RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLSTN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171603

Ensembl transcript IDs: ENST00000361311.4, ENST00000377298.9, ENST00000435891.5, ENST00000464286.1, ENST00000477264.1, ENST00000650348.1

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCACTCCAGCTGCTGCTGCCGGGTTGCGTTCTGGGGGTCGCCCTaGTCCCCCTCCTCCTCCTCGCTGCTCTCCGACTCGGCGCTGGTG +
Preference number: 1 (lower is better)
Translates to: SHSSCCCRVAFWGSP*SPSSSSLLSDSALV
Trigger: CACCAGCGCCGAGTCGGAGAGCAGCGAGGAGGAGGAGGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp CAAACGCGGGGCCTGAGGCGCTGGGAGGCCCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGC +
Preference number: 1 (lower is better)
Translates to: QTRGLRRWEAPVRAG*RPERTCQLLVGLKS
Trigger: GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 90 bp CGAAGGGAAACCGCGCGGCGACAGCGTGAGGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTAAACAGAGCAGCTACAGGGACGGGA +
Preference number: 1 (lower is better)
Translates to: RRETARRQREDIPWA*ASVRCLNRAATGTG
Trigger: TCCCGTCCCTGTAGCTGCTCTGTTTAGACAGCGGACAGACGCTCACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCGGTTTCCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 90 bp GCTGGGGACGACTGCGAACGGGTGGGGGTTGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCGGTGTTCCGGGTGCACGAACTGTGG +
Preference number: 1 (lower is better)
Translates to: AGDDCERVGVGQVVA*QVNKGAVFRVHELW
Trigger: CCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp GCAGTGCTGGGGACGACTGCGAACGGGTGGGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAGGAGCGGTGTTCCGGGTGCACGAAC +
Preference number: 1 (lower is better)
Translates to: AVLGTTANGWGLARL*PDRSTKERCSGCTN
Trigger: GTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 90 bp AGGGCAGAGTCGTCCCAGTCCATCTCGTTCTCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACC +
Preference number: 1 (lower is better)
Translates to: RAESSQSISFSFPVS*SRMVRRCAARIRNT
Trigger: GGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGGGATCAGGACACCGGGAAGGAGAACGAGATGGACTGGGACGACTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp TTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCCACCGTGACCTCACAGGTATCCAGG +
Preference number: 1 (lower is better)
Translates to: FCCRRAMSTSRLSCS*FSSSPSTVTSQVSR
Trigger: CCTGGATACCTGTGAGGTCACGGTGGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp GACAGGTCAACAAAGGAGCGGTGTTCCGGGTGCACGAACTGTGGCTaGGCAGCCATGTGGTTGGCGTGTTCCATGGGGTTGGCCGTGTGG +
Preference number: 1 (lower is better)
Translates to: DRSTKERCSGCTNCG*AAMWLACSMGLAVW
Trigger: CCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 90 bp GCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAATaGCTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGC +
Preference number: 1 (lower is better)
Translates to: ATIVAGRGLHTYWPK*LCTSWTLGTGRTDG
Trigger: GCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 90 bp CAAAGGCAAGGCCCGGCCACTTGTAGCTACCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCCTGTGGCCCCCGACTCCCAGCCATA +
Preference number: 1 (lower is better)
Translates to: QRQGPATCSYPDPVS*AAQLEACGPRLPAI
Trigger: TATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGGGTAGCTACAAGTGGCCGGGCCTTGCCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 90 bp GTGAAGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTaGTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGG +
Preference number: 1 (lower is better)
Translates to: VKVMPSSELLTSMPF*CRRAMSTSRLSCSW
Trigger: CCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp GCCAGGTTGTGGCCTGACAGGTCAACAAAGGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATG +
Preference number: 1 (lower is better)
Translates to: ARLWPDRSTKERCSG*TNCGWAAMWLACSM
Trigger: CATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp GGGTGTGCTTGGATCTGCACGCCTCTGCCACTGTCTTCGAGGACCTaGAGGTCCAGCCCCTCCTTGCAGGTATACAGACAGTCGATCACC +
Preference number: 1 (lower is better)
Translates to: GCAWICTPLPLSSRT*RSSPSLQVYRQSIT
Trigger: GGTGATCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCTGCAGGTCCTCGAAGACAGTGGCAGAGGCGTGCAGATCCAAGCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp AAGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTC +
Preference number: 1 (lower is better)
Translates to: KVMPSSELLTSMPFC*RRAMSTSRLSCSWF
Trigger: GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp CTCGTTCTCCTTCCCGGTGTCCTGATCCCGCATGGTCCGCCGATGTaGGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAG +
Preference number: 1 (lower is better)
Translates to: LVLLPGVLIPHGPPM*GPDPKYPQDNHEHQ
Trigger: CTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGGGATCAGGACACCGGGAAGGAGAACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp AGCGGTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTaGCGTGTTCCATGGGGTTGGCCGTGTGGATTACATTCACCTCCA +
Preference number: 1 (lower is better)
Translates to: SGVPGARTVAGQPCG*RVPWGWPCGLHSPP
Trigger: TGGAGGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp AAGGAGCGGTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGGTTGGCCGTGTGGATTACATTCACC +
Preference number: 1 (lower is better)
Translates to: KERCSGCTNCGWAAM*LACSMGLAVWITFT
Trigger: GGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp GGTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTG +
Preference number: 1 (lower is better)
Translates to: GPTHQAQRRSWRGGV*TPTGRNDFVHRGPL
Trigger: CAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 90 bp ATTCCGGGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCCCCGAGGTCTTCTCCCTCCAAGGTC +
Preference number: 1 (lower is better)
Translates to: IPGVGNCREFRYEMC*MALSNSPRSSPSKV
Trigger: GACCTTGGAGGGAGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp CGAATTCCGGGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAATTCCCCGAGGTCTTCTCCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: RIPGVGNCREFRYEM*CMALSNSPRSSPSK
Trigger: CTTGGAGGGAGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGGAATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp CGGGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGAGGTCTTCTCCCTCCAAGGTCAATA +
Preference number: 1 (lower is better)
Translates to: RAWGTAGSSGTRCAA*PYPIPRGLLPPRSI
Trigger: TATTGACCTTGGAGGGAGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp TCTTATCCGCGAGTTTCCCGGAACGGAGAGTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: SYPRVSRNGELSQPD*LGKTGSCAGRHLQR
Trigger: CCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCGTTCCGGGAAACTCGCGGATAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp CTCTTGCCAGCAAGCCCCCACCACGAGCTGAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTCAGTCACAGAGAAGGGCTCGTGGGA +
Preference number: 1 (lower is better)
Translates to: LLPASPHHELSFYLG*MERVILSHREGLVG
Trigger: TCCCACGAGCCCTTCTCTGTGACTGAGGATTACCCGCTCCATCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGCTTGCTGGCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp CACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAAACCGAGG +
Preference number: 1 (lower is better)
Translates to: HLLAEMTLYIVDPWD*ENGWQQSLRKQKPR
Trigger: CCTCGGTTTCTGCTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 90 bp CAAATTCAGAAGCTGCTCGGGCAAAATGGTGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCTGTAAAACCATCACGTAGCCATCTA +
Preference number: 1 (lower is better)
Translates to: QIQKLLGQNGGRHSG*SWAPRAVKPSRSHL
Trigger: TAGATGGCTACGTGATGGTTTTACAGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGCTTCTGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 90 bp AGAACAGGCTGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCTGAGTACGGATCGCTCAGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: RTGCFGKFQHFDFGP*VSPGRSEYGSLRPP
Trigger: AGGAGGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 90 bp ATTGTGCTGGTGATTTTGAGTCTGCGAATTCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCAAT +
Preference number: 1 (lower is better)
Translates to: IVLVILSLRIPGVGN*REFRYEMCCMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCAGACTCAAAATCACCAGCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp AACACCCCTTCTGAGCTTTCAAATTCAGAAGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTGATCTTGGGCTCCTCGGGCTGTAAA +
Preference number: 1 (lower is better)
Translates to: NTPSELSNSEAARAK*WTPLRLILGSSGCK
Trigger: TTTACAGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAAAGCTCAGAAGGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 90 bp TCTGCACACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTaGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: SAHLLAEMTLYIVDP*DWENGWQQSLRKQK
Trigger: TTTCTGCTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 90 bp CACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTTCCGGTCAAGCAAGGACCTGGCATG +
Preference number: 1 (lower is better)
Translates to: HLHLKFVADVAAIQL*ADELKLPVKQGPGM
Trigger: CATGCCAGGTCCTTGCTTGACCGGAAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTSSSWD*RARPGR
Trigger: TCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTG +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLRAATA*GHPLGV
Trigger: CACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCACGGCTCTTTGGGGCTaGCCGACACGACGCCATCCG +
Preference number: 2 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFTALWG*PTRRHP
Trigger: CGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGT...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 90 bp GTCGCAGTGCTGGGGACGACTGCGAACGGGTGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACAAAGGAGCGGTGTTCCGGGTGCACG +
Preference number: 2 (lower is better)
Translates to: VAVLGTTANGWGLAR*WPDRSTKERCSGCT
Trigger: CGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAGCACTGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAAT +
Preference number: 2 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSWRGGV*TPTGRN
Trigger: ATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCA...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAAT +
Preference number: 2 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPWRGGV*TPTGRN
Trigger: ATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTG +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMARAATA*GHPLGV
Trigger: CACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCCAGGTATCCAGGTCGTaGACGATCTCCTCGGACACC +
Preference number: 2 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFQVSRS*TISSDT
Trigger: GGTGTCCGAGGAGATCGTGCACGACCTGGATACCTG...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEVDPWD*ENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCAC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAACGACTGCGAACGGGTaGGGGTTGGCCAGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLTTANG*GLARLW
Trigger: CCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 90 bp CCGAATGGCCCATGTCTCATCCACACCGAGATGGTGAACGGCTCTTaGGGGCTGACCGACACGACGCCATCCGGGATCCTCACTGCCTGG +
Preference number: 2 (lower is better)
Translates to: PNGPCLIHTEMVNGS*GLTDTTPSGILTAW
Trigger: CCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGACATGGGCCATTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGGRHSG*SWAPRA
Trigger: AGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCC...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACCGACTCGGCGCTGGTaGTGTCATCCTCTTCTTCGC +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLPTRRW*CHPLLR
Trigger: GCGAAGAAGAGGATGACATCACCAGCGCCGAGTCGG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 2 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 2 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCATCTCCCTCTGGGGTCTaGGGAGGGAGGACCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASPSGV*GGRTRR
Trigger: CCGCCGGGTCCTCCCTCCCCAGACCCCAGAGGGAGA...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 90 bp GAGCGGTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTaGGCGTGTTCCATGGGGTTGGCCGTGTGGATTACATTCACCTCC +
Preference number: 2 (lower is better)
Translates to: ERCSGCTNCGWAAMW*ACSMGLAVWITFTS
Trigger: GGAGGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCTCATCACAGACCTaGTTCAACTTCCAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTSSSQT*FNFQWN
Trigger: GTTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATTGGCTGGGGTGTGCTTaGATCTGCACGCCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: VFRVHELWLGSHVVGVFHWLGCA*ICTPLP
Trigger: TGGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCA...ATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATCAACTGTCGCAGTGCTaGGGACGACTGCGAACGGGT +
Preference number: 2 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHQLSQC*GRLRTG
Trigger: ACCCGTTCGCAGTCGTCCCCAGCACTGCGACAGTTG...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 90 bp GATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAATGACTTaGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: DRGGEGSAHLLAEMT*YIVDPWDWENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 2 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSTYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATAGCTGCTCACTTCAATaGCCTTCTGCTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHSCSLQ*PSAAGG
Trigger: CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCT...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp CGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAGGAAGGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: RCAARIRNTPRIIMNTRKAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...CTTCCTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHLAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLTGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATAAACCTCCTCGTAGCTaGCCATGGTGTCCACGCCTG +
Preference number: 2 (lower is better)
Translates to: VFRVHELWLGSHVVGVFHKPPRS*PWCPRL
Trigger: CAGGCGTGGACACCATGGCCAGCTACGAGGAGGTTT...ATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATGCCGGGTTGCGTTCTaGGGGTCGCCCTGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLCRVAF*GSPCSP
Trigger: GGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCATTACCGGGTGGGAGTaGGCATGTTTTACCCTTTGT +
Preference number: 2 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFITGWE*ACFTLC
Trigger: ACAAAGGGTAAAACATGCTCACTCCCACCCGGTAAT...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACAAGGCTGCACACGGTaGGACCAGGCCACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTQGCTR*DQATAQ
Trigger: CTGGGCAGTGGCCTGGTCTCACCGTGTGCAGCCTTG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGCCCCCACCACGAGCTaGGTTTCTATCTTGGATGGA +
Preference number: 2 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHAPTTS*VSILDG
Trigger: TCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGC...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCGACACCAGTGATTCTTaGACTGTGGGGTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGDTSDS*TVGSSA
Trigger: GGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTC...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CACAGGTATCCAGGTCGTGCACGATCTCCTCGGACACCAGTGATTCTTGAACTGCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: HRYPGRARSPRTPVILELPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...CAGTTCAAGAATCACTGGTGTCCGAGGAGATCGTGCACGACCTGGATACCTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMATARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLTYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCCACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp CACAGGTATCCAGGTCGTGCACGATCTCCTCGGACACCAGTGATTCTTGAACTGGTGCAGGTCGCCACCTaGAGAGGCCACAGTCACAGG +
Preference number: 2 (lower is better)
Translates to: HRYPGRARSPRTPVILELVQVAT*RGHSHR
Trigger: CCTGTGACTGTGGCCTCTGCAGGTGGCGACCTGCAC...CAGTTCAAGAATCACTGGTGTCCGAGGAGATCGTGCACGACCTGGATACCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 2 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTCTCCCTCTGGGGTCTaGGGAGGGAGGACCCGGCGG +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQSPSGV*GGRTRR
Trigger: CCGCCGGGTCCTCCCTCCCCAGACCCCAGAGGGAGA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTTARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTCTCCTGGACGTTCTaGGTACGGATCGCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTLSWTF*VRIAQA
Trigger: GGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCTGTCTTCGAGGACCTaGAGGTCCAGCCCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALSSRT*RSSPSL
Trigger: CAAGGAGGGGCTGGACCTGCAGGTCCTCGAAGACAG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAG +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRPGVGN*REFRYE
Trigger: CTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 2 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 90 bp TTCTTATCCGCGAGTTTCCCGGAACGGAGAGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: FLSASFPERRVKPAR*PRKNWVMCRSPPAE
Trigger: CTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCGTTCCGGGAAACTCGCGGATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTCTCCTGGACGTTCTaGGTACGGATCGCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: MFYPLSTSPAGMAFLECELSWTF*VRIAQA
Trigger: GGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCACTGCCCAGGGAGCTaGTGTCGGAGGAGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSHCPGS*CRRRSV
Trigger: CACACTCCTCCTCCGACAGCAGCTCCCTGGGCAGTG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASGQPV*RTPLSF
Trigger: GAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGGGCTCGTGGGACGTaGCATCCACATAGAGAGTCA +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMARARGT*HPHRES
Trigger: TGACTCTCTATGTGGATGGCACGTCCCACGAGCCCT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCA +
Preference number: 2 (lower is better)
Translates to: RSPRTPVILELWGPQPRPLSQPD*LGKTGS
Trigger: TGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAA...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCC +
Preference number: 2 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHRYEMC*MALSNS
Trigger: GGAATTGGATAAGGCCATGCAGCACATCTCGTACCT...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCGAGCCCAGCTGGCATaGCTTTTCTGGAGTGCGAGG +
Preference number: 2 (lower is better)
Translates to: MFYPLSTSPAGMAFLECERAQLA*LFWSAR
Trigger: CCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRTARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTTTCTGACCTATCATaGGTATACACATCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLLSDLS*VYTSAK
Trigger: CTTCGCAGATGTGTATACTCATGATAGGTCAGAAAG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLSGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCGTCATTTTCAACTCCTaGAAACTCTTGCCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: RSPRTPVILELWGPQPRPVIFNS*KLLPAS
Trigger: GCTTGCTGGCAAGAGTTTTCAGGAGTTGAAAATGAC...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCAACTGGCTGGGGTGTaGTTGGATCTGCACGCCTCT +
Preference number: 2 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEQLAGV*LDLHAS
Trigger: AGAGGCGTGCAGATCCAAGCACACCCCAGCCAGTTG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRRLSCS*FSSSPS
Trigger: GGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 90 bp GTCTGCACACCTACTGGCCGAAATGACTTTGTACATCGTGGACCCTaGGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: VCTPTGRNDFVHRGP*GLGERMAAESSKAE
Trigger: TTCTGCTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMATYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAAAATTCCAGCACTTTaGCTTCGGGCCATGCGTCTC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAKIPAL*LRAMRL
Trigger: GAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGC +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSSEGS*RKRKIS
Trigger: GCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTATCGCTCAGGCCTCCTaGCGTCTCCAAAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRIAQAS*RLQKEW
Trigger: CCACTCCTTTTGGAGACGGCAGGAGGCCTGAGCGAT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCGAGCCCAGCTGGCATaGCTTTTCTGGAGTGCGAGG +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQRAQLA*LFWSAR
Trigger: CCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCGTCTCCAAAAGGAGTaGTCAGCCGGTCTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRRLQKE*SAGLQD
Trigger: GTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLTGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTC +
Preference number: 2 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGSFYLG*MERVIL
Trigger: GAGGATTACCCGCTCCATCCATCCAAGATAGAAACT...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 2 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRATYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLEQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCTCCTCGGACACCAGTaGTTCTTGAACTGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRLLGHQ*FLNCGV
Trigger: GACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTATGGCTTTTCTGGAGTaGGAGGGGCCAGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSMAFLE*EGPVSS
Trigger: AGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCAT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp TTCCCCGAGGTCTTCTCCCTCCAAGGTCAATACCAACTGGCTGGGGTGTGCTTGCTTCCAGTGGAACTCTaGAGGTCTGTATTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: FPEVFSLQGQYQLAGVCLLPVEL*RSVFLL
Trigger: GAGAAGAAATACAGACCTGCAGAGTTCCACTGGAAG...CAAGCACACCCCAGCCAGTTGGTATTGACCTTGGAGGGAGAAGACCTCGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 2 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQAARAK*WTPLRL
Trigger: CAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGC...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGATTGTCTCCTTCTTCCTaGCGAATGGCCCATGTCTCA +
Preference number: 2 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRLSPSS*RMAHVS
Trigger: TGAGACATGGGCCATTCGGCAGGAAGAAGGAGACAA...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp TTAAAACACTTGATTGTGCTGGTGATTTTGAGTCTGCGAATTCCGGGCGTGGGGGGTCCAGCCCCTCCTTaGAGGTATACAGACAGTCGA +
Preference number: 2 (lower is better)
Translates to: LKHLIVLVILSLRIPGVGGPAPP*RYTDSR
Trigger: TCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACC...CCCCACGCCCGGAATTCGCAGACTCAAAATCACCAGCACAATCAAGTGTTTTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 2 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR TCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGATCGGGAATTCTACATTaGGGACGTAGTGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRSGILH*GRSGAI
Trigger: AATGGCACCACTACGTCCTCAATGTAGAATTCCCGA...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCATGGCTTTTCTGGAGTaGGAGGGGCCAGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLMAFLE*EGPVSS
Trigger: AGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCAT...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCGTGTTCCATGGGGTTaGCCGTGTGGATTACATTCA +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRRVPWG*PCGLHS
Trigger: TGAATGTAATCCACACGGCCAACCCCATGGAACACG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTTTCTGACCTATCATaGGTATACACATCTGCGAAG +
Preference number: 2 (lower is better)
Translates to: RARAQSSELHFTFQSRVTLSDLS*VYTSAK
Trigger: CTTCGCAGATGTGTATACTCATGATAGGTCAGAAAG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGAAAAACTGGGTCATGTaGAGGTCGCCACCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQKNWVM*RSPPAE
Trigger: CTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTT...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp TTAAAACACTTGATTGTGCTGGTGATTTTGAGTCTGCGAATTCCGGGCGTGGGGAAGGTCAATACCAACTaGCTGGGGTGTGCTTGGATC +
Preference number: 2 (lower is better)
Translates to: LKHLIVLVILSLRIPGVGKVNTN*LGCAWI
Trigger: GATCCAAGCACACCCCAGCCAGTTGGTATTGACCTT...CCCCACGCCCGGAATTCGCAGACTCAAAATCACCAGCACAATCAAGTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGA +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQTRCAA*PYPIPR
Trigger: TCGGGGAATTGGATAAGGCCATGCAGCACATCTCGT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGATTACCGGGTGGGAGTaGGCATGTTTTACCCTTTGT +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQITGWE*ACFTLC
Trigger: ACAAAGGGTAAAACATGCTCACTCCCACCCGGTAAT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAAT +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQFRYEM*CMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTTCAAATTCAGAAGCTaGTCGGGCAAAATGGTGGAC +
Preference number: 2 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQFKFRS*SGKMVD
Trigger: GTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGREQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 2 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGCTGAGTTTCTATCTTaGATGGATGGAGCGGGTAAT +
Preference number: 2 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIAEFLS*MDGAGN
Trigger: ATTACCCGCTCCATCCATCCAAGATAGAAACTCAGC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GGCCTGAGGCGCTGGGAGGCCCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGA +
Preference number: 3 (lower is better)
Translates to: GLRRWEAPVRAG*RPERTCQLLVG
Trigger: TCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGCGCCTCAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp GGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGAGGGTGGGCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: GGQRGRVSSSWD*RARPGRGWAGS
Trigger: GCTCCCCGCCCACCCTCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 72 bp AGCTGCTGCTGCCGGGTTGCGTTCTGGGGGTCGCCCTaGTCCCCCTCCTCCTCCTCGCTGCTCTCCGACTCG +
Preference number: 3 (lower is better)
Translates to: SCCCRVAFWGSP*SPSSSSLLSDS
Trigger: CGAGTCGGAGAGCAGCGAGGAGGAGGAGGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp TCATCCCACTCCAGCTGCTGCTGCCGGGTTGCGTTCTaGGGGTCGCCCTGCTCCCCCTCCTCCTCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: SSHSSCCCRVAF*GSPCSPSSSSL
Trigger: CAGCGAGGAGGAGGAGGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 72 bp TACACATCTGCGAAGGGAAACCGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTGAGCGTCTGTCCGCTG +
Preference number: 3 (lower is better)
Translates to: YTSAKGNRAATA*GHPLGVSVCPL
Trigger: CAGCGGACAGACGCTCACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCGGTTTCCCTTCGCAGATGTGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp TCGTCCCAGTCCATCTCGTTCTCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGATGTGCGGCCCGGATC +
Preference number: 3 (lower is better)
Translates to: SSQSISFSFPVS*SRMVRRCAARI
Trigger: GATCCGGGCCGCACATCGGCGGACCATGCGGGATCAGGACACCGGGAAGGAGAACGAGATGGACTGGGACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GGGACGACTGCGAACGGGTGGGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAGGAGCGGTGTTCCGGG +
Preference number: 3 (lower is better)
Translates to: GTTANGWGLARL*PDRSTKERCSG
Trigger: CCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCATGGTGAACGGCTCTTaGGGGCTGACCGACACGACG +
Preference number: 3 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPMVNGS*GLTDTT
Trigger: CGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCAT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 72 bp GGCCCGGCCACTTGTAGCTACCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCCTGTGGCCCCCGACTC +
Preference number: 3 (lower is better)
Translates to: GPATCSYPDPVS*AAQLEACGPRL
Trigger: GAGTCGGGGGCCACAGGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGGGTAGCTACAAGTGGCCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp ACCGCGCGGCGACAGCGTGAGGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTAAACAGAGCAGCTACA +
Preference number: 3 (lower is better)
Translates to: TARRQREDIPWA*ASVRCLNRAAT
Trigger: TGTAGCTGCTCTGTTTAGACAGCGGACAGACGCTCACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp GACTGCGAACGGGTGGGGGTTGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCGGTGTTCCGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: DCERVGVGQVVA*QVNKGAVFRVH
Trigger: GTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp TCGCAGTGCTGGGGACGACTGCGAACGGGTGGGGGTTaGCCAGGTTGTGGCCTGACAGGTCAACAAAGGAGC +
Preference number: 3 (lower is better)
Translates to: SQCWGRLRTGGG*PGCGLTGQQRS
Trigger: GCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAGCACTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp CCATCTCGTTCTCCTTCCCGGTGTCCTGATCCCGCATaGTCCGCCGATGTGCGGCCCGGATCCGAAATACCC +
Preference number: 3 (lower is better)
Translates to: PSRSPSRCPDPA*SADVRPGSEIP
Trigger: GGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGGGATCAGGACACCGGGAAGGAGAACGAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTaGTCAGAGCTCCGAACTTCACTTTACATTCCAGTC +
Preference number: 3 (lower is better)
Translates to: GSGEGGPGGKSP*SELRTSLYIPV
Trigger: GACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 72 bp CCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PSSELLTSMPFC*RRAMSTSRLSC
Trigger: GCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp TGGCCTGACAGGTCAACAAAGGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCAGCCATGTGGTTGGCG +
Preference number: 3 (lower is better)
Translates to: WPDRSTKERCSG*TNCGWAAMWLA
Trigger: CGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp CTTCCCGGTGTCCTGATCCCGCATGGTCCGCCGATGTaGGGCCCGGATCCGAAATACCCCCAGGATAATCAT +
Preference number: 3 (lower is better)
Translates to: LPGVLIPHGPPM*GPDPKYPQDNH
Trigger: ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGGGATCAGGACACCGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp CCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTaGCGTGTTCCATGGGGTTGGCCGTGTGGATTACAT +
Preference number: 3 (lower is better)
Translates to: PGARTVAGQPCG*RVPWGWPCGLH
Trigger: ATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp TGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGGTTGGCCGTGTGGATT +
Preference number: 3 (lower is better)
Translates to: CSGCTNCGWAAM*LACSMGLAVWI
Trigger: AATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GTCAACAAAGGAGCGGTGTTCCGGGTGCACGAACTGTaGCTGGGCAGCCATGTGGTTGGCGTGTTCCATGGG +
Preference number: 3 (lower is better)
Translates to: VNKGAVFRVHEL*LGSHVVGVFHG
Trigger: CCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 72 bp GTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAATaGCTTTGTACATCGTGGACCCTTGGGACTGGGAGA +
Preference number: 3 (lower is better)
Translates to: VAGRGLHTYWPK*LCTSWTLGTGR
Trigger: TCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 3 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTGGCTGGGGTGTGCTaGGATCTGCACGCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: MFYPLSTSPAGMAFLECELAGVC*DLHASA
Trigger: GGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCAG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp CACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAATGACTTTGTACATCGT +
Preference number: 3 (lower is better)
Translates to: HQAQRRSWRGGV*TPTGRNDFVHR
Trigger: ACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 72 bp GTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCCCCGAGGTCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: VGNCREFRYEMC*MALSNSPRSSP
Trigger: GGGAGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAATTCCCCGAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: GVGNCREFRYEM*CMALSNSPRSS
Trigger: AGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp GTGATTTTGAGTCTGCGAATTCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAGATGTGCTGCATGGCC +
Preference number: 3 (lower is better)
Translates to: VILSLRIPGVGN*REFRYEMCCMA
Trigger: GGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCAGACTCAAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp CGGAGAGTTAAGCCAGCCAGATTGCCTCGGAAAAACTaGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: RRVKPARLPRKN*VMCRSPPAEAT
Trigger: TGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp CGAGGTCTTCTCCCTCCAAGGTCAATACCAACTGGCTaGGGTGTGCTTGGATCTGCACGCCTCTGCCACTGT +
Preference number: 3 (lower is better)
Translates to: RGLLPPRSIPTG*GVLGSARLCHC
Trigger: ACAGTGGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCAGTTGGTATTGACCTTGGAGGGAGAAGACCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp ACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATaGGGTTGGCCGTGTGGATTACATTCACCTCCACCT +
Preference number: 3 (lower is better)
Translates to: TVAGQPCGWRVP*GWPCGLHSPPP
Trigger: AGGTGGAGGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR GCA 72 bp CCTCCTGCCGTCTCCAAAAGGAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTCTCCTTTTACCAGCAG +
Preference number: 3 (lower is better)
Translates to: PPAVSKRSGQPV*RTPLSFSFYQQ
Trigger: CTGCTGGTAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACGGCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CCA 72 bp GGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGAGGTCTTCTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: GTAGSSGTRCAA*PYPIPRGLLPP
Trigger: TGGAGGGAGAAGACCTCGGGGAATTGGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GAGCTTTCAAATTCAGAAGCTGCTCGGGCAAAATGGTaGACGCCACTCAGGCTGATCTTGGGCTCCTCGGGC +
Preference number: 3 (lower is better)
Translates to: ELSNSEAARAKW*TPLRLILGSSG
Trigger: GCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GCAAGCCCCCACCACGAGCTGAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTCAGTCACAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: ASPHHELSFYLG*MERVILSHREG
Trigger: CCCTTCTCTGTGACTGAGGATTACCCGCTCCATCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 3 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 3 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 3 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACTGGCCGAAATGACTTaGTACATCGTGGACCCTTGG +
Preference number: 3 (lower is better)
Translates to: GRNDFVHRGPLGLGERMALAEMT*YIVDPW
Trigger: CCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAAGGTCCAGCCCCTCCTaGCAGGTATACAGACAGTCG +
Preference number: 3 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLRSSPS*QVYRQS
Trigger: CGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 72 bp TCTGCAGGTCTGTATTTCTTCTCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGCCGGCACCCGTGGACA +
Preference number: 3 (lower is better)
Translates to: SAGLYFFSSEGS*RKRKISRHPWT
Trigger: TGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGAGAAGAAATACAGACCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CCA 72 bp GCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAGAGTCTTCGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: AEMTLYIVDPWD*ENGWQQSLRKQ
Trigger: CTGCTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CCA 72 bp CTACTGGCCGAAATGACTTTGTACATCGTGGACCCTTaGGACTGGGAGAACGGATGGCAGCAGAGTCTTCGA +
Preference number: 3 (lower is better)
Translates to: LLAEMTLYIVDP*DWENGWQQSLR
Trigger: TCGAAGACTCTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CCA 72 bp TCTGAGCTTTCAAATTCAGAAGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTGATCTTGGGCTCCTCG +
Preference number: 3 (lower is better)
Translates to: SELSNSEAARAK*WTPLRLILGSS
Trigger: CGAGGAGCCCAAGATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAAAGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CAA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 3 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACCATGACTGTTTGTTaGCTCTCCTGCCCTACCACC +
Preference number: 3 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETMTVC*LSCPTT
Trigger: GGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAACCATGACTGTTTGTTaGCTCTCCTGCCCTACCACC +
Preference number: 3 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLTMTVC*LSCPTT
Trigger: GGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 3 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTAC +
Preference number: 3 (lower is better)
Translates to: RARAQSSELHFTFQSRVTLDHDC*FALLPY
Trigger: GTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR GCA 72 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCTGAGTACGGATCGCTC +
Preference number: 3 (lower is better)
Translates to: CFGKFQHFDFGP*VSPGRSEYGSL
Trigger: GAGCGATCCGTACTCAGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGAGCATGTTTTACCCTTaGTCAACGAGCCCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPSMFYP*STSPAG
Trigger: GCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCT...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 3 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: RARAQSSELHFTFQSRVTREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR-3UTR CAA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTC +
Preference number: 3 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLVKPAR*PRKNWV
Trigger: GACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAAC...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CAA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 3 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp AACTTTATTGTAGCGGATACACTTTCTGACCTATCATaGGTATACACATCTGCGAAGGGAAACCGCGCGGCG +
Preference number: 3 (lower is better)
Translates to: NFIVADTLSDLS*VYTSAKGNRAA
Trigger: CGCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCATGATAGGTCAGAAAGTGTATCCGCTACAATAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR TCA 72 bp CTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTTCCGGTCAAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: LKFVADVAAIQL*ADELKLPVKQG
Trigger: TCCTTGCTTGACCGGAAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGCTACATCAGCAACGAATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR TCA 72 bp TTAGAACCAGAACTTTATTGTAGCGGATACACTTTCTaGCCTATCATGAGTATACACATCTGCGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LEPELYCSGYTF*PIMSIHICEGK
Trigger: TTTCCCTTCGCAGATGTGTATACTCATGATAGGTCAGAAAGTGTATCCGCTACAATAAAGTTCTGGTTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTACGGCTCTTTGGGGCTaGCCGACACGACGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTTALWG*PTRRHP
Trigger: CGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTGRHSG*SWAPRA
Trigger: AGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCGGCCAACGCGCCGGTaGCCGGCTCATACTCAATCC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTRPTRR*PAHTQS
Trigger: GGATTGAGTATGAGCCGGGCACCGGCGCGTTGGCCG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGCAGCAGCTCGGCAGTaGCCGCGGCCGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGAAARQ*PRPHHR
Trigger: TCTGTGGTGCGGCCGCGGGCACTGCCGAGCTGCTGC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFSFPVS*SRMVRR
Trigger: TCGGCGGACCATGCGGGATCAGGACACCGGGAAGGA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGCAGCAGCTCGGCAGTaGCCGCGGCCGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEAAARQ*PRPHHR
Trigger: TCTGTGGTGCGGCCGCGGGCACTGCCGAGCTGCTGC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFPGVGN*REFRYE
Trigger: CTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGG...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCTGCTGCTGCCGGGTTaGGTTCTGGGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSLLLPG*VLGVAL
Trigger: CAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCTGCTGCTGCCGGGTTaGGTTCTGGGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGLLLPG*VLGVAL
Trigger: CAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTATCCAGCGCGATCAGTaGGGGGTCGAGGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTIQRDQ*GVEEHG
Trigger: ACCGTGCTCCTCGACCCCCCACTGATCGCGCTGGAT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCACGGCTCTTTGGGGCTaGCCGACACGACGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGTALWG*PTRRHP
Trigger: CGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGGRHSG*SWAPRA
Trigger: AGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPGRHSG*SWAPRA
Trigger: AGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGCACGGGTCAGTAGCTaGGGGTGGAGTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTARVSS*GWSHPT
Trigger: AGTGGGATGACTCCACCCTCAGCTACTGACCCGTGC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGTGCAGGTCGCCACCTaGAGAGGCCACAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFVQVAT*RGHSHR
Trigger: CCTGTGACTGTGGCCTCTGCAGGTGGCGACCTGCAC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCATGGTCCGCCGATGTaGGGCCCGGATCCGAAATAC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTHGPPM*GPDPKY
Trigger: GTATTTCGGATCCGGGCCGCACATCGGCGGACCATG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTCCCACTCCAGCTGCTaGTGCCGGGTTGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFSHSSC*CRVAFW
Trigger: CCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VFRVHELWLGSHVVGVFHAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...ATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCACTGCCCAGGGAGCTaGTGTCGGAGGAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFHCPGS*CRRRSV
Trigger: CACACTCCTCCTCCGACAGCAGCTCCCTGGGCAGTG...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCTATGCCGTGGTAGGTaGGCTCCAGCCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLCRGR*APARAC
Trigger: ACAAGCCCTGGCTGGAGCCCACCTACCACGGCATAG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPGSTRG*QQLGSA
Trigger: GGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCAACTGTCGCAGTGCTaGGGACGACTGCGAACGGGT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTQLSQC*GRLRTG
Trigger: ACCCGTTCGCAGTCGTCCCCAGCACTGCGACAGTTG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCAAGCAGAAACCGAGGTaGCCGGGGGCACGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFKQKPR*PGARVS
Trigger: ACTGACCCGTGCCCCCGGCCACCTCGGTTTCTGCTT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPGPWSS*GIHSGM
Trigger: CATCCCCGAGTGGATCCCTCAACTGGACCATGGGCC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAACGGCTCTTTGGGGCTaGCCGACACGACGCCATCCG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAETALWG*PTRRHP
Trigger: CGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTGGTGTCCACGCCTGTaGAGGTCATGCCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTWCPRL*RSCPVQ
Trigger: CTGAACTGGGCATGACCTTCACAGGCGTGGACACCA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGCACGGGTCAGTAGCTaGGGGTGGAGTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFARVSS*GWSHPT
Trigger: AGTGGGATGACTCCACCCTCAGCTACTGACCCGTGC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPDIPWA*ASVRCL
Trigger: TAGACAGCGGACAGACGCTCACGCCCAGGGGATGTC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGRAATA*GHPLGV
Trigger: CACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCG...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSERCSG*TNCGWA
Trigger: TGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACAACTGTCGCAGTaGTGGGGACGACTGCGAACG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTSQLSQ*WGRLRT
Trigger: CGTTCGCAGTCGTCCCCAGCACTGCGACAGTTGTGA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACACTCCAGCTGCTGCTaGCGGGTTGCGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEHSSCC*RVAFWG
Trigger: CCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTCCCACTCCAGCTGCTaGTGCCGGGTTGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSHSSC*CRVAFW
Trigger: CCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGGCGGGAAGAGCCCGTaGTCAGAGCTCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFGGKSP*SELRTS
Trigger: TGAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCATCCAGCGCGATCAGTaGGGGGTCGAGGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSIQRDQ*GVEEHG
Trigger: ACCGTGCTCCTCGACCCCCCACTGATCGCGCTGGAT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTGGCTGGGGTGTGCTTaGATCTGCACGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFWLGCA*ICTPLP
Trigger: TGGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFRLSCS*FSSSPS
Trigger: GGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGGWAAM*LACSMG
Trigger: CCCCATGGAACACGCCAACCACATGGCTGCCCAGCC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCACGACTGCGAACGGGTaGGGGTTGGCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGTTANG*GLARLW
Trigger: CCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCAAGCAGAAACCGAGGTaGCCGGGGGCACGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGKQKPR*PGARVS
Trigger: ACTGACCCGTGCCCCCGGCCACCTCGGTTTCTGCTT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCGAGCCCAGCTGGCATaGCTTTTCTGGAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFRAQLA*LFWSAR
Trigger: CCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPTARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSTARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTAAGCAGCAGGGCTCCTaGGGGAGAGGGATTTCAACC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTKQQGS*GRGIST
Trigger: GGTTGAAATCCCTCTCCCCCAGGAGCCCTGCTGCTT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCTCATCCACACCGAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCGCCCGCGGCCGCACCTaGAGTAAGGCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: SHPHRDGERLFGADRHDAARGRT*SKARRS
Trigger: ACTGCGCCTGGCCTTACTCCAGGTGCGGCCGCGGGC...GGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCCACTGTGGCCTGTACTaGGGCGACTGGCTCGTCACA +
Preference number: 4 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFHCGLY*GDWLVT
Trigger: TGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTG...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFVEGLL*VGVSVA
Trigger: TGCGACCGAGACACCTACTCAGAGAAGTCCCTCCAC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEGPWSS*GIHSGM
Trigger: CATCCCCGAGTGGATCCCTCAACTGGACCATGGGCC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCTGCCTGGGTGCCGTTaGACTCAAACACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSLPGCR*TQTPGR
Trigger: GCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCCTGCCTGGGTGCCGTTaGACTCAAACACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFLPGCR*TQTPGR
Trigger: GCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAG...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGACACCAGTGATTCTTaGACTGTGGGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTDTSDS*TVGSSA
Trigger: GGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCCTCTCCCTCCACCGTaGCCTCACAGGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPPLPPP*PHRYPG
Trigger: ACCTGGATACCTGTGAGGTCACGGTGGAGGGAGAGG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSGQVVA*QVNKGA
Trigger: CGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCCGACTCGGCGCTGGTaGTGTCATCCTCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGPTRRW*CHPLLR
Trigger: GCGAAGAAGAGGATGACATCACCAGCGCCGAGTCGG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACAAGGCTGCACACGGTaGGACCAGGCCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLQGCTR*DQATAQ
Trigger: CTGGGCAGTGGCCTGGTCTCACCGTGTGCAGCCTTG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCTCTCCTGGACGTTCTaGGTACGGATCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGLSWTF*VRIAQA
Trigger: GGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTCCAGCCAGGGCTTGTaGTTGTTAACTCGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSSQGL*LLTRAA
Trigger: GGCCGCGCGAGTTAACAAGCACAAGCCCTGGCTGGA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACCTCCAGGCTCTCCTaGTCGTGGTTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFTSRLS*SWFSSS
Trigger: AGAGGAGCTGAACCACGAGCAGGAGAGCCTGGAGGT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCAGCTGCTCACTTCAATaGCCTTCTGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFSCSLQ*PSAAGG
Trigger: CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATCCCACTCCAGCTGCTaGTGCCGGGTTGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAESHSSC*CRVAFW
Trigger: CCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCTCATCCCACTCCAGCTaGTGCTGCCGGGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSSSHSS*CCRVAF
Trigger: GAACGCAACCCGGCAGCAGCAGCTGGAGTGGGATGA...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCTGCGAATTCCGGGCGTaGGGAACTGCCGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSCEFRA*GTAGSS
Trigger: TGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCA...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSAARAK*WTPLRL
Trigger: CAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGGGCAGCCATGTGGTTaGCGTGTTCCATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPGQPCG*RVPWGW
Trigger: CCAACCCCATGGAACACGCCAACCACATGGCTGCCC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCGGGTGCACGAACTGTaGCTGGGCAGCCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPRVHEL*LGSHVV
Trigger: AACCACATGGCTGCCCAGCCACAGTTCGTGCACCCG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCAACTGTCGCAGTGCTaGGGACGACTGCGAACGGGT +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGQLSQC*GRLRTG
Trigger: ACCCGTTCGCAGTCGTCCCCAGCACTGCGACAGTTG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTGCCGGGTTGCGTTCTaGGGGTCGCCCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGCRVAF*GSPCSP
Trigger: GGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPVDPWD*ENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCAC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFLAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCGAGCCCAGCTGGCATaGCTTTTCTGGAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSRAQLA*LFWSAR
Trigger: CCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTCTCCCTCTGGGGTCTaGGGAGGGAGGACCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGSPSGV*GGRTRR
Trigger: CCGCCGGGTCCTCCCTCCCCAGACCCCAGAGGGAGA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAACAGCTAGAGGCCTGTaGCCCCCGACTCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAETARGL*PPTPSH
Trigger: ATGGCTGGGAGTCGGGGGCCACAGGCCTCTAGCTGT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp CTGGGGACGACTGCGAACGGGTGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACAAAGGAGCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LGTTANGWGLAR*WPDRSTKERCS
Trigger: GGAACACCGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 72 bp GTCGCAGTGCTGGGGACGACTGCGAACGGGTGGGGGTaGGCCAGGTTGTGGCCTGACAGGTCAACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VAVLGTTANGWG*ARLWPDRSTKE
Trigger: CTCCTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGTCCCCAGCACTGCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTGTTGTCGTTCTCTGTaGCTATGCCGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTCCRSL*LCRGRW
Trigger: CCACCTACCACGGCATAGTCACAGAGAACGACAACA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACCGACTCGGCGCTGGTaGTGTCATCCTCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEPTRRW*CHPLLR
Trigger: GCGAAGAAGAGGATGACATCACCAGCGCCGAGTCGG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLSSSWD*RARPGR
Trigger: TCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLDIPWA*ASVRCL
Trigger: TAGACAGCGGACAGACGCTCACGCCCAGGGGATGTC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGCCTCGCCAACATGGTaGAATCCCATCTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFASPTW*NPISQS
Trigger: GCTCTGTGAGATGGGATTTCACCATGTTGGCGAGGC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCCGGCCAACGCGCCGGTaGCCGGCTCATACTCAATCC +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSRPTRR*PAHTQS
Trigger: GGATTGAGTATGAGCCGGGCACCGGCGCGTTGGCCG...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGCTGCTCACTTCAATaGCCTTCTGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSCSLQ*PSAAGG
Trigger: CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGPPPPH*CAGPHR
Trigger: CCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCTCCCACTCCAGCTGCTaGTGCCGGGTTGCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EMVNGSLGLTDTTPSGILSHSSC*CRVAFW
Trigger: CCAGAACGCAACCCGGCAGCAGCAGCTGGAGTGGGA...GAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCATGGCTTTTCTGGAGTaGGAGGGGCCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFMAFLE*EGPVSS
Trigger: AGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCAT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCATCGCTCAGGCCTCCTaGCGTCTCCAAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGIAQAS*RLQKEW
Trigger: CCACTCCTTTTGGAGACGGCAGGAGGCCTGAGCGAT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTFLAPL*PVLRRL
Trigger: CAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFGILTA*VPLNSN
Trigger: GTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGTGATTCTTGAACTGTaGGGTCCTCAGCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGVILEL*GPQPRP
Trigger: GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCAC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCTCATCCACACCGAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCTGTCCTGATCCCGCATaGTCCGCCGATGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SHPHRDGERLFGADRHDACPDPA*SADVRP
Trigger: GGGCCGCACATCGGCGGACCATGCGGGATCAGGACA...GGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCGTCTCCAAAAGGAGTaGTCAGCCGGTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPRLQKE*SAGLQD
Trigger: GTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFTGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCACTGCTTCCCCTCGATaGCCGTGGCTTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSTASPR*PWLCRT
Trigger: AGTCCTACAAAGCCACGGTCATCGAGGGGAAGCAGT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGCCCCCACCACGAGCTaGGTTTCTATCTTGGATGGA +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSAPTTS*VSILDG
Trigger: TCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATGGTGTCCACGCCTGTaGAGGTCATGCCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEWCPRL*RSCPVQ
Trigger: CTGAACTGGGCATGACCTTCACAGGCGTGGACACCA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTAAIQL*ADELKL
Trigger: AAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGCACGGGTCAGTAGCTaGGGGTGGAGTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLARVSS*GWSHPT
Trigger: AGTGGGATGACTCCACCCTCAGCTACTGACCCGTGC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTTGTCTCCTTCTTCCTaGCGAATGGCCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLSPSS*RMAHVS
Trigger: TGAGACATGGGCCATTCGGCAGGAAGAAGGAGACAA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGGTCCAGCCCCTCCTTaGAGGTATACAGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSGPAPP*RYTDSR
Trigger: TCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAG +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGPGVGN*REFRYE
Trigger: CTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAACCTCCAGGCTCTCCTaGTCGTGGTTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAETSRLS*SWFSSS
Trigger: AGAGGAGCTGAACCACGAGCAGGAGAGCCTGGAGGT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEPPPPH*CAGPHR
Trigger: CCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTCTGCTGCTGCCGGGTTaGGTTCTGGGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSLLLPG*VLGVAL
Trigger: CAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAG...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GCCAGATTGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCCACTGCCCAGGGAGCTaGTGTCGGAGGAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ARLPRKNWVMCRSPPAEAHCPGS*CRRRSV
Trigger: CACACTCCTCCTCCGACAGCAGCTCCCTGGGCAGTG...GGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSGQPV*RTPLSF
Trigger: GAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCTCCAGGTGGATATTTaGAAAGACGGCCAACGCGCC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSLQVDI*KDGQRA
Trigger: GGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCTTTCCCTATGTGGCTaGTTTCTAGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLSLCG*FLAPLW
Trigger: CCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCACCTGGTCGCTGTCGTaGCCATTGTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGTWSLS*PLSVGR
Trigger: CCTGCCCACCGACAATGGCCACGACAGCGACCAGGT...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSGILTA*VPLNSN
Trigger: GTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGTGATTCTTGAACTGTaGGGTCCTCAGCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEVILEL*GPQPRP
Trigger: GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCAC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCGGTCAAGCAAGGACCTaGCATGCCAGTTCCGATAGC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSGQART*HASSDS
Trigger: GCTATCGGAACTGGCATGCCAGGTCCTTGCTTGACC...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCATGGGGTTGGCCGTGTaGATTACATTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFMGLAV*ITFTST
Trigger: GGTGGAGGTGAATGTAATCCACACGGCCAACCCCAT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGGTTGGCGTGTTCCATaGGGTTGGCCGTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGGWRVP*GWPCGL
Trigger: TAATCCACACGGCCAACCCCATGGAACACGCCAACC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHGWAAM*LACSMG
Trigger: CCCCATGGAACACGCCAACCACATGGCTGCCCAGCC...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTGTCCTGATCCCGCATaGTCCGCCGATGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGCPDPA*SADVRP
Trigger: GGGCCGCACATCGGCGGACCATGCGGGATCAGGACA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGAGCAGCGTCTTGCTaGAGGCAGCGGCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLRAASC*RQRQQL
Trigger: TAGTTGCTGCCGCTGCCTTCAGCAAGACGCTGCTCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361311.4
ENST00000377298.9
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTGTTGTCGTTCTCTGTaGCTATGCCGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPCCRSL*LCRGRW
Trigger: CCACCTACCACGGCATAGTCACAGAGAACGACAACA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAACTGCTTCCCCTCGATaGCCGTGGCTTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAETASPR*PWLCRT
Trigger: AGTCCTACAAAGCCACGGTCATCGAGGGGAAGCAGT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGGPWSS*GIHSGM
Trigger: CATCCCCGAGTGGATCCCTCAACTGGACCATGGGCC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACCTCTCCTGGACGTTCTaGGTACGGATCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHLSWTF*VRIAQA
Trigger: GGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAG...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGDIPWA*ASVRCL
Trigger: TAGACAGCGGACAGACGCTCACGCCCAGGGGATGTC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRRAATA*GHPLGV
Trigger: CACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACGCGCGGCGACAGCGTaGGGACATCCCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLRAATA*GHPLGV
Trigger: CACGCCCAGGGGATGTCCTCACGCTGTCGCCGCGCG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCATCCGGGATCCTCACTaGCTGGGTGCCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: EMVNGSLGLTDTTPSGILIRDPH*LGAVEL
Trigger: GAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGAT...GAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCAAAAACTGGGTCATGTaGAGGTCGCCACCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGKNWVM*RSPPAE
Trigger: CTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLSQPD*LGKTGS
Trigger: TGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGGTCCAGCCCCTCCTTaGAGGTATACAGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEGPAPP*RYTDSR
Trigger: TCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCGGATCTGCACGCCTCTaGCACTGTCTTCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: EMVNGSLGLTDTTPSGILGSARL*HCLRGP
Trigger: AGGTCCTCGAAGACAGTGGCAGAGGCGTGCAGATCC...GAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACAACTGGCTGGGGTGTaGTTGGATCTGCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLQLAGV*LDLHAS
Trigger: AGAGGCGTGCAGATCCAAGCACACCCCAGCCAGTTG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLPPPPH*CAGPHR
Trigger: CCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GCCAGATTGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCCTATGCCGTGGTAGGTaGGCTCCAGCCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARLPRKNWVMCRSPPAEALCRGR*APARAC
Trigger: ACAAGCCCTGGCTGGAGCCCACCTACCACGGCATAG...GGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSGSTRG*QQLGSA
Trigger: GGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCC...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTTGCCTCGGAAAAACTaGGTCATGTGCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPLPRKN*VMCRSP
Trigger: TGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GCCAGATTGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCTGGCTGGGGTGTGCTTaGATCTGCACGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ARLPRKNWVMCRSPPAEAWLGCA*ICTPLP
Trigger: TGGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCA...GGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGCTCGGGCAAAATGGTaGACGCCACTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLARAKW*TPLRLI
Trigger: GATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGGTTGGCGTGTTCCATaGGGTTGGCCGTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEGWRVP*GWPCGL
Trigger: TAATCCACACGGCCAACCCCATGGAACACGCCAACC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEGLARL*PDRSTK
Trigger: CTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCGAACGGGTGGGGGTTaGCCAGGTTGTGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGRTGGG*PGCGLT
Trigger: TGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp CCATGTCTCATCCACACCGAGATGGTGAACGGCTCTTaGGGGCTGACCGACACGACGCCATCCGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PCLIHTEMVNGS*GLTDTTPSGIL
Trigger: GAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 72 bp TCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTaGGCGTGTTCCATGGGGTTGGCCGTGTGGATTACA +
Preference number: 4 (lower is better)
Translates to: SGCTNCGWAAMW*ACSMGLAVWIT
Trigger: TGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAACTGCTTCCCCTCGATaGCCGTGGCTTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLTASPR*PWLCRT
Trigger: AGTCCTACAAAGCCACGGTCATCGAGGGGAAGCAGT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAESSEGS*RKRKIS
Trigger: GCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTCCTCGGACACCAGTaGTTCTTGAACTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLLLGHQ*FLNCGV
Trigger: GACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCATCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASFPVS*SRMVRR
Trigger: TCGGCGGACCATGCGGGATCAGGACACCGGGAAGGA...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSSSSWD*RARPGR
Trigger: TCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCT...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCACAAACGCGGGGCCTaGGGCGCTGGGAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRHKRGA*GAGRPL
Trigger: CAGGGGCCTCCCAGCGCCTCAGGCCCCGCGTTTGTG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCATTACCGGGTGGGAGTaGGCATGTTTTACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFITGWE*ACFTLC
Trigger: ACAAAGGGTAAAACATGCTCACTCCCACCCGGTAAT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGTGGGTTTTAGACCATaGCTGTTTGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTVGFRP*LFVCSP
Trigger: AGGAGAGCAAACAAACAGTCATGGTCTAAAACCCAC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCTCCACAAATCTCACCTaGAAATCGCAGAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGSTNLT*KSQRRI
Trigger: GATGCGCCTCTGCGATTTGCAGGTGAGATTTGTGGA...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361311.4
ENST00000650348.1
CDS-3UTR GCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCTTGTCTCCTTCTTCCTaGCGAATGGCCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFLSPSS*RMAHVS
Trigger: TGAGACATGGGCCATTCGGCAGGAAGAAGGAGACAA...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTCTTCCAGTGGAACTCTaGAGGTCTGTATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTLPVEL*RSVFLL
Trigger: GAGAAGAAATACAGACCTGCAGAGTTCCACTGGAAG...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGGGCTCGTGGGACGTaGCATCCACATAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLRARGT*HPHRES
Trigger: TGACTCTCTATGTGGATGGCACGTCCCACGAGCCCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGGTCCAGCCCCTCCTTaGAGGTATACAGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLGPAPP*RYTDSR
Trigger: TCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCTGTCTTCGAGGACCTaGAGGTCCAGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGLSSRT*RSSPSL
Trigger: CAAGGAGGGGCTGGACCTGCAGGTCCTCGAAGACAG...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFRYEMC*MALSNS
Trigger: GGAATTGGATAAGGCCATGCAGCACATCTCGTACCT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAGGAAGCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAG +
Preference number: 4 (lower is better)
Translates to: RCAARIRNTPRIIMNTRKPGVGN*REFRYE
Trigger: CTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGG...CTTCCTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGTCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: RSCPVQSCSLQCPSAAGGSMPFC*RRAMST
Trigger: GGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGA...CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGCTGGGAGGCCCCTGTaGGAGCCGGATGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSAGRPL*EPDGGQ
Trigger: CTGGCCGCCATCCGGCTCGCACAGGGGCCTCCCAGC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGGCGGGAAGAGCCCGTaGTCAGAGCTCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGGGKSP*SELRTS
Trigger: TGAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLSGQPV*RTPLSF
Trigger: GAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCGAGACTTTTTCACGTTaGTGCCATCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFETFSR*CHQVPS
Trigger: GGAAGGGACCTGATGGCACCAACGTGAAAAAGTCTC...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEFLAPL*PVLRRL
Trigger: CAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCAGCCTTTCCCTATGTaGCTGGTTTCTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGQPFPM*LVSSST
Trigger: AGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCAAGGTCAATACCAACTaGCTGGGGTGTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSKVNTN*LGCAWI
Trigger: GATCCAAGCACACCCCAGCCAGTTGGTATTGACCTT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSTRCAA*PYPIPR
Trigger: TCGGGGAATTGGATAAGGCCATGCAGCACATCTCGT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCGCTCGGGCAAAATGGTaGACGCCACTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSARAKW*TPLRLI
Trigger: GATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGC...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGGTCAAGCAAGGACCTaGCATGCCAGTTCCGATAGC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLGQART*HASSDS
Trigger: GCTATCGGAACTGGCATGCCAGGTCCTTGCTTGACC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCGTGTTCCATGGGGTTaGCCGTGTGGATTACATTCA +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPRVPWG*PCGLHS
Trigger: TGAATGTAATCCACACGGCCAACCCCATGGAACACG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTCCCCGAGGTCTTCTCCCTCCAAGGTCAATACCAACTGGCTGGGGTGTGCTTGCGAACGGGTGGGGGTTaGCCAGGTTGTGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: FPEVFSLQGQYQLAGVCLRTGGG*PGCGLT
Trigger: TGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCG...CAAGCACACCCCAGCCAGTTGGTATTGACCTTGGAGGGAGAAGACCTCGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGATCTCCCTCTGGGGTCTaGGGAGGGAGGACCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRSPSGV*GGRTRR
Trigger: CCGCCGGGTCCTCCCTCCCCAGACCCCAGAGGGAGA...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATCTCCCTCTGGGGTCTaGGGAGGGAGGACCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLSPSGV*GGRTRR
Trigger: CCGCCGGGTCCTCCCTCCCCAGACCCCAGAGGGAGA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCCGTCTCCAAAAGGAGTaGTCAGCCGGTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RSPRTPVILELWGPQPRPRLQKE*SAGLQD
Trigger: GTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACG...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTCCTCATCACAGACCTaGTTCAACTTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSSSQT*FNFQWN
Trigger: GTTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGTCATTTTCAACTCCTaGAAACTCTTGCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFVIFNS*KLLPAS
Trigger: GCTTGCTGGCAAGAGTTTTCAGGAGTTGAAAATGAC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCAAGGAACACCCCTTCTaGGCTTTCAAATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFKEHPF*AFKFRS
Trigger: GCTTCTGAATTTGAAAGCTCAGAAGGGGTGTTCCTT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASSSWD*RARPGR
Trigger: TCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAAGCCATACTCAGACCTaGGCAGGGGCTGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRSHTQT*AGAGAG
Trigger: CCCCGCCCCAGCCCCTGCTCAGGTCTGAGTATGGCT...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGCAGCAGCTCGGCAGTaGCCGCGGCCGCACCACAGA +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRAAARQ*PRPHHR
Trigger: TCTGTGGTGCGGCCGCGGGCACTGCCGAGCTGCTGC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATTGTCTCCTTCTTCCTaGCGAATGGCCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAELSPSS*RMAHVS
Trigger: TGAGACATGGGCCATTCGGCAGGAAGAAGGAGACAA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTGCTGCTGCCGGGTTaGGTTCTGGGGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECELLLPG*VLGVAL
Trigger: CAGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCACTCCAGCTGCTGCTaGCGGGTTGCGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAHSSCC*RVAFWG
Trigger: CCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTTCATCCCACTCCAGCTaGTGCTGCCGGGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSSSHSS*CCRVAF
Trigger: GAACGCAACCCGGCAGCAGCAGCTGGAGTGGGATGA...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAAT +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSWRGGV*TPTGRN
Trigger: ATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCA...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSSGQPV*RTPLSF
Trigger: GAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACT...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTATTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLFDFGP*VSPGRS
Trigger: AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAA...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAAAAACTGGGTCATGTaGAGGTCGCCACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLKNWVM*RSPPCQ
Trigger: CTGGCAAGGTGGCGACCTGCACATGACCCAGTTTTT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTATTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLFLAPL*PVLRRL
Trigger: CAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAA...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTGSTRG*QQLGSA
Trigger: GGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGCTGAGTTTCTATCTTaGATGGATGGAGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFAEFLS*MDGAGN
Trigger: ATTACCCGCTCCATCCATCCAAGATAGAAACTCAGC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTATTGCCTCGGAAAAACTaGGTCATGTGCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLLPRKN*VMCRSP
Trigger: TGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAA...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAAACCTCCTCGTAGCTaGCCATGGTGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGKPPRS*PWCPRL
Trigger: CAGGCGTGGACACCATGGCCAGCTACGAGGAGGTTT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCTCATCCACACCGAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SHPHRDGERLFGADRHDAGLARL*PDRSTK
Trigger: CTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCC...GGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACGAACGGGTGGGGGTTaGCCAGGTTGTGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMARTGGG*PGCGLT
Trigger: TGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATGTCCTGATCCCGCATaGTCCGCCGATGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTCPDPA*SADVRP
Trigger: GGGCCGCACATCGGCGGACCATGCGGGATCAGGACA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTGCCGGGTTGCGTTCTaGGGGTCGCCCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRCRVAF*GSPCSP
Trigger: GGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCCTTGAGGTCAGGAGTTaGAGACGAGCCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGLEVRS*RRASPT
Trigger: TGTTGGCGAGGCTCGTCTCCAACTCCTGACCTCAAG...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCATAGGCCTGGATGGTaGATGAATAGTCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGHRPGW*MNSLSA
Trigger: TGCAGAAAGACTATTCATTCACCATCCAGGCCTATG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACACTGTGGCCTGTACTaGGGCGACTGGCTCGTCACA +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAHCGLY*GDWLVT
Trigger: TGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLAAIQL*ADELKL
Trigger: AAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAGQVVA*QVNKGA
Trigger: CGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLSFPVS*SRMVRR
Trigger: TCGGCGGACCATGCGGGATCAGGACACCGGGAAGGA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCAAGGCTGCACACGGTaGGACCAGGCCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEQGCTR*DQATAQ
Trigger: CTGGGCAGTGGCCTGGTCTCACCGTGTGCAGCCTTG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAAAATTCCAGCACTTTaGCTTCGGGCCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLKIPAL*LRAMRL
Trigger: GAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTTTATCCACTACCACTaGATCAAAGGGGACATTCTG +
Preference number: 4 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFFIHYH*IKGDIL
Trigger: CAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAGGGCTCGTGGGACGTaGCATCCACATAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGRARGT*HPHRES
Trigger: TGACTCTCTATGTGGATGGCACGTCCCACGAGCCCT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAAT +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPFRYEM*CMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAA...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCTTCAAATTCAGAAGCTaGTCGGGCAAAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSFKFRS*SGKMVD
Trigger: GTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAA...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCTTCAAATTCAGAAGCTaGTCGGGCAAAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGFKFRS*SGKMVD
Trigger: GTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAA...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCATGGCTTTTCTGGAGTaGGAGGGGCCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGMAFLE*EGPVSS
Trigger: AGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCAT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATTTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHFDFGP*VSPGRS
Trigger: AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAA...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACACCTCAAAACTCTCTaGAAATCGCAGAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLHLKTL*KSQRRI
Trigger: GATGCGCCTCTGCGATTTGCAGAGAGTTTTGAGGTG...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377298.9
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGATGCAGGTCGCCACCTTaGCAGCAAGCCCCCACCACG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRCRSPP*QQAPTT
Trigger: CGTGGTGGGGGCTTGCTGGCAAGGTGGCGACCTGCA...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS-3UTR GCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCGCAGCAGCTCGGCAGTaGCCGCGGCCGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLAAARQ*PRPHLE
Trigger: CTCCAGGTGCGGCCGCGGGCACTGCCGAGCTGCTGC...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTATTGAACTCAAACACCTaGTCGCTGTCGTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLLNSNT*SLSWPL
Trigger: CAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAA...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMARLSCS*FSSSPS
Trigger: GGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCGAACGGGTGGGGGTTaGCCAGGTTGTGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRARTGGG*PGCGLT
Trigger: TGTCAGGCCACAACCTGGCCAACCCCCACCCGTTCG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATGTCCTGATCCCGCATaGTCCGCCGATGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLCPDPA*SADVRP
Trigger: GGGCCGCACATCGGCGGACCATGCGGGATCAGGACA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAVDPWD*ENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCAC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp GGGGAGGGGTCTGCACACCTACTGGCCGAAATGACTTaGTACATCGTGGACCCTTGGGACTGGGAGAACGGA +
Preference number: 4 (lower is better)
Translates to: GEGSAHLLAEMT*YIVDPWDWENG
Trigger: TCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGTGTGCAGACCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACGGCCTGGATGGTGAATaGATAGTCTTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHGLDGE*IVFLQL
Trigger: GAGCTGCAGAAAGACTATTCATTCACCATCCAGGCC...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACATAGGCCTGGATGGTaGATGAATAGTCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEHRPGW*MNSLSA
Trigger: TGCAGAAAGACTATTCATTCACCATCCAGGCCTATG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTACGGCTCTTTGGGGCTaGCCGACACGACGCCATCCG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRTALWG*PTRRHP
Trigger: CGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGSSEGS*RKRKIS
Trigger: GCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTGACACCAGTGATTCTTaGACTGTGGGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSDTSDS*TVGSSA
Trigger: GGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTC...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTCTCCCTCCACCGTaGCCTCACAGGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAPLPPP*PHRYPG
Trigger: ACCTGGATACCTGTGAGGTCACGGTGGAGGGAGAGG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACCTCTCCCTCCACCGTaGCCTCACAGGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTPLPPP*PHRYPG
Trigger: ACCTGGATACCTGTGAGGTCACGGTGGAGGGAGAGG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCGACTCGGCGCTGGTaGTGTCATCCTCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAPTRRW*CHPLLR
Trigger: GCGAAGAAGAGGATGACATCACCAGCGCCGAGTCGG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGCACGGGTCAGTAGCTaGGGGTGGAGTCATCCCACT +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTARVSS*GWSHPT
Trigger: AGTGGGATGACTCCACCCTCAGCTACTGACCCGTGC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSTYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCATTACCGGGTGGGAGTaGGCATGTTTTACCCTTTGT +
Preference number: 4 (lower is better)
Translates to: EMVNGSLGLTDTTPSGILITGWE*ACFTLC
Trigger: ACAAAGGGTAAAACATGCTCACTCCCACCCGGTAAT...GAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCAAGGCTGCACACGGTaGGACCAGGCCACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRQGCTR*DQATAQ
Trigger: CTGGGCAGTGGCCTGGTCTCACCGTGTGCAGCCTTG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCAAAATTCCAGCACTTTaGCTTCGGGCCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSKIPAL*LRAMRL
Trigger: GAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTT...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCTTTCTGACCTATCATaGGTATACACATCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPLSDLS*VYTSAK
Trigger: CTTCGCAGATGTGTATACTCATGATAGGTCAGAAAG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 4 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATCCAGCCAGGGCTTGTaGTTGTTAACTCGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSSQGL*LLTRAA
Trigger: GGCCGCGCGAGTTAACAAGCACAAGCCCTGGCTGGA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp GTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATAAAATGCTGTCGTACTaGTTCCCCTCGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: VFRVHELWLGSHVVGVFHKMLSY*FPSMTV
Trigger: CACGGTCATCGAGGGGAAGCAGTACGACAGCATTTT...ATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCGGCCAACGCGCCGGTaGCCGGCTCATACTCAATCC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSRPTRR*PAHTQS
Trigger: GGATTGAGTATGAGCCGGGCACCGGCGCGTTGGCCG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAATCCGGGATCCTCACTaGCTGGGTGCCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAIRDPH*LGAVEL
Trigger: GAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGAT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAACTTCCAGTGGAACTCTaGAGGTCTGTATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAELPVEL*RSVFLL
Trigger: GAGAAGAAATACAGACCTGCAGAGTTCCACTGGAAG...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGTGCAGGTCGCCACCTaGAGAGGCCACAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEVQVAT*RGHSHR
Trigger: CCTGTGACTGTGGCCTCTGCAGGTGGCGACCTGCAC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAAAAACTGGGTCATGTaGAGGTCGCCACCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGKNWVM*RSPPAE
Trigger: CTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTGTCTTCGAGGACCTaGAGGTCCAGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTLSSRT*RSSPSL
Trigger: CAAGGAGGGGCTGGACCTGCAGGTCCTCGAAGACAG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLRYEMC*MALSNS
Trigger: GGAATTGGATAAGGCCATGCAGCACATCTCGTACCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCCGGGCGTGGGGAACTaGCGGGAGTTCAGGTACGAG +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSPGVGN*REFRYE
Trigger: CTCGTACCTGAACTCCCGGCAGTTCCCCACGCCCGG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSMPFC*RRAMST
Trigger: GGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAAGCTGCTCACTTCAATaGCCTTCTGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASCSLQ*PSAAGG
Trigger: CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEERCSG*TNCGWA
Trigger: TGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRERCSG*TNCGWA
Trigger: TGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACATGGTCCGCCGATGTaGGGCCCGGATCCGAAATAC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTHGPPM*GPDPKY
Trigger: GTATTTCGGATCCGGGCCGCACATCGGCGGACCATG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCACTCCAGCTGCTGCTaGCGGGTTGCGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRHSSCC*RVAFWG
Trigger: CCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAAT +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTWRGGV*TPTGRN
Trigger: ATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACACTGCCCAGGGAGCTaGTGTCGGAGGAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRHCPGS*CRRRSV
Trigger: CACACTCCTCCTCCGACAGCAGCTCCCTGGGCAGTG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGFDFGP*VSPGRS
Trigger: AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCCTTTCCCTATGTGGCTaGTTTCTAGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGLSLCG*FLAPLW
Trigger: CCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAG...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAACCTGGTCGCTGTCGTaGCCATTGTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLTWSLS*PLSVGR
Trigger: CCTGCCCACCGACAATGGCCACGACAGCGACCAGGT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCTTGAACTCAAACACCTaGTCGCTGTCGTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: GVGNCREFRYEMCCMALSLNSNT*SLSWPL
Trigger: CAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAA...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAESFYLG*MERVIL
Trigger: GAGGATTACCCGCTCCATCCATCCAAGATAGAAACT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGCTGAGTTTCTATCTTaGATGGATGGAGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEAEFLS*MDGAGN
Trigger: ATTACCCGCTCCATCCATCCAAGATAGAAACTCAGC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCAAGGTCAATACCAACTaGCTGGGGTGTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: RSPRTPVILELWGPQPRPKVNTN*LGCAWI
Trigger: GATCCAAGCACACCCCAGCCAGTTGGTATTGACCTT...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTGCGAATTCCGGGCGTaGGGAACTGCCGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRACEFRA*GTAGSS
Trigger: TGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGTGATTCTTGAACTGTaGGGTCCTCAGCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAVILEL*GPQPRP
Trigger: GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCAC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRARLSCS*FSSSPS
Trigger: GGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCCGTGTTCCATGGGGTTaGCCGTGTGGATTACATTCA +
Preference number: 4 (lower is better)
Translates to: RSPRTPVILELWGPQPRPRVPWG*PCGLHS
Trigger: TGAATGTAATCCACACGGCCAACCCCATGGAACACG...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGGGCAGCCATGTGGTTaGCGTGTTCCATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTGQPCG*RVPWGW
Trigger: CCAACCCCATGGAACACGCCAACCACATGGCTGCCC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEGWAAM*LACSMG
Trigger: CCCCATGGAACACGCCAACCACATGGCTGCCCAGCC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACGACTGCGAACGGGTaGGGGTTGGCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETTANG*GLARLW
Trigger: CCACAACCTGGCCAACCCCCACCCGTTCGCAGTCGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCAACTGTCGCAGTGCTaGGGACGACTGCGAACGGGT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAQLSQC*GRLRTG
Trigger: ACCCGTTCGCAGTCGTCCCCAGCACTGCGACAGTTG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCCTGTGCGAGCCGGATaGCGGCCAGAGAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRPVRAG*RPERTC
Trigger: ACACGTCCTCTCTGGCCGCCATCCGGCTCGCACAGG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAGGAAGAAGCAGCAGGGCTCCTaGGGGAGAGGGATTTCAACC +
Preference number: 4 (lower is better)
Translates to: RCAARIRNTPRIIMNTRKKQQGS*GRGIST
Trigger: GGTTGAAATCCCTCTCCCCCAGGAGCCCTGCTGCTT...CTTCCTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 72 bp GCGAGTTTCCCGGAACGGAGAGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: ASFPERRVKPAR*PRKNWVMCRSP
Trigger: TGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCGTTCCGGGAAACTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGGCCTGGATGGTGAATaGATAGTCTTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGGLDGE*IVFLQL
Trigger: GAGCTGCAGAAAGACTATTCATTCACCATCCAGGCC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRGPWSS*GIHSGM
Trigger: CATCCCCGAGTGGATCCCTCAACTGGACCATGGGCC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GCCAGATTGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCTCCTCATCACAGACCTaGTTCAACTTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ARLPRKNWVMCRSPPAEASSSQT*FNFQWN
Trigger: GTTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGA...GGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACTCCTCGGACACCAGTaGTTCTTGAACTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMALLGHQ*FLNCGV
Trigger: GACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTCCTTCCCGGTGTCCTaGTCCCGCATGGTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQSFPVS*SRMVRR
Trigger: TCGGCGGACCATGCGGGATCAGGACACCGGGAAGGA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGTYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTAGCTCCTCGTGGGACTaGAGAGCGCGACCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRSSSWD*RARPGR
Trigger: TCTGCCTGGTCGCGCTCTTCAGTCCCACGAGGAGCT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAAAATTCCAGCACTTTaGCTTCGGGCCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGKIPAL*LRAMRL
Trigger: GAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCCAGCCAGGGCTTGTaGTTGTTAACTCGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESSQGL*LLTRAA
Trigger: GGCCGCGCGAGTTAACAAGCACAAGCCCTGGCTGGA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACACTGTTGTTCCATCCTTaGCACCCAGGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTLLFHP*HPGVQV
Trigger: CACCTGCACCCCTGGGTGGCAAGGATGGAACAACAG...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCGGCCAACGCGCCGGTaGCCGGCTCATACTCAATCC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQRPTRR*PAHTQS
Trigger: GGATTGAGTATGAGCCGGGCACCGGCGCGTTGGCCG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTATCCGGGATCCTCACTaGCTGGGTGCCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAIRDPH*LGAVEL
Trigger: GAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGAT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTGTCTCCTTCTTCCTaGCGAATGGCCCATGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGLSPSS*RMAHVS
Trigger: TGAGACATGGGCCATTCGGCAGGAAGAAGGAGACAA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACTGTCTTCGAGGACCTaGAGGTCCAGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLLSSRT*RSSPSL
Trigger: CAAGGAGGGGCTGGACCTGCAGGTCCTCGAAGACAG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGGATCTGCACGCCTCTaGCACTGTCTTCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAGSARL*HCLRGP
Trigger: AGGTCCTCGAAGACAGTGGCAGAGGCGTGCAGATCC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCAGGTATCCAGGTCGTaGACGATCTCCTCGGACACC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAQVSRS*TISSDT
Trigger: GGTGTCCGAGGAGATCGTGCACGACCTGGATACCTG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAACCTCCAGGCTCTCCTaGTCGTGGTTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTTSRLS*SWFSSS
Trigger: AGAGGAGCTGAACCACGAGCAGGAGAGCCTGGAGGT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGAGCGGTGTTCCGGGTaGACGAACTGTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSERCSG*TNCGWA
Trigger: TGCCCAGCCACAGTTCGTGCACCCGGAACACCGCTC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATCACAACTGTCGCAGTaGTGGGGACGACTGCGAACG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSQLSQ*WGRLRT
Trigger: CGTTCGCAGTCGTCCCCAGCACTGCGACAGTTGTGA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACATGGTCCGCCGATGTaGGGCCCGGATCCGAAATAC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRHGPPM*GPDPKY
Trigger: GTATTTCGGATCCGGGCCGCACATCGGCGGACCATG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAPPPPH*CAGPHR
Trigger: CCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGGCGGGAAGAGCCCGTaGTCAGAGCTCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLGGKSP*SELRTS
Trigger: TGAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGTGAGACCAGGCCACTaGCCAGGGAGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPVRPGH*PGSCCR
Trigger: CCGACAGCAGCTCCCTGGGCAGTGGCCTGGTCTCAC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTATCGCTCAGGCCTCCTaGCGTCTCCAAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAIAQAS*RLQKEW
Trigger: CCACTCCTTTTGGAGACGGCAGGAGGCCTGAGCGAT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CACAGGTATCCAGGTCGTGCACGATCTCCTCGGACACCAGTGATTCTTGAACTGATCGCTCAGGCCTCCTaGCGTCTCCAAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HRYPGRARSPRTPVILELIAQAS*RLQKEW
Trigger: CCACTCCTTTTGGAGACGGCAGGAGGCCTGAGCGAT...CAGTTCAAGAATCACTGGTGTCCGAGGAGATCGTGCACGACCTGGATACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPGSTRG*QQLGSA
Trigger: GGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCGTGGCCATTGTCGGTaGGCAGGCCCATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRRGHCR*AGPWSS
Trigger: ACTGGACCATGGGCCTGCCCACCGACAATGGCCACG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTACCTGGTCGCTGTCGTaGCCATTGTCGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRTWSLS*PLSVGR
Trigger: CCTGCCCACCGACAATGGCCACGACAGCGACCAGGT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGCTGAGTTTCTATCTTaGATGGATGGAGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLAEFLS*MDGAGN
Trigger: ATTACCCGCTCCATCCATCCAAGATAGAAACTCAGC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTCAATACCAACTGGCTaGGGTGTGCTTGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGSIPTG*GVLGSA
Trigger: TGCAGATCCAAGCACACCCCAGCCAGTTGGTATTGA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAAGGTCAATACCAACTaGCTGGGGTGTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGKVNTN*LGCAWI
Trigger: GATCCAAGCACACCCCAGCCAGTTGGTATTGACCTT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRAARAK*WTPLRL
Trigger: CAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGCTGCTCGGGCAAAATaGTGGACGCCACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLAARAK*WTPLRL
Trigger: CAGCCTGAGTGGCGTCCACCATTTTGCCCGAGCAGC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAAGGCTCTCCTGCTCGTaGTTCAGCTCCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLRLSCS*FSSSPS
Trigger: GGAGGGAGAGGAGCTGAACCACGAGCAGGAGAGCCT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAAAACCTCCTCGTAGCTaGCCATGGTGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTKPPRS*PWCPRL
Trigger: CAGGCGTGGACACCATGGCCAGCTACGAGGAGGTTT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACGGGTGCACGAACTGTaGCTGGGCAGCCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLRVHEL*LGSHVV
Trigger: AACCACATGGCTGCCCAGCCACAGTTCGTGCACCCG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRVDPWD*ENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCAC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAGGAAGTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 4 (lower is better)
Translates to: RCAARIRNTPRIIMNTRKYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...CTTCCTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGCACAGCGACGATCGTaGCGGGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPAQRRS*RGGVCT
Trigger: TGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp GGCTGGGCAGCCATGTGGTTGGCGTGTTCCATGGGGTaGGCCGTGTGGATTACATTCACCTCCACCTTAAAT +
Preference number: 4 (lower is better)
Translates to: GWAAMWLACSMG*AVWITFTSTLN
Trigger: ATTTAAGGTGGAGGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAACCACATGGCTGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCACTGTGGCCTGTACTaGGGCGACTGGCTCGTCACA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSHCGLY*GDWLVT
Trigger: TGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCTGCCTGGGTGCCGTTaGACTCAAACACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSLPGCR*TQTPGR
Trigger: GCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGCCCCCACCACGAGCTaGGTTTCTATCTTGGATGGA +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAAPTTS*VSILDG
Trigger: TCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGTCATTTTCAACTCCTaGAAACTCTTGCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHVIFNS*KLLPAS
Trigger: GCTTGCTGGCAAGAGTTTTCAGGAGTTGAAAATGAC...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCCTCTCCCTCCACCGTaGCCTCACAGGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRPLPPP*PHRYPG
Trigger: ACCTGGATACCTGTGAGGTCACGGTGGAGGGAGAGG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSGQVVA*QVNKGA
Trigger: CGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCCGACTCGGCGCTGGTaGTGTCATCCTCTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRPTRRW*CHPLLR
Trigger: GCGAAGAAGAGGATGACATCACCAGCGCCGAGTCGG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCTCTCCTGGACGTTCTaGGTACGGATCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRLSWTF*VRIAQA
Trigger: GGCCTGAGCGATCCGTACTCAGAACGTCCAGGAGAG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTAAAACACTTGATTGTGCTGGTGATTTTGAGTCTGCGAATTCCGGGCGTGGGGGACATCCCCTGGGCGTaGGCGTCTGTCCGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LKHLIVLVILSLRIPGVGDIPWA*ASVRCL
Trigger: TAGACAGCGGACAGACGCTCACGCCCAGGGGATGTC...CCCCACGCCCGGAATTCGCAGACTCAAAATCACCAGCACAATCAAGTGTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTACTTTTTCACGTTGGTaGCATCAGGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSTFSRW*HQVPSH
Trigger: GTGGGAAGGGACCTGATGGCACCAACGTGAAAAAGT...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACTGTTGTTCCATCCTTaGCACCCAGGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLLLFHP*HPGVQV
Trigger: CACCTGCACCCCTGGGTGGCAAGGATGGAACAACAG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTAGGGCTCGTGGGACGTaGCATCCACATAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRARARGT*HPHRES
Trigger: TGACTCTCTATGTGGATGGCACGTCCCACGAGCCCT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGGATCTGCACGCCTCTaGCACTGTCTTCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLGSARL*HCLRGP
Trigger: AGGTCCTCGAAGACAGTGGCAGAGGCGTGCAGATCC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACAGGTATCCAGGTCGTaGACGATCTCCTCGGACACC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRQVSRS*TISSDT
Trigger: GGTGTCCGAGGAGATCGTGCACGACCTGGATACCTG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCACAACTGTCGCAGTaGTGGGGACGACTGCGAACG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESQLSQ*WGRLRT
Trigger: CGTTCGCAGTCGTCCCCAGCACTGCGACAGTTGTGA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCATGGTCCGCCGATGTaGGGCCCGGATCCGAAATAC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRHGPPM*GPDPKY
Trigger: GTATTTCGGATCCGGGCCGCACATCGGCGGACCATG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCACTCCAGCTGCTGCTaGCGGGTTGCGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQHSSCC*RVAFWG
Trigger: CCCCCAGAACGCAACCCGGCAGCAGCAGCTGGAGTG...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCGTGGCCATTGTCGGTaGGCAGGCCCATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPRGHCR*AGPWSS
Trigger: ACTGGACCATGGGCCTGCCCACCGACAATGGCCACG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCGTGGCCATTGTCGGTaGGCAGGCCCATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQRGHCR*AGPWSS
Trigger: ACTGGACCATGGGCCTGCCCACCGACAATGGCCACG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTTGGCTGGGGTGTGCTTaGATCTGCACGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSWLGCA*ICTPLP
Trigger: TGGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCA...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTGCGAATTCCGGGCGTaGGGAACTGCCGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRCEFRA*GTAGSS
Trigger: TGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTCGGGCAAAATGGTaGACGCCACTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRARAKW*TPLRLI
Trigger: GATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTGATTCTTGAACTGTaGGGTCCTCAGCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRVILEL*GPQPRP
Trigger: GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCAC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAAACCTCCTCGTAGCTaGCCATGGTGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEKPPRS*PWCPRL
Trigger: CAGGCGTGGACACCATGGCCAGCTACGAGGAGGTTT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGGTTGGCGTGTTCCATaGGGTTGGCCGTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTGWRVP*GWPCGL
Trigger: TAATCCACACGGCCAACCCCATGGAACACGCCAACC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGGGCAGCCATGTGGTTaGCGTGTTCCATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSGQPCG*RVPWGW
Trigger: CCAACCCCATGGAACACGCCAACCACATGGCTGCCC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGGCTGGGCAGCCATGTaGTTGGCGTGTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPGWAAM*LACSMG
Trigger: CCCCATGGAACACGCCAACCACATGGCTGCCCAGCC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTGLARL*PDRSTK
Trigger: CTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAAGCAGAAACCGAGGTaGCCGGGGGCACGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQKQKPR*PGARVS
Trigger: ACTGACCCGTGCCCCCGGCCACCTCGGTTTCTGCTT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCGTCTCCAAAAGGAGTaGTCAGCCGGTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECERLQKE*SAGLQD
Trigger: GTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAAGCAGCAGGGCTCCTaGGGGAGAGGGATTTCAACC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEKQQGS*GRGIST
Trigger: GGTTGAAATCCCTCTCCCCCAGGAGCCCTGCTGCTT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp GTGGCCTCGTTAAAACACTTGATTGTGCTGGTGATTTaGAGTCTGCGAATTCCGGGCGTGGGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: VASLKHLIVLVI*SLRIPGVGNCR
Trigger: CCGGCAGTTCCCCACGCCCGGAATTCGCAGACTCAAAATCACCAGCACAATCAAGTGTTTTAACGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTAGAGCAGCGTCTTGCTaGAGGCAGCGGCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRRAASC*RQRQQL
Trigger: TAGTTGCTGCCGCTGCCTTCAGCAAGACGCTGCTCT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361311.4
ENST00000377298.9
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGGCCTGGATGGTGAATaGATAGTCTTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAGLDGE*IVFLQL
Trigger: GAGCTGCAGAAAGACTATTCATTCACCATCCAGGCC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp CACAGGTATCCAGGTCGTGCACGATCTCCTCGGACACCAGTGATTCTTGAACTGTGTAGGACTTCTCCTTaGACACGGGCGCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: HRYPGRARSPRTPVILELCRTSP*TRARTH
Trigger: ATGAGTACGCGCCCGTGTTCAAGGAGAAGTCCTACA...CAGTTCAAGAATCACTGGTGTCCGAGGAGATCGTGCACGACCTGGATACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCACAGTCATAGGCAGTaGCGGTCAGCTTATATTGAT +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGHSHRQ*RSAYID
Trigger: ATCAATATAAGCTGACCGTCACTGCCTATGACTGTG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSVEGLL*VGVSVA
Trigger: TGCGACCGAGACACCTACTCAGAGAAGTCCCTCCAC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGCCCCCACCACGAGCTaGGTTTCTATCTTGGATGGA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEAPTTS*VSILDG
Trigger: TCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACTCCTCGGACACCAGTaGTTCTTGAACTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRLLGHQ*FLNCGV
Trigger: GACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACTCCTCGGACACCAGTaGTTCTTGAACTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLLLGHQ*FLNCGV
Trigger: GACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTTGGTGTCCACGCCTGTaGAGGTCATGCCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSWCPRL*RSCPVQ
Trigger: CTGAACTGGGCATGACCTTCACAGGCGTGGACACCA...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAAAIQL*ADELKL
Trigger: AAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGTGGGTTTTAGACCATaGCTGTTTGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGVGFRP*LFVCSP
Trigger: AGGAGAGCAAACAAACAGTCATGGTCTAAAACCCAC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 4 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHSGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCAGGTATCCAGGTCGTaGACGATCTCCTCGGACACC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSQVSRS*TISSDT
Trigger: GGTGTCCGAGGAGATCGTGCACGACCTGGATACCTG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQSMPFC*RRAMST
Trigger: GGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGTCATCCCACTCCAGCTaGTGCTGCCGGGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPSSHSS*CCRVAF
Trigger: GAACGCAACCCGGCAGCAGCAGCTGGAGTGGGATGA...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGTGGCGGGGAGGGGTCTaGACACCTACTGGCCGAAAT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPWRGGV*TPTGRN
Trigger: ATTTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCA...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACATTTGACTTCGGGCCATaGGTCTCTCCTGGACGTTCT +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTFDFGP*VSPGRS
Trigger: AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAA...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCTCCAGGTGGATATTTaGAAAGACGGCCAACGCGCC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECELQVDI*KDGQRA
Trigger: GGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCACTTTCCCTATGTGGCTaGTTTCTAGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMALSLCG*FLAPLW
Trigger: CCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAG...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEGILTA*VPLNSN
Trigger: GTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGSFYLG*MERVIL
Trigger: GAGGATTACCCGCTCCATCCATCCAAGATAGAAACT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGAACACCAGGAAGTCAATACCAACTGGCTaGGGTGTGCTTGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: RCAARIRNTPRIIMNTRKSIPTG*GVLGSA
Trigger: TGCAGATCCAAGCACACCCCAGCCAGTTGGTATTGA...CTTCCTGGTGTTCATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGCTCGGGCAAAATGGTaGACGCCACTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSARAKW*TPLRLI
Trigger: GATCAGCCTGAGTGGCGTCCACCATTTTGCCCGAGC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGGTCAAGCAAGGACCTaGCATGCCAGTTCCGATAGC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLGQART*HASSDS
Trigger: GCTATCGGAACTGGCATGCCAGGTCCTTGCTTGACC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAATGGGGTTGGCCGTGTaGATTACATTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTMGLAV*ITFTST
Trigger: GGTGGAGGTGAATGTAATCCACACGGCCAACCCCAT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCGGGTGCACGAACTGTaGCTGGGCAGCCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPRVHEL*LGSHVV
Trigger: AACCACATGGCTGCCCAGCCACAGTTCGTGCACCCG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGTTGGCCAGGTTGTaGCCTGACAGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEGLARL*PDRSTK
Trigger: CTTTGTTGACCTGTCAGGCCACAACCTGGCCAACCC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RARAQSSELHFTFQSRVTDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGTGGACCCTTGGGACTaGGAGAACGGATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPVDPWD*ENGWQQ
Trigger: CTGCTGCCATCCGTTCTCCCAGTCCCAAGGGTCCAC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSLAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGGTCGGAGGAGGAGTGTaGAAAAGGGGCCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQVGGGV*KRGQGP
Trigger: GGGTCCCTGGCCCCTTTTCCACACTCCTCCTCCGAC...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTAAGCAGCAGGGCTCCTaGGGGAGAGGGATTTCAACC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSKQQGS*GRGIST
Trigger: GGTTGAAATCCCTCTCCCCCAGGAGCCCTGCTGCTT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTCTCTTTGGAGCGAATaGCTCCCTCACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRASLWSE*LPHQWI
Trigger: AATCCACTGGTGAGGGAGTCATTCGCTCCAAAGAGA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTGTAGGACTTCTCCTTaGACACGGGCGCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECECRTSP*TRARTH
Trigger: ATGAGTACGCGCCCGTGTTCAAGGAGAAGTCCTACA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGATCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRSSEGS*RKRKIS
Trigger: GCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGA...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCATCGGGAATTCTACATTaGGGACGTAGTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMASGILH*GRSGAI
Trigger: AATGGCACCACTACGTCCTCAATGTAGAATTCCCGA...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGCGGCCATTCAGCTCTaGGCAGATGAGCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAAAIQL*ADELKL
Trigger: AAGTTTAAGCTCATCTGCTCAGAGCTGAATGGCCGC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCCTGATCCAGTCTCTTaGGCAGCACAGCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQPDPVS*AAQLEA
Trigger: GGCCTCTAGCTGTGCTGCTCAAGAGACTGGATCAGG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTAAAATGCTGTCGTACTaGTTCCCCTCGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAKMLSY*FPSMTV
Trigger: CACGGTCATCGAGGGGAAGCAGTACGACAGCATTTT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACCTCCACCCTCAAAATaGTGTCGTACTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLPPPSK*CRTASP
Trigger: AGGGGAAGCAGTACGACAGCATTTTGAGGGTGGAGG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACCTCCACCCTCAAAATaGTGTCGTACTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRPPPSK*CRTASP
Trigger: AGGGGAAGCAGTACGACAGCATTTTGAGGGTGGAGG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCTGTTGTTCCATCCTTaGCACCCAGGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQLLFHP*HPGVQV
Trigger: CACCTGCACCCCTGGGTGGCAAGGATGGAACAACAG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAAAAAACTGGGTCATGTaGAGGTCGCCACCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLKNWVM*RSPPAE
Trigger: CTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTGGTCCAGCCCCTCCTTaGAGGTATACAGACAGTCGA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSGPAPP*RYTDSR
Trigger: TCGACTGTCTGTATACCTGCAAGGAGGGGCTGGACC...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGGATCTGCACGCCTCTaGCACTGTCTTCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQGSARL*HCLRGP
Trigger: AGGTCCTCGAAGACAGTGGCAGAGGCGTGCAGATCC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAACTGGCTGGGGTGTaGTTGGATCTGCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQQLAGV*LDLHAS
Trigger: AGAGGCGTGCAGATCCAAGCACACCCCAGCCAGTTG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGTATCCAGGTCGTaGACGATCTCCTCGGACACC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQQVSRS*TISSDT
Trigger: GGTGTCCGAGGAGATCGTGCACGACCTGGATACCTG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGACCTCCAGGCTCTCCTaGTCGTGGTTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQTSRLS*SWFSSS
Trigger: AGAGGAGCTGAACCACGAGCAGGAGAGCCTGGAGGT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCAGCCTTTCCCTATGTaGCTGGTTTCTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAQPFPM*LVSSST
Trigger: AGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTTGAACTCAAACACCTaGTCGCTGTCGTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALNSNT*SLSWPL
Trigger: CAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGACTGGGAGAACGGATaGCAGCAGAGTCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEDWENG*QQSLRK
Trigger: CTTTCGAAGACTCTGCTGCCATCCGTTCTCCCAGTC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSTGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQVEGLL*VGVSVA
Trigger: TGCGACCGAGACACCTACTCAGAGAAGTCCCTCCAC...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCCTCAGAAGGATCCTaGCGGAAGAGGAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRSSEGS*RKRKIS
Trigger: GCTGATCTTCCTCTTCCGTCAGGATCCTTCTGAGGA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTCGGGAATTCTACATTaGGGACGTAGTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRASGILH*GRSGAI
Trigger: AATGGCACCACTACGTCCTCAATGTAGAATTCCCGA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGACACCAGTGATTCTTaGACTGTGGGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQDTSDS*TVGSSA
Trigger: GGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAAAATTCCAGCACTTTaGCTTCGGGCCATGCGTCTC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEKIPAL*LRAMRL
Trigger: GAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHEQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAACTTTTTCACGTTGGTaGCATCAGGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRTFSRW*HQVPSH
Trigger: GTGGGAAGGGACCTGATGGCACCAACGTGAAAAAGT...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAACTTTTTCACGTTGGTaGCATCAGGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLTFSRW*HQVPSH
Trigger: GTGGGAAGGGACCTGATGGCACCAACGTGAAAAAGT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGAGGGCTCGTGGGACGTaGCATCCACATAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPRARGT*HPHRES
Trigger: TGACTCTCTATGTGGATGGCACGTCCCACGAGCCCT...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALSQPD*LGKTGS
Trigger: TGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CACAGGTATCCAGGTCGTGCACGATCTCCTCGGACACCAGTGATTCTTGAACTGAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: HRYPGRARSPRTPVILELRYEMC*MALSNS
Trigger: GGAATTGGATAAGGCCATGCAGCACATCTCGTACCT...CAGTTCAAGAATCACTGGTGTCCGAGGAGATCGTGCACGACCTGGATACCTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCATTCAGGTACGAGATGTaGTGCATGGCCTTATCCAAT +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAFRYEM*CMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAA...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCAGCTGCTCACTTCAATaGCCTTCTGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLSCSLQ*PSAAGG
Trigger: CCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCT...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGAGTGGTCAGCCGGTCTaGAGGACACCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPSGQPV*RTPLSF
Trigger: GAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACT...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTATGAGTATACACATCTaGGAAGGGAAACCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSMSIHI*EGKPRG
Trigger: GCCGCGCGGTTTCCCTTCGCAGATGTGTATACTCAT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCTCCAGGTGGATATTTaGAAAGACGGCCAACGCGCC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQLQVDI*KDGQRA
Trigger: GGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACTTTCCCTATGTGGCTaGTTTCTAGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRLSLCG*FLAPLW
Trigger: CCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACAGCCTTTCCCTATGTaGCTGGTTTCTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLQPFPM*LVSSST
Trigger: AGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPGILTA*VPLNSN
Trigger: GTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCAATACCAACTGGCTaGGGTGTGCTTGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESIPTG*GVLGSA
Trigger: TGCAGATCCAAGCACACCCCAGCCAGTTGGTATTGA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETRCAA*PYPIPR
Trigger: TCGGGGAATTGGATAAGGCCATGCAGCACATCTCGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTATGGGGTTGGCCGTGTaGATTACATTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSMGLAV*ITFTST
Trigger: GGTGGAGGTGAATGTAATCCACACGGCCAACCCCAT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACGTGTTCCATGGGGTTaGCCGTGTGGATTACATTCA +
Preference number: 4 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRRVPWG*PCGLHS
Trigger: TGAATGTAATCCACACGGCCAACCCCATGGAACACG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACGTGTTCCATGGGGTTaGCCGTGTGGATTACATTCA +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLRVPWG*PCGLHS
Trigger: TGAATGTAATCCACACGGCCAACCCCATGGAACACG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTGCCGGGTTGCGTTCTaGGGGTCGCCCTGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNICRVAF*GSPCSP
Trigger: GGGGGAGCAGGGCGACCCCCAGAACGCAACCCGGCA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGTACATCGTGGACCCTTaGGACTGGGAGAACGGATGG +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPYIVDP*DWENGW
Trigger: CCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTA...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGTCAACGAGCCCAGCTaGCATGGCTTTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQVNEPS*HGFSGV
Trigger: CACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGAC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGACGGGACATGGAGGATaGCCACACATAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQTGHGG*PHIAQP
Trigger: TGGCTGTGCTATGTGTGGCCATCCTCCATGTCCCGT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
3UTR CAA 72 bp AATGATTACCGGGTGGGAGTGAGCATGTTTTACCCTTaGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NDYRVGVSMFYP*STSPAGMAFLE
Trigger: CTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGGTAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTGTAGGACTTCTCCTTaGACACGGGCGCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQCRTSP*TRARTH
Trigger: ATGAGTACGCGCCCGTGTTCAAGGAGAAGTCCTACA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCCTCATCACAGACCTaGTTCAACTTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESSSQT*FNFQWN
Trigger: GTTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATCCTCATCACAGACCTaGTTCAACTTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLSSSQT*FNFQWN
Trigger: GTTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTACCTACTGGCCGAAATaGCTTTGTACATCGTGGACC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSTYWPK*LCTSWT
Trigger: GGTCCACGATGTACAAAGTCATTTCGGCCAGTAGGT...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCCTCCACCCTCAAAATaGTGTCGTACTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPPPPSK*CRTASP
Trigger: AGGGGAAGCAGTACGACAGCATTTTGAGGGTGGAGG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCTTCCAGTGGAACTCTaGAGGTCTGTATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALPVEL*RSVFLL
Trigger: GAGAAGAAATACAGACCTGCAGAGTTCCACTGGAAG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGGTACGAGATGTGCTaGATGGCCTTATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECERYEMC*MALSNS
Trigger: GGAATTGGATAAGGCCATGCAGCACATCTCGTACCT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAAT +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAFRYEM*CMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGAGACTTTTTCACGTTaGTGCCATCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRETFSR*CHQVPS
Trigger: GGAAGGGACCTGATGGCACCAACGTGAAAAAGTCTC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQFLAPL*PVLRRL
Trigger: CAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGTTGCCTCGGAAAAACTaGGTCATGTGCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQLPRKN*VMCRSP
Trigger: TGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAA...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGTTGCCTCGGAAAAACTaGGTCATGTGCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPLPRKN*VMCRSP
Trigger: TGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAA...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTAAGGTCAATACCAACTaGCTGGGGTGTGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRKVNTN*LGCAWI
Trigger: GATCCAAGCACACCCCAGCCAGTTGGTATTGACCTT...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGGGTCAAGCAAGGACCTaGCATGCCAGTTCCGATAGC +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQGQART*HASSDS
Trigger: GCTATCGGAACTGGCATGCCAGGTCCTTGCTTGACC...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGTCTCTTTGGAGCGAATaGCTCCCTCACCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPSLWSE*LPHQWI
Trigger: AATCCACTGGTGAGGGAGTCATTCGCTCCAAAGAGA...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCACAGTCATAGGCAGTaGCGGTCAGCTTATATTGAT +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEHSHRQ*RSAYID
Trigger: ATCAATATAAGCTGACCGTCACTGCCTATGACTGTG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTTCGGGAATTCTACATTaGGGACGTAGTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSSGILH*GRSGAI
Trigger: AATGGCACCACTACGTCCTCAATGTAGAATTCCCGA...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGGACGCCACTCAGGCTaGTCTTGGGCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIGRHSG*SWAPRA
Trigger: AGCCCGAGGAGCCCAAGATCAGCCTGAGTGGCGTCC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAAAGGAACACCCCTTCTaGGCTTTCAAATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLKEHPF*AFKFRS
Trigger: GCTTCTGAATTTGAAAGCTCAGAAGGGGTGTTCCTT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCTTTCTGACCTATCATaGGTATACACATCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALSDLS*VYTSAK
Trigger: CTTCGCAGATGTGTATACTCATGATAGGTCAGAAAG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSLSQPD*LGKTGS
Trigger: TGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAA...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTTCAGGTACGAGATGTaGTGCATGGCCTTATCCAAT +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEFRYEM*CMALSN
Trigger: ATTGGATAAGGCCATGCAGCACATCTCGTACCTGAA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGAGACTTTTTCACGTTaGTGCCATCAGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPETFSR*CHQVPS
Trigger: GGAAGGGACCTGATGGCACCAACGTGAAAAAGTCTC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCAGCCTTTCCCTATGTaGCTGGTTTCTAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPQPFPM*LVSSST
Trigger: AGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTC +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESFYLG*MERVIL
Trigger: GAGGATTACCCGCTCCATCCATCCAAGATAGAAACT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGATGGGGTTGGCCGTGTaGATTACATTCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQMGLAV*ITFTST
Trigger: GGTGGAGGTGAATGTAATCCACACGGCCAACCCCAT...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
3UTR CAA 72 bp GAGCAAAGTGCTATGTGGGTTTTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EQSAMWVLDHDC*FALLPYHQAKQ
Trigger: CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAACCCACATAGCACTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCACAGTCATAGGCAGTaGCGGTCAGCTTATATTGAT +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRHSHRQ*RSAYID
Trigger: ATCAATATAAGCTGACCGTCACTGCCTATGACTGTG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAEQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLSGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCTCCACAAATCTCACCTaGAAATCGCAGAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLSTNLT*KSQRRI
Trigger: GATGCGCCTCTGCGATTTGCAGGTGAGATTTGTGGA...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATTTATCCACTACCACTaGATCAAAGGGGACATTCTG +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLFIHYH*IKGDIL
Trigger: CAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp TTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTTTCAAATTCAGAAGCTaGTCGGGCAAAATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FGKFQHFDFGPCVSPGRSFKFRS*SGKMVD
Trigger: GTCCACCATTTTGCCCGAGCAGCTTCTGAATTTGAA...AGAACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCACAGTCATAGGCAGTaGCGGTCAGCTTATATTGAT +
Preference number: 4 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPHSHRQ*RSAYID
Trigger: ATCAATATAAGCTGACCGTCACTGCCTATGACTGTG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCACTGTGGCCTGTACTaGGGCGACTGGCTCGTCACA +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIHCGLY*GDWLVT
Trigger: TGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCTGCCTGGGTGCCGTTaGACTCAAACACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNILPGCR*TQTPGR
Trigger: GCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAAGGAACACCCCTTCTaGGCTTTCAAATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQKEHPF*AFKFRS
Trigger: GCTTCTGAATTTGAAAGCTCAGAAGGGGTGTTCCTT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGGCCAGGTTGTGGCCTaGCAGGTCAACAAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIGQVVA*QVNKGA
Trigger: CGCTCCTTTGTTGACCTGTCAGGCCACAACCTGGCC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GCACCCGTGGACATAGAGGGAGTAGTGGTGCCGATTCATATCTGTTTTATCAGAGTGGGTTTTAGACCATaGCTGTTTGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: APVDIEGVVVPIHICFIRVGFRP*LFVCSP
Trigger: AGGAGAGCAAACAAACAGTCATGGTCTAAAACCCAC...TCTGATAAAACAGATATGAATCGGCACCACTACTCCCTCTATGTCCACGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCTTTCTGACCTATCATaGGTATACACATCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRLSDLS*VYTSAK
Trigger: CTTCGCAGATGTGTATACTCATGATAGGTCAGAAAG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp GCACCCGTGGACATAGAGGGAGTAGTGGTGCCGATTCATATCTGTTTTATCAGACTTCCAGTGGAACTCTaGAGGTCTGTATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: APVDIEGVVVPIHICFIRLPVEL*RSVFLL
Trigger: GAGAAGAAATACAGACCTGCAGAGTTCCACTGGAAG...TCTGATAAAACAGATATGAATCGGCACCACTACTCCCTCTATGTCCACGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTCAATGCCCTTCTGCTaGAGGCGGGCCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNISMPFC*RRAMST
Trigger: GGTGGACATGGCCCGCCTGCAGCAGAAGGGCATTGA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTCATCCCACTCCAGCTaGTGCTGCCGGGTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNISSHSS*CCRVAF
Trigger: GAACGCAACCCGGCAGCAGCAGCTGGAGTGGGATGA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCTATGCCGTGGTAGGTaGGCTCCAGCCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNILCRGR*APARAC
Trigger: ACAAGCCCTGGCTGGAGCCCACCTACCACGGCATAG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAGTAAAGGGCACGTCTaGAGTGATGATTTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQSKGHV*SDDFVA
Trigger: AGCTACGAAATCATCACTCCAGACGTGCCCTTTACT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGCTGAGTTTCTATCTTaGATGGATGGAGCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQAEFLS*MDGAGN
Trigger: ATTACCCGCTCCATCCATCCAAGATAGAAACTCAGC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTGCGAATTCCGGGCGTaGGGAACTGCCGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNICEFRA*GTAGSS
Trigger: TGAACTCCCGGCAGTTCCCCACGCCCGGAATTCGCA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCGGGTGCACGAACTGTaGCTGGGCAGCCATGTGGTT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIRVHEL*LGSHVV
Trigger: AACCACATGGCTGCCCAGCCACAGTTCGTGCACCCG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCCATAGGCCTGGATGGTaGATGAATAGTCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLHRPGW*MNSLSA
Trigger: TGCAGAAAGACTATTCATTCACCATCCAGGCCTATG...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCA +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIVEGLL*VGVSVA
Trigger: TGCGACCGAGACACCTACTCAGAGAAGTCCCTCCAC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGCTCAAGGAACACCCCTTCTaGGCTTTCAAATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DYIHLHLKFVADVAAIQLKEHPF*AFKFRS
Trigger: GCTTCTGAATTTGAAAGCTCAGAAGGGGTGTTCCTT...GAGCTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR TCA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEEQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGAACAGTATTCAAAATaGTTGCCCACCTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLEQYSK*LPTCFR
Trigger: TCTAAAACAGGTGGGCAATCATTTTGAATACTGTTC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAGCGGATACACTTTCTaGCCTATCATGAGTATACAC +
Preference number: 4 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQSGYTF*PIMSIH
Trigger: GTGTATACTCATGATAGGTCAGAAAGTGTATCCGCT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCTGTTGTTCCATCCTTaGCACCCAGGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNILLFHP*HPGVQV
Trigger: CACCTGCACCCCTGGGTGGCAAGGATGGAACAACAG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCAACTGGCTGGGGTGTaGTTGGATCTGCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIQLAGV*LDLHAS
Trigger: AGAGGCGTGCAGATCCAAGCACACCCCAGCCAGTTG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTCACAACTGTCGCAGTaGTGGGGACGACTGCGAACG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNISQLSQ*WGRLRT
Trigger: CGTTCGCAGTCGTCCCCAGCACTGCGACAGTTGTGA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp GTGGATTACATTCACCTCCACCTTAAATTCGTTGCTGATGTAGCGGCCATTCAGAGTAAAGGGCACGTCTaGAGTGATGATTTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: VDYIHLHLKFVADVAAIQSKGHV*SDDFVA
Trigger: AGCTACGAAATCATCACTCCAGACGTGCCCTTTACT...CTGAATGGCCGCTACATCAGCAACGAATTTAAGGTGGAGGTGAATGTAATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTAAACCTCCTCGTAGCTaGCCATGGTGTCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIKPPRS*PWCPRL
Trigger: CAGGCGTGGACACCATGGCCAGCTACGAGGAGGTTT...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCTGGCATGGCTTTTCTaGAGTGCGAGGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNILAWLF*SARGQC
Trigger: ACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCGTCTCCAAAAGGAGTaGTCAGCCGGTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIRLQKE*SAGLQD
Trigger: GTCCTGCAGACCGGCTGACCACTCCTTTTGGAGACG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGCCCCCACCACGAGCTaGGTTTCTATCTTGGATGGA +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIAPTTS*VSILDG
Trigger: TCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTGTTGTCGTTCTCTGTaGCTATGCCGTGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNICCRSL*LCRGRW
Trigger: CCACCTACCACGGCATAGTCACAGAGAACGACAACA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTAAAATGCTGTCGTACTaGTTCCCCTCGATGACCGTG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIKMLSY*FPSMTV
Trigger: CACGGTCATCGAGGGGAAGCAGTACGACAGCATTTT...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTTGAACTCAAACACCTaGTCGCTGTCGTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNILNSNT*SLSWPL
Trigger: CAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTACGAGATGTGCTGCATaGCCTTATCCAATTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNITRCAA*PYPIPR
Trigger: TCGGGGAATTGGATAAGGCCATGCAGCACATCTCGT...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTCGGGAATTCTACATTaGGGACGTAGTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNISGILH*GRSGAI
Trigger: AATGGCACCACTACGTCCTCAATGTAGAATTCCCGA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR TCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGTCATTTTCAACTCCTaGAAACTCTTGCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIVIFNS*KLLPAS
Trigger: GCTTGCTGGCAAGAGTTTTCAGGAGTTGAAAATGAC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTAGTAAAGGGCACGTCTaGAGTGATGATTTCGTAGCT +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNISKGHV*SDDFVA
Trigger: AGCTACGAAATCATCACTCCAGACGTGCCCTTTACT...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR GCA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTTTATCCACTACCACTaGATCAAAGGGGACATTCTG +
Preference number: 4 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIFIHYH*IKGDIL
Trigger: CAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS CCA 90 bp GTCGGTGGGCAGGCCCATGGTCCAGTTGAGGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCCCGCGGCCGCACCTGGAGTAAGGCC +
Preference number: 5 (lower is better)
Translates to: VGGQAHGPVEGSTRG*QQLGSARGRTWSKA
Trigger: GGCCTTACTCCAGGTGCGGCCGCGGGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGCTGCTGCTGCCGGGTaGCGTTCTGGGGGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFAAAAG*RSGGRP
Trigger: AGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGC...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 90 bp GGTCGCTGTCGTGGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATGGCAGCAGCTCGGCAGTGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: GRCRGHCRWAGPWSS*GIHSGMAAARQCPR
Trigger: CCGCGGGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS GCA 90 bp TCTGAAGGAGCCGCGCCGTACCGGCTTCTCGGAGGCCCTGGCCTGTaGTGCCTCTCAGTCCTGGAGGTCGCCCGCCCACTCCTACCTCCA +
Preference number: 5 (lower is better)
Translates to: SEGAAPYRLLGGPGL*CLSVLEVARPLLPP
Trigger: TGGAGGTAGGAGTGGGCGGGCGACCTCCAGGACTGAGAGGCAGCACAGGCCAGGGCCTCCGAGAAGCCGGTACGGCGCGGCTCCTTCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477264.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGCGAACGGGTGGGGGTaGGCCAGGTTGTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPANGWG*ARLWPD
Trigger: GTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCTCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGSLSWP*SVGRPM
Trigger: CATGGGCCTGCCCACCGACAATGGCCACGACAGCGA...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCCTGGCTGGGGTGTGCTaGGATCTGCACGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGLAGVC*DLHASA
Trigger: GGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCAG...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCCTGGCTGGGGTGTGCTaGGATCTGCACGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPLAGVC*DLHASA
Trigger: GGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCAG...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 90 bp GGCAGTGCCCGCGGCCGCACCACAGAGCCGGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCAGCCTTTCCCTATGTGGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GSARGRTTEPVEGLL*VGVSVAAFPYVAGF
Trigger: GAAACCAGCCACATAGGGAAAGGCTGCGACCGAGACACCTACTCAGAGAAGTCCCTCCACCGGCTCTGTGGTGCGGCCGCGGGCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS GCA 90 bp CGGCTCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCACTaGCTGGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RLFGADRHDAIRDPH*LGAVELKHLVAVVA
Trigger: GGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCCCTGTTGTTCCATCCTaGCCACCCAGGGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSPVVPS*PPRGAG
Trigger: ACCTGCACCCCTGGGTGGCAAGGATGGAACAACAGG...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGRPMVQ*RDPLGD
Trigger: ATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCT...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCGGATGGCGGCCAGAGAGGACGTGTCAGCTCCTCGTGGGACTGAAGAGCAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: RAGWRPERTCQLLVGLKSRPMVQ*RDPLGD
Trigger: ATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCT...GCTCTTCAGTCCCACGAGGAGCTGACACGTCCTCTCTGGCCGCCATCCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPRPMVQ*RDPLGD
Trigger: ATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAGGCTCCAGCCAGGGCTaGTGCTTGTTAACTCGCGCG +
Preference number: 5 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLGSSQG*CLLTRA
Trigger: CGCGCGAGTTAACAAGCACAAGCCCTGGCTGGAGCC...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCGAGGAGCACGGTGTaGTCGTTCTCTGTGACTATG +
Preference number: 5 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTSRSTV*SFSVTM
Trigger: CATAGTCACAGAGAACGACAACACCGTGCTCCTCGA...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTCTCCAGGTGGATATTaGGAAAGACGGCCAACGCGC +
Preference number: 5 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFSPGGY*ERRPTR
Trigger: GCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAATGGTGAACGGCTCTTaGGGGCTGACCGACACGACG +
Preference number: 5 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEMVNGS*GLTDTT
Trigger: CGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCAT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGGTCCAGCCCCTCCTaGCAGGTATACAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPRSSPS*QVYRQS
Trigger: CGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTACCATGACTGTTTGTTaGCTCTCCTGCCCTACCACC +
Preference number: 5 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTTMTVC*LSCPTT
Trigger: GGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCTGGCTGGGGTGTGCTaGGATCTGCACGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGLAGVC*DLHASA
Trigger: GGCAGAGGCGTGCAGATCCAAGCACACCCCAGCCAG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTATGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLWGLAR*WPDRST
Trigger: TGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCA...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTGCGAACGGGTGGGGGTaGGCCAGGTTGTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSANGWG*ARLWPD
Trigger: GTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGC...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 5 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGGTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 5 (lower is better)
Translates to: GSGEGGPGGKSPCSELRTENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...AGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS GCA 90 bp CGTCCTCGCTTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGGTCTGAAGGAGCCGCGCCGTACCGG +
Preference number: 5 (lower is better)
Translates to: RPRFPLPLPLPPPPH*CAGPHRSEGAAPYR
Trigger: CCGGTACGGCGCGGCTCCTTCAGACCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAAGCGAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477264.1
CDS CCA 90 bp CTCACTGCCTGGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCGTaGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTTGAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: LTAWVPLNSNTWSLS*PLSVGRPMVQLRDP
Trigger: TGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CCA 90 bp TCTTTGGGGCTGACCGACACGACGCCATCCGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: SLGLTDTTPSGILTA*VPLNSNTWSLSWPL
Trigger: CAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGVKPAR*PRKNWV
Trigger: GACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAAC...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCATTGTGCTGGTGATTTaGAGTCTGCGAATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFIVLVI*SLRIPG
Trigger: GCCCGGAATTCGCAGACTCAAAATCACCAGCACAAT...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCTGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGWGLAR*WPDRST
Trigger: TGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCA...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGCTGCTGCTGCCGGGTaGCGTTCTGGGGGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAAAAAG*RSGGRP
Trigger: AGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCAGCATGTTTTACCCTTaGTCAACGAGCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPSMFYP*STSPAG
Trigger: GCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCT...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CCA 90 bp ACTGTGGCCTGTACTGAGGCGACTGGCTCGTCACATGTCTCCAGGTaGATATTTGGAAAGACGGCCAACGCGCCGGTGCCCGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: TVACTEATGSSHVSR*IFGKTANAPVPGSY
Trigger: GTATGAGCCGGGCACCGGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGACATGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS-3UTR CAA 90 bp CCCTTCTGCTGCAGGCGGGCCATGTCCACCTCCAGGCTCTCCTGCTCGTGGTTCCAGTCCAGTTTCTCTTaGGAGCGAATGACTCCCTCA +
Preference number: 5 (lower is better)
Translates to: PFCCRRAMSTSRLSCSWFQSSFS*ERMTPS
Trigger: TGAGGGAGTCATTCGCTCCAAAGAGAAACTGGACTG...GAACCACGAGCAGGAGAGCCTGGAGGTGGACATGGCCCGCCTGCAGCAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp CGATCTCCTCGGACACCAGTGATTCTTGAACTGTGGGGTCCTCAGCCCCGTCCCCCACTCAGGCTGATCTaGGGCTCCTCGGGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: RSPRTPVILELWGPQPRPPLRLI*GSSGCK
Trigger: TTTACAGCCCGAGGAGCCCAAGATCAGCCTGAGTGG...GGGACGGGGCTGAGGACCCCACAGTTCAAGAATCACTGGTGTCCGAGGAGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGCGAACGGGTGGGGGTaGGCCAGGTTGTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: RARAQSSELHFTFQSRVTANGWG*ARLWPD
Trigger: GTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGCTGCTGCTGCCGGGTaGCGTTCTGGGGGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLAAAAG*RSGGRP
Trigger: AGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGCTGCTGCTGCCGGGTaGCGTTCTGGGGGTCGCCCT +
Preference number: 5 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEAAAAG*RSGGRP
Trigger: AGGGCGACCCCCAGAACGCAACCCGGCAGCAGCAGC...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGGGCCAGTGTCCTCTCCCCGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 5 (lower is better)
Translates to: RAQLAWLFWSARGQCPLPENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...GGGGAGAGGACACTGGCCCCTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCTGGGGAGGGAGGACCCGGCGGGAAGAGCCCGTGCTCAGAGCTCCGAACTTCTTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: VWGGRTRREEPVLRAPNFLDHDC*FALLPY
Trigger: GTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAA...GAAGTTCGGAGCTCTGAGCACGGGCTCTTCCCGCCGGGTCCTCCCTCCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CCA 90 bp CTCGGTCGCAGCCTTTCCCTATGTGGCTGGTTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTGGCTCGTCACATGTCTCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LGRSLSLCGWFLAPL*PVLRRLARHMSPGG
Trigger: TCCACCTGGAGACATGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTGCGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRASLSWP*SVGRPM
Trigger: CATGGGCCTGCCCACCGACAATGGCCACGACAGCGA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCAGGTCCAGCCCCTCCTaGCAGGTATACAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGRSSPS*QVYRQS
Trigger: CGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCT...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATGCGTGTTCCATGGGGTaGGCCGTGTGGATTACATTC +
Preference number: 5 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHACSMG*AVWITF
Trigger: GAATGTAATCCACACGGCCAACCCCATGGAACACGC...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp AGGGTGGGCGGGGAGCCTAGGGTCCTACACACCAAGCACAGCGACGATCGTGGCTTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: RVGGEPRVLHTKHSDDRGLDHDC*FALLPY
Trigger: GTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAA...GCCACGATCGTCGCTGTGCTTGGTGTGTAGGACCCTAGGCTCCCCGCCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGTGCAGGTCGCCACCTaGCCAGCAAGCCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLVQVAT*PASPHH
Trigger: GTGGTGGGGGCTTGCTGGCAAGGTGGCGACCTGCAC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAAGCCAGGGCTTGTGCTaGTTAACTCGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RARAQSSELHFTFQSRVTSQGLC*LTRAAQ
Trigger: CTGGGCCGCGCGAGTTAACAAGCACAAGCCCTGGCT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTCTCCAGGTGGATATTaGGAAAGACGGCCAACGCGC +
Preference number: 5 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGSPGGY*ERRPTR
Trigger: GCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGA...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCATGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: GRNDFVHRGPLGLGERMAWGLAR*WPDRST
Trigger: TGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCA...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGCATGGTCCGCCGATGTGCGGCCCGGATCCGAAATACCCCCAGGATAATCATCTGGCCGAAATGACTTaGTACATCGTGGACCCTTGG +
Preference number: 5 (lower is better)
Translates to: PHGPPMCGPDPKYPQDNHLAEMT*YIVDPW
Trigger: CCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAG...ATGATTATCCTGGGGGTATTTCGGATCCGGGCCGCACATCGGCGGACCATGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GCCAGATTGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCAGCATGTTTTACCCTTaGTCAACGAGCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: ARLPRKNWVMCRSPPAEASMFYP*STSPAG
Trigger: GCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCT...GGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GGCGTGGGGAACTGCCGGGAGTTCAGGTACGAGATGTGCTGCATGGCCTTATCCACCATGACTGTTTGTTaGCTCTCCTGCCCTACCACC +
Preference number: 5 (lower is better)
Translates to: GVGNCREFRYEMCCMALSTMTVC*LSCPTT
Trigger: GGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT...GGATAAGGCCATGCAGCACATCTCGTACCTGAACTCCCGGCAGTTCCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAATTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAELDHDC*FALLPY
Trigger: GTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAA...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS GCA 90 bp TCTTATCCGCGAGTTTCCCGGAACGGAGAGTTAAGCCAGCCAGATTaGCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SYPRVSRNGELSQPD*LGKTGSCAGRHLAS
Trigger: GCTGGCAAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCGTTCCGGGAAACTCGCGGATAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS CCA 90 bp ACCTTGCCAGCAAGCCCCCACCACGAGCTGAGTTTCTATCTTGGATaGATGGAGCGGGTAATCCTCAGTCACAGAGAAGGGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TLPASPHHELSFYLG*MERVILSHREGLVG
Trigger: TCCCACGAGCCCTTCTCTGTGACTGAGGATTACCCGCTCCATCCATCCAAGATAGAAACTCAGCTCGTGGTGGGGGCTTGCTGGCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAAGCCAGGGCTTGTGCTaGTTAACTCGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRSQGLC*LTRAAQ
Trigger: CTGGGCCGCGCGAGTTAACAAGCACAAGCCCTGGCT...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGGCTCCAGCCAGGGCTaGTGCTTGTTAACTCGCGCG +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRGSSQG*CLLTRA
Trigger: CGCGCGAGTTAACAAGCACAAGCCCTGGCTGGAGCC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCCTGTTGTTCCATCCTaGCCACCCAGGGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAPVVPS*PPRGAG
Trigger: ACCTGCACCCCTGGGTGGCAAGGATGGAACAACAGG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRSLSWP*SVGRPM
Trigger: CATGGGCCTGCCCACCGACAATGGCCACGACAGCGA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGCCGAAATGACTTTGTACATCGTGGACCCTTGGGACTGGGAGAACGGATGGCAACTGCCTGGGTGCCGTaGAACTCAAACACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GRNDFVHRGPLGLGERMATAWVP*NSNTWS
Trigger: CGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGT...TGCCATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTACAAAGTCATTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTATGGTGAACGGCTCTTaGGGGCTGACCGACACGACG +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAMVNGS*GLTDTT
Trigger: CGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCAT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGCGAACGGGTGGGGGTaGGCCAGGTTGTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQANGWG*ARLWPD
Trigger: GTCAGGCCACAACCTGGCCAACCCCCACCCGTTCGC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTGTTCCGGGTGCACGAACTGTGGCTGGGCAGCCATGTGGTTGGCGTGTTCCATGAAAATTCCAGCACTTaGACTTCGGGCCATGCGTCT +
Preference number: 5 (lower is better)
Translates to: VFRVHELWLGSHVVGVFHENSST*TSGHAS
Trigger: AGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTC...ATGGAACACGCCAACCACATGGCTGCCCAGCCACAGTTCGTGCACCCGGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp TTCCCCGAGGTCTTCTCCCTCCAAGGTCAATACCAACTGGCTGGGGTGTGCTTGTCGAGGAGCACGGTGTaGTCGTTCTCTGTGACTATG +
Preference number: 5 (lower is better)
Translates to: FPEVFSLQGQYQLAGVCLSRSTV*SFSVTM
Trigger: CATAGTCACAGAGAACGACAACACCGTGCTCCTCGA...CAAGCACACCCCAGCCAGTTGGTATTGACCTTGGAGGGAGAAGACCTCGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCCAGTCCAGTTTCTCTTaGGAGCGAATGACTCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGQSSFS*ERMTPS
Trigger: TGAGGGAGTCATTCGCTCCAAAGAGAAACTGGACTG...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAGACGGTCAGCTTATATaGATGTTCTTTCCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEDGQLI*MFFPVV
Trigger: AACTACGGGAAAGAACATCAATATAAGCTGACCGTC...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCCTGTTGTTCCATCCTaGCCACCCAGGGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: MFYPLSTSPAGMAFLECEPVVPS*PPRGAG
Trigger: ACCTGCACCCCTGGGTGGCAAGGATGGAACAACAGG...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGACCTGTTGTTCCATCCTaGCCACCCAGGGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRPVVPS*PPRGAG
Trigger: ACCTGCACCCCTGGGTGGCAAGGATGGAACAACAGG...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GCACCCGTGGACATAGAGGGAGTAGTGGTGCCGATTCATATCTGTTTTATCAGATCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: APVDIEGVVVPIHICFIRSLSWP*SVGRPM
Trigger: CATGGGCCTGCCCACCGACAATGGCCACGACAGCGA...TCTGATAAAACAGATATGAATCGGCACCACTACTCCCTCTATGTCCACGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAATGGTGAACGGCTCTTaGGGGCTGACCGACACGACG +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRMVNGS*GLTDTT
Trigger: CGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCAT...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAAGGTCCAGCCCCTCCTaGCAGGTATACAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: RARAQSSELHFTFQSRVTRSSPS*QVYRQS
Trigger: CGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTACTGGCCGAAAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: TKHSDDRGGEGSAHLLAEREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...TTCGGCCAGTAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 90 bp AACATGGTGAAATCCCATCTCACAGAGCCGGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCAGCCTTTCCCTATGTGGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: NMVKSHLTEPVEGLL*VGVSVAAFPYVAGF
Trigger: GAAACCAGCCACATAGGGAAAGGCTGCGACCGAGACACCTACTCAGAGAAGTCCCTCCACCGGCTCTGTGAGATGGGATTTCACCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGAGCCAGGGCTTGTGCTaGTTAACTCGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPSQGLC*LTRAAQ
Trigger: CTGGGCCGCGCGAGTTAACAAGCACAAGCCCTGGCT...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTTCTCCAGGTGGATATTaGGAAAGACGGCCAACGCGC +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRASPGGY*ERRPTR
Trigger: GCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGA...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGACTGCCTGGGTGCCGTaGAACTCAAACACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: MFYPLSTSPAGMAFLECETAWVP*NSNTWS
Trigger: CGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AAGGATCCTGACGGAAGAGGAAGATCAGCCGGCACCCGTGGACATAGAGGGAGTATTGTGCTGGTGATTTaGAGTCTGCGAATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: KDPDGRGRSAGTRGHRGSIVLVI*SLRIPG
Trigger: GCCCGGAATTCGCAGACTCAAAATCACCAGCACAAT...ACTCCCTCTATGTCCACGGGTGCCGGCTGATCTTCCTCTTCCGTCAGGATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCGACGGTCAGCTTATATaGATGTTCTTTCCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGDGQLI*MFFPVV
Trigger: AACTACGGGAAAGAACATCAATATAAGCTGACCGTC...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGAT +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQRPMVQ*RDPLGD
Trigger: ATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GCACCCGTGGACATAGAGGGAGTAGTGGTGCCGATTCATATCTGTTTTATCAGAATGGTGAACGGCTCTTaGGGGCTGACCGACACGACG +
Preference number: 5 (lower is better)
Translates to: APVDIEGVVVPIHICFIRMVNGS*GLTDTT
Trigger: CGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCAT...TCTGATAAAACAGATATGAATCGGCACCACTACTCCCTCTATGTCCACGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp GTCCTACACACCAAGCACAGCGACGATCGTGGCGGGGAGGGGTCTGCACACCTAACAGGCTCAGTTTCATaGTCATTTTCAACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: VLHTKHSDDRGGEGSAHLTGSVS*SFSTPE
Trigger: TTCAGGAGTTGAAAATGACAATGAAACTGAGCCTGT...TAGGTGTGCAGACCCCTCCCCGCCACGATCGTCGCTGTGCTTGGTGTGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRAVKPAR*PRKNWV
Trigger: GACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAAC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTGCAGAGGCCACAGTCACGCCTCGTTAAAACACTaGATTGTGCTGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: ASEKLGHVQVATCRGHSHASLKH*IVLVIL
Trigger: CAAAATCACCAGCACAATCAAGTGTTTTAACGAGGC...GTGACTGTGGCCTCTGCAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGCGTGTTCCATGGGGTaGGCCGTGTGGATTACATTC +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRACSMG*AVWITF
Trigger: GAATGTAATCCACACGGCCAACCCCATGGAACACGC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTGTACATCGTGGACCCTaGGGACTGGGAGAACGGATG +
Preference number: 5 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRVHRGP*GLGERM
Trigger: CATCCGTTCTCCCAGTCCCAAGGGTCCACGATGTAC...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTCTGGCCGAAATGACTTaGTACATCGTGGACCCTTGG +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRALAEMT*YIVDPW
Trigger: CCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAG...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GGTCATGCCCAGTTCAGAGCTGCTCACTTCAATGCCCTTCTGCTGCAGGCGGGCAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: GHAQFRAAHFNALLLQAGREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...GCCCGCCTGCAGCAGAAGGGCATTGAAGTGAGCAGCTCTGAACTGGGCATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTACCATGACTGTTTGTTaGCTCTCCTGCCCTACCACC +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRATMTVC*LSCPTT
Trigger: GGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTCGAGGAGCACGGTGTaGTCGTTCTCTGTGACTATG +
Preference number: 5 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESRSTV*SFSVTM
Trigger: CATAGTCACAGAGAACGACAACACCGTGCTCCTCGA...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTGGGAGTGAGCATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCGACGGTCAGCTTATATaGATGTTCTTTCCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: PGGSEHVLPFVNEPSWHGDGQLI*MFFPVV
Trigger: AACTACGGGAAAGAACATCAATATAAGCTGACCGTC...GCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCTCACTCCCACCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTTCTCCAGGTGGATATTaGGAAAGACGGCCAACGCGC +
Preference number: 5 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRSPGGY*ERRPTR
Trigger: GCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGA...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGACTGCCTGGGTGCCGTaGAACTCAAACACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPTAWVP*NSNTWS
Trigger: CGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGT...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCTCATCCACACCGAGATGGTGAACGGCTCTTTGGGGCTGACCGACACGACGCCACAGGCTCAGTTTCATaGTCATTTTCAACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SHPHRDGERLFGADRHDATGSVS*SFSTPE
Trigger: TTCAGGAGTTGAAAATGACAATGAAACTGAGCCTGT...GGCGTCGTGTCGGTCAGCCCCAAAGAGCCGTTCACCATCTCGGTGTGGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRVKPAR*PRKNWV
Trigger: GACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAAC...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAGGTCCAGCCCCTCCTaGCAGGTATACAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQRSSPS*QVYRQS
Trigger: CGACTGTCTGTATACCTGCAAGGAGGGGCTGGACCT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCCACTCAGGCTGATCTaGGGCTCCTCGGGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPPLRLI*GSSGCK
Trigger: TTTACAGCCCGAGGAGCCCAAGATCAGCCTGAGTGG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTACTGGCCGAAATGACTTaGTACATCGTGGACCCTTGG +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLLAEMT*YIVDPW
Trigger: CCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAG...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp ATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAGAGCATGTTTTACCCTTaGTCAACGAGCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: MFYPLSTSPAGMAFLECESMFYP*STSPAG
Trigger: GCCAGCTGGGCTCGTTGACAAAGGGTAAAACATGCT...CTCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAATTGTGCTGGTGATTTaGAGTCTGCGAATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLIVLVI*SLRIPG
Trigger: GCCCGGAATTCGCAGACTCAAAATCACCAGCACAAT...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CATGTTTTACCCTTTGTCAACGAGCCCAGCTGGCATGGCTTTTCTGGAGTGCGAATTGTGCTGGTGATTTaGAGTCTGCGAATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: HVLPFVNEPSWHGFSGVRIVLVI*SLRIPG
Trigger: GCCCGGAATTCGCAGACTCAAAATCACCAGCACAAT...TCGCACTCCAGAAAAGCCATGCCAGCTGGGCTCGTTGACAAAGGGTAAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGCGTGTTCCATGGGGTaGGCCGTGTGGATTACATTC +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPACSMG*AVWITF
Trigger: GAATGTAATCCACACGGCCAACCCCATGGAACACGC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGGCGTGTTCCATGGGGTaGGCCGTGTGGATTACATTC +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQACSMG*AVWITF
Trigger: GAATGTAATCCACACGGCCAACCCCATGGAACACGC...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TGTTTTGGAAAATTCCAGCACTTTGACTTCGGGCCATGCGTCTCTCCTGGACGTCTGGCCGAAATGACTTaGTACATCGTGGACCCTTGG +
Preference number: 5 (lower is better)
Translates to: CFGKFQHFDFGPCVSPGRLAEMT*YIVDPW
Trigger: CCAAGGGTCCACGATGTACAAAGTCATTTCGGCCAG...ACGTCCAGGAGAGACGCATGGCCCGAAGTCAAAGTGCTGGAATTTTCCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTC +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPVKPAR*PRKNWV
Trigger: GACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAAC...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTATTAGACCATGACTGTTaGTTTGCTCTCCTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLLDHDC*FALLPY
Trigger: GTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAA...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGTCCAGTTTCTCTTaGGAGCGAATGACTCCCTCA +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQQSSFS*ERMTPS
Trigger: TGAGGGAGTCATTCGCTCCAAAGAGAAACTGGACTG...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp ACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGCAGGGCTGACGGTCAGCTTATATaGATGTTCTTTCCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: TMTVCLLSCPTTKQSSRADGQLI*MFFPVV
Trigger: AACTACGGGAAAGAACATCAATATAAGCTGACCGTC...AGCCCTGCTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAGCCTCGTTAAAACACTaGATTGTGCTGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RARAQSSELHFTFQSRVTASLKH*IVLVIL
Trigger: CAAAATCACCAGCACAATCAAGTGTTTTAACGAGGC...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp AGAGCCCGTGCTCAGAGCTCCGAACTTCACTTTACATTCCAGTCCCGGGTTACAACAGGCTCAGTTTCATaGTCATTTTCAACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: RARAQSSELHFTFQSRVTTGSVS*SFSTPE
Trigger: TTCAGGAGTTGAAAATGACAATGAAACTGAGCCTGT...TGTAACCCGGGACTGGAATGTAAAGTGAAGTTCGGAGCTCTGAGCACGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CTCCAAAAGGAGTGGTCAGCCGGTCTGCAGGACACCTCTCAGTTTCTCCTTTTAGCCTCGTTAAAACACTaGATTGTGCTGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: LQKEWSAGLQDTSQFLLLASLKH*IVLVIL
Trigger: CAAAATCACCAGCACAATCAAGTGTTTTAACGAGGC...TAAAAGGAGAAACTGAGAGGTGTCCTGCAGACCGGCTGACCACTCCTTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 90 bp GTGGATTTATCCACTACCACTGCATCAAAGGGGACATTCTGCCCGTaGATTTTAAATCCACAAATCTCACCTGCAAATCGCAGAGGCGCA +
Preference number: 5 (lower is better)
Translates to: VDLSTTTASKGTFCP*ILNPQISPANRRGA
Trigger: TGCGCCTCTGCGATTTGCAGGTGAGATTTGTGGATTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361311.4
ENST00000650348.1
CDS TCA 90 bp AATAGTCTTTCTGCAGCTCACAGTCCAGTTTCTCTTTGGAGCGAATaGCTCCCTCACCAGTGGATTTATCCACTACCACTGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: NSLSAAHSPVSLWSE*LPHQWIYPLPLHQR
Trigger: CCTTTGATGCAGTGGTAGTGGATAAATCCACTGGTGAGGGAGTCATTCGCTCCAAAGAGAAACTGGACTGTGAGCTGCAGAAAGACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTTGGGGGTTGGCCAGGTaGTGGCCTGACAGGTCAACA +
Preference number: 5 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIWGLAR*WPDRST
Trigger: TGTTGACCTGTCAGGCCACAACCTGGCCAACCCCCA...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTCCACTCAGGCTGATCTaGGGCTCCTCGGGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIPLRLI*GSSGCK
Trigger: TTTACAGCCCGAGGAGCCCAAGATCAGCCTGAGTGG...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp GTTTTAGACCATGACTGTTTGTTTGCTCTCCTGCCCTACCACCAAGCAAAGCAGAGAGAACAGGCTGTTTaGGAAAATTCCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: VLDHDCLFALLPYHQAKQREQAV*ENSSTL
Trigger: CAAAGTGCTGGAATTTTCCAAAACAGCCTGTTCTCT...CTGCTTTGCTTGGTGGTAGGGCAGGAGAGCAAACAAACAGTCATGGTCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS-3UTR CAA 90 bp TCACTTTACATTCCAGTCCCGGGTTACACTAGCACAAAGGACACAAGGAATCCGCAAATCTCACCTTCTTaGGTGACTGTCACCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SLYIPVPGYTSTKDTRNPQISPS*VTVTSK
Trigger: TTTTGAGGTGACAGTCACCAAAGAAGGTGAGATTTG...CGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGGGACTGGAATGTAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377298.9
CDS GCA 90 bp TTTGGAGCGAATGACTCCCTCACCAGTGGATTTATCCACTACCACTaGATCAAAGGGGACATTCTGCCCGTGAATTTTAAATCCACAAAT +
Preference number: 5 (lower is better)
Translates to: FGANDSLTSGFIHYH*IKGDILPVNFKSTN
Trigger: ATTTGTGGATTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAATCCACTGGTGAGGGAGTCATTCGCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS-3UTR CAA 90 bp CCGGGTTACACTAGCACAAAGGACACAAGGAATCCGATTTATTTACAAAATATTGCCTCGTTAAAACACTaGATTGTGCTGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PGYTSTKDTRNPIYLQNIASLKH*IVLVIL
Trigger: CAAAATCACCAGCACAATCAAGTGTTTTAACGAGGC...AATATTTTGTAAATAAATCGGATTCCTTGTGTCCTTTGTGCTAGTGTAACCCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CAA 90 bp CCGCGCGCTCAGGACGCGGCGCCCTCCCCGCCTCAGAGCAGCGTCTaGCTGAAGGCAGCGGCAGCAACTAAGATGGCGGCGGCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: PRAQDAAPSPPQSSV*LKAAAATKMAAALS
Trigger: AGAGAGCGCCGCCGCCATCTTAGTTGCTGCCGCTGCCTTCAGCAAGACGCTGCTCTGAGGCGGGGAGGGCGCCGCGTCCTGAGCGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361311.4
CDS TCA 72 bp ACGCGGCGCCCTCCCCGCCTCAGAGCAGCGTCTTGCTaGAGGCAGCGGCAGCAACTAAGATGGCGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: TRRPPRLRAASC*RQRQQLRWRRR
Trigger: GCGCCGCCGCCATCTTAGTTGCTGCCGCTGCCTTCAGCAAGACGCTGCTCTGAGGCGGGGAGGGCGCCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361311.4
CDS CCA 72 bp CAGGCCCATGGTCCAGTTGAGGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCCCGCGGCCGCACCTGG +
Preference number: 6 (lower is better)
Translates to: QAHGPVEGSTRG*QQLGSARGRTW
Trigger: CCAGGTGCGGCCGCGGGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS CCA 72 bp CAGGCCCATGGTCCAGTTGAGGGATCCACTCGGGGATaGCAGCAGCTCGGCAGTGCCCGCGGCCGCACCACA +
Preference number: 6 (lower is better)
Translates to: QAHGPVEGSTRG*QQLGSARGRTT
Trigger: TGTGGTGCGGCCGCGGGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS CAA 72 bp CAGGACGCGGCGCCCTCCCCGCCTCAGAGCAGCGTCTaGCTGAAGGCAGCGGCAGCAACTAAGATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: QDAAPSPPQSSV*LKAAAATKMAA
Trigger: CGCCGCCATCTTAGTTGCTGCCGCTGCCTTCAGCAAGACGCTGCTCTGAGGCGGGGAGGGCGCCGCGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361311.4
CDS CAA 90 bp TGGTCGCTGTCGTGGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGATGGCAGCAGCTCGGCAGTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: WSLSWPLSVGRPMVQ*RDPLGDGSSSAVPA
Trigger: CGCGGGCACTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 72 bp CGTGGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTTaGGGGATCCACTCGGGGATGGCAGCAGCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: RGHCRWAGPWSS*GIHSGMAAARQ
Trigger: CTGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CAA 72 bp TCGTGGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTaGAGGGATCCACTCGGGGATGGCAGCAGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: SWPLSVGRPMVQ*RDPLGDGSSSA
Trigger: TGCCGAGCTGCTGCCATCCCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 72 bp CGCGGCCGCACCACAGAGCCGGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCAGCCTTTCCCTATGTG +
Preference number: 6 (lower is better)
Translates to: RGRTTEPVEGLL*VGVSVAAFPYV
Trigger: CACATAGGGAAAGGCTGCGACCGAGACACCTACTCAGAGAAGTCCCTCCACCGGCTCTGTGGTGCGGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
CDS GCA 72 bp GGGGCTGACCGACACGACGCCATCCGGGATCCTCACTaGCTGGGTGCCGTTGAACTCAAACACCTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: GADRHDAIRDPH*LGAVELKHLVA
Trigger: AGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CAA 90 bp GCCTGGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATGGTCCAGTTGAGGGATCCACTCGGG +
Preference number: 6 (lower is better)
Translates to: AWVPLNSNTWSLSWP*SVGRPMVQLRDPLG
Trigger: CCCGAGTGGATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CAA 90 bp CTGACCGACACGACGCCATCCGGGATCCTCACTGCCTGGGTGCCGTaGAACTCAAACACCTGGTCGCTGTCGTGGCCATTGTCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: LTDTTPSGILTAWVP*NSNTWSLSWPLSVG
Trigger: GCCCACCGACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CCA 72 bp CTGACCGACACGACGCCATCCGGGATCCTCACTGCCTaGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LTDTTPSGILTA*VPLNSNTWSLS
Trigger: CGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCGTGTCGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS TCA 72 bp CGACGCCATCCGGGATCCTCACTGCCTGGGTGCCGTTaGACTCAAACACCTGGTCGCTGTCGTGGCCATTGT +
Preference number: 6 (lower is better)
Translates to: RRHPGSSLPGCR*TQTPGRCRGHC
Trigger: ACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCAGGCAGTGAGGATCCCGGATGGCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CCA 72 bp GGCGACTGGCTCGTCACATGTCTCCAGGTGGATATTTaGAAAGACGGCCAACGCGCCGGTGCCCGGCTCATA +
Preference number: 6 (lower is better)
Translates to: GDWLVTCLQVDI*KDGQRAGARLI
Trigger: TATGAGCCGGGCACCGGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGACATGTGACGAGCCAGTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS CCA 72 bp TGGGTGCCGTTGAACTCAAACACCTGGTCGCTGTCGTaGCCATTGTCGGTGGGCAGGCCCATGGTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: WVPLNSNTWSLS*PLSVGRPMVQL
Trigger: CAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS CAA 72 bp AGGCGACTGGCTCGTCACATGTCTCCAGGTGGATATTaGGAAAGACGGCCAACGCGCCGGTGCCCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: RRLARHMSPGGY*ERRPTRRCPAH
Trigger: ATGAGCCGGGCACCGGCGCGTTGGCCGTCTTTCCAAATATCCACCTGGAGACATGTGACGAGCCAGTCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS CAA 72 bp CCGTTGAACTCAAACACCTGGTCGCTGTCGTGGCCATaGTCGGTGGGCAGGCCCATGGTCCAGTTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: PLNSNTWSLSWP*SVGRPMVQLRD
Trigger: ATCCCTCAACTGGACCATGGGCCTGCCCACCGACAATGGCCACGACAGCGACCAGGTGTTTGAGTTCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1
CDS GCA 72 bp TTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCACTaGTGTGCTGGTCCTCATAGGTCTGAAGGAGCCGCG +
Preference number: 6 (lower is better)
Translates to: FPLPLPLPPPPH*CAGPHRSEGAA
Trigger: CGCGGCTCCTTCAGACCTATGAGGACCAGCACAGCAGTGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477264.1
CDS CCA 72 bp AGTAGGTGTCTCGGTCGCAGCCTTTCCCTATGTGGCTaGTTTCTAGCTCCACTGTGGCCTGTACTGAGGCGA +
Preference number: 6 (lower is better)
Translates to: SRCLGRSLSLCG*FLAPLWPVLRR
Trigger: TCGCCTCAGTACAGGCCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCTGCGACCGAGACACCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS CAA 90 bp TTCTTATCCGCGAGTTTCCCGGAACGGAGAGTTAAGCCAGCCAGATaGCCTCGGAAAAACTGGGTCATGTGCAGGTCGCCACCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: FLSASFPERRVKPAR*PRKNWVMCRSPPCQ
Trigger: CTGGCAAGGTGGCGACCTGCACATGACCCAGTTTTTCCGAGGCAATCTGGCTGGCTTAACTCTCCGTTCCGGGAAACTCGCGGATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435891.5
CDS TCA 72 bp AAATCCCATCTCACAGAGCCGGTGGAGGGACTTCTCTaGGTAGGTGTCTCGGTCGCAGCCTTTCCCTATGTG +
Preference number: 6 (lower is better)
Translates to: KSHLTEPVEGLL*VGVSVAAFPYV
Trigger: CACATAGGGAAAGGCTGCGACCGAGACACCTACTCAGAGAAGTCCCTCCACCGGCTCTGTGAGATGGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650348.1
CDS CCA 72 bp AGCCTTTCCCTATGTGGCTGGTTTCTAGCTCCACTGTaGCCTGTACTGAGGCGACTGGCTCGTCACATGTCT +
Preference number: 6 (lower is better)
Translates to: SLSLCGWFLAPL*PVLRRLARHMS
Trigger: AGACATGTGACGAGCCAGTCGCCTCAGTACAGGCCACAGTGGAGCTAGAAACCAGCCACATAGGGAAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000464286.1
ENST00000650348.1
CDS TCA 72 bp TCTGCAGCTCACAGTCCAGTTTCTCTTTGGAGCGAATaGCTCCCTCACCAGTGGATTTATCCACTACCACTG +
Preference number: 6 (lower is better)
Translates to: SAAHSPVSLWSE*LPHQWIYPLPL
Trigger: CAGTGGTAGTGGATAAATCCACTGGTGAGGGAGTCATTCGCTCCAAAGAGAAACTGGACTGTGAGCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS GCA 72 bp AATGACTCCCTCACCAGTGGATTTATCCACTACCACTaGATCAAAGGGGACATTCTGCCCGTGAATTTTAAA +
Preference number: 6 (lower is better)
Translates to: NDSLTSGFIHYH*IKGDILPVNFK
Trigger: TTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAATCCACTGGTGAGGGAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS CCA 72 bp GAATATGAACAGTTGCTTTATGAGACTTTTTCACGTTaGTGCCATCAGGTCCCTTCCCACAATCATAGGCCT +
Preference number: 6 (lower is better)
Translates to: EYEQLLYETFSR*CHQVPSHNHRP
Trigger: AGGCCTATGATTGTGGGAAGGGACCTGATGGCACCAACGTGAAAAAGTCTCATAAAGCAACTGTTCATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000650348.1
CDS CCA 72 bp TATATAACCATCTTTGTCAACAGTAAAGGGCACGTCTaGAGTGATGATTTCGTAGCTGCAAATCTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: YITIFVNSKGHV*SDDFVAANLAE
Trigger: TTCAGCCAGATTTGCAGCTACGAAATCATCACTCCAGACGTGCCCTTTACTGTTGACAAAGATGGTTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361311.4
ENST00000377298.9
ENST00000435891.5
ENST00000650348.1