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: AMVEPAISRQSKTSRLAPLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...GGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: TAACALGRWPRSQRRQNPCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS GCA 90 bp AAGACCGGTTCCATTATCAGAGCCATGGGTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGACACAAAACGAACTCAGCAGCCCGAG +
Preference number: 5 (lower is better)
Translates to: KTGSIIRAMGTGSVP*RAQSSDTKRTQQPE
Trigger: CTCGGGCTGCTGAGTTCGTTTTGTGTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645679.1
CDS-3UTR CAA 90 bp AGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAACGCCCTCAGCCAACTaGCCCGCTCGCCTCACGCGC +
Preference number: 5 (lower is better)
Translates to: RQNPPGAESEDSVSLNLSTPSAN*PARLTR
Trigger: GCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGT...TGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS CCA 90 bp CTTGACTCGGAGACCATTTGCTCACCGGTTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGTGCAGAGCGCAGAGCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: LDSETICSPVPLSEP*VRGRFRAERRAQTQ
Trigger: TTGTGTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS-3UTR CAA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: TAACALGRWPRSQRRQNPPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATACGCCCTCAGCCAACTaGCCCGCTCGCCTCACGCGC +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHTPSAN*PARLTR
Trigger: GCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: KARILLKSGLPLLYPFGRRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTCCCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CRLCSGEMAAESEKTESSPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...GGAGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: GADWLSCEWETLHCSQLLFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: TAACALGRWPRSQRRQNPEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCCTCCTCCTCCTCCTCCTCTTCCTCCACCTCTGGGGGTTGCACGTCATCCTGTCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LLLLLLLFLHLWGLHVILSVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGA...CAGGATGACGTGCAACCCCCAGAGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS CCA 90 bp GGCTTCTCCACTTTTGAGGCTTTGGGACCTGGACTGAGCCACTACTaGCTTCCTTACTCCTCAGCTTGCAGACAGCCTATTGTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: GFSTFEALGPGLSHY*LPYSSACRQPIVGV
Trigger: AACTCCCACAATAGGCTGTCTGCAAGCTGAGGAGTAAGGAAGCCAGTAGTGGCTCAGTCCAGGTCCCAAAGCCTCAAAAGTGGAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 90 bp GATATAGGTCGTAGCTTGCCCTCAATGTGGGTGGCACCATCCAACTaGCTGTCAGCATGGCTAGAAACAGCAGGCAGAAGGAGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: DIGRSLPSMWVAPSN*LSAWLETAGRRRWN
Trigger: ATTCCACCTCCTTCTGCCTGCTGTTTCTAGCCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACGACCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AALTGCLANGRHCTAPSYFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS TCA 90 bp CAACCAGGCAAGCAGACTCTTGGCTGCTCCAATCAGATCCACAACTaGGGTCAGAAAGTCGTTTGGCAATTTTCGGCTGGTCCTCCCATC +
Preference number: 5 (lower is better)
Translates to: QPGKQTLGCSNQIHN*GQKVVWQFSAGPPI
Trigger: GATGGGAGGACCAGCCGAAAATTGCCAAACGACTTTCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS GCA 90 bp CATCAAGACCTTTCATCCAGTCCACTACTTGACTCGGAGACCATTTaGTCACCGGTTCCATTATCAGAGCCATGGGTACGGGGTCGGTTC +
Preference number: 5 (lower is better)
Translates to: HQDLSSSPLLDSETI*SPVPLSEPWVRGRF
Trigger: GAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGACGCCCTCAGCCAACTaGCCCGCTCGCCTCACGCGC +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLTPSAN*PARLTR
Trigger: GCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000425654.7
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: INLCSPATCVFTGIRCGVLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: RQQWLNPLSRGRVKLRGLPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ACTGCCGCCTGTGCTCTGGGGAGATGGCCGCGGAGTCAGAGAAGACAGAATCCTGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: TAACALGRWPRSQRRQNPAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...AGGATTCTGTCTTCTCTGACTCCGCGGCCATCTCCCCAGAGCACAGGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: GADWLSCEWETLHCSQLLIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...AAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: KSPWRKVGYVLLPHKDWRFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CAA 90 bp GCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCCACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 5 (lower is better)
Translates to: AMVEPAISRQSKTSRLAPHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...GGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS CCA 90 bp TCACAGCAGCAAATGGTGACCTGTCCAACCAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCACAACTGAGGTCAGAAAGTCGTTTG +
Preference number: 5 (lower is better)
Translates to: SQQQMVTCPTRQADS*LLQSDPQLRSESRL
Trigger: CAAACGACTTTCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCGTCTCAATTAAATCCTGCCAGGAGCGGCGCTGACTGGCTGTCTTGCGAATGGAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: ASQLNPARSGADWLSCEWSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...CCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATTGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp GCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: AVLRMGDTALLPVTSWRNPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...GTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: QNPPGAESEDSVSLNLSVFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: KARILLKSGLPLLYPFGRFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVELHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: KARILLKSGLPLLYPFGRPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCGGCGCTGACTGGCTGTCTTGCGAATGGGAGACACTGCACTGCTCCCAGTTACTGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: AALTGCLANGRHCTAPSYCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...GTAACTGGGAGCAGTGCAGTGTCTCCCATTCGCAAGACAGCCAGTCAGCGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp GTTGCTGCATCAAACTATGCCGAGGTATCTCCCAGAGAGAGGGATGTAGTGGCAATCATGAGGGCAGAGTaGCTGCATCAAACTATGCCG +
Preference number: 5 (lower is better)
Translates to: VAASNYAEVSPRERDVVAIMRAE*LHQTMP
Trigger: CGGCATAGTTTGATGCAGCAACTCTGCCCTCATGAT...TGCCACTACATCCCTCTCTCTGGGAGATACCTCGGCATAGTTTGATGCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS TCA 90 bp TGGCTAGAAACAGCAGGCAGAAGGAGGTGGAATAAGCTGGCTTGCTaGGTCTTTCGGCTTTCATCTTTCTCCCATGCTAGATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WLETAGRRRWNKLAC*VFRLSSFSHARWFL
Trigger: CAGGAACCATCTAGCATGGGAGAAAGATGAAAGCCGAAAGACTCAGCAAGCCAGCTTATTCCACCTCCTTCTGCCTGCTGTTTCTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS GCA 90 bp AGAAGAGGCTTGCTTTGGAAGAGGAGGCAAGCACTTGGTGAGGTCTaGTTCCTGATTGACTTTCTTTCAATGTGCCAGTTCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: RRGLLWKRRQALGEV*FLIDFLSMCQFSHW
Trigger: CCAGTGGCTGAACTGGCACATTGAAAGAAAGTCAATCAGGAAGCAGACCTCACCAAGTGCTTGCCTCCTCTTCCAAAGCAAGCCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643484.1
ENST00000645238.1
CDS GCA 90 bp TCTTCACCAGTTTTATGTCCTTACCAATGCACACAGAAGGTCAACTaGTTCCAAGATCAGTTCCTGATGGCCAATGCGGCTGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSPVLCPYQCTQKVN*FQDQFLMANAADPQ
Trigger: CTGGGGGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGAAGCAGTTGACCTTCTGTGTGCATTGGTAAGGACATAAAACTGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTCAGGTGGGGTCCCTaGCTGGCCGCAGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLRWGP*LAAASL
Trigger: CAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFSWCQENTTEVLPHRALRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LRGMAHSDPAGGISELAGFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...CCCTGCCAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: LRGMAHSDPAGGISELAGYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...CCCTGCCAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCATTAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: MVEPAISRQSKTSRLAPISAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...AATGGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: DEAILVACKRLMLSLRRTSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp GCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTGGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: AMFCFHIRTGATHRGRSWEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CCACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: LPGETPHEKTETEKSPWRKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...CCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTGGCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 5 (lower is better)
Translates to: AMFCFHIRTGATHRGRSWRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...CCACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCACCACCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAPPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGTGG...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643313.1
CDS CCA 90 bp GATTTTGTTGATCATGTGTGCTCCCCACTAGTCTGTCACCCTCTTTaGATTCAAGCCCTTACCCTTATTTCCTCACCTGTGATGCGCTCC +
Preference number: 5 (lower is better)
Translates to: DFVDHVCSPLVCHPL*IQALTLISSPVMRS
Trigger: GGAGCGCATCACAGGTGAGGAAATAAGGGTAAGGGCTTGAATCCAAAGAGGGTGACAGACTAGTGGGGAGCACACATGATCAACAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 90 bp TTATATTCCACTGGCATAGATATAGGTCGTAGCTTGCCCTCAATGTaGGTGGCACCATCCAACTGGCTGTCAGCATGGCTAGAAACAGCA +
Preference number: 5 (lower is better)
Translates to: LYSTGIDIGRSLPSM*VAPSNWLSAWLETA
Trigger: TGCTGTTTCTAGCCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACGACCTATATCTATGCCAGTGGAATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS-3UTR CAA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAACGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCACCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAGCTAAGGGGAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GLPPFPFSTCILSLSAKGSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...CCCCTTAGCTGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCCCCCCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: AMVEPAISRQSKTSRLAPLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...GGGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: DEAILVACKRLMLSLRRTEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLASVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCCTTTGGGAGGGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: KARILLKSGLPLLYPFGRVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...CCTCCCAAAGGGATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCAGATCCCTTATGCACTGGCTTGCCCACCATATGTCCTCTGAGGTCTTCACAAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: SDPLCTGLPTICPLRSSQVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...TTGTGAAGACCTCAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGGATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTGCAAGAGGTTGATGTaGAGTCTGCGCCGTACCGAC +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHCKRLM*SLRRTD
Trigger: GTCGGTACGGCGCAGACTCAACATCAACCTCTTGCA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCGAGGGAGGTCGTGGCTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AMFCFHIRTGATHRGRSWLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...CCACGACCTCCCTCGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGGCAGCCTTTGAGGAGTaGGATCTTCAATGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQAAFEE*DLQWWG
Trigger: TCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTGCAGCCTTTGAGGAGTaGGATCTTCAATGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLAAFEE*DLQWWG
Trigger: TCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS TCA 90 bp CCAGGTGAGCAGACTGTGAAACCAGAGGATCTGACGACAGGGATATaGTGTGGTCACAGACTCCAGAAAGAGTTTTACACACGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGEQTVKPEDLTTGI*CGHRLQKEFYTREE
Trigger: TTCTTCACGTGTGTAAAACTCTTTCTGGAGTCTGTGACCACATCATATCCCTGTCGTCAGATCCTCTGGTTTCACAGTCTGCTCACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 27 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644075.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFSWCQENTTEVLPHRALPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLANPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCATATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ANRSGSDLAWRGSTNSRSYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...ACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: VTGTNWSIQTAMVEPAISQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...CGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGCACTGCTCCCAGTTACTTCCTGGCGAAACTCCTCATGAGAAGACTGAGACTCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: LHCSQLLPGETPHEKTETQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...AGTCTCAGTCTTCTCATGAGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCACAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: LFSWCQENTTEVLPHRALSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTGGTACATATTTCGGAAGGGATCTGTGATCTTGTAAAATTGGACAATGATATCCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LVHISEGICDLVKLDNDILHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...GATATCATTGTCCAATTTTACAAGATCACAGATCCCTTCCGAAATATGTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAACCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPEPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTAAGGGGTATGGCCCATAGTGATCCTGCAGGTGGCATTTCTGAGTTGGCAGGGCATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: LRGMAHSDPAGGISELAGHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...CCCTGCCAACTCAGAAATGCCACCTGCAGGATCACTATGGGCCATACCCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATT +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRSDGKT*VSLALI
Trigger: AATCAATGCTAAGGACACCAAGGTTTTGCCATCTGA...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATT +
Preference number: 5 (lower is better)
Translates to: DEAILVACKRLMLSLRRTSDGKT*VSLALI
Trigger: AATCAATGCTAAGGACACCAAGGTTTTGCCATCTGA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTCCTTGTGGAAACAGTaGTTCCTTCTGCAATACAGC +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSSLWKQ*FLLQYS
Trigger: GCTGTATTGCAGAAGGAACAACTGTTTCCACAAGGA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS TCA 90 bp CCCTACTCAAGTAGGCCCCAGTGTCTGTTCCCTTCTTTGTGTGCATaGGTTCTCATTATTCAGTTCTCACATATGAGTGAGAACACGTGG +
Preference number: 5 (lower is better)
Translates to: PYSSRPQCLFPSLCA*VLIIQFSHMSENTW
Trigger: CCACGTGTTCTCACTCATATGTGAGAACTGAATAATGAGAACTCATGCACACAAAGAAGGGAACAGACACTGGGGCCTACTTGAGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCGGAGAAAGCGGCTTTaGTGTGTCGGGTCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDRRKRL*CVGSRG
Trigger: GCCGCGAGACCCGACACACAAAAGCCGCTTTCTCCG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTACATTTACATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: QTTIQATARKRGQSRLHLHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...TAAATGTAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAACAATATTCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EQYSPVVLGLKEQESEDRRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...TCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGAATATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGGGAGGTCGTGGGTATGTATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: REVVGMYHMGVEGYLVLVLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...CACCAAAACAAGATAGCCCTCCACCCCCATATGATACATACCCACGACCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643156.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGGCGAAACTCCTCATGAGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LAKLLMRRLRLRSLRGGKLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...CTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCTCATGAGGAGTTTCGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: SAMFCFHIRTGATHLPTCLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...ACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TGCACGTCATCCTGTGGGTCACAGGCACTAACTGGAGCATTCAGACAGCAATGGTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CTSSCGSQALTGAFRQQWYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...CCATTGCTGTCTGAATGCTCCAGTTAGTGCCTGTGACCCACAGGATGACGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AAACTTCGAGGCTTGCCCCCATTTCCATTTAGCACTTGCATCCTCTCACTCTCAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: KLRGLPPFPFSTCILSLSSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TGAGAGTGAGAGGATGCAAGTGCTAAATGGAAATGGGGGCAAGCCTCGAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAAGACTGAGACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: RRLRLRSLRGGKSAMFCFSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...GAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGTCTCAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEALHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTCCACCTCTGGGGGTaGCACGTCATCCTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLHLWG*HVILWV
Trigger: GACCCACAGGATGACGTGCAACCCCCAGAGGTGGAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPECESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: DEAILVACKRLMLSLRRTLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: SANRSGSDLAWRGSTNSRKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...GCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCCCAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: NTTEVLPHRALSQLRPFPKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...GGGAAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR CAA 90 bp AGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGCTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RQQWLNPLSRGRVKLRGLLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAGCTAGTCTTCCCGTCAACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTTGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: RASLPVNCLLFTGHNLATCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...AGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTTGACGGGAAGACTAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: KSPWRKVGYVLLPHKDWRNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...GCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp AGGGAGGTCGTGGGTATGTATCATATGGGGGTGGAGGGCTATCTTGTTTTGGTGTGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: REVVGMYHMGVEGYLVLVWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...CACCAAAACAAGATAGCCCTCCACCCCCATATGATACATACCCACGACCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: PTEVDPIWHGEVLPTLAVLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...CACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATT +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSSDGKT*VSLALI
Trigger: AATCAATGCTAAGGACACCAAGGTTTTGCCATCTGA...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCACTGAAATCAAGTACTaGTGTCTGTCAATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PLFSWCQENTTEVLPHRATEIKY*CLSIPS
Trigger: GGAAGGAATTGACAGACACAAGTACTTGATTTCAGT...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGACTGAAATCAAGTACTaGTGTCTGTCAATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: ECQQKWIRFGMERFYQLSTEIKY*CLSIPS
Trigger: GGAAGGAATTGACAGACACAAGTACTTGATTTCAGT...CGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS CCA 90 bp GATTTACATTCCTCTGGGTATATACCCTGTAATGGGACTGCTGGGTaGAATGGTAGTTCTGCTTTTAGCTCTTTGAGGTACTGCCACACT +
Preference number: 5 (lower is better)
Translates to: DLHSSGYIPCNGTAG*NGSSAFSSLRYCHT
Trigger: AGTGTGGCAGTACCTCAAAGAGCTAAAAGCAGAACTACCATTCCACCCAGCAGTCCCATTACAGGGTATATACCCAGAGGAATGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TCGGCTATGTTTTGCTTCCACATAAGGACTGGCGCAACTCATCTTCCCACATGTAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: SAMFCFHIRTGATHLPTCNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...ACATGTGGGAAGATGAGTTGCGCCAGTCCTTATGTGGAAGCAAAACATAGCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLADPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000279451.9
ENST00000642501.1
ENST00000643220.1
ENST00000645791.1
CDS-3UTR CAA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VECQQKWIRFGMERFYQLLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...GAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: FSWCQENTTEVLPHRALSLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...GGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGACACTGCACTGCTCCCAGTTACTTCCTGGCGAAACTCCTCATGAGAAGACTGCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: RHCTAPSYFLAKLLMRRLPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...CAGTCTTCTCATGAGGAGTTTCGCCAGGAAGTAACTGGGAGCAGTGCAGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCTCTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: PLFSWCQENTTEVLPHRAPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...GGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAAGACAGAATCCTCCAGGGGCAGAGTCTGAAGATAGTGTAAGCCTGAACTTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: RRQNPPGAESEDSVSLNLQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...CAAGTTCAGGCTTACACTATCTTCAGACTCTGCCCCTGGAGGATTCTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QENTTEVLPHRALSQLRPYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...GGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GTCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VQWVECQQKWIRFGMERFYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...GAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGCGCCGTACCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: DEAILVACKRLMLSLRRTYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...GGTACGGCGCAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CQQKWIRFGMERFYQLSQYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...CTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GAATATGGAAGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: EYGSQSAGSQAGIHKGDSVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...ACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACTTCCATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTTGTGAGTCCAATGGGTaGAGTGCCAACAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSCESNG*SANRSG
Trigger: TCCACTTCTGTTGGCACTCAACCCATTGGACTCACA...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: LFSWCQENTTEVLPHRALLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379510.5
ENST00000644585.1
CDS-3UTR CAA 90 bp GGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: GAFRQQWLNPLSRGRVKLQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...AAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAAGATCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRRSVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGATCT...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAACTGAAATCAAGTACTaGTGTCTGTCAATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WVECQQKWIRFGMERFYQTEIKY*CLSIPS
Trigger: GGAAGGAATTGACAGACACAAGTACTTGATTTCAGT...TTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCAGATTCCAGCAGCCTTaGAGGAGTTGGATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLRFQQP*RSWIFN
Trigger: ATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATCT...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp ACTGTACAGACCACAATACAGGCAACAGCAAGAAAAAGAGGGCAGAGTAGGCTAAGATTCCAGCAGCCTTaGAGGAGTTGGATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: TVQTTIQATARKRGQSRLRFQQP*RSWIFN
Trigger: ATTGAAGATCCAACTCCTCAAAGGCTGCTGGAATCT...TAGCCTACTCTGCCCTCTTTTTCTTGCTGTTGCCTGTATTGTGGTCTGTACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CAA 90 bp TCTCCTGTTGTTCTGGGGTTGAAGGAACAAGAGAGTGAGGACAGAGTCCAAAATCAGAAACACTGCCTCTaGTGGTCTCAGTTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: SPVVLGLKEQESEDRVQNQKHCL*WSQFSV
Trigger: TACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTG...ATTTTGGACTCTGTCCTCACTCTCTTGTTCCTTCAACCCCAGAACAACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp GGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACATTATAAAACTGGGTTaGGGGAAGGCAGTTTGTTAT +
Preference number: 5 (lower is better)
Translates to: GLSANRSGSDLAWRGSTNIIKLG*GKAVCY
Trigger: ATAACAAACTGCCTTCCCCAAACCCAGTTTTATAAT...GTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTCTTTTCCTGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTGGACAATGATATCCTaGTGGAAACAGTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LFSWCQENTTEVLPHRALWTMIS*WKQLFL
Trigger: AAGGAACAACTGTTTCCACAAGGATATCATTGTCCA...AAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCAGGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAAACCAATTGGGCTCTaGAAGAATGAAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTKPIGL*KNEAND
Trigger: ATCATTGGCTTCATTCTTCAAGAGCCCAATTGGTTT...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGAAAGGTATTGTATTTaGGAGTGCTTACATTCCAGT +
Preference number: 5 (lower is better)
Translates to: VPTEVDPIWHGEVLPTLAERYCI*ECLHSS
Trigger: ACTGGAATGTAAGCACTCCAAAATACAATACCTTTC...TGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642501.1
CDS TCA 90 bp GTAATGGGACTGCTGGGTGGAATGGTAGTTCTGCTTTTAGCTCTTTaGGGTACTGCCACACTGCTTTCCACAATGGCTGAACTAATTTAT +
Preference number: 5 (lower is better)
Translates to: VMGLLGGMVVLLLAL*GTATLLSTMAELIY
Trigger: ATAAATTAGTTCAGCCATTGTGGAAAGCAGTGTGGCAGTACCTCAAAGAGCTAAAAGCAGAACTACCATTCCACCCAGCAGTCCCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS TCA 90 bp TTCCCACATTCAGAGGCTGCTTTGTCCACATCATTAGCTCTCTACTaGTGGATGGTGGTTTTGATAAACATGGTATCTCTTACCAGCCCT +
Preference number: 5 (lower is better)
Translates to: FPHSEAALSTSLALY*WMVVLINMVSLTSP
Trigger: AGGGCTGGTAAGAGATACCATGTTTATCAAAACCACCATCCATCAGTAGAGAGCTAATGATGTGGACAAAGCAGCCTCTGAATGTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS TCA 90 bp GAGAGCCTAGCACATGAGTGGTTCATCTATGAAGAGCCCTGCTTATaGGACATACACTCTGGACTTAAGGTTCTGATATACCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ESLAHEWFIYEEPCL*DIHSGLKVLIYPSL
Trigger: AAGACTTGGGTATATCAGAACCTTAAGTCCAGAGTGTATGTCTCATAAGCAGGGCTCTTCATAGATGAACCACTCATGTGCTAGGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS GCA 90 bp GAAAAAGAGAAGTTTCCCTCTTCACCAGTTTTATGTCCTTACCAATaGACACAGAAGGTCAACTGCTTCCAAGATCAGTTCCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: EKEKFPSSPVLCPYQ*TQKVNCFQDQFLMA
Trigger: GGCCATCAGGAACTGATCTTGGAAGCAGTTGACCTTCTGTGTGCATTGGTAAGGACATAAAACTGGTGAAGAGGGAAACTTCTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CCA 90 bp GATGGTGGTTTTGATAAACATGGTATCTCTTACCAGCCCTTCGCTTaGTTTAATGTTTGCCAGTTGAATCACTTCCAGGTGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: DGGFDKHGISYQPFA*FNVCQLNHFQVSRL
Trigger: CAGTCTGCTCACCTGGAAGTGATTCAACTGGCAAACATTAAACCAAGCGAAGGGCTGGTAAGAGATACCATGTTTATCAAAACCACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: SNGLSANRSGSDLAWRGSDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...AGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: NGLSANRSGSDLAWRGSTDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000643313.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ACTGAGAAGTCTCCGTGGAGGAAAGTCGGCTATGTTTTGCTTCCACATAAGGACGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: TEKSPWRKVGYVLLPHKDAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GTCCTTATGTGGAAGCAAAACATAGCCGACTTTCCTCCACGGAGACTTCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGAGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGTGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: WCQENTTEVLPHRALSQLPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTCGAGGCTTGTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RQQWLNPLSRGRVKLRGLYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...CAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPEKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPESVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCTTTTTCTTCCTGTACCTTAATGGACCCTTGTGTGCCCTACTTCAGAGACTTAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: CFFFLYLNGPLCALLQRLSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...AAGTCTCTGAAGTAGGGCACACAAGGGTCCATTAAGGTACAGGAAGAAAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGTTGCTTGCAAGAGGTaGATGTTGAGTCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQVACKR*MLSLRR
Trigger: ACGGCGCAGACTCAACATCAACCTCTTGCAAGCAAC...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTATTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: NRSGSDLAWRGSTNSRSVLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...TACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCATGGACTAGGGGAAAATaGGAAACTAAGTGGAAAGTT +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPWTRGK*ETKWKV
Trigger: AACTTTCCACTTAGTTTCCAATTTTCCCCTAGTCCA...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGAATGAGCCCAGAAGGTaGGGAAAGACTAAATCACAA +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLNEPRR*GKTKSQ
Trigger: TTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCATT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTAAACCAATTGGGCTCTaGAAGAATGAAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: LSANRSGSDLAWRGSTNSKPIGL*KNEAND
Trigger: ATCATTGGCTTCATTCTTCAAGAGCCCAATTGGTTT...AGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACCAACTCTCGCAGTGTAAAAATACCAGTTTGTaGGAATCTCTTGCACATTGC +
Preference number: 5 (lower is better)
Translates to: QQKWIRFGMERFYQLSQCKNTSL*ESLAHC
Trigger: GCAATGTGCAAGAGATTCCAACAAACTGGTATTTTT...ACACTGCGAGAGTTGGTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CAATGGGTTGAGTGCCAACAGAAGTGGATCCGATTTGGCATGGAGAGGTTCTACAGTGAGCATCATTATTaGTCTTTTTCAGGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: QWVECQQKWIRFGMERFYSEHHY*SFSGCL
Trigger: TAGGCAACCTGAAAAAGACAAATAATGATGCTCACT...GTAGAACCTCTCCATGCCAAATCGGATCCACTTCTGTTGGCACTCAACCCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTGT +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVIRLLL*PAIGPC
Trigger: ACAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR CAA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTCTTCTTCTCCTACCTaGGCCCCACTTAATCTTTCA +
Preference number: 5 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLSSSPT*APLNLS
Trigger: TGAAAGATTAAGTGGGGCCAAGGTAGGAGAAGAAGA...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS CCA 90 bp TCCAAAAGTAGAAATCAGGATTACCCAGGGCAATTCATAAGTGATTaGCTAGGCTATAGATTGAGGCGGTTTCAATCACCTGTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SKSRNQDYPGQFISD*LGYRLRRFQSPVKW
Trigger: CCACTTCACAGGTGATTGAAACCGCCTCAATCTATAGCCTAGCCAATCACTTATGAATTGCCCTGGGTAATCCTGATTTCTACTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 90 bp GATGCCATCCTTTTAAGTAGGTTTAGGTCGGCAGAGCCTTGTTCATaGGTCAAACTTCAAACGTCTAGACTGTATGTATGTAACACTGTC +
Preference number: 5 (lower is better)
Translates to: DAILLSRFRSAEPCS*VKLQTSRLYVCNTV
Trigger: GACAGTGTTACATACATACAGTCTAGACGTTTGAAGTTTGACCCATGAACAAGGCTCTGCCGACCTAAACCTACTTAAAAGGATGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS-3UTR CAA 90 bp AACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: NILFAAVYLLLDYPNLVIHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...AATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCCCTTATGCACTGGCTaGCCCACCATATGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAPLCTG*PTICPL
Trigger: CAGAGGACATATGGTGGGCAAGCCAGTGCATAAGGG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCCTCTTATATCCCTTTGGGAGGCCCCCAATCCAAAACACTTGATGATCTAAGCGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: PSYIPLGGPQSKTLDDLSDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...GCTTAGATCATCAAGTGTTTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRISAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYILCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTCAGGAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: CQENTTEVLPHRALSQLRPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTCCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGAATAGCTCATGCCTGCCCTAAGAGGCAACACCACTTGTATACAAGTGCCAAGCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: RIAHACPKRQHHLYTSAKPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...CTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAGGGCAGGCATGAGCTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: SAGSQAGIHKGDSLKPKLIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...TAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAACAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPEQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTGATGTTGAGTCTGCGCCGTACCGACTCTCTCCGATCTAAATTCTCTAAACATCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: LMLSLRRTDSLRSKFSKHQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...ATGTTTAGAGAATTTAGATCGGAGAGAGTCGGTACGGCGCAGACTCAACATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: ESEDSVSLNLSVASQLNPLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...AGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGGAGCATTCAGACAGCAATGGTTGAACCCGCTATCTCGAGGCAGAGTAAAACTTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WSIQTAMVEPAISRQSKTYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...AGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAATGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643156.1
ENST00000643171.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAGAAGTGGATCCGATTaGGCATGGAGAGGTTCTACC +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKRSGSD*AWRGST
Trigger: GGTAGAACCTCTCCATGCCAAATCGGATCCACTTCT...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: SAGSQAGIHKGDSLKPKLGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...TAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: IHNLLSLLCLKEATKESIVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543067.6
ENST00000642359.1
ENST00000644095.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGTAGCTTGCCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLVACHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGGCAAGCTAC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCAAGCTTGTATTCCATCTaGGTTGAAATACGATGTTCT +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPSLYSI*VEIRCS
Trigger: AGAACATCGTATTTCAACCAAGATGGAATACAAGCT...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AACTGCTTGCTGTTTACAGGCCACAACCTGGCCACTGTAAACATGACACATCCACATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: NCLLFTGHNLATVNMTHPHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...TGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCCTGTAAACAGCAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGTACTCAGTGGGTCATTaGAGGTGGTATTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVYSVGH*RWYFDR
Trigger: TCTGTCAAAATACCACCTCAAATGACCCACTGAGTA...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAATCATGAGGGCAGAGTaGCTGCATCAAACTATGCCG +
Preference number: 5 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPIMRAE*LHQTMP
Trigger: CGGCATAGTTTGATGCAGCAACTCTGCCCTCATGAT...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGCTGCCATCCTTAGTCTaGCTCAACAATGTTTATCAT +
Preference number: 5 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQLPSLV*LNNVYH
Trigger: ATGATAAACATTGTTGAGCAAGACTAAGGATGGCAG...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp GCAGCCTTTGAGGAGTTGGATCTTCAATGGTGGGGAAGACATGTAATAAGACTCCTGCCATCCTTAGTCTaGCTCAACAATGTTTATCAT +
Preference number: 5 (lower is better)
Translates to: AAFEELDLQWWGRHVIRLLPSLV*LNNVYH
Trigger: ATGATAAACATTGTTGAGCAAGACTAAGGATGGCAG...GAGTCTTATTACATGTCTTCCCCACCATTGAAGATCCAACTCCTCAAAGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AGTATGCCAAGAAGGAGGATTCCAATTGGTCCAACTGTTGTAGCAGGTAAAAGACAGAAACACTGCCTCTaGTGGTCTCAGTTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: SMPRRRIPIGPTVVAGKRQKHCL*WSQFSV
Trigger: TACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTG...TCTTTTACCTGCTACAACAGTTGGACCAATTGGAATCCTCCTTCTTGGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CAA 90 bp GAGAACACAACTGAGGTGTTACCACACAGAGCCCTTTCCCAGTTAAGACCCTTTCAAGAAATTCGTCTTTaGCTCTTGCCTTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ENTTEVLPHRALSQLRPFQEIRL*LLPLFF
Trigger: GAAAAACAAAGGCAAGAGCAAAAGACGAATTTCTTG...AAAGGGTCTTAACTGGGAAAGGGCTCTGTGTGGTAACACCTCAGTTGTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643220.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACATCCAGTCCACTACTaGACTCGGAGACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKHPVHY*TRRPFA
Trigger: AGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRRSESR*AIFGWS
Trigger: GGACCAGCCGAAAATTGCCAAACGACTTTCTGACCT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACCAGCATGGATTTTCTaGCACCGATCTGCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRPAWIF*HRSAGE
Trigger: TTCACCTGCAGATCGGTGCAAGAAAATCCATGCTGG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRILTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCCCAATGTAGAAAGCTCGCATTCTTCTTAAGAGTGGCCTGCCCCTCTTATATCTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SQCRKLAFFLRVACPSYIYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...GATATAAGAGGGGCAGGCCACTCTTAAGAAGAATGCGAGCTTTCTACATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTACTCTAGTATCCACCCCATTTTCACATCCCTGCAATGACAATGTTGAAGGAGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: FTLVSTPFSHPCNDNVEGEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...TCCTTCAACATTGTCATTGCAGGGATGTGAAAATGGGGTGGATACTAGAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRISVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTTCAGACAGCAATGGTaGAACCCGCTATCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDFRQQW*NPLSRG
Trigger: GCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGGGCCATTTTAGTTGCTaGCAAGAGGTTGATGTTGAG +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRGHFSC*QEVDVE
Trigger: CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCC...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCCCTCTTATATCCCTTaGGGAGGCCCCCAATCCAAA +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAPSYIP*GGPQSK
Trigger: TTTGGATTGGGGGCCTCCCAAAGGGATATAAGAGGG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCCTTTAAAGTGCTTTaGAGAATTCTCAGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAFKVL*RILSRC
Trigger: ACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GAGTCTGAAGATAGTGTAAGCCTGAACTTGTCAGTGGCGTCTCAATTAAATCCTTACTCAGTGGGTCATTaGAGGTGGTATTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: ESEDSVSLNLSVASQLNPYSVGH*RWYFDR
Trigger: TCTGTCAAAATACCACCTCAAATGACCCACTGAGTA...AGGATTTAATTGAGACGCCACTGACAAGTTCAGGCTTACACTATCTTCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ACATGTGTGTTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGATGTTGGCTTCTCCTTaGAACAATATTCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: TCVFTGIRCGVHQKHCLLMLASP*NNILLL
Trigger: CAACAGGAGAATATTGTTCAAAGGAGAAGCCAACAT...CAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAACACACATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp GATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGTTTTCAGTATCTTGACAATATCATGGTATaGATTCCACTCAATGACTCA +
Preference number: 5 (lower is better)
Translates to: DVGYTRNTASCGLSFQYLDNIMV*IPLNDS
Trigger: TGAGTCATTGAGTGGAATCAATACCATGATATTGTC...AAGATACTGAAAACTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGAGAGACATTCATTCTaGTACAGCTGCAGAGTGCTT +
Preference number: 5 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALERHSF*YSCRVL
Trigger: AAGCACTCTGCAGCTGTACAAGAATGAATGTCTCTC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGTCTGAAAAATACCAGTTTGTaGGAATCTCTTGCACATTGC +
Preference number: 5 (lower is better)
Translates to: NSKDEAILVACKRLMLSLKNTSL*ESLAHC
Trigger: GCAATGTGCAAGAGATTCCAACAAACTGGTATTTTT...CAGACTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATTTCGCACAAGGGGGTaGTGCTCTTCTAAACCACAC +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRFRTRG*CSSKPH
Trigger: GTGTGGTTTAGAAGAGCACAACCCCCTTGTGCGAAA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR CAA 90 bp TTTACAGGAATAAGATGTGGGGTACACCAGAAACACTGCCTCTTGTGGTCTCAGCTACATATACCTTATTaGCAGGATTATTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: FTGIRCGVHQKHCLLWSQLHIPY*QDYCMD
Trigger: GTCCATGCAATAATCCTGCAAATAAGGTATATGTAG...CTGAGACCACAAGAGGCAGTGTTTCTGGTGTACCCCACATCTTATTCCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS TCA 90 bp CACGTACTGGAAATCTTTATCTTTCTTCTGTGCAGTTCTCCTTGCTaGCTATTTCATAAAGTATGCCAACAGGCAGGTTCCCCTATTTTC +
Preference number: 5 (lower is better)
Translates to: HVLEIFIFLLCSSPC*LFHKVCQQAGSPIF
Trigger: GAAAATAGGGGAACCTGCCTGTTGGCATACTTTATGAAATAGTCAGCAAGGAGAACTGCACAGAAGAAAGATAAAGATTTCCAGTACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS GCA 90 bp TTCTCACATATGAGTGAGAACACGTGGTATTTGGTTTTCTGTTCCTaGATTTATTTGCAAAGGATAATAGCCTCCAGCTCCATCCACGTT +
Preference number: 5 (lower is better)
Translates to: FSHMSENTWYLVFCS*IYLQRIIASSSIHV
Trigger: AACGTGGATGGAGCTGGAGGCTATTATCCTTTGCAAATAAATGCAGGAACAGAAAACCAAATACCACGTGTTCTCACTCATATGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS GCA 90 bp CCAACTTTTTGTCTGGCAAACATCTCATCATCCTGCAAGACCAAATaGATATCTTACCTACACTTCCTGAATCCCTCAGAAGTGTTCATT +
Preference number: 5 (lower is better)
Translates to: PTFCLANISSSCKTK*ISYLHFLNPSEVFI
Trigger: AATGAACACTTCTGAGGGATTCAGGAAGTGTAGGTAAGATATGCATTTGGTCTTGCAGGATGATGAGATGTTTGCCAGACAAAAAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: IHNLLSLLCLKEATKESIPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp ATTAATCTCTGTAGTCCAGCAACATGTGTGTTTACAGGAATAAGATGTGGGGTACCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: INLCSPATCVFTGIRCGVPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...TACCCCACATCTTATTCCTGTAAACACACATGTTGCTGGACTACAGAGATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRINPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGTTGATGTTGAGGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: YKQQGRGHFSCLQEVDVEAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...CTCAACATCAACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGTGCCCATGATGTCTaGTCTCAGTGCATCCATTTG +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKSAHDV*SQCIHL
Trigger: CAAATGGATGCACTGAGACAAGACATCATGGGCACT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSLLCLKEATKESIKQPEYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...TTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: IHNLLSLLCLKEATKESIKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AGTCAAAGTGCTGGCTCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: SQSAGSQAGIHKGDSLKPKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...TGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGAGCCAGCACTTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACTCTCCTGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGAGCTTGTATTCCATCTaGGTTGAAATACGATGTTCT +
Preference number: 5 (lower is better)
Translates to: PLSCTVVQSLQNDSDSMVSLYSI*VEIRCS
Trigger: AGAACATCGTATTTCAACCAAGATGGAATACAAGCT...CACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCATATCCTGCAGTCAGCATATTAATTCTGTTAAGCCACCTGTTCATATCATCGCCTTTAAAGTGCTTTaGAGAATTCTCAGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: CISCSQHINSVKPPVHIIAFKVL*RILSRC
Trigger: ACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGGC...GATGATATGAACAGGTGGCTTAACAGAATTAATATGCTGACTGCAGGATATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATACTCAGTGGGTCATTaGAGGTGGTATTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIYSVGH*RWYFDR
Trigger: TCTGTCAAAATACCACCTCAAATGACCCACTGAGTA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATACAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACACTCTCCTGTACAGTaGTGCAAAGTCTGCAAAACG +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKHSPVQ*CKVCKT
Trigger: CGTTTTGCAGACTTTGCACAACTGTACAGGAGAGTG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTTTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LLCLKEATKESIKQPEFSLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...AGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCTCAGATGGCAAAACCTaGGTGTCCTTAGCATTGATT +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPSDGKT*VSLALI
Trigger: AATCAATGCTAAGGACACCAAGGTTTTGCCATCTGA...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS TCA 90 bp TATCCAGTTTATCAGCAGGAGAACAAATCAGTTACCTTTTGCCTATaGGACATGTTCTGTCCTAACATTGGAAGAACACCTTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: YPVYQQENKSVTFCL*DMFCPNIGRTPSVD
Trigger: ATCCACAGAAGGTGTTCTTCCAATGTTAGGACAGAACATGTCTCATAGGCAAAAGGTAACTGATTTGTTCTCCTGCTGATAAACTGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS TCA 90 bp TTGTTGGCTAATACTACTACAACGAGCAAAGCCATGATTCAGCAATaGAGGAGAAATAAAGTCTTTCCCAGACAAGAAAAGACTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLANTTTTSKAMIQQ*RRNKVFPRQEKTEG
Trigger: TCCCTCAGTCTTTTCTTGTCTGGGAAAGACTTTATTTCTCCTTCATTGCTGAATCATGGCTTTGCTCGTTGTAGTAGTATTAGCCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS GCA 90 bp TTATATCCAAATACCATACTATTTTATATAAGGGACATGAGCATTTaGAGAGTTTGGTATCTGTGGGGGTTCCTGGAACCAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LYPNTILFYIRDMSI*RVWYLWGFLEPISL
Trigger: GAGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGTATGGTATTTGGATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS GCA 90 bp GATAACTTTTCTCCAACTTTTTGTCTGGCAAACATCTCATCATCCTaGAAGACCAAATGCATATCTTACCTACACTTCCTGAATCCCTCA +
Preference number: 5 (lower is better)
Translates to: DNFSPTFCLANISSS*KTKCISYLHFLNPS
Trigger: TGAGGGATTCAGGAAGTGTAGGTAAGATATGCATTTGGTCTTGCAGGATGATGAGATGTTTGCCAGACAAAAAGTTGGAGAAAAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CCA 90 bp AATACCATACTATTTTATATAAGGGACATGAGCATTTGCAGAGTTTaGTATCTGTGGGGGTTCCTGGAACCAATCTCCCTCAACTGTATA +
Preference number: 5 (lower is better)
Translates to: NTILFYIRDMSICRV*YLWGFLEPISLNCI
Trigger: TATACAGTTGAGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGTATGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPNPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAATTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTATTTGCTGCAGTCTATCTTCTTCTTGACTATCCCAACCTGGTTATTTTCCATTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LFAAVYLLLDYPNLVIFHFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...ATGGAAAATAACCAGGTTGGGATAGTCAAGAAGAAGATAGACTGCAGCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCATTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: IPETVFSMDRIFRTLCTPFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...TGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: IHNLLSLLCLKEATKESISLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CCACACTCTCTATCCATTCTGATTATGTTGGCTTCTCCTTTGAACAATATTCTCAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PHSLSILIMLASPLNNILSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...GAGAATATTGTTCAAAGGAGAAGCCAACATAATCAGAATGGATAGAGAGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425654.7
ENST00000645245.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCACCAAAGAGTCCATTTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: IHNLLSLLCLKEATKESIYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...AATGGACTCTTTGGTGGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTTG +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDIRLLL*PAIGPL
Trigger: CAAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAAT...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGA +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLQEIRL*LLPAIG
Trigger: TCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCTCACTCCAGTAATCTaGTTCCTGCTTAATCCTCTC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADLTPVI*FLLNPL
Trigger: GAGAGGATTAAGCAGGAACAAGATTACTGGAGTGAG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAAGTGTAAGCCTGAACTaGTCAGTGGCGTCTCAATTA +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRSVSLN*SVASQL
Trigger: TAATTGAGACGCCACTGACAAGTTCAGGCTTACACT...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGTAAAACTTCGAGGCTaGCCCCCATTTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDVKLRG*PPFPFS
Trigger: GCTAAATGGAAATGGGGGCAAGCCTCGAAGTTTTAC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAAAAGAGGCAACACCACTaGTATACAAGTGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQKRQHH*YTSAKK
Trigger: TTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTT...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGCCTTTAAAGTGCTTTaGAGAATTCTCAGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADAFKVL*RILSRC
Trigger: ACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGGC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCCTTTAAAGTGCTTTaGAGAATTCTCAGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKAFKVL*RILSRC
Trigger: ACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp GGCCACAACCTGGCCACTGTAAACATGACACATCCATCAGGTACATATATTTTTCATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: GHNLATVNMTHPSGTYIFHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...AAAAATATATGTACCTGATGGATGTGTCATGTTTACAGTGGCCAGGTTGTGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644585.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTACTCAGTGGGTCATTaGAGGTGGTATTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLYSVGH*RWYFDR
Trigger: TCTGTCAAAATACCACCTCAAATGACCCACTGAGTA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATACTCAGTGGGTCATTaGAGGTGGTATTTTGACAGA +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQYSVGH*RWYFDR
Trigger: TCTGTCAAAATACCACCTCAAATGACCCACTGAGTA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCGATGCTCTTCTATTTaGCTTAGCTCTTGTATGCGC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADRCSSI*LSSCMR
Trigger: GCGCATACAAGAGCTAAGCAAAATAGAAGAGCATCG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATATGACCATCACCTGCTaGCTCCTTAGAAGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDMTITC*LLRREV
Trigger: TACTTCCCTTCTAAGGAGCAAGCAGGTGATGGTCAT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACAATGAGCCCAGAAGGTaGGGAAAGACTAAATCACAA +
Preference number: 5 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHNEPRR*GKTKSQ
Trigger: TTGTGATTTAGTCTTTCCCAACCTTCTGGGCTCATT...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS TCA 90 bp TGTATACTGATGAGGGCTGAAATGTTCTCACTGGATATAGCAATGTaGAAGTCACTAGTGATATTCCTGAGAGTTGTTTTCACAGTGATG +
Preference number: 5 (lower is better)
Translates to: CILMRAEMFSLDIAM*KSLVIFLRVVFTVM
Trigger: CATCACTGTGAAAACAACTCTCAGGAATATCACTAGTGACTTTCACATTGCTATATCCAGTGAGAACATTTCAGCCCTCATCAGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCCCTGTTGCACAATTGTaGTTAACTCCAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAPVAQL*LTPGRV
Trigger: AACTCTGCCTGGAGTTAACAACAATTGTGCAACAGG...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATAGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ACAGTATTTACGACAAGTAGTTCAGATGGCAAAACCTTGGTGTCCTTAGCATTGGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: TVFTTSSSDGKTLVSLALDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...CAATGCTAAGGACACCAAGGTTTTGCCATCTGAACTACTTGTCGTAAATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGAGAGTTTTCATAAGTaGGGGTGCTTTCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDESFHK*GCFLVF
Trigger: GAAGACGAGAAAGCACCCCAACTTATGAAAACTCTC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425654.7
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGATATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAAGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CCACCAAAGAGTCCATTAAACAGCCAGAATTTTCTAGTTATTGAAGCTGATCCCCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: PPKSPLNSQNFLVIEADPPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...GGGATCAGCTTCAATAACTAGAAAATTCTGGCTGTTTAATGGACTCTTTGGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CTAAGAGGCAACACCACTTGTATACAAGTGCCAAGAAATAAGGAGAAAGTTAGGCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: LRGNTTCIQVPRNKEKVRPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...CCTAACTTTCTCCTTATTTCTTGGCACTTGTATACAAGTGGTGTTGCCTCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDPRPRS*QEIRLL
Trigger: CAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTATATACTTGTTCAGAGTACCAGCAGGTACTAGATGGTCTGAAGGCAGAATATATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LIYLFRVPAGTRWSEGRIYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...TATTCTGCCTTCAGACCATCTAGTACCTGCTGGTACTCTGAACAAGTATATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGAGGGCTATCTTGTTTaGGTGTTGATGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDEGYLV*VLMEYL
Trigger: CAGATACTCCATCAACACCAAAACAAGATAGCCCTC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAAAGTCGGCTATGTTTaGCTTCCACATAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDKVGYV*LPHKDW
Trigger: CCAGTCCTTATGTGGAAGCAAAACATAGCCGACTTT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAATTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: FLQVFTLCNTTHCGDRKKLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...TTTCTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGAAAGCAGTCTCTGTGTaGCACCTGAATACACTTTAT +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKKAVSV*HLNTLY
Trigger: ATAAAGTGTATTCAGGTGCAACACAGAGACTGCTTT...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379510.5
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGCCTTTAAAGTGCTTTaGAGAATTCTCAGCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDAFKVL*RILSRC
Trigger: ACACCGGCTGAGAATTCTCAAAAGCACTTTAAAGGC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACAATGTGACATCTCTTaGAATGACCATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKQCDIS*NDHHLL
Trigger: AAGCAGGTGATGGTCATTCAAAGAGATGTCACATTG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTTGGTGTCCTTAGCATaGATTTATTGCCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHLVSLA*IYCPKE
Trigger: TTCTTTGGGGCAATAAATCAATGCTAAGGACACCAA...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTCCCGAGACTGTTTTTAGTATGGATAGAATCTTTAGAACCCTTTGCACACCAAATGTTGGCTTCTCCTTaGAACAATATTCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FPRLFLVWIESLEPFAHQMLASP*NNILLL
Trigger: CAACAGGAGAATATTGTTCAAAGGAGAAGCCAACAT...TTGGTGTGCAAAGGGTTCTAAAGATTCTATCCATACTAAAAACAGTCTCGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS-3UTR CAA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGGAGAGACATTCATTCTaGTACAGCTGCAGAGTGCTT +
Preference number: 5 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKERHSF*YSCRVL
Trigger: AAGCACTCTGCAGCTGTACAAGAATGAATGTCTCTC...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTCCTTGTGGAAACAGTaGTTCCTTCTGCAATACAGC +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEASLWKQ*FLLQYS
Trigger: GCTGTATTGCAGAAGGAACAACTGTTTCCACAAGGA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCAATCCTGTTGCACAATaGTTGTTAACTCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEANPVAQ*LLTPGR
Trigger: TCTGCCTGGAGTTAACAACAATTGTGCAACAGGATT...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCTTTAATGTTTGCCAGTaGAATCACTTCCAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAFNVCQ*NHFQVS
Trigger: GCTCACCTGGAAGTGATTCAACTGGCAAACATTAAA...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAGTCTGATGATTAACTaGAATCACTTCATCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDSLMIN*NHFIAS
Trigger: GCTGGCGATGAAGTGATTCAAGTTAATCATCAGACT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ATGTGCTTCACTGAAATCAAGTACTTGTGTCTGTCAATTCCTTCCTTACAACACGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: MCFTEIKYLCLSIPSLQHDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...GTGTTGTAAGGAAGGAATTGACAGACACAAGTACTTGATTTCAGTGAAGCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTATCACCCTTCTTTTTaGACTTCTTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDYHPSF*TSSLCP
Trigger: AGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGCCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AAGTCTGTTTTCTGTTATAAACAGCAAGGACGAGGCCATTTTAGTTGCTTGCAACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: KSVFCYKQQGRGHFSCLQPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645074.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTCTCTCTTCATCTTATTaGGATCTTCATAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATLSSSY*DLHSPP
Trigger: TGGGGGACTATGAAGATCCAAATAAGATGAAGAGAG...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp CTCTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGTGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: LLKMKVHSLSCTGNSIKLCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...CAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAGCAATGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: QLCKVCKTIVIQWWFQKQCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...TTGCTTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAAAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATACTGAAATCAAGTACTaGTGTCTGTCAATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDTEIKY*CLSIPS
Trigger: GGAAGGAATTGACAGACACAAGTACTTGATTTCAGT...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp ATATTTTTACAGGTATTCACATTATGCAATACCACACACTGCGGTGACAGGAAGATTATAAAACTGGGTTaGGGGAAGGCAGTTTGTTAT +
Preference number: 5 (lower is better)
Translates to: IFLQVFTLCNTTHCGDRKIIKLG*GKAVCY
Trigger: ATAACAAACTGCCTTCCCCAAACCCAGTTTTATAAT...CTTCCTGTCACCGCAGTGTGTGGTATTGCATAATGTGAATACCTGTAAAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS GCA 90 bp ACTGGCTCTATCAATTTTAAATTCAGGCAGGCTAATGAATCCTTCTaGTTTTTCATCCTGAAGAGCCAAGACTCTTGGTTAGTTTATTAT +
Preference number: 5 (lower is better)
Translates to: TGSINFKFRQANESF*FFILKSQDSWLVYY
Trigger: ATAATAAACTAACCAAGAGTCTTGGCTCTTCAGGATGAAAAAGCAGAAGGATTCATTAGCCTGCCTGAATTTAAAATTGATAGAGCCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647058.1
ENST00000647532.1
CDS CCA 90 bp GCTAATGAATCCTTCTGCTTTTTCATCCTGAAGAGCCAAGACTCTTaGTTAGTTTATTATATACAAAGGTGTGAAGGTAATGATACTCTG +
Preference number: 5 (lower is better)
Translates to: ANESFCFFILKSQDS*LVYYIQRCEGNDTL
Trigger: CAGAGTATCATTACCTTCACACCTTTGTATATAATAAACTAACCAAGAGTCTTGGCTCTTCAGGATGAAAAAGCAGAAGGATTCATTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647058.1
ENST00000647532.1
CDS CCA 90 bp TACCATGACTCACTTAAAGCCATAAGTCAATTTCAGAGCAAGAGCTaGAACCAAGTTTTCCCAAAGATCATTCTGTGTAGTTTTCAATAT +
Preference number: 5 (lower is better)
Translates to: YHDSLKAISQFQSKS*NQVFPKIILCSFQY
Trigger: ATATTGAAAACTACACAGAATGATCTTTGGGAAAACTTGGTTCCAGCTCTTGCTCTGAAATTGACTTATGGCTTTAAGTGAGTCATGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGAGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGCAAAATACACTTAATACATAATTTGCTTTCTCTGCTTTGCCTTAAAGAGGCCGCAATGAATAGTGAGTaGGGCTATTACTCTTATCAC +
Preference number: 5 (lower is better)
Translates to: CKIHLIHNLLSLLCLKEAAMNSE*GYYSYH
Trigger: GTGATAAGAGTAATAGCCCAACTCACTATTCATTGC...GGCCTCTTTAAGGCAAAGCAGAGAAAGCAAATTATGTATTAAGTGTATTTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279451.9
ENST00000543067.6
ENST00000642359.1
ENST00000642501.1
ENST00000643220.1
ENST00000644095.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGCTTTGTTTTTCTTCTTaGATTTGTGCTGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKLCFSS*ICAAVR
Trigger: CCTCACTGCAGCACAAATCAAAGAAGAAAAACAAAG...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTAGACCTGCTATAGGACCTTaGTTTTTCTTCTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: KMKVHSLSCTGNSIKLIRPAIGP*FFFFDL
Trigger: CAAATCAAAGAAGAAAAACAAAGGTCCTATAGCAGG...TCTAATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTTACTGTGCTCCATCTaGATTGGCTTTGATCTTATG +
Preference number: 5 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKLLCSI*IGFDLM
Trigger: CATAAGATCAAAGCCAATCAAGATGGAGCACAGTAA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642359.1
ENST00000642501.1
ENST00000645791.1
ENST00000646697.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAATGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATTGTATTCCATCTTGGTaGAAATACGATGTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADCIPSW*KYDVLL
Trigger: TAGGAGAACATCGTATTTCAACCAAGATGGAATACA...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AATTCTTTAGATGTCAAGTCTGGATTGTCTAGGACTTTATCGATAATGGCTACTGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 5 (lower is better)
Translates to: NSLDVKSGLSRTLSIMATDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...AGTAGCCATTATCGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643156.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGATGTCAAGTCTGGATaGTCTAGGACTTTATCGATA +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDDVKSG*SRTLSI
Trigger: TATCGATAAAGTCCTAGACAATCCAGACTTGACATC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TGTACAGTTGTGCAAAGTCTGCAAAACGATAGTGATTCAATGGTGGTTTCAAAACATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: CTVVQSLQNDSDSMVVSKHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...TTTTGAAACCACCATTGAATCACTATCGTTTTGCAGACTTTGCACAACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp CTTAAAGATGAAAGTACATTCACTGAGCTGTACAGGCAACAGTATAAAGCTGATCATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: LKDESTFTELYRQQYKADHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...ATCAGCTTTATACTGTTGCCTGTACAGCTCAGTGAATGTACTTTCATCTTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATAACTACCTTATATACTaGTTCAGAGTACCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDNYLIY*FRVPAG
Trigger: ACCTGCTGGTACTCTGAACAAGTATATAAGGTAGTT...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp AGTACTTGTGTCTGTCAATTCCTTCCTTACAACACTAAATATTGCTCCATAAAGTGGACAATGATATCCTaGTGGAAACAGTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: STCVCQFLPYNTKYCSIKWTMIS*WKQLFL
Trigger: AAGGAACAACTGTTTCCACAAGGATATCATTGTCCA...CTTTATGGAGCAATATTTAGTGTTGTAAGGAAGGAATTGACAGACACAAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TCTCAGGCAGGAATTCATAAAGGAGACAGTTTAAAACCAAAGCTAAGAGATGATAGTGAGCATCATTATTaGTCTTTTTCAGGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: SQAGIHKGDSLKPKLRDDSEHHY*SFSGCL
Trigger: TAGGCAACCTGAAAAAGACAAATAATGATGCTCACT...ATCATCTCTTAGCTTTGGTTTTAAACTGTCTCCTTTATGAATTCCTGCCTGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642501.1
ENST00000645791.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGCCTGCTATAGGACCTaGTATTATAATTGCACTGAA +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDACYRT*YYNCTE
Trigger: TTCAGTGCAATTATAATACAAGGTCCTATAGCAGGC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS-3UTR CAA 90 bp CTTGAAATTCACAAATTGCCATGTTTAAGTAGCTGTTCAGTGAAGATGCTGTTTGATATTTTAAAGAAATaGTCCAGATCCGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LEIHKLPCLSSCSVKMLFDILKK*SRSEGG
Trigger: ACCTCCCTCGGATCTGGACAATTTCTTTAAAATATC...AAACAGCATCTTCACTGAACAGCTACTTAAACATGGCAATTTGTGAATTTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643171.1
CDS TCA 90 bp TGTGTAGAGTACCCAGATGGCATTCAATCTGAAGTGGCATTTGAATaGATGAAAGGGGAAACATTGCAAATAGTTTTTAGATACCAATAT +
Preference number: 5 (lower is better)
Translates to: CVEYPDGIQSEVAFE*MKGETLQIVFRYQY
Trigger: ATATTGGTATCTAAAAACTATTTGCAATGTTTCCCCTTTCATTCATTCAAATGCCACTTCAGATTGAATGCCATCTGGGTACTCTACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATGATCCAGAAATGAATTaGGTGATTCAGATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDDPEMN*VIQIPY
Trigger: ATAAGGGATCTGAATCACCAAATTCATTTCTGGATC...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATTATCTTGTTTTGGTGTaGATGGAGTATCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDYLVLV*MEYLLL
Trigger: AAGAAGCAGATACTCCATCAACACCAAAACAAGATA...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp TTACAAAAACATCTTACAAAGCTTTGCCCTGATACACCAAGTGTTCTCATAGATCATCTGCTTCCATTGTaGGAATTCTTTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: LQKHLTKLCPDTPSVLIDHLLPL*EFFRCQ
Trigger: TTGACATCTAAAGAATTCCAACAATGGAAGCAGATG...ATCTATGAGAACACTTGGTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000643156.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
CDS-3UTR CAA 90 bp ACTAATCAATGTAGAACATCCTATTTGCTGCAGTCTATCTTCTTCTTGACTATCGACAATATCATGGTATaGATTCCACTCAATGACTCA +
Preference number: 5 (lower is better)
Translates to: TNQCRTSYLLQSIFFLTIDNIMV*IPLNDS
Trigger: TGAGTCATTGAGTGGAATCAATACCATGATATTGTC...GATAGTCAAGAAGAAGATAGACTGCAGCAAATAGGATGTTCTACATTGATTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1
CDS GCA 72 bp GGCGGCGGCGGCGGCGGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCCTCCGCCGCTCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: GGGGGGCCCCCC*CCCCCLRRSAP
Trigger: CGGAGCGGAGCGGCGGAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCGCC
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS CCA 72 bp CAGCAGCCCGAGCTGCTCTCAGGTGGGGTCCCTTGCTaGCCGCAGCCTCCCTGGGCGGGCGGCGCGGAGAAA +
Preference number: 6 (lower is better)
Translates to: QQPELLSGGVPC*PQPPWAGGAEK
Trigger: TTTCTCCGCGCCGCCCGCCCAGGGAGGCTGCGGCCAGCAAGGGACCCCACCTGAGAGCAGCTCGGGCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000645791.1
ENST00000646175.1
CDS GCA 72 bp GGTAAACGTGCAGGAGTCGTGGCTCCGCGCCGGGTCTaGTCAGTTCCCGCTAAGGCGGCGGCGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GKRAGVVAPRRV*SVPAKAAAAAA
Trigger: AGCCGCCGCCGCCGCCGCCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTTTACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS GCA 72 bp TTGCTGAGGGGTCGCGTCGCCGAGGGAAGCAGCCTCTaGCGCACGCCCTCAGCCAACTTGCCCGCTCGCCTC +
Preference number: 6 (lower is better)
Translates to: LLRGRVAEGSSL*RTPSANLPARL
Trigger: GAGGCGAGCGGGCAAGTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCTCGGCGACGCGACCCCTCAGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS GCA 72 bp AGGGAAGCAGCCTCTGCCGCACGCCCTCAGCCAACTTaGCCGCTCGCCTCACGCGCGGGAGTGAAGCCCCGA +
Preference number: 6 (lower is better)
Translates to: REAASAARPQPT*PLASRAGVKPR
Trigger: TCGGGGCTTCACTCCCGCGCGTGAGGCGAGCGGGCAAGTTGGCTGAGGGCGTGCGGCAGAGGCTGCTTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643841.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645679.1
CDS GCA 72 bp CTCACGCGCGGGAGTGAAGCCCCGAGCACGACTAGCTaGCCGGCGGAAATGACGAGGGGCCTCCTGCCACCC +
Preference number: 6 (lower is better)
Translates to: LTRGSEAPSTTS*PAEMTRGLLPP
Trigger: GGGTGGCAGGAGGCCCCTCGTCATTTCCGCCGGGCAGCTAGTCGTGCTCGGGGCTTCACTCCCGCGCGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642359.1
ENST00000643841.1
ENST00000645038.1
CDS CCA 72 bp AGGAACGGCGACAGGGAGGTAAACGTGCAGGAGTCGTaGCTCCGCGCCGGGTCTGCTCAGTTCCCGCTAAGG +
Preference number: 6 (lower is better)
Translates to: RNGDREVNVQES*LRAGSAQFPLR
Trigger: CCTTAGCGGGAACTGAGCAGACCCGGCGCGGAGCCACGACTCCTGCACGTTTACCTCCCTGTCGCCGTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS TCA 72 bp CCGGTCTCCGTCCCTAGGGAGCTTCAGTTCATAGCTTaGGTTGCTGAGGGGTCGCGTCGCCGAGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: PVSVPRELQFIA*VAEGSRRRGKQ
Trigger: CTGCTTCCCTCGGCGACGCGACCCCTCAGCAACTCAAGCTATGAACTGAAGCTCCCTAGGGACGGAGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000543067.6
ENST00000642359.1
ENST00000643171.1
ENST00000643841.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645245.1
ENST00000645679.1
ENST00000646175.1
CDS TCA 72 bp TGGCCAATGCGGCTGACCCCCAGATCTTCTAGCTCCTaGTGTGTAATGCGCAGCAGCTGGTCCCCACTGATC +
Preference number: 6 (lower is better)
Translates to: WPMRLTPRSSSS*CVMRSSWSPLI
Trigger: GATCAGTGGGGACCAGCTGCTGCGCATTACACATCAGGAGCTAGAAGATCTGGGGGTCAGCCGCATTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 27 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS CCA 72 bp GAGACCATTTGCTCACCGGTTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGTGCAGAGCGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ETICSPVPLSEP*VRGRFRAERRA
Trigger: AGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTGAGCAAATGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS TCA 72 bp AGTCTTGGCGGTCTCATCCTCAGGAGCAGCCTGCCCTaGATCCTCTCTCAGGGTGTACTGGCTATTCTGCAC +
Preference number: 6 (lower is better)
Translates to: SLGGLILRSSLP*ILSQGVLAILH
Trigger: GTGCAGAATAGCCAGTACACCCTGAGAGAGGATTCAGGGCAGGCTGCTCCTGAGGATGAGACCGCCAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CCA 72 bp CGTAGCTTGCCCTCAATGTGGGTGGCACCATCCAACTaGCTGTCAGCATGGCTAGAAACAGCAGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: RSLPSMWVAPSN*LSAWLETAGRR
Trigger: CCTTCTGCCTGCTGTTTCTAGCCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CAA 72 bp AAGACTCCCATAAAGGGAGTCTCCCTAGTGCCAGTCTaGGCGGTCTCATCCTCAGGAGCAGCCTGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: KTPIKGVSLVPV*AVSSSGAACPE
Trigger: TTCAGGGCAGGCTGCTCCTGAGGATGAGACCGCCAAGACTGGCACTAGGGAGACTCCCTTTATGGGAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS TCA 72 bp AAAGAACTCCCTGAGGCCAAGAGGTTTCCCCAGGGATaGCCCCAGTCCCTTCCTCTCTATTTGGCTCATGCC +
Preference number: 6 (lower is better)
Translates to: KELPEAKRFPQG*PQSLPLYLAHA
Trigger: GGCATGAGCCAAATAGAGAGGAAGGGACTGGGGTCATCCCTGGGGAAACCTCTTGGCCTCAGGGAGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS GCA 72 bp TCCATTATCAGAGCCATGGGTACGGGGTCGGTTCCGTaGAGAGCGCAGAGCTCAGACACAAAACGAACTCAG +
Preference number: 6 (lower is better)
Translates to: SIIRAMGTGSVP*RAQSSDTKRTQ
Trigger: CTGAGTTCGTTTTGTGTCTGAGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 25 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645679.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS CCA 72 bp AAACAGTCATCAAGACCGGTTCCATTATCAGAGCCATaGGTACGGGGTCGGTTCCGTGCAGAGCGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: KQSSRPVPLSEP*VRGRFRAERRA
Trigger: AGCTCTGCGCTCTGCACGGAACCGACCCCGTACCCATGGCTCTGATAATGGAACCGGTCTTGATGACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645679.1
CDS TCA 72 bp GCACACAGAAGGTCAACTGCTTCCAAGATCAGTTCCTaGTGGCCAATGCGGCTGACCCCCAGATCTTCTAGC +
Preference number: 6 (lower is better)
Translates to: AHRRSTASKISS*WPMRLTPRSSS
Trigger: GCTAGAAGATCTGGGGGTCAGCCGCATTGGCCATCAGGAACTGATCTTGGAAGCAGTTGACCTTCTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS CAA 90 bp TTTGGGACCTGGACTGAGCCACTACTGGCTTCCTTACTCCTCAGCTaGCAGACAGCCTATTGTGGGAGTTCACCTGGTGATCGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: FGTWTEPLLASLLLS*QTAYCGSSPGDRVS
Trigger: ACTCACACGATCACCAGGTGAACTCCCACAATAGGCTGTCTGCAAGCTGAGGAGTAAGGAAGCCAGTAGTGGCTCAGTCCAGGTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS TCA 72 bp TTGGCTTCTCCACTTTTGAGGCTTTGGGACCTGGACTaGGCCACTACTGGCTTCCTTACTCCTCAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: LASPLLRLWDLD*ATTGFLTPQLA
Trigger: TGCAAGCTGAGGAGTAAGGAAGCCAGTAGTGGCTCAGTCCAGGTCCCAAAGCCTCAAAAGTGGAGAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 72 bp TCAATGTGGGTGGCACCATCCAACTGGCTGTCAGCATaGCTAGAAACAGCAGGCAGAAGGAGGTGGAATAAG +
Preference number: 6 (lower is better)
Translates to: SMWVAPSNWLSA*LETAGRRRWNK
Trigger: CTTATTCCACCTCCTTCTGCCTGCTGTTTCTAGCCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 72 bp ACTGGCATAGATATAGGTCGTAGCTTGCCCTCAATGTaGGTGGCACCATCCAACTGGCTGTCAGCATGGCTA +
Preference number: 6 (lower is better)
Translates to: TGIDIGRSLPSM*VAPSNWLSAWL
Trigger: TAGCCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACGACCTATATCTATGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CAA 72 bp GCAAATGGTGACCTGTCCAACCAGGCAAGCAGACTCTaGGCTGCTCCAATCAGATCCACAACTGAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: ANGDLSNQASRL*AAPIRSTTEVR
Trigger: TCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCTGGTTGGACAGGTCACCATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS CAA 90 bp TCCCCCACCCAATTATATTCCACTGGCATAGATATAGGTCGTAGCTaGCCCTCAATGTGGGTGGCACCATCCAACTGGCTGTCAGCATGG +
Preference number: 6 (lower is better)
Translates to: SPTQLYSTGIDIGRS*PSMWVAPSNWLSAW
Trigger: CCATGCTGACAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACGACCTATATCTATGCCAGTGGAATATAATTGGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CAA 90 bp GTCACAGCAGCAAATGGTGACCTGTCCAACCAGGCAAGCAGACTCTaGGCTGCTCCAATCAGATCCACAACTGAGGTCAGAAAGTCGTTT +
Preference number: 6 (lower is better)
Translates to: VTAANGDLSNQASRL*AAPIRSTTEVRKSF
Trigger: AAACGACTTTCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCTGGTTGGACAGGTCACCATTTGCTGCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS GCA 72 bp CTTTCATCCAGTCCACTACTTGACTCGGAGACCATTTaGTCACCGGTTCCATTATCAGAGCCATGGGTACGG +
Preference number: 6 (lower is better)
Translates to: LSSSPLLDSETI*SPVPLSEPWVR
Trigger: CCGTACCCATGGCTCTGATAATGGAACCGGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS CCA 72 bp CAAATGGTGACCTGTCCAACCAGGCAAGCAGACTCTTaGCTGCTCCAATCAGATCCACAACTGAGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: QMVTCPTRQADS*LLQSDPQLRSE
Trigger: TTCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGAGTCTGCTTGCCTGGTTGGACAGGTCACCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS CAA 90 bp TCTTGGCTGCTCCAATCAGATCCACAACTGAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCCTCCCATCATAATGGCCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: SWLLQSDPQLRSESR*AIFGWSSHHNGHSF
Trigger: GAAGGAGTGGCCATTATGATGGGAGGACCAGCCGAAAATTGCCAAACGACTTTCTGACCTCAGTTGTGGATCTGATTGGAGCAGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS TCA 72 bp ACAGCAGGCAGAAGGAGGTGGAATAAGCTGGCTTGCTaGGTCTTTCGGCTTTCATCTTTCTCCCATGCTAGA +
Preference number: 6 (lower is better)
Translates to: TAGRRRWNKLAC*VFRLSSFSHAR
Trigger: TCTAGCATGGGAGAAAGATGAAAGCCGAAAGACTCAGCAAGCCAGCTTATTCCACCTCCTTCTGCCTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 72 bp GATCATGTGTGCTCCCCACTAGTCTGTCACCCTCTTTaGATTCAAGCCCTTACCCTTATTTCCTCACCTGTG +
Preference number: 6 (lower is better)
Translates to: DHVCSPLVCHPL*IQALTLISSPV
Trigger: CACAGGTGAGGAAATAAGGGTAAGGGCTTGAATCCAAAGAGGGTGACAGACTAGTGGGGAGCACACATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS TCA 72 bp CTGCTGGGTGGAATGGTAGTTCTGCTTTTAGCTCTTTaGGGTACTGCCACACTGCTTTCCACAATGGCTGAA +
Preference number: 6 (lower is better)
Translates to: LLGGMVVLLLAL*GTATLLSTMAE
Trigger: TTCAGCCATTGTGGAAAGCAGTGTGGCAGTACCTCAAAGAGCTAAAAGCAGAACTACCATTCCACCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS TCA 72 bp GCAAAGAGAAGCCAGACAGACTACGGGATTGAGCAGTaGCTGGGAAATGAGAAAGTGAAGGCCTTGCATGTA +
Preference number: 6 (lower is better)
Translates to: AKRSQTDYGIEQ*LGNEKVKALHV
Trigger: TACATGCAAGGCCTTCACTTTCTCATTTCCCAGTCACTGCTCAATCCCGTAGTCTGTCTGGCTTCTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS TCA 72 bp CAGCTTGCAGACAGCCTATTGTGGGAGTTCACCTGGTaGTCGTGTGAGTCAATTCTGCTTCATAAACTCCCT +
Preference number: 6 (lower is better)
Translates to: QLADSLLWEFTW*SCESILLHKLP
Trigger: AGGGAGTTTATGAAGCAGAATTGACTCACACGATCACCAGGTGAACTCCCACAATAGGCTGTCTGCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 72 bp CCTGCCCTTGAATCAGACTCCAGGTTCTTCAGCCTTTaGATTCTTGAACTTTTATCAGCGGTTTGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: PALESDSRFFSL*ILELLSAVCQW
Trigger: CCACTGGCAAACCGCTGATAAAAGTTCAAGAATCCAAAGGCTGAAGAACCTGGAGTCTGATTCAAGGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CCA 72 bp CCAACAGGAGCCAAAGCAACCTCTCAGTCAAGTTGGTaGAATAAGGCATATTTGGAGATGGTCCAAGTACCC +
Preference number: 6 (lower is better)
Translates to: PTGAKATSQSSW*NKAYLEMVQVP
Trigger: GGGTACTTGGACCATCTCCAAATATGCCTTATTCCACCAACTTGACTGAGAGGTTGCTTTGGCTCCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CAA 72 bp CTCCAATCAGATCCACAACTGAGGTCAGAAAGTCGTTaGGCAATTTTCGGCTGGTCCTCCCATCATAATGGC +
Preference number: 6 (lower is better)
Translates to: LQSDPQLRSESR*AIFGWSSHHNG
Trigger: GCCATTATGATGGGAGGACCAGCCGAAAATTGCCAAACGACTTTCTGACCTCAGTTGTGGATCTGATTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000479158.2
ENST00000480138.2
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642501.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644789.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000646697.1
ENST00000647423.1
ENST00000647532.1
CDS CAA 72 bp CAATTATATTCCACTGGCATAGATATAGGTCGTAGCTaGCCCTCAATGTGGGTGGCACCATCCAACTGGCTG +
Preference number: 6 (lower is better)
Translates to: QLYSTGIDIGRS*PSMWVAPSNWL
Trigger: CAGCCAGTTGGATGGTGCCACCCACATTGAGGGCAAGCTACGACCTATATCTATGCCAGTGGAATATAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CAA 90 bp TTCTTTTTCCAAAGCCAGCCCTCACAGTCACCACGGCCAAGATCTTaGCAAGAAATTCGTCTTTTGCTCTTGCCTGCTATAGGACCTTGT +
Preference number: 6 (lower is better)
Translates to: FFFQSQPSQSPRPRS*QEIRLLLLPAIGPC
Trigger: ACAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGACTGTGAGGGCTGGCTTTGGAAAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS TCA 72 bp TTCACAGTGATGGCAATAAGCCAGCATCGAATGGGTTaGGGAGTCTTCAAAGCAGTCAGGCTACGTAAGAGA +
Preference number: 6 (lower is better)
Translates to: FTVMAISQHRMG*GVFKAVRLRKR
Trigger: TCTCTTACGTAGCCTGACTGCTTTGAAGACTCCTCAACCCATTCGATGCTGGCTTATTGCCATCACTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 72 bp TCCTCTGGGTATATACCCTGTAATGGGACTGCTGGGTaGAATGGTAGTTCTGCTTTTAGCTCTTTGAGGTAC +
Preference number: 6 (lower is better)
Translates to: SSGYIPCNGTAG*NGSSAFSSLRY
Trigger: GTACCTCAAAGAGCTAAAAGCAGAACTACCATTCCACCCAGCAGTCCCATTACAGGGTATATACCCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS CAA 72 bp CTTTCATCTTTCTCCCATGCTAGATGGTTCCTGCCCTaGAATCAGACTCCAGGTTCTTCAGCCTTTGGATTC +
Preference number: 6 (lower is better)
Translates to: LSSFSHARWFLP*NQTPGSSAFGF
Trigger: GAATCCAAAGGCTGAAGAACCTGGAGTCTGATTCAAGGGCAGGAACCATCTAGCATGGGAGAAAGATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS TCA 72 bp AAACAGTCATCAAGACCTTTCATCCAGTCCACTACTTaGCTCGGAGACCATTTGCTCACCGGTTCCATTATC +
Preference number: 6 (lower is better)
Translates to: KQSSRPFIQSTT*LGDHLLTGSII
Trigger: GATAATGGAACCGGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTTGATGACTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS CCA 72 bp ATAAGGGACATGAGCATTTGCAGAGTTTGGTATCTGTaGGGGTTCCTGGAACCAATCTCCCTCAACTGTATA +
Preference number: 6 (lower is better)
Translates to: IRDMSICRVWYL*GFLEPISLNCI
Trigger: TATACAGTTGAGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CAA 72 bp CAAACAGTCATCAAGACCTTTCATCCAGTCCACTACTaGACTCGGAGACCATTTGCTCACCGGTTCCATTAT +
Preference number: 6 (lower is better)
Translates to: QTVIKTFHPVHY*TRRPFAHRFHY
Trigger: ATAATGGAACCGGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTTGATGACTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS CAA 72 bp TTGAATCAGACTCCAGGTTCTTCAGCCTTTGGATTCTaGAACTTTTATCAGCGGTTTGCCAGTGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: LNQTPGSSAFGF*NFYQRFASGSQ
Trigger: CTGAGAGCCACTGGCAAACCGCTGATAAAAGTTCAAGAATCCAAAGGCTGAAGAACCTGGAGTCTGATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642853.1
CDS CAA 90 bp CAGGATTACCCAGGGCAATTCATAAGTGATTGGCTAGGCTATAGATaGAGGCGGTTTCAATCACCTGTGAAGTGGCCTGATACAAATGAT +
Preference number: 6 (lower is better)
Translates to: QDYPGQFISDWLGYR*RRFQSPVKWPDTND
Trigger: ATCATTTGTATCAGGCCACTTCACAGGTGATTGAAACCGCCTCAATCTATAGCCTAGCCAATCACTTATGAATTGCCCTGGGTAATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 72 bp CTATTTTATATAAGGGACATGAGCATTTGCAGAGTTTaGTATCTGTGGGGGTTCCTGGAACCAATCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LFYIRDMSICRV*YLWGFLEPISL
Trigger: GAGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CAA 90 bp ATGAGTGAGAACACGTGGTATTTGGTTTTCTGTTCCTGCATTTATTaGCAAAGGATAATAGCCTCCAGCTCCATCCACGTTCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: MSENTWYLVFCSCIY*QRIIASSSIHVPPH
Trigger: ATGAGGAGGAACGTGGATGGAGCTGGAGGCTATTATCCTTTGCAAATAAATGCAGGAACAGAAAACCAAATACCACGTGTTCTCACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645038.1
CDS TCA 72 bp GCACATGAGTGGTTCATCTATGAAGAGCCCTGCTTATaGGACATACACTCTGGACTTAAGGTTCTGATATAC +
Preference number: 6 (lower is better)
Translates to: AHEWFIYEEPCL*DIHSGLKVLIY
Trigger: GTATATCAGAACCTTAAGTCCAGAGTGTATGTCTCATAAGCAGGGCTCTTCATAGATGAACCACTCATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS GCA 72 bp AAGTTTCCCTCTTCACCAGTTTTATGTCCTTACCAATaGACACAGAAGGTCAACTGCTTCCAAGATCAGTTC +
Preference number: 6 (lower is better)
Translates to: KFPSSPVLCPYQ*TQKVNCFQDQF
Trigger: GAACTGATCTTGGAAGCAGTTGACCTTCTGTGTGCATTGGTAAGGACATAAAACTGGTGAAGAGGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CCA 72 bp AGAAATCAGGATTACCCAGGGCAATTCATAAGTGATTaGCTAGGCTATAGATTGAGGCGGTTTCAATCACCT +
Preference number: 6 (lower is better)
Translates to: RNQDYPGQFISD*LGYRLRRFQSP
Trigger: AGGTGATTGAAACCGCCTCAATCTATAGCCTAGCCAATCACTTATGAATTGCCCTGGGTAATCCTGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 72 bp GTAACACTGTCAATCAATATTCTTTCCTTTCTCAACTaGCAGTGTGAGAGCCTAGCACATGAGTGGTTCATC +
Preference number: 6 (lower is better)
Translates to: VTLSINILSFLN*QCESLAHEWFI
Trigger: GATGAACCACTCATGTGCTAGGCTCTCACACTGCCAGTTGAGAAAGGAAAGAATATTGATTGACAGTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CAA 72 bp ACTATTTTATATAAGGGACATGAGCATTTGCAGAGTTaGGTATCTGTGGGGGTTCCTGGAACCAATCTCCCT +
Preference number: 6 (lower is better)
Translates to: TILYKGHEHLQS*VSVGVPGTNLP
Trigger: AGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CAA 90 bp ATGAGTGAGAACACGTGGTATTTGGTTTTCTGTTCCTGCATTTATTaGCAAAGGATAATAGCCTCCAGCTCCATCCACGTTCCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: MSENTWYLVFCSCIY*QRIIASSSIHVPAK
Trigger: TTTTGCAGGAACGTGGATGGAGCTGGAGGCTATTATCCTTTGCAAATAAATGCAGGAACAGAAAACCAAATACCACGTGTTCTCACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS TCA 72 bp TCAGAGGCTGCTTTGTCCACATCATTAGCTCTCTACTaGTGGATGGTGGTTTTGATAAACATGGTATCTCTT +
Preference number: 6 (lower is better)
Translates to: SEAALSTSLALY*WMVVLINMVSL
Trigger: AAGAGATACCATGTTTATCAAAACCACCATCCATCAGTAGAGAGCTAATGATGTGGACAAAGCAGCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS TCA 72 bp ATTGAGAAAGAAAATGAGTCAGTCCTAAAAGCAGTGTaGTTCCTGACAGGGTCTAGTATAAGGCCACAGATG +
Preference number: 6 (lower is better)
Translates to: IEKENESVLKAV*FLTGSSIRPQM
Trigger: CATCTGTGGCCTTATACTAGACCCTGTCAGGAATCACACTGCTTTTAGGACTGACTCATTTTCTTTCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS GCA 72 bp CTGATCTTCTCCCTCTCAAAGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCTTTCATCCAGTCCACT +
Preference number: 6 (lower is better)
Translates to: LIFSLSKFLIYC*KQSSRPFIQST
Trigger: AGTGGACTGGATGAAAGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000279451.9
ENST00000379510.5
ENST00000425654.7
ENST00000485012.2
ENST00000543067.6
ENST00000642359.1
ENST00000642460.1
ENST00000642565.1
ENST00000643171.1
ENST00000643220.1
ENST00000643309.1
ENST00000643841.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000644798.1
ENST00000644832.1
ENST00000645038.1
ENST00000645074.1
ENST00000645245.1
ENST00000645791.1
ENST00000646175.1
ENST00000647423.1
ENST00000647532.1
CDS GCA 72 bp TCTCCAACTTTTTGTCTGGCAAACATCTCATCATCCTaGAAGACCAAATGCATATCTTACCTACACTTCCTG +
Preference number: 6 (lower is better)
Translates to: SPTFCLANISSS*KTKCISYLHFL
Trigger: CAGGAAGTGTAGGTAAGATATGCATTTGGTCTTGCAGGATGATGAGATGTTTGCCAGACAAAAAGTTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS GCA 72 bp CTGATCTTCTCCCTCTCAAAGTTCTTAATATACTGCTaGAAACAGTCATCAAGACCGGTTCCATTATCAGAG +
Preference number: 6 (lower is better)
Translates to: LIFSLSKFLIYC*KQSSRPVPLSE
Trigger: CTCTGATAATGGAACCGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645679.1
CDS GCA 72 bp CCACTGATCTTCTCCCTCTCAAAGTTCTTAATATACTaGTGCAAACAGTCATCAAGACCGGTTCCATTATCA +
Preference number: 6 (lower is better)
Translates to: PLIFSLSKFLIY*CKQSSRPVPLS
Trigger: TGATAATGGAACCGGTCTTGATGACTGTTTGCAGCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645679.1
CDS CCA 72 bp CTTTTAAGTAGGTTTAGGTCGGCAGAGCCTTGTTCATaGGTCAAACTTCAAACGTCTAGACTGTATGTATGT +
Preference number: 6 (lower is better)
Translates to: LLSRFRSAEPCS*VKLQTSRLYVC
Trigger: ACATACATACAGTCTAGACGTTTGAAGTTTGACCCATGAACAAGGCTCTGCCGACCTAAACCTACTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CAA 72 bp AACCACATTTCCAAGCCTTCTTGGAAAATGGCTGATTaGAGATCTGTTGCACAATTGTTGTTAACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: NHISKPSWKMAD*RSVAQLLLTPG
Trigger: GCCTGGAGTTAACAACAATTGTGCAACAGATCTCAAATCAGCCATTTTCCAAGAAGGCTTGGAAATGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000646697.1
CDS CAA 72 bp CGGCCAAGATCTTTGCAAGAAATTCGTCTTTTGCTCTaGCCTGCTATAGGACCTTGTATTATAATTGCACTG +
Preference number: 6 (lower is better)
Translates to: RPRSLQEIRLLL*PAIGPCIIIAL
Trigger: CAGTGCAATTATAATACAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS CAA 90 bp AAATACCATACTATTTTATATAAGGGACATGAGCATTTGCAGAGTTaGGTATCTGTGGGGGTTCCTGGAACCAATCTCCCTCAACTGTAT +
Preference number: 6 (lower is better)
Translates to: KYHTILYKGHEHLQS*VSVGVPGTNLPQLY
Trigger: ATACAGTTGAGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGTATGGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS TCA 72 bp ACAGATCACAATGATGGCATGCTATGTCTGATATGCTaGTTTTCATCATATTCCTTCCCAGGAAAACACCCA +
Preference number: 6 (lower is better)
Translates to: TDHNDGMLCLIC*FSSYSFPGKHP
Trigger: TGGGTGTTTTCCTGGGAAGGAATATGATGAAAATCAGCATATCAGACATAGCATGCCATCATTGTGATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS GCA 72 bp AATACCATACTATTTTATATAAGGGACATGAGCATTTaGAGAGTTTGGTATCTGTGGGGGTTCCTGGAACCA +
Preference number: 6 (lower is better)
Translates to: NTILFYIRDMSI*RVWYLWGFLEP
Trigger: TGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGTATGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CCA 72 bp GCCATTAAAGCCATAAGTCAATTTCAGAGCAAGAGCTaGAACCAAGTTTTCCCAAAGATCATTCTGTGTAGT +
Preference number: 6 (lower is better)
Translates to: AIKAISQFQSKS*NQVFPKIILCS
Trigger: ACTACACAGAATGATCTTTGGGAAAACTTGGTTCCAGCTCTTGCTCTGAAATTGACTTATGGCTTTAATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643841.1
CDS CCA 72 bp AAAGCTCAGCATCAGAAAGGATTCACCACAGCTACATaGTTCAAACTTAGAAGTGGTCTAGACATCTATTTC +
Preference number: 6 (lower is better)
Translates to: KAQHQKGFTTAT*FKLRSGLDIYF
Trigger: GAAATAGATGTCTAGACCACTTCTAAGTTTGAACCATGTAGCTGTGGTGAATCCTTTCTGATGCTGAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS CCA 72 bp CAACCTCTCAGTCAAGTTGGTGGAATAAGGCATATTTaGAGATGGTCCAAGTACCCAAATAGAAAAAGAACT +
Preference number: 6 (lower is better)
Translates to: QPLSQVGGIRHI*RWSKYPNRKRT
Trigger: AGTTCTTTTTCTATTTGGGTACTTGGACCATCTCCAAATATGCCTTATTCCACCAACTTGACTGAGAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CAA 72 bp AGGTTTCCTTTTTCATCCCACAGTCTGATGATTAACTaGAATCACTTCATCGCCAGCATGGATTTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: RFPFSSHSLMIN*NHFIASMDFLA
Trigger: TGCAAGAAAATCCATGCTGGCGATGAAGTGATTCAAGTTAATCATCAGACTGTGGGATGAAAAAGGAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479158.2
CDS CAA 72 bp ACTTCTAGGTATAAGAGGCACAGTCTGATGATTAACTaGAATCACTTCATCGCCAGCATGGATTTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: TSRYKRHSLMIN*NHFIASMDFLA
Trigger: TGCAAGAAAATCCATGCTGGCGATGAAGTGATTCAAGTTAATCATCAGACTGTGCCTCTTATACCTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000485012.2
ENST00000543067.6
ENST00000642460.1
ENST00000642501.1
ENST00000643171.1
ENST00000643220.1
ENST00000644075.1
ENST00000644095.1
ENST00000644295.1
ENST00000644585.1
ENST00000645245.1
ENST00000645791.1
CDS CAA 72 bp AAACTACCAAGGACTAAAGTCCATGCTAGCATACTCTaGATGAATTCAATACTGTGTAGAGTACCCAGATGG +
Preference number: 6 (lower is better)
Translates to: KLPRTKVHASIL*MNSILCRVPRW
Trigger: CCATCTGGGTACTCTACACAGTATTGAATTCATCAAGAGTATGCTAGCATGGACTTTAGTCCTTGGTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS CAA 72 bp TCACCACGGCCAAGATCTTTGCAAGAAATTCGTCTTTaGCTCTTGCCTGCTATAGGACCTTGTATTATAATT +
Preference number: 6 (lower is better)
Translates to: SPRPRSLQEIRL*LLPAIGPCIII
Trigger: AATTATAATACAAGGTCCTATAGCAGGCAAGAGCAAAAGACGAATTTCTTGCAAAGATCTTGGCCGTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644295.1
CDS CAA 72 bp CTTCTTAAAAATTCATTAATTAATTCTAGAGCTGACTaGCACAGCTCCCTCTCTCCTGCTCAGGTTGCCAAA +
Preference number: 6 (lower is better)
Translates to: LLKNSLINSRAD*HSSLSPAQVAK
Trigger: TTTGGCAACCTGAGCAGGAGAGAGGGAGCTGTGCAAGTCAGCTCTAGAATTAATTAATGAATTTTTAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CAA 90 bp ATTATATCCAAATACCATACTATTTTATATAAGGGACATGAGCATTaGCAGAGTTTGGTATCTGTGGGGGTTCCTGGAACCAATCTCCCT +
Preference number: 6 (lower is better)
Translates to: IISKYHTILYKGHEH*QSLVSVGVPGTNLP
Trigger: AGGGAGATTGGTTCCAGGAACCCCCACAGATACCAAACTCTGCAAATGCTCATGTCCCTTATATAAAATAGTATGGTATTTGGATATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS TCA 72 bp TGCATGAGTTCTCATTATTCAGTTCTCACATATGAGTaGGAACACGTGGTATTTGGTTTTCTGTTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: CMSSHYSVLTYE*EHVVFGFLFLH
Trigger: ATGCAGGAACAGAAAACCAAATACCACGTGTTCTCACTCATATGTGAGAACTGAATAATGAGAACTCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS TCA 72 bp TGTGTGCATGAGTTCTCATTATTCAGTTCTCACATATaGGTGAGAACACGTGGTATTTGGTTTTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: CVHEFSLFSSHI*VRTRGIWFSVP
Trigger: AGGAACAGAAAACCAAATACCACGTGTTCTCACTCATATGTGAGAACTGAATAATGAGAACTCATGCACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS TCA 72 bp ATGAGGGCTGAAATGTTCTCACTGGATATAGCAATGTaGAAGTCACTAGTGATATTCCTGAGAGTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: MRAEMFSLDIAM*KSLVIFLRVVF
Trigger: GAAAACAACTCTCAGGAATATCACTAGTGACTTTCACATTGCTATATCCAGTGAGAACATTTCAGCCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644789.1
CDS TCA 72 bp AGTAAATCACACACCCTTACCTACCATTTAAAGAACTaGCAAGTATATCAAGCACCTTTTGTGTTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SKSHTLTYHLKN*QVYQAPFVLGQ
Trigger: CTGGCCTAACACAAAAGGTGCTTGATATACTTGTCAGTTCTTTAAATGGTAGGTAAGGGTGTGTGATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643309.1
CDS GCA 72 bp ACAACTCATAGACATCTAGTGTTGGCAATATCCACGTaGTTACTTACCCTTCTAAGAATGAATGCGAGTTAT +
Preference number: 6 (lower is better)
Translates to: TTHRHLVLAIST*LLTLLRMNASY
Trigger: ATAACTCGCATTCATTCTTAGAAGGGTAAGTAAGCACGTGGATATTGCCAACACTAGATGTCTATGAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS CCA 72 bp TCACTTAAAGCCATAAGTCAATTTCAGAGCAAGAGCTaGAACCAAGTTTTCCCAAAGATCATTCTGTGTAGT +
Preference number: 6 (lower is better)
Translates to: SLKAISQFQSKS*NQVFPKIILCS
Trigger: ACTACACAGAATGATCTTTGGGAAAACTTGGTTCCAGCTCTTGCTCTGAAATTGACTTATGGCTTTAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644798.1
CDS CAA 72 bp TTTGTTATACAGGTAAATGCGTGTCACAGGGGTTTTTaGTACAGATTATTTCATCACCCAGGCACTAATCCT +
Preference number: 6 (lower is better)
Translates to: FVIQVNACHRGF*YRLFHHPGTNP
Trigger: AGGATTAGTGCCTGGGTGATGAAATAATCTGTACAAAAAACCCCTGTGACACGCATTTACCTGTATAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS CAA 72 bp GCAGCCACAGTTTCTCAGCCACAGAAGTATGTTGGTTaGAAAAACTTAAAAGCCATTAAAGCCATAAGTCAA +
Preference number: 6 (lower is better)
Translates to: AATVSQPQKYVG*KNLKAIKAISQ
Trigger: TTGACTTATGGCTTTAATGGCTTTTAAGTTTTTCAAACCAACATACTTCTGTGGCTGAGAAACTGTGGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643841.1
CDS CAA 90 bp GTTCTCATTATTCAGTTCTCACATATGAGTGAGAACACGTGGTATTaGGTTTTCTGTTCCTGCATTTATTTGCAAAGGATAATAGCCTCC +
Preference number: 6 (lower is better)
Translates to: VLIIQFSHMSENTWY*VFCSCIYLQRIIAS
Trigger: GGAGGCTATTATCCTTTGCAAATAAATGCAGGAACAGAAAACCAAATACCACGTGTTCTCACTCATATGTGAGAACTGAATAATGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645038.1
ENST00000647532.1
CDS GCA 72 bp ATCAATTTTAAATTCAGGCAGGCTAATGAATCCTTCTaGTTTTTCATCCTGAAGAGCCAAGACTCTTGGTTA +
Preference number: 6 (lower is better)
Translates to: INFKFRQANESF*FFILKSQDSWL
Trigger: TAACCAAGAGTCTTGGCTCTTCAGGATGAAAAAGCAGAAGGATTCATTAGCCTGCCTGAATTTAAAATTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647058.1
ENST00000647532.1
CDS CAA 72 bp ACTTGTTACAATGTGCCAGGGACTGTTTTAAGTGTCTaGCACTTATTTCACAATAGTCTATGTAGTGGAAAC +
Preference number: 6 (lower is better)
Translates to: TCYNVPGTVLSV*HLFHNSLCSGN
Trigger: GTTTCCACTACATAGACTATTGTGAAATAAGTGCAAGACACTTAAAACAGTCCCTGGCACATTGTAACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CAA 90 bp GCTCATGATCAAGCTCCTCTGAGTTTTACTATCTCTAACTTTCATTaGATCTGTGCTATATCCATAGCTCCTTATATATCAAGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: AHDQAPLSFTISNFH*ICAISIAPYISSSS
Trigger: ACTTGAACTTGATATATAAGGAGCTATGGATATAGCACAGATCAAATGAAAGTTAGAGATAGTAAAACTCAGAGGAGCTTGATCATGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS CAA 90 bp CTTCATCTAGATTTACCTGGACTTAAACCCTGCCTCTGTTATTTATaGTCTATATGTGATACAGAGCAAACTGGTGAATATGTGCAATTT +
Preference number: 6 (lower is better)
Translates to: LHLDLPGLKPCLCYL*SICDTEQTGEYVQF
Trigger: AAATTGCACATATTCACCAGTTTGCTCTGTATCACATATAGACAATAAATAACAGAGGCAGGGTTTAAGTCCAGGTAAATCTAGATGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS CAA 90 bp AACTCTTACCATAAGTTGGGGTGCTTTCTCGTCTTCCTTGACTACTaGATCTTCCTTTTTCATATTCATAGCAATATAAGACAGTATCTT +
Preference number: 6 (lower is better)
Translates to: NSYHKLGCFLVFLDY*IFLFHIHSNIRQYL
Trigger: AAGATACTGTCTTATATTGCTATGAATATGAAAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAGCACCCCAACTTATGGTAAGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642460.1
CDS TCA 72 bp GGATATAATCTAGTATGTGGCAGACAAACCTGCAAGTaGCCTTACAATAAAGAGAAACATGGAGATACTATA +
Preference number: 6 (lower is better)
Translates to: GYNLVCGRQTCK*PYNKEKHGDTI
Trigger: TATAGTATCTCCATGTTTCTCTTTATTGTAAGGTCACTTGCAGGTTTGTCTGCCACATACTAGATTATATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS TCA 72 bp TGCTATATCCATAGCTCCTTATATATCAAGTTCAAGTaGGATTATACTCCCATCCACTATCACAGAGGAAAA +
Preference number: 6 (lower is better)
Translates to: CYIHSSLYIKFK*DYTPIHYHRGK
Trigger: TTTTCCTCTGTGATAGTGGATGGGAGTATAATCTCACTTGAACTTGATATATAAGGAGCTATGGATATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS CCA 72 bp TTTGCTCATTATAATAGTAAAAAGCACAGCCCTGGGTaGAGATTTAAGATGCTAAAGAGACATGCAACATAT +
Preference number: 6 (lower is better)
Translates to: FAHYNSKKHSPG*RFKMLKRHATY
Trigger: ATATGTTGCATGTCTCTTTAGCATCTTAAATCTCCACCCAGGGCTGTGCTTTTTACTATTATAATGAGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS CAA 72 bp GATTTACCTGGACTTAAACCCTGCCTCTGTTATTTATaGTCTATATGTGATACAGAGCAAACTGGTGAATAT +
Preference number: 6 (lower is better)
Translates to: DLPGLKPCLCYL*SICDTEQTGEY
Trigger: ATATTCACCAGTTTGCTCTGTATCACATATAGACAATAAATAACAGAGGCAGGGTTTAAGTCCAGGTAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS CAA 72 bp CATCCATCATTATCTATCACCACCATTAATATCTACTaGTTACAATGTGCCAGGGACTGTTTTAAGTGTCTT +
Preference number: 6 (lower is better)
Translates to: HPSLSITTINIY*LQCARDCFKCL
Trigger: AAGACACTTAAAACAGTCCCTGGCACATTGTAACAAGTAGATATTAATGGTGGTGATAGATAATGATGGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS TCA 72 bp AAAGAGTTCTCGATTCTTTTAGATTGTATATTTGTATaGCTGCTTTCACTGCTAAGCTTCCACGCAAAACAA +
Preference number: 6 (lower is better)
Translates to: KEFSILLDCIFV*LLSLLSFHAKQ
Trigger: TTGTTTTGCGTGGAAGCTTAGCAGTGAAAGCAGTCATACAAATATACAATCTAAAAGAATCGAGAACTCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS TCA 72 bp GTAATCAACATTAGATATAGCACTTACAGATCACAATaGTGGCATGCTATGTCTGATATGCTGATTTTCATC +
Preference number: 6 (lower is better)
Translates to: VINIRYSTYRSQ*WHAMSDMLIFI
Trigger: GATGAAAATCAGCATATCAGACATAGCATGCCATCATTGTGATCTGTAAGTGCTATATCTAATGTTGATTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642565.1
ENST00000644832.1
CDS TCA 72 bp TATTTTACAAATTCATTTCAATTACCCATCTCTCTTTaGGGCAGGATAGGTAGTCAAGGAATTAACATGTCC +
Preference number: 6 (lower is better)
Translates to: YFTNSFQLPISL*GRIGSQGINMS
Trigger: GGACATGTTAATTCCTTGACTACCTATCCTGCCTCAAAGAGAGATGGGTAATTGAAATGAATTTGTAAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642565.1
CDS GCA 72 bp GTCAATCTGACTTTCAAATATCTGGCTTGGGGTATGTaGTATATATATATAAAGGTCATTTTTCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: VNLTFKYLAWGM*YIYIKVIFHLE
Trigger: TTCCAGGTGAAAAATGACCTTTATATATATATAGCACATACCCCAAGCCAGATATTTGAAAGTCAGATTGAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS CAA 72 bp CAAGCTCCTCTGAGTTTTACTATCTCTAACTTTCATTaGATCTGTGCTATATCCATAGCTCCTTATATATCA +
Preference number: 6 (lower is better)
Translates to: QAPLSFTISNFH*ICAISIAPYIS
Trigger: TGATATATAAGGAGCTATGGATATAGCACAGATCAAATGAAAGTTAGAGATAGTAAAACTCAGAGGAGCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647532.1
CDS CAA 72 bp CAATATTTTAGAATATTCCACAGTCTGATGATTAACTaGAATCACTTCATCGCCAGCATGGATTTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: QYFRIFHSLMIN*NHFIASMDFLA
Trigger: TGCAAGAAAATCCATGCTGGCGATGAAGTGATTCAAGTTAATCATCAGACTGTGGAATATTCTAAAATATTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643841.1
ENST00000644798.1