RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLRN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000249581

Ensembl transcript IDs: ENST00000511148.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGATTCGTTCCGTCAGGTCGTGAAATTTCACCGCAGCCACGAAGCTaGCGATGGCTAACGCCACGACGCCGCCTGCCAGGACATTCCATA +
Preference number: 5 (lower is better)
Translates to: RFVPSGREISPQPRS*RWLTPRRRLPGHSI
Trigger: TATGGAATGTCCTGGCAGGCGGCGTCGTGGCGTTAGCCATCGCCAGCTTCGTGGCTGCGGTGAAATTTCACGACCTGACGGAACGAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS TCA 90 bp GGGTGCAGGTCATCCCCAAGGTCTCCGAGCAGCAGCGAGGGTCATTaGCATCTTTCAGATACTCGGCAATGCTCTGCTCCAAGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: GCRSSPRSPSSSEGH*HLSDTRQCSAPRSA
Trigger: AGCTGACCTTGGAGCAGAGCATTGCCGAGTATCTGAAAGATGTCAATGACCCTCGCTGCTGCTCGGAGACCTTGGGGATGACCTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS GCA 90 bp AATCTCAGGGAGGGGAATTTGACTGATCGCCACCACGACCAAGTTTaGAGCATGGGCCGAAGCGCTGGCCACGCAGATCCAAAACGACTC +
Preference number: 5 (lower is better)
Translates to: NLREGNLTDRHHDQV*SMGRSAGHADPKRL
Trigger: GAGTCGTTTTGGATCTGCGTGGCCAGCGCTTCGGCCCATGCTGCAAACTTGGTCGTGGTGGCGATCAGTCAAATTCCCCTCCCTGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 90 bp ACTGTTCTTCCACCACCACAAACTGGAAGAGCTTCTCCTGAAAGTTaGCGATTCGTTCCGTCAGGTCGTGAAATTTCACCGCAGCCACGA +
Preference number: 5 (lower is better)
Translates to: TVLPPPQTGRASPES*RFVPSGREISPQPR
Trigger: TCGTGGCTGCGGTGAAATTTCACGACCTGACGGAACGAATCGCCAACTTTCAGGAGAAGCTCTTCCAGTTTGTGGTGGTGGAAGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp CCGTCAGGTCGTGAAATTTCACCGCAGCCACGAAGCTaGCGATGGCTAACGCCACGACGCCGCCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: PSGREISPQPRS*RWLTPRRRLPG
Trigger: TCCTGGCAGGCGGCGTCGTGGCGTTAGCCATCGCCAGCTTCGTGGCTGCGGTGAAATTTCACGACCTGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp GGTCGTGAAATTTCACCGCAGCCACGAAGCTGGCGATaGCTAACGCCACGACGCCGCCTGCCAGGACATTCC +
Preference number: 6 (lower is better)
Translates to: GREISPQPRSWR*LTPRRRLPGHS
Trigger: GGAATGTCCTGGCAGGCGGCGTCGTGGCGTTAGCCATCGCCAGCTTCGTGGCTGCGGTGAAATTTCACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS GCA 72 bp GAGGGGAATTTGACTGATCGCCACCACGACCAAGTTTaGAGCATGGGCCGAAGCGCTGGCCACGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: EGNLTDRHHDQV*SMGRSAGHADP
Trigger: TGGATCTGCGTGGCCAGCGCTTCGGCCCATGCTGCAAACTTGGTCGTGGTGGCGATCAGTCAAATTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp ATGCCCCCAGGACCGCTGACTGCCCGGTACGGGACCTaGATCATGTTAAGAATGGCAAAGCCCATGCTGACC +
Preference number: 6 (lower is better)
Translates to: MPPGPLTARYGT*IMLRMAKPMLT
Trigger: GGTCAGCATGGGCTTTGCCATTCTTAACATGATCCAGGTCCCGTACCGGGCAGTCAGCGGTCCTGGGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp TCCTTCACCAGGTGTGGGAAGATCGTGAATTGGGATTaGCGGCCCCCAAGCCCACACTGCCGCACTTTACAC +
Preference number: 6 (lower is better)
Translates to: SFTRCGKIVNWD*RPPSPHCRTLH
Trigger: GTGTAAAGTGCGGCAGTGTGGGCTTGGGGGCCGCCAATCCCAATTCACGATCTTCCCACACCTGGTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 72 bp CTCCTTCACCAGGTGTGGGAAGATCGTGAATTGGGATaGGCGGCCCCCAAGCCCACACTGCCGCACTTTACA +
Preference number: 6 (lower is better)
Translates to: LLHQVWEDRELG*AAPKPTLPHFT
Trigger: TGTAAAGTGCGGCAGTGTGGGCTTGGGGGCCGCCAATCCCAATTCACGATCTTCCCACACCTGGTGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 90 bp TGGGTGCAGGTCATCCCCAAGGTCTCCGAGCAGCAGCGAGGGTCATaGACATCTTTCAGATACTCGGCAATGCTCTGCTCCAAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: WVQVIPKVSEQQRGS*TSFRYSAMLCSKVS
Trigger: GCTGACCTTGGAGCAGAGCATTGCCGAGTATCTGAAAGATGTCAATGACCCTCGCTGCTGCTCGGAGACCTTGGGGATGACCTGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp CCACCACGACCAAGTTTGCAGCATGGGCCGAAGCGCTaGCCACGCAGATCCAAAACGACTCTTCATACTGTT +
Preference number: 6 (lower is better)
Translates to: PPRPSLQHGPKR*PRRSKTTLHTV
Trigger: AACAGTATGAAGAGTCGTTTTGGATCTGCGTGGCCAGCGCTTCGGCCCATGCTGCAAACTTGGTCGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 72 bp GTCATCCCCAAGGTCTCCGAGCAGCAGCGAGGGTCATaGACATCTTTCAGATACTCGGCAATGCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: VIPKVSEQQRGS*TSFRYSAMLCS
Trigger: GGAGCAGAGCATTGCCGAGTATCTGAAAGATGTCAATGACCCTCGCTGCTGCTCGGAGACCTTGGGGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 90 bp AAGGAGGAGAAGCTGAGTAAAGACGCCAGCCCATACCACGCCTTTTaGAACCATCCAGGCATGCTAGTGGGTGCAGGTCATCCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: KEEKLSKDASPYHAF*NHPGMLVGAGHPQG
Trigger: ACCTTGGGGATGACCTGCACCCACTAGCATGCCTGGATGGTTCAAAAAGGCGTGGTATGGGCTGGCGTCTTTACTCAGCTTCTCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS TCA 72 bp TCATCCCCAAGGTCTCCGAGCAGCAGCGAGGGTCATTaGCATCTTTCAGATACTCGGCAATGCTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPRSPSSSEGH*HLSDTRQCSAP
Trigger: TGGAGCAGAGCATTGCCGAGTATCTGAAAGATGTCAATGACCCTCGCTGCTGCTCGGAGACCTTGGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS GCA 72 bp CAGGAAGAGGAGCAGCAGAATCATCACATGAAGGCCTaGGTTGAGCTCCTTCACCAGGTGTGGGAAGATCGT +
Preference number: 6 (lower is better)
Translates to: QEEEQQNHHMKA*VELLHQVWEDR
Trigger: ACGATCTTCCCACACCTGGTGAAGGAGCTCAACGCAGGCCTTCATGTGATGATTCTGCTGCTCCTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 72 bp AAGCTGAGTAAAGACGCCAGCCCATACCACGCCTTTTaGAACCATCCAGGCATGCTAGTGGGTGCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: KLSKDASPYHAF*NHPGMLVGAGH
Trigger: ATGACCTGCACCCACTAGCATGCCTGGATGGTTCAAAAAGGCGTGGTATGGGCTGGCGTCTTTACTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CCA 72 bp CCACCACCACAAACTGGAAGAGCTTCTCCTGAAAGTTaGCGATTCGTTCCGTCAGGTCGTGAAATTTCACCG +
Preference number: 6 (lower is better)
Translates to: PPPQTGRASPES*RFVPSGREISP
Trigger: CGGTGAAATTTCACGACCTGACGGAACGAATCGCCAACTTTCAGGAGAAGCTCTTCCAGTTTGTGGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS TCA 72 bp TCTTCGATTTTGGTCTTAATCTCAGGGAGGGGAATTTaGCTGATCGCCACCACGACCAAGTTTGCAGCATGG +
Preference number: 6 (lower is better)
Translates to: SSILVLISGRGI*LIATTTKFAAW
Trigger: CCATGCTGCAAACTTGGTCGTGGTGGCGATCAGTCAAATTCCCCTCCCTGAGATTAAGACCAAAATCGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511148.2
CDS CAA 72 bp CTCTTCGATTTTGGTCTTAATCTCAGGGAGGGGAATTaGACTGATCGCCACCACGACCAAGTTTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LFDFGLNLREGN*TDRHHDQVCSM
Trigger: CATGCTGCAAACTTGGTCGTGGTGGCGATCAGTCAAATTCCCCTCCCTGAGATTAAGACCAAAATCGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511148.2