RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLN6 (Homo sapiens)

Ensembl gene IDs: ENSG00000128973

Ensembl transcript IDs: ENST00000249806.11, ENST00000538696.5, ENST00000563917.2, ENST00000564752.1, ENST00000564846.1, ENST00000565471.6, ENST00000566347.5, ENST00000567060.5, ENST00000569336.2, ENST00000635747.1, ENST00000635754.1, ENST00000636020.1, ENST00000636212.1, ENST00000636314.1, ENST00000636674.1, ENST00000636876.1, ENST00000636964.1, ENST00000637223.1, ENST00000637329.1, ENST00000637450.1, ENST00000637494.1, ENST00000637667.1, ENST00000637823.1, ENST00000638076.1, ENST00000638144.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCAGCCCCCAGGAATGCAGGCGCTCAAAGCCTGTGGCTAGGCTaGCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: PPAPRNAGAQSLWLG*PKRVPQFFWSGSRG
Trigger: CCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCTGCATTCCTGGGGGCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR CCA 90 bp CGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTTaGGTAGAGGAGGGTCACCTGCAAAGCTGGAATGCCAGGGGAGTG +
Preference number: 1 (lower is better)
Translates to: RVPQFFWSGSRGTEL*VEEGHLQSWNARGV
Trigger: CACTCCCCTGGCATTCCAGCTTTGCAGGTGACCCTCCTCTACCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR TCA 90 bp GCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: AWQWDAQSPEPSSAV*SRTRGRGGREPCGQ
Trigger: CTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR CCA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTGAAGATGAAG +
Preference number: 1 (lower is better)
Translates to: KRKRPLLSRKRRLRF*CRTRASMAKKVKMK
Trigger: CTTCATCTTCACCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR TCA 90 bp CTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAACCTACTaGCCTACTTTGGGACCACAGGCCCATCTAGTGCAAATGAGGCCC +
Preference number: 1 (lower is better)
Translates to: LSQSCTQGVSATPTY*PTLGPQAHLVQMRP
Trigger: GGGCCTCATTTGCACTAGATGGGCCTGTGGTCCCAAAGTAGGTCAGTAGGTTGGGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR CCA 90 bp CCTCCTCCCTTGAAACCCTGGGCCACTCTGTCAAGGCAAAGCCTCTaGGCCCAGCACCTTGTAAAGGCTTTGATGAGAGGAGCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: PPPLKPWATLSRQSL*AQHLVKALMRGALA
Trigger: AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTGCTGGGCCCAGAGGCTTTGCCTTGACAGAGTGGCCCAGGGTTTCAAGGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR CCA 90 bp GTTGTAGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAATACCAGCATGGCAATGGGACGCCC +
Preference number: 1 (lower is better)
Translates to: VVGHVEVVPNTGLVE*KPLEREYQHGNGTP
Trigger: GGGCGTCCCATTGCCATGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR-3UTR GCA 90 bp GCGTCCCCGTGGCTGGGGGCTGACACATCCCTGGGCACCACTGTGACTTCCTGTAGCCTGTGGCTAGGCTaGCCGAAGCGCGTGCCGCAG +
Preference number: 2 (lower is better)
Translates to: ASPWLGADTSLGTTVTSCSLWLG*PKRVPQ
Trigger: CTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCT...ACAGGAAGTCACAGTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCAGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 2 (lower is better)
Translates to: RSRWKGAVRAASSALTEPGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...TGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636876.1
3UTR-3UTR GCA 90 bp GACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: DQVPVVQATGCHQEQGRPVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...GGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 2 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRASARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCCACCCAGCCCTCTCCTaGACGGCTACCAGAAGATGT +
Preference number: 2 (lower is better)
Translates to: PAKLECQGSGRCLQLLGAHPALS*TATRRC
Trigger: ACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTG...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CCA 90 bp GGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: GRGACASGAGRGPAWRRRRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRARCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CGATCTAGCAGAATGCCTTTGGTGAAAGGACAGGTGCGGCGAGGGGTGGGGGCCGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RSSRMPLVKGQVRRGVGAVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...GGCCCCCACCCCTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp TTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLSRKRRLRFWCRTRASMVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp TCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: SRKRRLRFWCRTRASMAKRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp TGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: CCPGRGACASGAGRGPAWRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: QEEALALLVQDEGQHGEERRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...TTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGCAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: RKRPLLSRKRRLRFWCRTQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: CPGRGACASGAGRGPAWRRCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp CACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: HSQATQSATSKRVSAKEERAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...CTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR GCA 90 bp GGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCATCTGTCCCAAAGCTaGACCCAAGGGGTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: GCPKRVPQFFWSGSRGTEHLSQS*TQGVSA
Trigger: TGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATG...CTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: CEGGEEEEAVAVQEEALAVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KRKRPLLSRKRRLRFWCRVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: QATQSATSKRVSAKEEKRRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: GRGACASGAGRGPAWRRRPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...CCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 2 (lower is better)
Translates to: EEEEAVAVQEEALALLVQSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...CTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TCATTCTTGAATCCCGCGTCCCCGTGGCTGGGGGCTGACACATCCCTGGGCACCGGTCACCTGCAAAGCTaGAATGCCAGGGGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SFLNPASPWLGADTSLGTGHLQS*NARGVG
Trigger: GCCCACTCCCCTGGCATTCCAGCTTTGCAGGTGACC...GGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATTCAAGAATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249806.11
3UTR-3UTR CCA 90 bp CACACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HTRIHAHEAHPTHALGLWRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 2 (lower is better)
Translates to: GSRAGSLISAHRAMHLRPNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...AGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
3UTR CAA 90 bp GCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTaGGGTAGAGGAGGGTCACCTGCAAAGCTGGAATGCCAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: ARAAVLLEWEQGDRA*GRGGSPAKLECQGS
Trigger: ACTCCCCTGGCATTCCAGCTTTGCAGGTGACCCTCCTCTACCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGCACCCAGCCCTCTCCTaGACGGCTACCAGAAGATGT +
Preference number: 2 (lower is better)
Translates to: RRSKPVARLPEARAAVLLHPALS*TATRRC
Trigger: ACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTG...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp CCTGGTGCCAGGGACTCAGTGCCGACTGCTGACGTGAAGGGTGTAGAAAGCCCACGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: PGARDSVPTADVKGVESPRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...TGGGCTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAGTCCCTGGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp TTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: LLSRKRRLRFWCRTRASMPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 2 (lower is better)
Translates to: QSLWLGCPKRVPQFFWSGHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...CCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CCA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: EGGEEEEAVAVQEEALALRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KEEKRKRPLLSRKRRLRFRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...GAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 2 (lower is better)
Translates to: GATRSRAGPGIKLSALEARCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...TGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCAGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 2 (lower is better)
Translates to: RCCPGRGACASGAGRGPAESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...TGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR CAA 90 bp AAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: KEEKRKRPLLSRKRR*RFWCRTRASMAKKV
Trigger: CACCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp TCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 2 (lower is better)
Translates to: SRKRRLRFWCRTRASMAKRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...CTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp CAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: QEEALALLVQDEGQHGEEAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...TTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp GACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 2 (lower is better)
Translates to: DQVPVVQATGCHQEQGRPPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...GGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000635747.1
3UTR-3UTR GCA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: EGGEEEEAVAVQEEALALRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CCACTGGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTACCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: PLGATRSRAGPGIKLSALPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...TAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: VRRRRRGRGRCCPGRGACPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: CPGRGACASGAGRGPAWREQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 2 (lower is better)
Translates to: ARRPRAPQARGSVRRRRRESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...TCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR CCA 90 bp GACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: DQVPVVQATGCHQEQGRPEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...GGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
3UTR-3UTR TCA 90 bp CCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 2 (lower is better)
Translates to: PGDPERHKQEGQCEGGEERSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...CTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp CGATCTAGCAGAATGCCTTTGGTGAAAGGACAGGTGCGGCGAGGGGTGGGGGCCAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 2 (lower is better)
Translates to: RSSRMPLVKGQVRRGVGARSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...GGCCCCCACCCCTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: CEGGEEEEAVAVQEEALAAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: SQATQSATSKRVSAKEEKTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...CTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 2 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGCAGGGGCCCGGATCCTaGCCCAGAAACACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: RKRRLRFWCRTRASMAKKQGPGS*PRNTLK
Trigger: TTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG...CTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TCATTCTTGAATCCCGCGTCCCCGTGGCTGGGGGCTGACACATCCCTGGGCACCTCAAGGCAAAGCCTCTaGGCCCAGCACCTTGTAAAG +
Preference number: 2 (lower is better)
Translates to: SFLNPASPWLGADTSLGTSRQSL*AQHLVK
Trigger: CTTTACAAGGTGCTGGGCCCAGAGGCTTTGCCTTGA...GGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATTCAAGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249806.11
3UTR-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: CPGRGACASGAGRGPAWRKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: SQATQSATSKRVSAKEEKEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGAGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 2 (lower is better)
Translates to: RGRGRCCPGRGACASGAGESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...TCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR CCA 90 bp CCACTGGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTACTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 2 (lower is better)
Translates to: PLGATRSRAGPGIKLSALLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...TAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR TCA 90 bp GGGGAGGTTCCTCCTCCCTTGAAACCCTGGGCCACTCTGTCAAGGCAAAGCCTCGCAACCCCAACCTACTaGCCTACTTTGGGACCACAG +
Preference number: 2 (lower is better)
Translates to: GEVPPPLKPWATLSRQSLATPTY*PTLGPQ
Trigger: CTGTGGTCCCAAAGTAGGTCAGTAGGTTGGGGTTGC...GAGGCTTTGCCTTGACAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: KRKRPLLSRKRRLRFWCRTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...CCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CAGCTCAAAGGAGTCGATCAGCGTCTCCGGCTTGAGATTCTTGATGATGGGGTTGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 2 (lower is better)
Translates to: QLKGVDQRLRLEILDDGVGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...AACCCCATCATCAAGAATCTCAAGCCGGAGACGCTGATCGACTCCTTTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635747.1
3UTR-3UTR TCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 2 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGCCCAGAAAGGAGAAATaGTTTGCTCAACAGCCACAG +
Preference number: 2 (lower is better)
Translates to: RRSKPVARLPEARAAVLLPRKEK*FAQQPQ
Trigger: CTGTGGCTGTTGAGCAAAGCATTTCTCCTTTCTGGG...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: RKRPLLSRKRRLRFWCRTRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: GCHQEQGRPWNQALSFRGRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 2 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
3UTR-3UTR CCA 90 bp GTCAGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: VSAKEEKRKRPLLSRKRRKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...GCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp CCACTGGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: PLGATRSRAGPGIKLSALRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...TAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GGGCTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: GLRDVDDTRVLLPENRVITPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...AATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 2 (lower is better)
Translates to: GRCCPGRGACASGAGRGPENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...TGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp GGAGGGCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: GGQGPGSWPRNTLKQNPIRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGAAGTACCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 2 (lower is better)
Translates to: GPGIKLSALEAVKQPLKYHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...GTACTTCAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: HQEQGRPWNQALSFRGSKEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...TTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GATCTTGAGCAAGAGAAAGGGCGTGATGACGTTGTAGGCCATGTGGAAGTAGTCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 2 (lower is better)
Translates to: DLEQEKGRDDVVGHVEVVNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GACTACTTCCACATGGCCTACAACGTCATCACGCCCTTTCTCTTGCTCAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637223.1
3UTR-3UTR CCA 90 bp CCAGTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PVLQCEVEPEVEVEGSRAIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR-3UTR GCA 90 bp TGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: CTTCSDPGTHHNSRAAQRVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GGTGAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 2 (lower is better)
Translates to: GEDEEDEDLALGDQVPVVHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...TACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: CTTCSDPGTHHNSRAAQRRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTCCAAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: LRDVDDTRVLLPENRVIPKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...TGGAATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CGTGATGACGTTGTAGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTGAGGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: RDDVVGHVEVVPNTGLVEEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...CTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCTACAACGTCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR-3UTR TCA 90 bp CGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACAATCCGATCCTGAGATaGTCCAAATCAAACAGAAAC +
Preference number: 2 (lower is better)
Translates to: RTRGTPHSCSRSLVTHPHNPILR*SKSNRN
Trigger: GTTTCTGTTTGATTTGGATCATCTCAGGATCGGATT...GTGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCAGGGTCAGGGTGGGCCTaGGGGATGAGCCAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: SNRNLTEIVESENDALCAGSGWA*GMSQVV
Trigger: CACCACCTGGCTCATCCCTCAGGCCCACCCTGACCC...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
3UTR-3UTR TCA 90 bp GAGGAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: EEEGDVPHAVTQVLIIIVRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...TACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR CCA 90 bp CAGCTCAAAGGAGTCGATCAGCGTCTCCGGCTTGAGATTCTTGATGATGGGGTTAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: QLKGVDQRLRLEILDDGVKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...AACCCCATCATCAAGAATCTCAAGCCGGAGACGCTGATCGACTCCTTTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR TCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACCAGGTGGTGGGCAGGTaGCACACCAGGTCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: NLTEIVESENDALCAHIYQVVGR*HTRSPP
Trigger: AGGAGGGGACCTGGTGTGTCACCTGCCCACCACCTG...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
3UTR-3UTR TCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACAGGTGGTGGGCAGGTaGCACACCAGGTCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SNRNLTEIVESENDALCAQVVGR*HTRSPP
Trigger: AGGAGGGGACCTGGTGTGTCACCTGCCCACCACCTG...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
3UTR-3UTR TCA 90 bp GTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGCAGAATGCCTTTGGTaGAAGGACAGGTGCGGCGAG +
Preference number: 2 (lower is better)
Translates to: VPHAVTQVLIIIVEQLKGAECLW*KDRCGE
Trigger: CTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGC...TCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 2 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR GCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 2 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp GAGGAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTACTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 2 (lower is better)
Translates to: EEEGDVPHAVTQVLIIIVLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...TACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR CCA 90 bp CAGCTCAAAGGAGTCGATCAGCGTCTCCGGCTTGAGATTCTTGATGATGGGGTTACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QLKGVDQRLRLEILDDGVTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...AACCCCATCATCAAGAATCTCAAGCCGGAGACGCTGATCGACTCCTTTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635747.1
3UTR-3UTR TCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTAACAGAATCCGATCCTaGGATGATCCAAATCAAACA +
Preference number: 2 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSNRIRS*DDPNQT
Trigger: TGTTTGATTTGGATCATCTCAGGATCGGATTCTGTT...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
3UTR-3UTR TCA 90 bp CTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTAGCAGAATGCCTTTGGGCAGAATGCCTTTGGTaGAAGGACAGGTGCGGCGAG +
Preference number: 2 (lower is better)
Translates to: LIIIVEQLKGVDLAECLWAECLW*KDRCGE
Trigger: CTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGC...CCAAAGGCATTCTGCTAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp CTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTAGCAGAATGCCTTTGGCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 2 (lower is better)
Translates to: LIIIVEQLKGVDLAECLWHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...CCAAAGGCATTCTGCTAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
3UTR-3UTR TCA 90 bp CATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 2 (lower is better)
Translates to: HAVTQVLIIIVEQLKGVDPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...ATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR-3UTR GCA 90 bp CAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGAGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 2 (lower is better)
Translates to: QGPGSWPRNTLKQNPILRENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...TCTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp AACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 2 (lower is better)
Translates to: NRNLTEIVESENDALCAHRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...GTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR TCA 90 bp CAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTTGAGCAAGAGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 2 (lower is better)
Translates to: QVLIIIVEQLKGVDLEQEQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CTCTTGCTCAAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637223.1
3UTR-3UTR GCA 90 bp CATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 2 (lower is better)
Translates to: HAVTQVLIIIVEQLKGVDRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...ATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: CTTCSDPGTHHNSRAAQRTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR-3UTR GCA 90 bp TTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAAGACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: LTEIVESENDALCAHIYKTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...CTTGTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACAGGGGCCCGGATCCTaGCCCAGAAACACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: SNRNLTEIVESENDALCAQGPGS*PRNTLK
Trigger: TTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
3UTR-3UTR CCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: NLTEIVESENDALCAHIYKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR CCA 72 bp CCTCCAGCCCCCAGGAATGCAGGCGCTCAAAGCCTGTaGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTC +
Preference number: 3 (lower is better)
Translates to: PPAPRNAGAQSL*LGCPKRVPQFF
Trigger: GAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCTGCATTCCTGGGGGCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CAA 90 bp GCGTCCCCGTGGCTGGGGGCTGACACATCCCTGGGCACCACTGTGACTTCCTGTTTTTGCTCAGGGCCTTaGGCACCCCACCCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: ASPWLGADTSLGTTVTSCFCSGP*APHPPA
Trigger: GGCTGGAGGGTGGGGTGCCAAAGGCCCTGAGCAAAA...ACAGGAAGTCACAGTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR GCA 72 bp CCCAGGAATGCAGGCGCTCAAAGCCTGTGGCTAGGCTaGCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: PRNAGAQSLWLG*PKRVPQFFWSG
Trigger: CCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCTGCATTCCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR CCA 72 bp AGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTaGGAGCAGGGGGACAGAGCTTTGGGTAGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: RLPEARAAVLLE*EQGDRALGRGG
Trigger: CCCTCCTCTACCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR TCA 72 bp GCCAGAGCCTGGTGCCAGGGACTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAGCCCAGGGCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: ARAWCQGLSADC*REGCRKPRAQG
Trigger: TCCCTGAGCCCTGGGCTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAGTCCCTGGCACCAGGCTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
3UTR CCA 72 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: RPLLSRKRRLRF*CRTRASMAKKV
Trigger: CACCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CAA 90 bp TTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 3 (lower is better)
Translates to: LLSRKRRLRFWCRTRASMSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CAA 90 bp AGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 3 (lower is better)
Translates to: RKRRLRFWCRTRASMAKKKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...CTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR-3UTR CAA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 3 (lower is better)
Translates to: EDEDLALGDQVPVVQATGSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CAA 90 bp CCTGGTGCCAGGGACTCAGTGCCGACTGCTGACGTGAAGGGTGTAGAAAGCCCAAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 3 (lower is better)
Translates to: PGARDSVPTADVKGVESPKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...TGGGCTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAGTCCCTGGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637329.1
3UTR TCA 72 bp TTCATTCTTGAATCCCGCGTCCCCGTGGCTGGGGGCTaGCACATCCCTGGGCACCACTGTGACTTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: FILESRVPVAGG*HIPGHHCDFLW
Trigger: CCACAGGAAGTCACAGTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATTCAAGAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249806.11
3UTR-3UTR CAA 90 bp AGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 3 (lower is better)
Translates to: RAGPGIKLSALEAVKQPLSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
3UTR-3UTR CAA 90 bp TGGGTAGAGGAGGGTCACCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: WVEEGHLQSWNARGVGGASSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...GGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGGTGACCCTCCTCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
3UTR-3UTR CAA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 3 (lower is better)
Translates to: EGGEEEEAVAVQEEALALKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
3UTR TCA 72 bp GGAAGGGTCCTAGGTAGGGGGAGGTTCCTCCTCCCTTaGAACCCTGGGCCACTCTGTCAAGGCAAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: GRVLGRGRFLLP*NPGPLCQGKAS
Trigger: AGAGGCTTTGCCTTGACAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCTCCCCCTACCTAGGACCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CAA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGCACCTTGTAAAGGCTTaGATGAGAGGAGCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: RRSKPVARLPEARAAVLLHLVKA*MRGALA
Trigger: AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTG...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CAA 90 bp GAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTTCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: EEALALLVQDEGQHGEEGSSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...ACCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR TCA 72 bp TGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCG +
Preference number: 3 (lower is better)
Translates to: WDAQSPEPSSAV*SRTRGRGGREP
Trigger: CGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR CCA 72 bp CAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTTaGGTAGAGGAGGGTCACCTGCAAAGCTGGAATGCC +
Preference number: 3 (lower is better)
Translates to: QFFWSGSRGTEL*VEEGHLQSWNA
Trigger: GGCATTCCAGCTTTGCAGGTGACCCTCCTCTACCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR TCA 72 bp AGCTGCACCCAAGGGGTGTCAGCAACCCCAACCTACTaGCCTACTTTGGGACCACAGGCCCATCTAGTGCAA +
Preference number: 3 (lower is better)
Translates to: SCTQGVSATPTY*PTLGPQAHLVQ
Trigger: TTGCACTAGATGGGCCTGTGGTCCCAAAGTAGGTCAGTAGGTTGGGGTTGCTGACACCCCTTGGGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR CCA 72 bp ACTGTATTTACTTCATTCTTGAATCCCGCGTCCCCGTaGCTGGGGGCTGACACATCCCTGGGCACCACTGTG +
Preference number: 3 (lower is better)
Translates to: TVFTSFLNPASP*LGADTSLGTTV
Trigger: CACAGTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATTCAAGAATGAAGTAAATACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249806.11
3UTR-3UTR CAA 90 bp GGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGAATCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 3 (lower is better)
Translates to: GRPWNQALSFRGSKAAAESPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...TTCAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635747.1
3UTR CCA 72 bp AAGAGCAGGCGGTGGTTGACAGAGTCACCCACCAGGTaGATGCTGGCACCCATGATGAAGATGATGATGCTC +
Preference number: 3 (lower is better)
Translates to: KSRRWLTESPTR*MLAPMMKMMML
Trigger: GAGCATCATCATCTTCATCATGGGTGCCAGCATCCACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637329.1
3UTR-3UTR CAA 90 bp GGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGAATCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 3 (lower is better)
Translates to: GRPWNQALSFRGSKAAAESSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...TTCAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
3UTR TCA 72 bp AGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAGGGAATACCAGCATGG +
Preference number: 3 (lower is better)
Translates to: RPCGSSPQHWAC*VETTREGIPAW
Trigger: CCATGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR CCA 72 bp TTGAAACCCTGGGCCACTCTGTCAAGGCAAAGCCTCTaGGCCCAGCACCTTGTAAAGGCTTTGATGAGAGGA +
Preference number: 3 (lower is better)
Translates to: LKPWATLSRQSL*AQHLVKALMRG
Trigger: TCCTCTCATCAAAGCCTTTACAAGGTGCTGGGCCCAGAGGCTTTGCCTTGACAGAGTGGCCCAGGGTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
3UTR-3UTR CAA 90 bp GAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 3 (lower is better)
Translates to: EGDVPHAVTQVLIIIVEQPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...CTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
3UTR TCA 72 bp AAAGGAGAAATGCTTTGCTCAACAGCCACAGTAGGCTaGCGTAACCTATGTAATGTAGGGTCAGGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: KGEMLCSTATVG*RNLCNVGSGWA
Trigger: GGCCCACCCTGACCCTACATTACATAGGTTACGTCAGCCTACTGTGGCTGTTGAGCAAAGCATTTCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCAGGCTGCCTGGTGCCATaGGGTTGGGCCGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSRWKGAVRAASSALTEPGCLVP*GWAAGP
Trigger: TGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCC...TGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp GCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCTCCGCGTCGCCTCCATaGCTGCCCCGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AVQEEALALLVQDEGQHGSASPP*LPRRPL
Trigger: GAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGA...GCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCCTGGGCGCGGCTCTaGGGAGGGTCAGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: RGGREPCGQPHQRSQSHASWARL*GGSGCA
Trigger: CGCGCACCCTGACCCTCCCCAGAGCCGCGCCCAGGA...TGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp CGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTTGGGGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSACRSSSGVGAGGQSFGVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...CCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: CPGRGACASGAGRGPAWRVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCAGCCTGTGGCTAGGCTaGCCGAAGCGCGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: AARSACRSSSGVGAGGQSSLWLG*PKRVPQ
Trigger: CTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCT...GCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGTCCGCGTCGCCTCCATaGCTGCCCCGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRSKPVARLPEARAAVLLSASPP*LPRRPL
Trigger: GAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGA...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp GGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATCCTGCGCCAGTGGCTTaGAGGCTCGGCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRGGREPCGQPHQRSQSHPAPVA*RLGSSP
Trigger: CGGGCTTGAGCCGAGCCTTCAAGCCACTGGCGCAGG...ATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp AGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKRRLRFWCRTRASMAKKVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...CTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVAVQEEALALLVQDEGQGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCACCTGGCCTGACTTCTaGAGGCCTCTCCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: EVEVEGSRAGSLISAHRATWPDF*RPLPAS
Trigger: GCTGGCGGGGAGAGGCCTGCAGAAGTCAGGCCAGGT...GGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR TCA 90 bp CAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGGGGTCAGGGTGGGCCTaGGGGATGAGCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSLWLGCPKRVPQFFWSGGSGWA*GMSQVV
Trigger: CACCACCTGGCTCATCCCTCAGGCCCACCCTGACCC...CCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp CCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGCCCGTGGCTGGGGGCTaGCACATCCCTGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: PGDPERHKQEGQCEGGEEPVAGG*HIPGHH
Trigger: GTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGG...CTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR GCA 90 bp CTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: LALGDQVPVVQATGCHQEGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: SRKRRLRFWCRTRASMAKGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRAVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGCCGGGTGCGGTGGCTCTGGGGGCTGCCTGGTaGCATGCGGTTGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LISAHRAMHLRPRPGAVALGAAW*HAVGPR
Trigger: CCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAG...AGCCACCGCACCCGGCCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp GCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGCCGGGTTGGGGAGGGTCAGGGTaGGCGTCCCACCGCGTCGTG +
Preference number: 4 (lower is better)
Translates to: AGSLISAHRAMHLRPRPGWGGSG*ASHRVV
Trigger: CACGACGCGGTGGGACGCGCACCCTGACCCTCCCCA...ACCCGGCCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp AGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGTCTCTGGCCGGGGCCTaGCTCTCGCTCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKRPLLSRKRRLRFWCRTSLAGA*LSLAAP
Trigger: AGGAGCGGCGAGCGAGAGGCAGGCCCCGGCCAGAGA...CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CCA 90 bp GAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACTCCGCGTCGCCTCCATaGCTGCCCCGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EDLALGDQVPVVQATGCHSASPP*LPRRPL
Trigger: GAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGA...GTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EVEVEGSRAGSLISAHRANQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp GTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCTGGTGCCATGCGGTTaGGCCGCGGGCCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VEPEVEVEGSRAGSLISALVPCG*AAGPRE
Trigger: TTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAG...AGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp AGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGCCGCTGGGGGCTGCCTaGTGCCATGCGGTTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRAGSLISAHRAMHLRPRPLGAA*CHAVGP
Trigger: CGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGG...CCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp AGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGATCCTGGGCGCGGCTCTaGGGAGGGTCAGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: RGRGRCCPGRGACASGAGSWARL*GGSGCA
Trigger: CGCGCACCCTGACCCTCCCCAGAGCCGCGCCCAGGA...TCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR TCA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCAGGTTCCTCCTCCCTTaGAACCCTGGGCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: PAKLECQGSGRCLQLLGARFLLP*NPGPLC
Trigger: ACAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCT...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp CTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: LALGDQVPVVQATGCHQEQAPRP*LSEEET
Trigger: GGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTG...CTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGACAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: PGRGACASGAGRGPAWRRQAPRP*LSEEET
Trigger: GGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTG...TCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGCAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: SRKRRLRFWCRTRASMAKQAPRP*LSEEET
Trigger: GGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTG...CTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: KEEKRKRPLLSRKRRLRFVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...GAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDQVPVVQATGCHQEQGRVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRARLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCAAATACCGCTGGGGGCTaGCTGGTGCCATGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGGREPCGQPHQRSQSHANTAGG*LVPCGW
Trigger: CCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATT...TGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp AGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGTCTCTGGCCGGGGCCTaGCTCTCGCTCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRAGSLISAHRAMHLRPRSLAGA*LSLAAP
Trigger: AGGAGCGGCGAGCGAGAGGCAGGCCCCGGCCAGAGA...CCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCTCCGCGTCGCCTCCATaGCTGCCCCGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTSASPP*LPRRPL
Trigger: GAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGA...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000638076.1
CDS-3UTR CCA 90 bp GACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: DQVPVVQATGCHQEQGRPNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRANQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: PAKLECQGSGRCLQLLGAESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CCPGRGACASGAGRGPAWRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTTGGGGGAATGCCAGGGGAGTaGGCGGTGCCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSACRSSSGVGAGGQSFGGMPGE*AVPPAP
Trigger: AGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCC...CCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGGCGCTCAAAGCCTGTaGCTAGGCTGCCCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RRSKPVARLPEARAAVLLGAQSL*LGCPKR
Trigger: GCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCC...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCACACGCATCCCTTCCCTaGGCTTCTCCGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: GRCCPGRGACASGAGRGPHASLP*ASPAHL
Trigger: CAGGTGTGCCGGAGAAGCCCAGGGAAGGGATGCGTG...TGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CCA 90 bp CGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCACACGCATCCCTTCCCTaGGCTTCTCCGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: RGGREPCGQPHQRSQSHAHASLP*ASPAHL
Trigger: CAGGTGTGCCGGAGAAGCCCAGGGAAGGGATGCGTG...TGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR CCA 90 bp CCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGATGGCGCCTGCGCCAGTaGCTTGAAGGCTCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PEVEVEGSRAGSLISAHRWRLRQ*LEGSAQ
Trigger: TTGAGCCGAGCCTTCAAGCCACTGGCGCAGGCGCCA...TCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR TCA 90 bp GGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GRCCPGRGACASGAGRGPRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...TGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACCAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDQAPRP*LSEEET
Trigger: GGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTG...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp ATGTCCGGGAAGAACAGACTAGCCCTGAGTAGGGAGTGTGGTCAGGTGCAGAGGGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: MSGKNRLALSRECGQVQRVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...CCTCTGCACCTGACCACACTCCCTACTCAGGGCTAGTCTGTTCTTCCCGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp GAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EQGRPWNQALSFRGSKAAVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...GGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCACTGGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLGATRSRAGPGIKLSALGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...TAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: VRRRRRGRGRCCPGRGACGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...GCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QEEALALLVQDEGQHGEEVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...TTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRAPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: DQVPVVQATGCHQEQGRPPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: ARRPRAPQARGSVRRRRRSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...TCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCAGTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGTCTCTGGCCGGGGCCTaGCTCTCGCTCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLQCEVEPEVEVEGSRASLAGA*LSLAAP
Trigger: AGGAGCGGCGAGCGAGAGGCAGGCCCCGGCCAGAGA...CGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGATCACAGAGCCATGCCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CPGRGACASGAGRGPAWRSQSHA*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGCATGGCTCTGTGA...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CPGRGACASGAGRGPAWRNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PGRGACASGAGRGPAWRRNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...TCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCCGCGTCCCCGTGGCTaGGGGCTGACACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RTEPLICPKAAPKGCQQPPRPRG*GLTHPW
Trigger: CCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGG...GGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000249806.11
CDS-3UTR CCA 90 bp GGTGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAGGTCGCAATACCGCTaGGGGCTGCCTGGTGCCATG +
Preference number: 4 (lower is better)
Translates to: GGREPCGQPHQRSQSHASRSQYR*GLPGAM
Trigger: CATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCT...AGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636876.1
3UTR CAA 72 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: KRKRPLLSRKRR*RFWCRTRASMA
Trigger: CGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSLWLGCPKRVPQFFWSGRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...CCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp CTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LGDQVPVVQATGCHQEQGRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...GCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR TCA 90 bp AGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RGRCCPGRGACASGAGRGRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...CCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCGGGTCAGGGTGGGCCTaGGGGATGAGCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCGSGWA*GMSQVV
Trigger: CACCACCTGGCTCATCCCTCAGGCCCACCCTGACCC...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp ACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACCCGTGGCTGGGGGCTaGCACATCCCTGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: TNPRTRGTPHSCSRSLVTPVAGG*HIPGHH
Trigger: GTGGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGG...TGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp GCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGCCGGGTGGGACTGAGCGCGACTaGCGCAGAGGTCGCAATACC +
Preference number: 4 (lower is better)
Translates to: AGSLISAHRAMHLRPRPGGTERD*RRGRNT
Trigger: GGTATTGCGACCTCTGCGTCAGTCGCGCTCAGTCCC...ACCCGGCCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR GCA 90 bp GAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGTCGCTCCCAGGTGCTaGCGCCTCCGCGTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EEDEDLALGDQVPVVQATVAPRC*RLRVAS
Trigger: GGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGAC...AGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: HTNPRTRGTPHSCSRSLVGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...AACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCAGTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: PVLQCEVEPEVEVEGSRAGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS-3UTR GCA 90 bp GAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EDLALGDQVPVVQATGCHVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...GTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STHTRHTPLMLSVSGYTPVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...GGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: DLALGDQVPVVQATGCHQRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: STHTRHTPLMLSVSGYTPSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...GGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGTCCGCGTCGCCTCCATaGCTGCCCCGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TRSRAGPGIKLSALEAVKSASPP*LPRRPL
Trigger: GAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGA...CTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LQCEVEPEVEVEGSRAGSNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GCTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS-3UTR CCA 90 bp AGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: RPLLSRKRRLRFWCRTRAESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...GGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEEEAVAVQEEALALLVQRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GTGGTGCTGGTAGCCACTGAAGAGCAGGCGGTGGTTGACAGAGTCACCCACCAGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VVLVATEEQAVVDRVTHQRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAGTGGCTACCAGCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR CCA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KRKRPLLSRKRRLRFWCRRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGCAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KRKRPLLSRKRRLRFWCRQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...CCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GTCAGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCCAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VSAKEEKRKRPLLSRKRRQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...GCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACGGAATGCCAGGGGAGTaGGCGGTGCCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTRGTPHSCSRSLVTHPHGMPGE*AVPPAP
Trigger: AGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCC...GTGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp TTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FHSQATQSATSKRVSAKERCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...CTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EEEAVAVQEEALALLVQDRCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...GTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CATTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGTGCGGCGAGGGGTaGGGGCCATTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HSTARRPRAPQARGSVRRRCGEG*GPFLQP
Trigger: AGGCTGAAGAAATGGCCCCCACCCCTCGCCGCACCT...CCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGGACCGCTCGATGAGCTaGGGTTCAGAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQATQSATSKRVSAKEEDRSMS*GSEWGW
Trigger: CCAACCCCACTCTGAACCCCAGCTCATCGAGCGGTC...CTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR TCA 90 bp GGAGGGCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCAGGTGGTGGGCAGGTaGCACACCAGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGQGPGSWPRNTLKQNPIQVVGR*HTRSPP
Trigger: AGGAGGGGACCTGGTGTGTCACCTGCCCACCACCTG...GATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR TCA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCTATTTACTTCATTCTTaGATCCCGCGTCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PAKLECQGSGRCLQLLGAYLLHS*IPRPRG
Trigger: GCCACGGGGACGCGGGATTCAAGAATGAAGTAAATA...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249806.11
CDS-3UTR GCA 90 bp CAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTCAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: QPSPARLPEDVREEQTSPQAPRP*LSEEET
Trigger: GGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTG...AGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp CACACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: HTRIHAHEAHPTHALGLWRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: EDEDLALGDQVPVVQATGSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RTRGTPHSCSRSLVTHPHNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GTGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGCTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: GRGACASGAGRGPAWRRRLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...CCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: THTRHTPLMLSVSGYTPTQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...TGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: LALGDQVPVVQATGCHQEHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...CTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCTTTGGGCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: RSACRSSSGVGAGGQSFGHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...CCCAAAGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCGGTGCCTCCAGCTCCTaGGGGCCAGGGTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTGASSS*GPGCLH
Trigger: ATGGAGACACCCTGGCCCCCAGGAGCTGGAGGCACC...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGGGTGCCTCCAGCTCCTaGGGGCCAGGGTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLGASSS*GPGCLH
Trigger: ATGGAGACACCCTGGCCCCCAGGAGCTGGAGGCACC...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp TTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FHSQATQSATSKRVSAKEAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...CTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: QSLWLGCPKRVPQFFWSGLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...CCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp AGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCAGGTGGTGGGCAGGTaGCACACCAGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRAGPGIKLSALEAVKQPQVVGR*HTRSPP
Trigger: AGGAGGGGACCTGGTGTGTCACCTGCCCACCACCTG...CGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp CAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGAGGGTCAGGGTGGGCCTaGGGGATGAGCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QGPGSWPRNTLKQNPILRGSGWA*GMSQVV
Trigger: CACCACCTGGCTCATCCCTCAGGCCCACCCTGACCC...TCTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR TCA 90 bp GTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCCCTGTATCTAGGGACTaGGCGCGACTGACGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLQCEVEPEVEVEGSRAGPVSRD*ARLTQR
Trigger: CCTCTGCGTCAGTCGCGCTCAGTCCCTAGATACAGG...GCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR TCA 90 bp GGACCGCTCGATGAGCTTGAGCAAGAGAAAGGGCGTGATGACGTTGTAGGCCATCCTGCGCCAGTGGCTTaGAGGCTCGGCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: GPLDELEQEKGRDDVVGHPAPVA*RLGSSP
Trigger: CGGGCTTGAGCCGAGCCTTCAAGCCACTGGCGCAGG...ATGGCCTACAACGTCATCACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR GCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp AGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCACGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: RRGRGRCCPGRGACASGARLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...TGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGACCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RRPRAPQARGSVRRRRRGPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...TCCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CEGGEEEEAVAVQEEALAPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp AGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RGRCCPGRGACASGAGRGTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...CCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGCATCTGTCCCAAAGCTaGACCCAAGGGGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRGACASGAGRGPAWRRRHLSQS*TQGVSA
Trigger: TGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATG...CCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR GCA 90 bp CAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTCCTGCAAAGCTGGAATaGCAGGGGAGTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QPSPARLPEDVREEQTSPPAKLE*QGSGRC
Trigger: GCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG...AGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp AGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGCTGCCCGAAGCGCGTaGCGCAGTTCTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RRGRGRCCPGRGACASGAAARSA*RSSSGV
Trigger: CACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGC...TGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR GCA 90 bp CAAAGCCTCTGGGCCCAGCACCTTGTAAAGGCTTTGATGAGAGGAGCTCTGGCTAGCCTGTGGCTAGGCTaGCCGAAGCGCGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSLWAQHLVKALMRGALASLWLG*PKRVPQ
Trigger: CTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCT...AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTGCTGGGCCCAGAGGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTGGGATGTACCTGGCCTaGAGGAAGGAGGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSGMYLA*RKEAPS
Trigger: GCTGGGCGCCTCCTTCCTGCAGGCCAGGTACATCCC...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565471.6
CDS-3UTR CCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: HTNPRTRGTPHSCSRSLVNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...AACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGCATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AARSACRSSSGVGAGGQSIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...GCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: SQATQSATSKRVSAKEEKESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...CTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RRSKPVARLPEARAAVLLEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CAGAAGAACTGCGGCACGCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GDQVPVVQATGCHQEQGREQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR CCA 90 bp GCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGCAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGARILAQKHSKTESDPEQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...CTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ATGTCCGGGAAGAACAGACTAGCCCTGAGTAGGGAGTGTGGTCAGGTGCAGAGGAATCCCGCGTCCCCGTaGCTGGGGGCTGACACATCC +
Preference number: 4 (lower is better)
Translates to: MSGKNRLALSRECGQVQRNPASP*LGADTS
Trigger: GGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATT...CCTCTGCACCTGACCACACTCCCTACTCAGGGCTAGTCTGTTCTTCCCGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249806.11
CDS-3UTR TCA 90 bp GCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ALGDQVPVVQATGCHQEQPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...CTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGTAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: EEALALLVQDEGQHGEEGRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...ACCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp AGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGAGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRPRAPQARGSVRRRRRGAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...TCCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: QATQSATSKRVSAKEEKRLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...CCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EEEAVAVQEEALALLVQDLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...GTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGGCAACCCCAACCTACTaGCCTACTTTGGGACCACAG +
Preference number: 4 (lower is better)
Translates to: QATQSATSKRVSAKEEKRATPTY*PTLGPQ
Trigger: CTGTGGTCCCAAAGTAGGTCAGTAGGTTGGGGTTGC...CCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGAGGTTCCTCCTCCCTTaGAACCCTGGGCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: CEGGEEEEAVAVQEEALARFLLP*NPGPLC
Trigger: ACAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCT...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGCAGAATGCCTTTGGTaGAAGGACAGGTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: EEEEAVAVQEEALALLVQAECLW*KDRCGE
Trigger: CTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGC...CTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCCAAAGTCCAGAACCCAGTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: PKVQNPVLQCEVEPEVEVGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGGTTCTGGACTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR GCA 90 bp GGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: GRCCPGRGACASGAGRGPRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...TGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp ACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TNPRTRGTPHSCSRSLVTRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...TGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTGCTGCCCGAAGCGCGTaGCGCAGTTCTTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSAARSA*RSSSGV
Trigger: CACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGC...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp GGAGGGCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCTCCAGCCCCCAGGAATaGAGGCGCTCAAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GGQGPGSWPRNTLKQNPISSPQE*RRSKPV
Trigger: CACAGGCTTTGAGCGCCTGCATTCCTGGGGGCTGGA...GATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGAACCAGAGGTCGAGGTaGAAGGGAGCCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SRAGPGIKLSALEAVKQPNQRSR*KGAVRA
Trigger: TGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTT...CGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AVAVQEEALALLVQDEGQIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CPGRGACASGAGRGPAWREGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...TCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AVQEEALALLVQDEGQHGTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...GCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGCTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: EEEEAVAVQEEALALLVQLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...CTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR CCA 90 bp CAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QEEALALLVQDEGQHGEEEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...TTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALGDQVPVVQATGCHQEQKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...CTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRSRAGPGIKLSALEAVKRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...CTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACCAGGGGCCCGGATCCTaGCCCAGAAACACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDQGPGS*PRNTLK
Trigger: TTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR CCA 90 bp CAAAGCCTCTGGGCCCAGCACCTTGTAAAGGCTTTGATGAGAGGAGCTCTGGCTGCCTGGGCAGGGGTCTaGAGTGCACATAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QSLWAQHLVKALMRGALAAWAGV*SAHSPQ
Trigger: CTGGGGGCTATGTGCACTCCAGACCCCTGCCCAGGC...AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTGCTGGGCCCAGAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp TGGGTAGAGGAGGGTCACCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCAAGGCAAAGCCTCTaGGCCCAGCACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: WVEEGHLQSWNARGVGGASRQSL*AQHLVK
Trigger: CTTTACAAGGTGCTGGGCCCAGAGGCTTTGCCTTGA...GGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGGTGACCCTCCTCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCTGGCGCCTGCGCCAGTaGCTTGAAGGCTCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: EQGRPWNQALSFRGSKAAWRLRQ*LEGSAQ
Trigger: TTGAGCCGAGCCTTCAAGCCACTGGCGCAGGCGCCA...GGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CCA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACAGAAGGGGATGTACCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHRRGCT*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGTACATCCCCTTCT...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565471.6
3UTR CAA 72 bp AGAGCAGCTCAAAGGAGTCGATCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGGCGAGGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RAAQRSRSSRMP*VKGQVRRGVGA
Trigger: GGCCCCCACCCCTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGATCGACTCCTTTGAGCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAACAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: QEEALALLVQDEGQHGEEQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...TTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CATTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: HSTARRPRAPQARGSVRRQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GCCACTGGGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: ATGCHQEQGRPWNQALSFQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACCCAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAAGCCCAGGGCTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESPGLRDVDDTRVLLPENRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...GTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGCCCTGGGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GGTGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: GATRSRAGPGIKLSALEARSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...TGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TCATTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: SFHSQATQSATSKRVSAKRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...CTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EGGEEEEAVAVQEEALALAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EKRKRPLLSRKRRLRFWCLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...GCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGGCAGAATGCCTTTGGTaGAAGGACAGGTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: EDEDLALGDQVPVVQATGAECLW*KDRCGE
Trigger: CTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGC...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACGCAGAATGCCTTTGGTaGAAGGACAGGTGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHAECLW*KDRCGE
Trigger: CTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGC...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp ACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACAGTGGGGTTGGCAGCATaGCCCCACCTCTGTCACAGT +
Preference number: 4 (lower is better)
Translates to: TNPRTRGTPHSCSRSLVTVGLAA*PHLCHS
Trigger: ACTGTGACAGAGGTGGGGTCATGCTGCCAACCCCAC...TGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR GCA 90 bp CTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: LGDQVPVVQATGCHQEQGRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCACCCAGCCCTCTCCTaGACGGCTACCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RTEPLICPKAAPKGCQQPHPALS*TATRRC
Trigger: ACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTG...GGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp ACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACACCCAGCCCTCTCCTaGACGGCTACCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: THTRHTPLMLSVSGYTPTHPALS*TATRRC
Trigger: ACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTG...TGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp ACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACATCCAGCCCCCAGGAATaGAGGCGCTCAAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TNPRTRGTPHSCSRSLVTSSPQE*RRSKPV
Trigger: CACAGGCTTTGAGCGCCTGCATTCCTGGGGGCTGGA...TGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTTCACAGAGCCATGCCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EEDEDLALGDQVPVVQATSQSHA*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGCATGGCTCTGTGA...AGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000636212.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALGDQVPVVQATGCHQEQIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAAGGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GRGACASGAGRGPAWRRRIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CCTTCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LALGDQVPVVQATGCHQETGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: CHQEQGRPWNQALSFRGSESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...ACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTCTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: QPSPARLPEDVREEQTSPLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...AGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GTGCTGGTAGCCACTGAAGAGCAGGCGGTGGTTGACAGAGTCACCCACCAGGTGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VLVATEEQAVVDRVTHQVEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAGTGGCTACCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR CCA 90 bp GTGGTGCTGGTAGCCACTGAAGAGCAGGCGGTGGTTGACAGAGTCACCCACCAGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VVLVATEEQAVVDRVTHQEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAGTGGCTACCAGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR CCA 90 bp GGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GRGRCCPGRGACASGAGRKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: RTEPLICPKAAPKGCQQPHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...GGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACCAGGGGCCCGGATCCTaGCCCAGAAACACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: RTRGTPHSCSRSLVTHPHQGPGS*PRNTLK
Trigger: TTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG...GTGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTCCAGCCTGGGCAGGGGTCTaGAGTGCACATAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRDVDDTRVLLPENRVIPAWAGV*SAHSPQ
Trigger: CTGGGGGCTATGTGCACTCCAGACCCCTGCCCAGGC...TGGAATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTGGTCACCTGCAAAGCTaGAATGCCAGGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSGHLQS*NARGVG
Trigger: GCCCACTCCCCTGGCATTCCAGCTTTGCAGGTGACC...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp ACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACAGTGCCGCAGTTCTTCTaGAGTGGGAGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: TNPRTRGTPHSCSRSLVTVPQFF*SGSRGT
Trigger: TGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCAC...TGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTCCAGGCGCTCAAAGCCTGTaGCTAGGCTGCCCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LRDVDDTRVLLPENRVIPGAQSL*LGCPKR
Trigger: GCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCC...TGGAATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CCA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTCAAGGCAAAGCCTCTaGGCCCAGCACCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: PHPALSCTATRRCPGRTDSRQSL*AQHLVK
Trigger: CTTTACAAGGTGCTGGGCCCAGAGGCTTTGCCTTGA...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GGACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCCCTCCCTTGAAACCCTaGGCCACTCTGTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GQSHSSVPKLHPRGVSNPPPLKP*ATLSRQ
Trigger: TTGCCTTGACAGAGTGGCCCAGGGTTTCAAGGGAGG...GGGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GTTCTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCGGAAAGAGAGACACCTaGCCTGACTTCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLQCEVEPEVEVEGSRAGGKRDT*PDFCRP
Trigger: AGGCCTGCAGAAGTCAGGCCAGGTGTCTCTCTTTCC...GCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS-3UTR TCA 90 bp CACACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: HTRIHAHEAHPTHALGLWQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: EDEDLALGDQVPVVQATGRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: HTNPRTRGTPHSCSRSLVRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...AACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp CAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGCAACCCCAACCTACTaGCCTACTTTGGGACCACAG +
Preference number: 4 (lower is better)
Translates to: QPSPARLPEDVREEQTSPATPTY*PTLGPQ
Trigger: CTGTGGTCCCAAAGTAGGTCAGTAGGTTGGGGTTGC...AGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp TTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: FHSQATQSATSKRVSAKERGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...CTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CATTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: HSTARRPRAPQARGSVRRRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...CCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GGTGAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTAGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GEDEEDEDLALGDQVPVVVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...TACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTCCATCACAGAGCCATGCCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LRDVDDTRVLLPENRVIPSQSHA*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGCATGGCTCTGTGA...TGGAATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000636212.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ARRPRAPQARGSVRRRRRIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...TCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VRRRRRGRGRCCPGRGACEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...GCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGDPERHKQEGQCEGGEETGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SAKEEKRKRPLLSRKRRLEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CEGGEEEEAVAVQEEALAKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAAGCAGTTCTTCTGGAGTaGGAGCAGGGGGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: TEPLICPKAAPKGCQQPQAVLLE*EQGDRA
Trigger: AGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGC...TTGGGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CAAAGCCTCTGGGCCCAGCACCTTGTAAAGGCTTTGATGAGAGGAGCTCTGGCTGTGCCGCAGTTCTTCTaGAGTGGGAGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: QSLWAQHLVKALMRGALAVPQFF*SGSRGT
Trigger: TGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCAC...AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTGCTGGGCCCAGAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGTCCTGGGCGCGGCTCTaGGGAGGGTCAGGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVESWARL*GGSGCA
Trigger: CGCGCACCCTGACCCTCCCCAGAGCCGCGCCCAGGA...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CCA 90 bp AGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGGGTTCAGAGTGGGGTTaGCAGCATGACCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RAGPGIKLSALEAVKQPLGSEWG*QHDPTS
Trigger: AGAGGTGGGGTCATGCTGCCAACCCCACTCTGAACC...CAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR TCA 90 bp AGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCACCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: RRGRGRCCPGRGACASGAPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...TGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: CHQEQGRPWNQALSFRGSPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...ACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: EGGEEEEAVAVQEEALALPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: EDEDLALGDQVPVVQATGQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp ACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAAAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: TEPLICPKAAPKGCQQPQRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...TTGGGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAAGCCCAGGGCTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: ESPGLRDVDDTRVLLPENRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...GTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGCCCTGGGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp ACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TRSRAGPGIKLSALEAVKAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...CTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp ATGTCCGGGAAGAACAGACTAGCCCTGAGTAGGGAGTGTGGTCAGGTGCAGAGGCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: MSGKNRLALSRECGQVQRLSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...CCTCTGCACCTGACCACACTCCCTACTCAGGGCTAGTCTGTTCTTCCCGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR TCA 90 bp CCAGCCCCCAGGAATGCAGGCGCTCAAAGCCTGTGGCTAGGCTGCCCGAAGCGCAATCCGATCCTGAGATaGTCCAAATCAAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: PAPRNAGAQSLWLGCPKRNPILR*SKSNRN
Trigger: GTTTCTGTTTGATTTGGATCATCTCAGGATCGGATT...GCGCTTCGGGCAGCCTAGCCACAGGCTTTGAGCGCCTGCATTCCTGGGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR TCA 90 bp GGCTGCCCGAAGCGCGTGCCGCAGTTCTTCTGGAGTGGGAGCAGGGGGACAGAGAATCCGATCCTGAGATaGTCCAAATCAAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GCPKRVPQFFWSGSRGTENPILR*SKSNRN
Trigger: GTTTCTGTTTGATTTGGATCATCTCAGGATCGGATT...CTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGCGGCACGCGCTTCGGGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp GGTGAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GEDEEDEDLALGDQVPVVRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...TACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTAGGAGCTCTGGCTTTTaGTCAGGGCCTTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: EEDEDLALGDQVPVVQATRSSGF*SGPLAP
Trigger: GGGTGCCAAAGGCCCTGAGCAAAAGCCAGAGCTCCT...AGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR GCA 90 bp TGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGTGGGGAGGGTCAGGGTaGGCGTCCCACCGCGTCGTG +
Preference number: 4 (lower is better)
Translates to: CTTCSDPGTHHNSRAAQRWGGSG*ASHRVV
Trigger: CACGACGCGGTGGGACGCGCACCCTGACCCTCCCCA...CCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR GCA 90 bp GAGGAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTATGGGGAGGGTCAGGGTaGGCGTCCCACCGCGTCGTG +
Preference number: 4 (lower is better)
Translates to: EEEGDVPHAVTQVLIIIVWGGSG*ASHRVV
Trigger: CACGACGCGGTGGGACGCGCACCCTGACCCTCCCCA...TACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CCA 90 bp GAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGTCACAGAGCCATGCCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EDEEDEDLALGDQVPVVQSQSHA*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGCATGGCTCTGTGA...CTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000636212.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EDLALGDQVPVVQATGCHIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...GTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGGAATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RRPRAPQARGSVRRRRRGIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...TCCTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EDLALGDQVPVVQATGCHTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...GTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CEGGEEEEAVAVQEEALATGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RAGPGIKLSALEAVKQPLEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EDEDLALGDQVPVVQATGKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTCCAAGCTGGGGTTCAGAGTaGGGTTGGCAGCATGACCCC +
Preference number: 4 (lower is better)
Translates to: LRDVDDTRVLLPENRVIPSWGSE*GWQHDP
Trigger: GGGGTCATGCTGCCAACCCCACTCTGAACCCCAGCT...TGGAATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR CCA 90 bp GAGATTCTTGATGATGGGGTTCTCACGGACAGACAGGTGGTGCTGGTAGCCACTAGAGGGAATACCAGCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: EILDDGVLTDRQVVLVATRGNTS*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGCTGGTATTCCCTCT...AGTGGCTACCAGCACCACCTGTCTGTCCGTGAGAACCCCATCATCAAGAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637450.1
CDS-3UTR TCA 90 bp GAAAGCCCAGGGCTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: ESPGLRDVDDTRVLLPENQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...GTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGCCCTGGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GGGCTCAGGGACGTAGATGACACCCGGGTACTTCTTCCTGAGAACAGGGTCATTAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: GLRDVDDTRVLLPENRVIRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...AATGACCCTGTTCTCAGGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCAACAGAATCCGATCCTaGGATGATCCAAATCAAACA +
Preference number: 4 (lower is better)
Translates to: AVQEEALALLVQDEGQHGNRIRS*DDPNQT
Trigger: TGTTTGATTTGGATCATCTCAGGATCGGATTCTGTT...GCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGGGTGGAAGGGAGCCGTaGGGGCAGCCTCATCAGCGC +
Preference number: 4 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVEGGREP*GQPHQR
Trigger: GCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCACC...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EGDVPHAVTQVLIIIVEQVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...CTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRAGPGIKLSALEAVKQPEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...CGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HTNPRTRGTPHSCSRSLVTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...AACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AACCTACTGACCTACTTTGGGACCACAGGCCCATCTAGTGCAAATGAGGCCCAGCTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: NLLTYFGTTGPSSANEAQLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...CTGGGCCTCATTTGCACTAGATGGGCCTGTGGTCCCAAAGTAGGTCAGTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGACCTCCCTTGAAACCCTaGGCCACTCTGTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: QGPGSWPRNTLKQNPILRPPLKP*ATLSRQ
Trigger: TTGCCTTGACAGAGTGGCCCAGGGTTTCAAGGGAGG...TCTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GATCTTGAGCAAGAGAAAGGGCGTGATGACGTTGTAGGCCATGTGGAAGTAGTCCACGCATCCCTTCCCTaGGCTTCTCCGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: DLEQEKGRDDVVGHVEVVHASLP*ASPAHL
Trigger: CAGGTGTGCCGGAGAAGCCCAGGGAAGGGATGCGTG...GACTACTTCCACATGGCCTACAACGTCATCACGCCCTTTCTCTTGCTCAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637223.1
CDS-3UTR TCA 90 bp GAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: EEDEDLALGDQVPVVQATQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...AGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp ACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTTGAGCAACCTGCGCCAGTGGCTTaGAGGCTCGGCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TQVLIIIVEQLKGVDLEQPAPVA*RLGSSP
Trigger: CGGGCTTGAGCCGAGCCTTCAAGCCACTGGCGCAGG...TTGCTCAAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637223.1
CDS-3UTR GCA 90 bp GCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: AGARILAQKHSKTESDPERGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...CTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RAGPGIKLSALEAVKQPLRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...CAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp ACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TTCSDPGTHHNSRAAQRSVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...ACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAGTACAGGCCACTGGGTaGCACCAGGAGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCTTCSDPGTHHNSRAAQVQATG*HQEQGR
Trigger: CCTGCCCTGCTCCTGGTGGCACCCAGTGGCCTGTAC...TTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GGTGAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTAGAGTCACCCACCAGGTaGATGCTGGCACCCATGATG +
Preference number: 4 (lower is better)
Translates to: GEDEEDEDLALGDQVPVVESPTR*MLAPMM
Trigger: CATCATGGGTGCCAGCATCCACCTGGTGGGTGACTC...TACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGCTGAAGAGCAGGCGGTaGTTGACAGAGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: EDEEDEDLALGDQVPVVQLKSRR*LTESPT
Trigger: GGTGGGTGACTCTGTCAACCACCGCCTGCTCTTCAG...CTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GCAGCTCAAAGGAGTCGATCTAGCAGAATGCCTTTGGTGAAAGGACAGGTGCGGGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AAQRSRSSRMPLVKGQVREQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGATCGACTCCTTTGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TCGAGAGGGAATACCAGCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SRGNTSMAMGRPKSRTQFKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...GAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CCA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGAGCGCCAGAGCCTaGTGCCAGGGACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVEQSARA*CQGLSA
Trigger: GGCACTGAGTCCCTGGCACCAGGCTCTGGCGCTCTG...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
3UTR CAA 72 bp TCAAAGGAGTCGATCAGCGTCTCCGGCTTGAGATTCTaGATGATGGGGTTCTCACGGACAGACAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SKESISVSGLRF*MMGFSRTDRWC
Trigger: GCACCACCTGTCTGTCCGTGAGAACCCCATCATCAAGAATCTCAAGCCGGAGACGCTGATCGACTCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR TCA 90 bp GATGCTGGCACCCATGATGAAGATGATGATGCTCACGTACGTGATGGAGCGTGGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: DAGTHDEDDDAHVRDGAWQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CCACGCTCCATCACGTACGTGAGCATCATCATCTTCATCATGGGTGCCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637329.1
CDS-3UTR TCA 90 bp CCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGAGAATCCGATCCTGAGATaGTCCAAATCAAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: PGDPERHKQEGQCEGGEENPILR*SKSNRN
Trigger: GTTTCTGTTTGATTTGGATCATCTCAGGATCGGATT...CTCTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AGAGGGAATACCAGCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RGNTSMAMGRPKSRTQFCRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR GCA 90 bp AGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGCAGCCGCTGAAGTAACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RPWNQALSFRGSKAAAEVTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...TACTTCAGCGGCTGCTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTAGCCCTGAGTCCCAGAAAGGAGAAATaGTTTGCTCAACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PLLHGYQKMSGKNRLALSPRKEK*FAQQPQ
Trigger: CTGTGGCTGTTGAGCAAAGCATTTCTCCTTTCTGGG...ACTCAGGGCTAGTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR GCA 90 bp GTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGACCTGCAAAGCTGGAATaGCAGGGGAGTGGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VPHAVTQVLIIIVEQLKGPAKLE*QGSGRC
Trigger: GCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG...TCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGAGGGAATACCAGCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EREYQHGNGTPKVQNPVLTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CCA 90 bp GAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGCAGGGGCCCGGATCCTaGCCCAGAAACACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: EDEEDEDLALGDQVPVVQQGPGS*PRNTLK
Trigger: TTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTG...CTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTTGGCGCCTGCGCCAGTaGCTTGAAGGCTCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: CSDPGTHHNSRAAQRSRSWRLRQ*LEGSAQ
Trigger: TTGAGCCGAGCCTTCAAGCCACTGGCGCAGGCGCCA...AGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637223.1
CDS-3UTR TCA 90 bp GGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAGATCTGGCCCTCGGTaGCCAGGTACCAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: GDVPHAVTQVLIIIVEQLRSGPR*PGTSST
Trigger: TGTACTACTGGTACCTGGTCACCGAGGGCCAGATCT...GAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTAGCAGAATGCCTTTGGCGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LIIIVEQLKGVDLAECLWRLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...CCAAAGGCATTCTGCTAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CSDPGTHHNSRAAQRSRSPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...AGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 4 (lower is better)
Translates to: STHTRHTPLMLSVSGYTPENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...GGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GGTGAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTAGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GEDEEDEDLALGDQVPVVEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...TACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACAGGCGCTTGCGCTTCTaGTGCAGGACGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRNLTEIVESENDALCAHRRLRF*CRTRAS
Trigger: GCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCT...GTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGAGGTCACCTGCAAAGCTaGAATGCCAGGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TCSDPGTHHNSRAAQRSRGHLQS*NARGVG
Trigger: GCCCACTCCCCTGGCATTCCAGCTTTGCAGGTGACC...TCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCAACAGAATCCGATCCTaGGATGATCCAAATCAAACA +
Preference number: 4 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTNRIRS*DDPNQT
Trigger: TGTTTGATTTGGATCATCTCAGGATCGGATTCTGTT...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAAGCAGGTGGTGGGCAGGTaGCACACCAGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTEIVESENDALCAHIYKQVVGR*HTRSPP
Trigger: AGGAGGGGACCTGGTGTGTCACCTGCCCACCACCTG...CTTGTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR GCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAGCGCCAGAGCCTGGTaGCAGGGACTCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYSARAW*QGLSAD
Trigger: GTCGGCACTGAGTCCCTGGCACCAGGCTCTGGCGCT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 4 (lower is better)
Translates to: DEDLALGDQVPVVQATGCENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...GCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACACTGGGCTTGTTGAGTGGAAACCACTCGAGAGGGAATACCAGCATGGCAATGACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLGLLSGNHSRGNTSMAMTGLVE*KPLERE
Trigger: TTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGT...CATTGCCATGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CCA 90 bp ACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: TTCSDPGTHHNSRAAQRSHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...ACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTGCAGTTCTTCTGGAGTaGGAGCAGGGGGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: CSDPGTHHNSRAAQRSRSAVLLE*EQGDRA
Trigger: AGCTCTGTCCCCCTGCTCCCACTCCAGAAGAACTGC...AGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAG +
Preference number: 4 (lower is better)
Translates to: EGDVPHAVTQVLIIIVEQQHWAC*VETTRE
Trigger: CTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTG...CTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCTCAGTGCCGACTGCTaGCGTGAAGGGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVELSADC*REGCRK
Trigger: CTTTCTACACCCTTCACGTCAGCAGTCGGCACTGAG...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACGCTTGCGCTTCTGGTaGAGGACGAGGGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SNRNLTEIVESENDALCARLRFW*RTRASM
Trigger: CATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCG...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: NRNLTEIVESENDALCAHPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp CCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAACCTACTGACCTACTTTGGGGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 4 (lower is better)
Translates to: PKLHPRGVSNPNLLTYFGENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...CCCAAAGTAGGTCAGTAGGTTGGGGTTGCTGACACCCCTTGGGTGCAGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACTCACAGAGCCATGCCTaGCCTGCAGGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYSQSHA*PAGRRR
Trigger: GCGCCTCCTTCCTGCAGGCCAGGCATGGCTCTGTGA...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EGDVPHAVTQVLIIIVEQEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...CTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCAGAGCAGGGCAGGCCCTaGAATCAAGCTCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CSDPGTHHNSRAAQRSRSEQGRP*NQALSF
Trigger: AAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTC...TGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR TCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAGAGCAGGCGGTGGTTaGCAGAGTCACCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYRAGGG*QSHPPG
Trigger: ACCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACCCAGGAAGAGGCGCTTaGGCTTCTGGTGCAGGACGA +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYPGRGA*ASGAGR
Trigger: TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACAGGAGCTCTGGCTTTTaGTCAGGGCCTTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: NRNLTEIVESENDALCAHRSSGF*SGPLAP
Trigger: GGGTGCCAAAGGCCCTGAGCAAAAGCCAGAGCTCCT...GTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGGAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EEEGDVPHAVTQVLIIIVEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...TACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RRGCTTCSDPGTHHNSRAEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...TGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp ACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTGAGGGAATACCAGCATaGCAATGGGACGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TTCSDPGTHHNSRAAQRSEGIPA*QWDAQS
Trigger: ACTTTGGGCGTCCCATTGCCATGCTGGTATTCCCTC...ACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp GAGGAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EEEGDVPHAVTQVLIIIVKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...TACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp CATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HAVTQVLIIIVEQLKGVDKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...ATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCAGCTCAGGGACGTAGATaGCACCCGGGTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SNRNLTEIVESENDALCAAQGRR*HPGTSS
Trigger: GGAAGAAGTACCCGGGTGTCATCTACGTCCCTGAGC...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TCACCCACCAGGTGGATGCTGGCACCCATGATGAAGATGATGATGCTCACGTACAACAGAATCCGATCCTaGGATGATCCAAATCAAACA +
Preference number: 4 (lower is better)
Translates to: SPTRWMLAPMMKMMMLTYNRIRS*DDPNQT
Trigger: TGTTTGATTTGGATCATCTCAGGATCGGATTCTGTT...GTACGTGAGCATCATCATCTTCATCATGGGTGCCAGCATCCACCTGGTGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR GCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACCCAGCCCTCTCCTaGACGGCTACCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: SNRNLTEIVESENDALCAHPALS*TATRRC
Trigger: ACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTG...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR CCA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVEIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATACATGCTCTCGGTCTCTaGTTACACACCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: RNLTEIVESENDALCAHIHALGL*LHTHTP
Trigger: GGGGGTGTGGGTGTGTAACCAGAGACCGAGAGCATG...TATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp AACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACCCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: NRNLTEIVESENDALCAHPSSAV*SRTRGR
Trigger: TCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG...GTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACACTCCTGTATTCAGATaGCCTCCATGGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYTPVFR*PPWPTL
Trigger: GAGGGTGGGCCATGGAGGGCATCTGAATACAGGAGT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp GTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGACCCAGAAAGGAGAAATaGTTTGCTCAACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VPHAVTQVLIIIVEQLKGPRKEK*FAQQPQ
Trigger: CTGTGGCTGTTGAGCAAAGCATTTCTCCTTTCTGGG...TCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR GCA 90 bp TTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAAGCATCTGTCCCAAAGCTaGACCCAAGGGGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTEIVESENDALCAHIYKHLSQS*TQGVSA
Trigger: TGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATG...CTTGTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CCA 90 bp CCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTAGCAGAATGATACCAGCATGGCAATaGGACGCCCAAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGTHHNSRAAQRSRSSRMIPAWQ*DAQSPE
Trigger: TTCTGGACTTTGGGCGTCCCATTGCCATGCTGGTAT...CATTCTGCTAGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CCA 90 bp TTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAAGAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LTEIVESENDALCAHIYKKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...CTTGTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CCA 90 bp AGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATAAAGAGGATGAAGATCTaGCCCTCGGTGACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RNLTEIVESENDALCAHIKRMKI*PSVTRY
Trigger: GTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTT...TATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAGGGGATGTACCACATaGAGTGACCCAGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYRGCTT*SDPGTH
Trigger: ATGAGTACCTGGGTCACTGCATGTGGTACATCCCCT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp TGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 4 (lower is better)
Translates to: CTTCSDPGTHHNSRAAQRENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...CCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCAAATCCGATCCTGAGATaGTCCAAATCAAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: SNRNLTEIVESENDALCANPILR*SKSNRN
Trigger: GTTTCTGTTTGATTTGGATCATCTCAGGATCGGATT...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR TCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACAACAGAATCCGATCCTaGGATGATCCAAATCAAACA +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYNRIRS*DDPNQT
Trigger: TGTTTGATTTGGATCATCTCAGGATCGGATTCTGTT...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS-3UTR GCA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACGAAAATGATGCACTCTaGGCACACATATACAAGACA +
Preference number: 4 (lower is better)
Translates to: NLTEIVESENDALCAHIYENDAL*AHIYKT
Trigger: TGTCTTGTATATGTGTGCGCAGAGTGCATCATTTTC...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000637329.1
ENST00000638076.1
CDS CCA 90 bp AGAGCCATGCCTGGCCTGCAGGAAGGAGGCGCCCAGCTGCGCGCCTaGGCCGCCCGTCGCTCCCAGGTGCTGCCGCCTCCGCGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: RAMPGLQEGGAQLRA*AARRSQVLPPPRRL
Trigger: GAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGACGGGCGGCCCAGGCGCGCAGCTGGGCGCCTCCTTCCTGCAGGCCAGGCATGGCTCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000566347.5
ENST00000567060.5
ENST00000636020.1
ENST00000636212.1
ENST00000637494.1
ENST00000637667.1
ENST00000638076.1
CDS CCA 90 bp GGGGATGTACCTGGCCTGCAGGAAGGAGGCGCCCAGCTGCGCGCCTaGGCCGCCCGTCGCTCCCAGGTGCTGCCGCCTCCGCGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: GDVPGLQEGGAQLRA*AARRSQVLPPPRRL
Trigger: GAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGACGGGCGGCCCAGGCGCGCAGCTGGGCGCCTCCTTCCTGCAGGCCAGGTACATCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565471.6
CDS GCA 90 bp GCCCGTCGCTCCCAGGTGCTGCCGCCTCCGCGTCGCCTCCATGGCTaGCCCGCAGGCCCCTCGGCCCTGCCTTTCCGAGGAAGAGACCGG +
Preference number: 5 (lower is better)
Translates to: ARRSQVLPPPRRLHG*PAGPSALPFRGRDR
Trigger: CCGGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGACGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000565471.6
ENST00000566347.5
ENST00000567060.5
ENST00000636020.1
ENST00000636212.1
ENST00000636314.1
ENST00000637450.1
ENST00000637494.1
ENST00000637667.1
ENST00000638076.1
CDS CCA 90 bp GGAATACCAGCTGGCCTGCAGGAAGGAGGCGCCCAGCTGCGCGCCTaGGCCGCCCGTCGCTCCCAGGTGCTGCCGCCTCCGCGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: GIPAGLQEGGAQLRA*AARRSQVLPPPRRL
Trigger: GAGGCGACGCGGAGGCGGCAGCACCTGGGAGCGACGGGCGGCCCAGGCGCGCAGCTGGGCGCCTCCTTCCTGCAGGCCAGCTGGTATTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636314.1
ENST00000637450.1
CDS GCA 90 bp CCCCTCGGCCCTGCCTTTCCGAGGAAGAGACCGGTTCAGCTCGGCTaGCCCGGCGGAGGCCGCCGCAAATTCCCAGCGCGGGGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: PLGPAFPRKRPVQLG*PGGGRRKFPARGGS
Trigger: CGAACCGCCCCGCGCTGGGAATTTGCGGCGGCCTCCGCCGGGGCAGCCGAGCTGAACCGGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000566347.5
ENST00000636020.1
ENST00000636212.1
ENST00000636314.1
ENST00000637667.1
ENST00000638076.1
CDS GCA 90 bp TCCGCCCAGGCAAGGTCCTGGGCGCGGCTCTGGGGAGGGTCAGGGTaGGCGTCCCACCGCGTCGTGGGGCAGGGTGTAGTGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: SAQARSWARLWGGSG*ASHRVVGQGVVMVT
Trigger: CGTGACCATCACTACACCCTGCCCCACGACGCGGTGGGACGCGCACCCTGACCCTCCCCAGAGCCGCGCCCAGGACCTTGCCTGGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS GCA 90 bp TTGGGCCGCGGGCCCAAGGGAAAGAGAGACACCTGGCCTGACTTCTaGAGGCCTCTCCCCGCCAGCGAGCGCACGGCAGCGGTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGRGPKGKRDTWPDF*RPLPASERTAAVPR
Trigger: CCTGGGCACCGCTGCCGTGCGCTCGCTGGCGGGGAGAGGCCTGCAGAAGTCAGGCCAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564846.1
CDS GCA 90 bp AGCGCGACTGACGCAGAGGTCGCAATACCGCTGGGGGCTGCCTGGTaGCATGCGGTTGGGCCGCGGGCCCAAGGGAAAGAGAGACACCTG +
Preference number: 5 (lower is better)
Translates to: SATDAEVAIPLGAAW*HAVGPRAQGKERHL
Trigger: CAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CCA 90 bp CTGAGCGCGACTGACGCAGAGGTCGCAATACCGCTGGGGGCTGCCTaGTGCCATGCGGTTGGGCCGCGGGCCCAAGGGAAAGAGAGACAC +
Preference number: 5 (lower is better)
Translates to: LSATDAEVAIPLGAA*CHAVGPRAQGKERH
Trigger: GTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS-3UTR CAA 90 bp CTGCAGTGTGAAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAGCCCTGGTGCCATGCGGTaGGGCCGCGGGCCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: LQCEVEPEVEVEGSRAGSPGAMR*GRGPKG
Trigger: TCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGG...GCTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS CCA 90 bp CGCAGAGGTCGCAATACCGCTGGGGGCTGCCTGGTGCCATGCGGTTaGGCCGCGGGCCCAAGGGAAAGAGAGACACCTGGCCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: RRGRNTAGGCLVPCG*AAGPRERETPGLTS
Trigger: AGAAGTCAGGCCAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS TCA 90 bp CCCTGGGCTTCTCCGGCACACCTGTATCTAGGGACTGAGCGCGACTaGCGCAGAGGTCGCAATACCGCTGGGGGCTGCCTGGTGCCATGC +
Preference number: 5 (lower is better)
Translates to: PWASPAHLYLGTERD*RRGRNTAGGCLVPC
Trigger: GCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCTCAGTCCCTAGATACAGGTGTGCCGGAGAAGCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CCA 90 bp GAGAGGGAATACCAGCTGCGGAGCAAATGGAAGAATGGGCTCACCTaGGCACAGCCCCACGCGGCCCTCGGGCCTCAAGGGAGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EREYQLRSKWKNGLT*AQPHAALGPQGSLP
Trigger: GGGCAGACTCCCTTGAGGCCCGAGGGCCGCGTGGGGCTGTGCCCAGGTGAGCCCATTCTTCCATTTGCTCCGCAGCTGGTATTCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS-3UTR CAA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCGACCGCTCGATGAGCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: PAKLECQGSGRCLQLLGADRSMS*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTC...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS TCA 90 bp CGCATCCCTTCCCTGGGCTTCTCCGGCACACCTGTATCTAGGGACTaGGCGCGACTGACGCAGAGGTCGCAATACCGCTGGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RIPSLGFSGTPVSRD*ARLTQRSQYRWGLP
Trigger: AGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCTCAGTCCCTAGATACAGGTGTGCCGGAGAAGCCCAGGGAAGGGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS-3UTR CAA 90 bp CTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: LGDQVPVVQATGCHQEQGSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...GCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: ALGDQVPVVQATGCHQEQSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: RCCPGRGACASGAGRGPASRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...TGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp TCATTCTTGAATCCCGCGTCCCCGTGGCTGGGGGCTGACACATCCCTGGGCACCAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: SFLNPASPWLGADTSLGTKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...GGTGCCCAGGGATGTGTCAGCCCCCAGCCACGGGGACGCGGGATTCAAGAATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249806.11
CDS-3UTR CAA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: PHPALSCTATRRCPGRTDSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000638076.1
CDS-3UTR CAA 90 bp AGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGAGGAGAAGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: SQATQSATSKRVSAKEEKSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CTTCTCCTCCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGCAGGGCGACCGCTCGATGAGCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: LGDQVPVVQATGCHQEQGDRSMS*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTC...GCCCTGCTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGAGACCGCTCGATGAGCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: PGRGACASGAGRGPAWRRDRSMS*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTC...TCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: DLALGDQVPVVQATGCHQKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...CTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CAA 90 bp AAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: KRKRPLLSRKRRLRFWCRSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CACACACGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTTTGCTCAGGGCCTTaGGCACCCCACCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: HTRIHAHEAHPTHALGLWFCSGP*APHPPA
Trigger: GGCTGGAGGGTGGGGTGCCAAAGGCCCTGAGCAAAA...CCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp CCTGCAAAGCTGGAATGCCAGGGGAGTGGGCGGTGCCTCCAGCTCCTGGGGGCCGTATTTACTTCATTCTaGAATCCCGCGTCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PAKLECQGSGRCLQLLGAVFTSF*NPASPW
Trigger: CCACGGGGACGCGGGATTCAAGAATGAAGTAAATAC...GGCCCCCAGGAGCTGGAGGCACCGCCCACTCCCCTGGCATTCCAGCTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249806.11
CDS CCA 90 bp CTGGGGTGGGATGGACGCTTCCAGCTGGAATGTCACTCCAAAAAGTaGCTGGTCCCTTTAGCAGGCCAGCCCAGCCTCCAGATCCTCCCG +
Preference number: 5 (lower is better)
Translates to: LGWDGRFQLECHSKK*LVPLAGQPSLQILP
Trigger: CGGGAGGATCTGGAGGCTGGGCTGGCCTGCTAAAGGGACCAGCCACTTTTTGGAGTGACATTCCAGCTGGAAGCGTCCATCCCACCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS-3UTR CAA 90 bp CTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGTGCCACCAGGAGTCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: LALGDQVPVVQATGCHQESPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...CTCCTGGTGGCACCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGCATGGCGAAGATCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: PGRGACASGAGRGPAWRRSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...TCTTCGCCATGCTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VRRRRRGRGRCCPGRGACKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...GCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249806.11
ENST00000565471.6
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAGTCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: AVAVQEEALALLVQDEGQSSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...CTGGCCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS TCA 90 bp CCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: PWQWDAQSPEPSSAV*SRTRGRGGREPCGQ
Trigger: CTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS-3UTR CAA 90 bp AGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGAGGGCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 5 (lower is better)
Translates to: RGRCCPGRGACASGAGRGPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...CCCTCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGATCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: GRGRCCPGRGACASGAGRSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...TCGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp ATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: IHAHEAHPTHALGLWLHTKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...GGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CAA 90 bp AGGACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAGGGGGACAGAGCTTaGGGTAGAGGAGGGTCACCT +
Preference number: 5 (lower is better)
Translates to: RTEPLICPKAAPKGCQQPQGDRA*GRGGSP
Trigger: AGGTGACCCTCCTCTACCCAAAGCTCTGTCCCCCTG...GGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACGAGGTTCCTCCTCCCTaGAAACCCTGGGCCACTCTG +
Preference number: 5 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHEVPPP*KPWATL
Trigger: CAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCTC...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS TCA 90 bp TCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTaGAGTAGAACCAGAGGTCGAGGTGGAAGGGAGCCGTGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SWQWDAQSPEPSSAV*SRTRGRGGREPCGQ
Trigger: CTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637494.1
CDS TCA 90 bp TGGACCGTTCGGGTTCTGGCGCTCCTGAGTGCCAGATCAGTCTCCTaGGTGCTAGGCCCTGATGTGGAGGGACTGCTTCCAAACCAGGTT +
Preference number: 5 (lower is better)
Translates to: WTVRVLALLSARSVS*VLGPDVEGLLPNQV
Trigger: AACCTGGTTTGGAAGCAGTCCCTCCACATCAGGGCCTAGCACTCAGGAGACTGATCTGGCACTCAGGAGCGCCAGAACCCGAACGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS-3UTR CAA 90 bp GTCAGTGCGAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: VSAKEEKRKRPLLSRKRRSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...GCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTCGCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp TGCCACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTGACCGCTCGATGAGCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: CHQEQGRPWNQALSFRGSDRSMS*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTC...ACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637450.1
ENST00000638076.1
CDS GCA 90 bp ACACTGGGCTTGTTGAGTGGAAACCACTCGAGAGGGAATACCAGCTaGGGAGCAAATGGAAGAATGGGCTCACCTGGGCACAGCCCCACG +
Preference number: 5 (lower is better)
Translates to: TLGLLSGNHSRGNTS*GANGRMGSPGHSPT
Trigger: CGTGGGGCTGTGCCCAGGTGAGCCCATTCTTCCATTTGCTCCGCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 90 bp GTTTCCCCATCTATAACACAAGAGAGGTGGCCCAGAGGGCCTACTTaGACCGTTCGGGTTCTGGCGCTCCTGAGTGCCAGATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: VSPSITQERWPRGPT*TVRVLALLSARSVS
Trigger: GGAGACTGATCTGGCACTCAGGAGCGCCAGAACCCGAACGGTCCAAGTAGGCCCTCTGGGCCACCTCTCTTGTGTTATAGATGGGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS-3UTR CAA 90 bp GATGCTGGCACCCATGATGAAGATGATGATGCTCACGTACGTGATGGAGCGTGGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: DAGTHDEDDDAHVRDGAWSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CCACGCTCCATCACGTACGTGAGCATCATCATCTTCATCATGGGTGCCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637329.1
CDS-3UTR CAA 90 bp AGCAGCTCAAAGGAGTCGATCAGCGTCTCCGGCTTGAGATTCTTGATGATGGGGTCCAGGAAGAGGCGCTaGCGCTTCTGGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: SSSKESISVSGLRFLMMGSRKRR*RFWCRT
Trigger: CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGA...CCCCATCATCAAGAATCTCAAGCCGGAGACGCTGATCGACTCCTTTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR CAA 90 bp CCCCACCCAGCCCTCTCCTGCACGGCTACCAGAAGATGTCCGGGAAGAACAGACCACCTTGTAAAGGCTTaGATGAGAGGAGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PHPALSCTATRRCPGRTDHLVKA*MRGALA
Trigger: AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTG...GTCTGTTCTTCCCGGACATCTTCTGGTAGCCGTGCAGGAGAGGGCTGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp ACCAGGAGCAGGGCAGGCCCTGGAATCAAGCTCTCAGCTTTAGAGGCAGTAAAGGAGGTTCCTCCTCCCTaGAAACCCTGGGCCACTCTG +
Preference number: 5 (lower is better)
Translates to: TRSRAGPGIKLSALEAVKEVPPP*KPWATL
Trigger: CAGAGTGGCCCAGGGTTTCAAGGGAGGAGGAACCTC...CTTTACTGCCTCTAAAGCTGAGAGCTTGATTCCAGGGCCTGCCCTGCTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CAA 90 bp GAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCTCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: EKRKRPLLSRKRRLRFWCSSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...GCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCATCTAAGACCTAGGCCGGGTAACGAGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: AGSLISAHRAMHLRPRPGNEVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTT...ACCCGGCCTAGGTCTTAGATGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS TCA 90 bp TCCCTGGGTGGCTGGCCCAGCCTGCTGAAGGCACCTTCTGATTTCTaGGTGGTCCCAGCAAACATGAAGAAAATGTCAGGGATGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SLGGWPSLLKAPSDF*VVPANMKKMSGMGA
Trigger: TGCCCCCATCCCTGACATTTTCTTCATGTTTGCTGGGACCACTCAGAAATCAGAAGGTGCCTTCAGCAGGCTGGGCCAGCCACCCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS TCA 90 bp GAGCAAAAAGACCAGAGGGCCCAACTCCTTTCCCAAAGTCACACATaGGCTGTAGGCTGGAGGGGACAGCCCAGCCTTCAGTGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: EQKDQRAQLLSQSHT*AVGWRGQPSLQCRS
Trigger: ACTCCTGCACTGAAGGCTGGGCTGTCCCCTCCAGCCTACAGCTCATGTGTGACTTTGGGAAAGGAGTTGGGCCCTCTGGTCTTTTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS GCA 90 bp CTTCCCAGTGGGTCCTTGACCTCTCCCTGGACCTCCAGTCACTTCTaGCTCAGCCTCCCCAAATGTTTTACGGTTTCCCAAGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: LPSGSLTSPWTSSHF*LSLPKCFTVSQAQP
Trigger: AGGCTGTGCTTGGGAAACCGTAAAACATTTGGGGAGGCTGAGGCAGAAGTGACTGGAGGTCCAGGGAGAGGTCAAGGACCCACTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564846.1
ENST00000636020.1
CDS CCA 90 bp CACCTGGCTTCTTCCTCTCTTCCCAGTGGGTCCTTGACCTCTCCCTaGACCTCCAGTCACTTCTGCCTCAGCCTCCCCAAATGTTTTACG +
Preference number: 5 (lower is better)
Translates to: HLASSSLPSGSLTSP*TSSHFCLSLPKCFT
Trigger: CGTAAAACATTTGGGGAGGCTGAGGCAGAAGTGACTGGAGGTCCAGGGAGAGGTCAAGGACCCACTGGGAAGAGAGGAAGAAGCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564846.1
ENST00000636020.1
CDS-3UTR CAA 90 bp CGAATCCACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 5 (lower is better)
Translates to: RIHAHEAHPTHALGLWLHPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...GTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGTGGATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249806.11
ENST00000567060.5
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTGGGCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 5 (lower is better)
Translates to: EDEDLALGDQVPVVQATGPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...CCCAGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GAAGGAGGAGAAGAGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 5 (lower is better)
Translates to: EGGEEEEAVAVQEEALALPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...AAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCTCTTCTCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp ACAGAGCCACTCATCTGTCCCAAAGCTGCACCCAAGGGGTGTCAGCAACCCCAATCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: TEPLICPKAAPKGCQQPQSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...TTGGGGTTGCTGACACCCCTTGGGTGCAGCTTTGGGACAGATGAGTGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp GCAGGGGCCCGGATCCTGGCCCAGAAACACTCTAAAACAGAATCCGATCCTGAGTCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: AGARILAQKHSKTESDPESPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...CTCAGGATCGGATTCTGTTTTAGAGTGTTTCTGGGCCAGGATCCGGGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249806.11
ENST00000637329.1
ENST00000638076.1
CDS-3UTR CAA 90 bp CAGCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTGAAGTAAAGAGCAGGCGGTGGTaGACAGAGTCACCCACCAGG +
Preference number: 5 (lower is better)
Translates to: QHGNGTPKVQNPVLQCEVKSRRW*TESPTR
Trigger: CCTGGTGGGTGACTCTGTCAACCACCGCCTGCTCTT...TACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS TCA 90 bp TTTTACGGTTTCCCAAGCACAGCCTTGTCTTTAGGTCCTTCTACCTaGACACCTCTCTGCTTCCCCCACTGGCACGCCAGGCTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: FYGFPSTALSLGPST*TPLCFPHWHARLRL
Trigger: GAGCCTCAGCCTGGCGTGCCAGTGGGGGAAGCAGAGAGGTGTTCAGGTAGAAGGACCTAAAGACAAGGCTGTGCTTGGGAAACCGTAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564846.1
ENST00000636020.1
CDS TCA 90 bp CCTTCTCGGCAGCCTTGGGACAAAGGTTTATCCAGACAGGAAAGCTaGGTCCCAGAGGAGGTAACGGACTTGTCCCCAGACACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: PSRQPWDKGLSRQES*VPEEVTDLSPDTEQ
Trigger: CTGCTCTGTGTCTGGGGACAAGTCCGTTACCTCCTCTGGGACTCAGCTTTCCTGTCTGGATAAACCTTTGTCCCAAGGCTGCCGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 90 bp GTTGTAGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAATACCAGCTGGCCTGCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VVGHVEVVPNTGLVE*KPLEREYQLACRKE
Trigger: CTCCTTCCTGCAGGCCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636314.1
ENST00000637450.1
CDS-3UTR CAA 90 bp CAGCATGGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTGTGAAGTAGACCGCTCGATGAGCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: QHGNGTPKVQNPVLQCEVDRSMS*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGCTCATCGAGCGGTC...TACTTCACACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CAA 90 bp ACGCACACGAGGCACACCCCACTCATGCTCTCGGTCTCTGGTTACACACCCACACACCTTGTAAAGGCTTaGATGAGAGGAGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: THTRHTPLMLSVSGYTPTHLVKA*MRGALA
Trigger: AGCCAGAGCTCCTCTCATCAAAGCCTTTACAAGGTG...TGTGGGTGTGTAACCAGAGACCGAGAGCATGAGTGGGGTGTGCCTCGTGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp CATTCCACAGCCAGGCGACCCAGAGCGCCACAAGCAAGAGGGTCAGTGCGAAGGGCCATGCCTTTGAATTaGAGTTTTCTCAGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: HSTARRPRAPQARGSVRRAMPLN*SFLSEV
Trigger: GACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGC...CCTTCGCACTGACCCTCTTGCTTGTGGCGCTCTGGGTCGCCTGGCTGTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS-3UTR CAA 90 bp AGGAAGAGGCCGTTGCTGTCCAGGAAGAGGCGCTTGCGCTTCTGGTGCAGGACGCACAGAGCCATGCCTTaGAATTTGAGTTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RKRPLLSRKRRLRFWCRTHRAMP*NLSFLS
Trigger: GCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTG...CGTCCTGCACCAGAAGCGCAAGCGCCTCTTCCTGGACAGCAACGGCCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635747.1
CDS TCA 90 bp TCTGGCGCTCCTGAGTGCCAGATCAGTCTCCTGAGTGCTAGGCCCTaGTGTGGAGGGACTGCTTCCAAACCAGGTTCAAAGTACACGTTA +
Preference number: 5 (lower is better)
Translates to: SGAPECQISLLSARP*CGGTASKPGSKYTL
Trigger: TAACGTGTACTTTGAACCTGGTTTGGAAGCAGTCCCTCCACATCAGGGCCTAGCACTCAGGAGACTGATCTGGCACTCAGGAGCGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS-3UTR CAA 90 bp GAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGCCACTCCAACACTGGGCTTGTaGAGTGGAAACCACTCGAGA +
Preference number: 5 (lower is better)
Translates to: EEDEDLALGDQVPVVQATPTLGL*SGNHSR
Trigger: TCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGG...AGTGGCCTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000564752.1
ENST00000567060.5
ENST00000635747.1
ENST00000636212.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GTTGAGTGGAAACCACTCGAGAGGGAATACCAGCATGGCAATGGGACGCCCAAATCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: VEWKPLEREYQHGNGTPKSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...TTTGGGCGTCCCATTGCCATGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CAA 90 bp GAAGATGAAGAGGATGAAGATCTGGCCCTCGGTGACCAGGTACCAGTAGTACAGGGTGCTGGTAGCCACTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: EDEEDEDLALGDQVPVVQGAGSH*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGTGGCTACCAGCACC...CTGTACTACTGGTACCTGGTCACCGAGGGCCAGATCTTCATCCTCTTCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636212.1
CDS CCA 90 bp GTTGTAGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTGAGTaGAAACCACTCGAGAGGGAATACCAGCTGCGGAGCAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: VVGHVEVVPNTGLVE*KPLEREYQLRSKWK
Trigger: CTTCCATTTGCTCCGCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 90 bp GTGCGGTGCTCCACTTCCTTTCCTATACCCCTTTGTCTGTCTTGGTaGTTTGGTTCAACCTGGTTCACCTGCTTCCAGACACAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: VRCSTSFPIPLCLSW*FGSTWFTCFQTQAR
Trigger: TCTGGCCTGTGTCTGGAAGCAGGTGAACCAGGTTGAACCAAATCACCAAGACAGACAAAGGGGTATAGGAAAGGAAGTGGAGCACCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS GCA 90 bp TGGAAGGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATaGTTTTTACCTTTGAATTTGAGTTTTCTCAGCGAAGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: WKGAVRAASSALTEP*FLPLNLSFLSEVSQ
Trigger: CTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGTAAAAAGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538696.5
CDS-3UTR CAA 90 bp CAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCAGCGTCTCCGGTCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: QVLIIIVEQLKGVDQRLRSPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...CCGGAGACGCTGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635747.1
ENST00000637329.1
ENST00000637450.1
CDS-3UTR CAA 90 bp ACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGACAGGGGGACAGAGCTTaGGGTAGAGGAGGGTCACCT +
Preference number: 5 (lower is better)
Translates to: TCSDPGTHHNSRAAQRSRQGDRA*GRGGSP
Trigger: AGGTGACCCTCCTCTACCCAAAGCTCTGTCCCCCTG...TCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CAA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGTCCCCAACACTGGGCTaGTTGAGTGGAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVESPTLG*LSGNHS
Trigger: CGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGA...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000635747.1
ENST00000636212.1
ENST00000637223.1
ENST00000637329.1
ENST00000637450.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp AACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCACACATATACTTTTGCTCAGGGCCTTaGGCACCCCACCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NLTEIVESENDALCAHIYFCSGP*APHPPA
Trigger: GGCTGGAGGGTGGGGTGCCAAAGGCCCTGAGCAAAA...GTATATGTGTGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS-3UTR CAA 90 bp AGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCAGCGCAGTATGTGACACCCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SDPGTHHNSRAAQRSRSAQYVTP*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGGGTGTCACATACTG...CGCTGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637329.1
CDS-3UTR CAA 90 bp GGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAATCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: GCTTCSDPGTHHNSRAAQSSRMP*VKGQVR
Trigger: CCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGA...TTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636212.1
ENST00000637823.1
ENST00000638076.1
CDS-3UTR CAA 90 bp GGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCGCCATGCCTTTGAATTaGAGTTTTCTCAGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: GDVPHAVTQVLIIIVEQLAMPLN*SFLSEV
Trigger: GACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGC...GAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CAA 90 bp GAAGAAGGGGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGTCAAAGGAGTCGATCTaGAGCAAGAGAAAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: EEGDVPHAVTQVLIIIVESKESI*SKRKGV
Trigger: CACGCCCTTTCTCTTGCTCAAGATCGACTCCTTTGA...CTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCCCCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637223.1
CDS-3UTR CAA 90 bp TGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAAAGGAGTCGATCTGAAAGGAGAAATGCTTaGCTCAACAGCCACAGTAGG +
Preference number: 5 (lower is better)
Translates to: CSDPGTHHNSRAAQRSRSERRNA*LNSHSR
Trigger: CCTACTGTGGCTGTTGAGCAAAGCATTTCTCCTTTC...AGATCGACTCCTTTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638076.1
CDS-3UTR CAA 90 bp GGATGTACCACATGCAGTGACCCAGGTACTCATCATAATAGTAGAGCAGCTCAACACAGAGCCATGCCTTaGAATTTGAGTTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GCTTCSDPGTHHNSRAAQHRAMP*NLSFLS
Trigger: GCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTG...TTGAGCTGCTCTACTATTATGATGAGTACCTGGGTCACTGCATGTGGTACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635747.1
ENST00000637223.1
CDS-3UTR CAA 90 bp TCAAACAGAAACTTGACGGAAATAGTAGAGTCTGAAAATGATGCACTCTGCGCAGAAAGGAGAAATGCTTaGCTCAACAGCCACAGTAGG +
Preference number: 5 (lower is better)
Translates to: SNRNLTEIVESENDALCAERRNA*LNSHSR
Trigger: CCTACTGTGGCTGTTGAGCAAAGCATTTCTCCTTTC...TGCGCAGAGTGCATCATTTTCAGACTCTACTATTTCCGTCAAGTTTCTGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249806.11
ENST00000638076.1
CDS CCA 90 bp GTGCTTCTGAAATGCCACTGTTTAACTGAAAACACACCGGAGTTCTaGGATTATACCCCTCCTACTTCTGGAGATTTGAAGTATCTTTCT +
Preference number: 5 (lower is better)
Translates to: VLLKCHCLTENTPEF*DYTPPTSGDLKYLS
Trigger: AGAAAGATACTTCAAATCTCCAGAAGTAGGAGGGGTATAATCCCAGAACTCCGGTGTGTTTTCAGTTAAACAGTGGCATTTCAGAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS GCA 90 bp CAGAATGCAGCAATCTCAGTCTCTCTCTCTCTCTCTTACTCAGTGTaGATGTGTTTATCTGCCTCTTTACCTACATCATATATATACTTG +
Preference number: 5 (lower is better)
Translates to: QNAAISVSLSLSYSV*MCLSASLPTSYIYL
Trigger: CAAGTATATATATGATGTAGGTAAAGAGGCAGATAAACACATGCACACTGAGTAAGAGAGAGAGAGAGAGACTGAGATTGCTGCATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 90 bp ACACACCGGAGTTCTGGGATTATACCCCTCCTACTTCTGGAGATTTaGAGTATCTTTCTTCAATACAAAATGATGGTGATAGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: THRSSGIIPLLLLEI*SIFLQYKMMVIVNG
Trigger: ACCATTTACTATCACCATCATTTTGTATTGAAGAAAGATACTTCAAATCTCCAGAAGTAGGAGGGGTATAATCCCAGAACTCCGGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS GCA 90 bp CTCAGTCTCTCTCTCTCTCTCTTACTCAGTGTGCATGTGTTTATCTaGCTCTTTACCTACATCATATATATACTTGCTAAAATACTCTGT +
Preference number: 5 (lower is better)
Translates to: LSLSLSLLLSVHVFI*LFTYIIYILAKILC
Trigger: ACAGAGTATTTTAGCAAGTATATATATGATGTAGGTAAAGAGGCAGATAAACACATGCACACTGAGTAAGAGAGAGAGAGAGAGACTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 90 bp ATACTTGCTAAAATACTCTGTGATAGCAAAACATCAGAAATAGGCTaGCTCTTCAATCAAACAGGACCAGTTGAATCCCTGATAGTACTT +
Preference number: 5 (lower is better)
Translates to: ILAKILCDSKTSEIG*LFNQTGPVESLIVL
Trigger: AAGTACTATCAGGGATTCAACTGGTCCTGTTTGATTGAAGAGTCAGCCTATTTCTGATGTTTTGCTATCACAGAGTATTTTAGCAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 72 bp CCTGGCCTGCAGGAAGGAGGCGCCCAGCTGCGCGCCTaGGCCGCCCGTCGCTCCCAGGTGCTGCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PGLQEGGAQLRA*AARRSQVLPPP
Trigger: CGGAGGCGGCAGCACCTGGGAGCGACGGGCGGCCCAGGCGCGCAGCTGGGCGCCTCCTTCCTGCAGGCCAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000565471.6
ENST00000566347.5
ENST00000567060.5
ENST00000636020.1
ENST00000636212.1
ENST00000637494.1
ENST00000637667.1
ENST00000638076.1
CDS CCA 72 bp GCTGGCCTGCAGGAAGGAGGCGCCCAGCTGCGCGCCTaGGCCGCCCGTCGCTCCCAGGTGCTGCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: AGLQEGGAQLRA*AARRSQVLPPP
Trigger: CGGAGGCGGCAGCACCTGGGAGCGACGGGCGGCCCAGGCGCGCAGCTGGGCGCCTCCTTCCTGCAGGCCAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636314.1
ENST00000637450.1
CDS GCA 72 bp TCCCAGGTGCTGCCGCCTCCGCGTCGCCTCCATGGCTaGCCCGCAGGCCCCTCGGCCCTGCCTTTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: SQVLPPPRRLHG*PAGPSALPFRG
Trigger: TCCTCGGAAAGGCAGGGCCGAGGGGCCTGCGGGGCAGCCATGGAGGCGACGCGGAGGCGGCAGCACCTGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000565471.6
ENST00000566347.5
ENST00000567060.5
ENST00000636020.1
ENST00000636212.1
ENST00000636314.1
ENST00000637450.1
ENST00000637494.1
ENST00000637667.1
ENST00000638076.1
CDS GCA 72 bp GCAAGGTCCTGGGCGCGGCTCTGGGGAGGGTCAGGGTaGGCGTCCCACCGCGTCGTGGGGCAGGGTGTAGTG +
Preference number: 6 (lower is better)
Translates to: ARSWARLWGGSG*ASHRVVGQGVV
Trigger: CACTACACCCTGCCCCACGACGCGGTGGGACGCGCACCCTGACCCTCCCCAGAGCCGCGCCCAGGACCTTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS CCA 72 bp GCCTCCCTCCCTCCTAGGGATGGCTCCCAGTGTCTCTaGCCGGGGCCTGCCTCTCGCTCGCCGCTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: ASLPPRDGSQCL*PGPASRSPLLP
Trigger: GGGAAGGAGCGGCGAGCGAGAGGCAGGCCCCGGCCAGAGACACTGGGAGCCATCCCTAGGAGGGAGGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS GCA 72 bp CCTGCCTTTCCGAGGAAGAGACCGGTTCAGCTCGGCTaGCCCGGCGGAGGCCGCCGCAAATTCCCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: PAFPRKRPVQLG*PGGGRRKFPAR
Trigger: CCGCGCTGGGAATTTGCGGCGGCCTCCGCCGGGGCAGCCGAGCTGAACCGGTCTCTTCCTCGGAAAGGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000566347.5
ENST00000636020.1
ENST00000636212.1
ENST00000636314.1
ENST00000637667.1
ENST00000638076.1
CDS GCA 72 bp GTCGCCTCCATGGCTGCCCCGCAGGCCCCTCGGCCCTaGCTTTCCGAGGAAGAGACCGGTTCAGCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: VASMAAPQAPRP*LSEEETGSARL
Trigger: CAGCCGAGCTGAACCGGTCTCTTCCTCGGAAAGGCAGGGCCGAGGGGCCTGCGGGGCAGCCATGGAGGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000249806.11
ENST00000564752.1
ENST00000565471.6
ENST00000566347.5
ENST00000567060.5
ENST00000636020.1
ENST00000636212.1
ENST00000636314.1
ENST00000637450.1
ENST00000637494.1
ENST00000637667.1
ENST00000638076.1
CDS GCA 72 bp GACGCAGAGGTCGCAATACCGCTGGGGGCTGCCTGGTaGCATGCGGTTGGGCCGCGGGCCCAAGGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: DAEVAIPLGAAW*HAVGPRAQGKE
Trigger: CTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CCA 72 bp CGCAATACCGCTGGGGGCTGCCTGGTGCCATGCGGTTaGGCCGCGGGCCCAAGGGAAAGAGAGACACCTGGC +
Preference number: 6 (lower is better)
Translates to: RNTAGGCLVPCG*AAGPRERETPG
Trigger: GCCAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CCA 72 bp ACTGACGCAGAGGTCGCAATACCGCTGGGGGCTGCCTaGTGCCATGCGGTTGGGCCGCGGGCCCAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: TDAEVAIPLGAA*CHAVGPRAQGK
Trigger: TTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CAA 72 bp TCGCAATACCGCTGGGGGCTGCCTGGTGCCATGCGGTaGGGCCGCGGGCCCAAGGGAAAGAGAGACACCTGG +
Preference number: 6 (lower is better)
Translates to: SQYRWGLPGAMR*GRGPKGKRDTW
Trigger: CCAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CAA 90 bp ACGCAGAGGTCGCAATACCGCTGGGGGCTGCCTGGTGCCATGCGGTaGGGCCGCGGGCCCAAGGGAAAGAGAGACACCTGGCCTGACTTC +
Preference number: 6 (lower is better)
Translates to: TQRSQYRWGLPGAMR*GRGPKGKRDTWPDF
Trigger: GAAGTCAGGCCAGGTGTCTCTCTTTCCCTTGGGCCCGCGGCCCAACCGCATGGCACCAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS CCA 72 bp CAGCGAAGTCTCACAGGACAATGGCGCCTGCGCCAGTaGCTTGAAGGCTCGGCTCAAGCCCGCCTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QRSLTGQWRLRQ*LEGSAQARLAS
Trigger: GGAGGCGAGGCGGGCTTGAGCCGAGCCTTCAAGCCACTGGCGCAGGCGCCATTGTCCTGTGAGACTTCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS CAA 72 bp GGGCAGGCGACAGTGCCCTCACCTAGCAGAATGCCTTaGGTGAAAGGACAGGTGCGGCGAGGGGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: GQATVPSPSRMP*VKGQVRRGVGA
Trigger: GGCCCCCACCCCTCGCCGCACCTGTCCTTTCACCAAAGGCATTCTGCTAGGTGAGGGCACTGTCGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636964.1
CDS TCA 72 bp TCTCCGGCACACCTGTATCTAGGGACTGAGCGCGACTaGCGCAGAGGTCGCAATACCGCTGGGGGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SPAHLYLGTERD*RRGRNTAGGCL
Trigger: CAGGCAGCCCCCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCTCAGTCCCTAGATACAGGTGTGCCGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS TCA 72 bp TCCCTGGGCTTCTCCGGCACACCTGTATCTAGGGACTaGGCGCGACTGACGCAGAGGTCGCAATACCGCTGG +
Preference number: 6 (lower is better)
Translates to: SLGFSGTPVSRD*ARLTQRSQYRW
Trigger: CCAGCGGTATTGCGACCTCTGCGTCAGTCGCGCTCAGTCCCTAGATACAGGTGTGCCGGAGAAGCCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000636876.1
CDS TCA 72 bp CGGGTTCTGGCGCTCCTGAGTGCCAGATCAGTCTCCTaGGTGCTAGGCCCTGATGTGGAGGGACTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: RVLALLSARSVS*VLGPDVEGLLP
Trigger: TGGAAGCAGTCCCTCCACATCAGGGCCTAGCACTCAGGAGACTGATCTGGCACTCAGGAGCGCCAGAACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS GCA 72 bp AGTTTTCTCAGCGAAGTCTCACAGGACAATGGCGCCTaGGCCAGTGGCTTGAAGGCTCGGCTCAAGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SFLSEVSQDNGA*ASGLKARLKPA
Trigger: GGCGGGCTTGAGCCGAGCCTTCAAGCCACTGGCGCAGGCGCCATTGTCCTGTGAGACTTCGCTGAGAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538696.5
ENST00000564846.1
ENST00000635747.1
ENST00000636876.1
ENST00000637223.1
CDS CCA 72 bp TACCCGGGGCCTCGCCTTCTGTTACAGGGGCCCAGGTaGGAGGCAGTCTGTGCACCACTTCCTAAGAACACT +
Preference number: 6 (lower is better)
Translates to: YPGPRLLLQGPR*EAVCAPLPKNT
Trigger: AGTGTTCTTAGGAAGTGGTGCACAGACTGCCTCCCACCTGGGCCCCTGTAACAGAAGGCGAGGCCCCGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636964.1
CDS TCA 72 bp GACCAGAGGGCCCAACTCCTTTCCCAAAGTCACACATaGGCTGTAGGCTGGAGGGGACAGCCCAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: DQRAQLLSQSHT*AVGWRGQPSLQ
Trigger: CTGAAGGCTGGGCTGTCCCCTCCAGCCTACAGCTCATGTGTGACTTTGGGAAAGGAGTTGGGCCCTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS CAA 72 bp GGAGGTGGCCTCACCAGCGTCTCCGGCTTGAGATTCTaGATGATGGGGTTCTCACGGACAGACAGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: GGGLTSVSGLRF*MMGFSRTDRWC
Trigger: GCACCACCTGTCTGTCCGTGAGAACCCCATCATCAAGAATCTCAAGCCGGAGACGCTGGTGAGGCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564752.1
ENST00000636212.1
ENST00000636674.1
ENST00000636964.1
ENST00000638076.1
CDS CAA 90 bp CGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCCTTTGAATTaGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: RAGSLISAHRAMPLN*SFLSEVSQDNGACA
Trigger: GGCGCAGGCGCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564846.1
ENST00000635747.1
ENST00000637223.1
CDS CAA 90 bp GGGAGCCGTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCCTTaGAATTTGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGCGCC +
Preference number: 6 (lower is better)
Translates to: GSRAGSLISAHRAMP*NLSFLSEVSQDNGA
Trigger: GGCGCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCACGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564846.1
ENST00000635747.1
ENST00000637223.1
CDS CAA 90 bp GGTTTCCCCATCTATAACACAAGAGAGGTGGCCCAGAGGGCCTACTaGGACCGTTCGGGTTCTGGCGCTCCTGAGTGCCAGATCAGTCTC +
Preference number: 6 (lower is better)
Translates to: GFPIYNTREVAQRAY*DRSGSGAPECQISL
Trigger: GAGACTGATCTGGCACTCAGGAGCGCCAGAACCCGAACGGTCCAAGTAGGCCCTCTGGGCCACCTCTCTTGTGTTATAGATGGGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 72 bp GATGGACGCTTCCAGCTGGAATGTCACTCCAAAAAGTaGCTGGTCCCTTTAGCAGGCCAGCCCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: DGRFQLECHSKK*LVPLAGQPSLQ
Trigger: CTGGAGGCTGGGCTGGCCTGCTAAAGGGACCAGCCACTTTTTGGAGTGACATTCCAGCTGGAAGCGTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS CCA 72 bp TCTATAACACAAGAGAGGTGGCCCAGAGGGCCTACTTaGACCGTTCGGGTTCTGGCGCTCCTGAGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SITQERWPRGPT*TVRVLALLSAR
Trigger: TCTGGCACTCAGGAGCGCCAGAACCCGAACGGTCCAAGTAGGCCCTCTGGGCCACCTCTCTTGTGTTATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CAA 72 bp ATCTATAACACAAGAGAGGTGGCCCAGAGGGCCTACTaGGACCGTTCGGGTTCTGGCGCTCCTGAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: IYNTREVAQRAY*DRSGSGAPECQ
Trigger: CTGGCACTCAGGAGCGCCAGAACCCGAACGGTCCAAGTAGGCCCTCTGGGCCACCTCTCTTGTGTTATAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 72 bp CACGCCAGGCTGAGGCTCAAATCAAAAGCCCTTTCTTaGGGCATATTTTCCATCCCTCCAGGCCACCGGCAG +
Preference number: 6 (lower is better)
Translates to: HARLRLKSKALS*GIFSIPPGHRQ
Trigger: CTGCCGGTGGCCTGGAGGGATGGAAAATATGCCCCAAGAAAGGGCTTTTGATTTGAGCCTCAGCCTGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564846.1
ENST00000636020.1
CDS CCA 72 bp TGGGCCTTGGTTTCCCCATCTATAACACAAGAGAGGTaGCCCAGAGGGCCTACTTGGACCGTTCGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: WALVSPSITQER*PRGPTWTVRVL
Trigger: CAGAACCCGAACGGTCCAAGTAGGCCCTCTGGGCCACCTCTCTTGTGTTATAGATGGGGAAACCAAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CAA 90 bp AGGCAGTCTGTGCACCACTTCCTAAGAACACTTGAGCATCCTAGCTaGGGGCAGGCGACAGTGCCCTCACCTAGCAGAATGCCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RQSVHHFLRTLEHPS*GQATVPSPSRMPLV
Trigger: CACCAAAGGCATTCTGCTAGGTGAGGGCACTGTCGCCTGCCCCAAGCTAGGATGCTCAAGTGTTCTTAGGAAGTGGTGCACAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636964.1
CDS TCA 72 bp AGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAGGGAATACCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: RPCGSSPQHWAC*VETTREGIPAG
Trigger: GCCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636314.1
ENST00000637450.1
CDS TCA 72 bp CCTGAGTGCCAGATCAGTCTCCTGAGTGCTAGGCCCTaGTGTGGAGGGACTGCTTCCAAACCAGGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: PECQISLLSARP*CGGTASKPGSK
Trigger: CTTTGAACCTGGTTTGGAAGCAGTCCCTCCACATCAGGGCCTAGCACTCAGGAGACTGATCTGGCACTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 72 bp AGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAGGGAATACCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: RPCGSSPQHWAC*VETTREGIPAA
Trigger: CGCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS GCA 72 bp GGGTCCTTGACCTCTCCCTGGACCTCCAGTCACTTCTaGCTCAGCCTCCCCAAATGTTTTACGGTTTCCCAA +
Preference number: 6 (lower is better)
Translates to: GSLTSPWTSSHF*LSLPKCFTVSQ
Trigger: TTGGGAAACCGTAAAACATTTGGGGAGGCTGAGGCAGAAGTGACTGGAGGTCCAGGGAGAGGTCAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564846.1
ENST00000636020.1
CDS CCA 72 bp AGAGCCCTGTGCACCATTTCACACTCACCATGGCAATaGGACGCCCAAAGTCCAGAACCCAGTTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: RALCTISHSPWQ*DAQSPEPSSAV
Trigger: CACTGCAGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGGTGAGTGTGAAATGGTGCACAGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CCA 72 bp CTGGTCAGAGCCCTGTGCACCATTTCACACTCACCATaGCAATGGGACGCCCAAAGTCCAGAACCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LVRALCTISHSP*QWDAQSPEPSS
Trigger: AGAACTGGGTTCTGGACTTTGGGCGTCCCATTGCCATGGTGAGTGTGAAATGGTGCACAGGGCTCTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CAA 90 bp GGGGGTGCGGTGCTCCACTTCCTTTCCTATACCCCTTTGTCTGTCTaGGTGATTTGGTTCAACCTGGTTCACCTGCTTCCAGACACAGGC +
Preference number: 6 (lower is better)
Translates to: GGAVLHFLSYTPLSV*VIWFNLVHLLPDTG
Trigger: GCCTGTGTCTGGAAGCAGGTGAACCAGGTTGAACCAAATCACCAAGACAGACAAAGGGGTATAGGAAAGGAAGTGGAGCACCGCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CAA 90 bp GACGGAGGTGGGGGTGCGGTGCTCCACTTCCTTTCCTATACCCCTTaGTCTGTCTTGGTGATTTGGTTCAACCTGGTTCACCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: DGGGGAVLHFLSYTP*SVLVIWFNLVHLLP
Trigger: TGGAAGCAGGTGAACCAGGTTGAACCAAATCACCAAGACAGACAAAGGGGTATAGGAAAGGAAGTGGAGCACCGCACCCCCACCTCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS TCA 72 bp CCTGGGTGGCTGGCCCAGCCTGCTGAAGGCACCTTCTaGTTTCTGAGTGGTCCCAGCAAACATGAAGAAAAT +
Preference number: 6 (lower is better)
Translates to: PGWLAQPAEGTF*FLSGPSKHEEN
Trigger: ATTTTCTTCATGTTTGCTGGGACCACTCAGAAATCAGAAGGTGCCTTCAGCAGGCTGGGCCAGCCACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS GCA 72 bp TTGTTGAGTGGAAACCACTCGAGAGGGAATACCAGCTaGGGAGCAAATGGAAGAATGGGCTCACCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: LLSGNHSRGNTS*GANGRMGSPGH
Trigger: GTGCCCAGGTGAGCCCATTCTTCCATTTGCTCCGCAGCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CAA 72 bp GCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCCTTaGAATTTGAGTTTTCTCAGCGAAGTCTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: AGSLISAHRAMP*NLSFLSEVSQD
Trigger: GTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564846.1
ENST00000635747.1
ENST00000637223.1
CDS CAA 90 bp GGTGCTCCACTTCCTTTCCTATACCCCTTTGTCTGTCTTGGTGATTaGGTTCAACCTGGTTCACCTGCTTCCAGACACAGGCCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GAPLPFLYPFVCLGD*VQPGSPASRHRPEG
Trigger: CCCCTCTGGCCTGTGTCTGGAAGCAGGTGAACCAGGTTGAACCAAATCACCAAGACAGACAAAGGGGTATAGGAAAGGAAGTGGAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS TCA 72 bp TTACAGTATGACTGTTCAGGACCACCAGTTCCCCCATaGGAGTTGGGGCAAAGTATGACTCTTCAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: LQYDCSGPPVPP*ELGQSMTLQAP
Trigger: GGGGGCCTGAAGAGTCATACTTTGCCCCAACTCTCATGGGGGAACTGGTGGTCCTGAACAGTCATACTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS GCA 72 bp CACTCGGCAAATTCAAGCCACACTAAGTGTCCTCAGTaGTGGTCAGAGCCCTGTGCACCATTTCACACTCAC +
Preference number: 6 (lower is better)
Translates to: HSANSSHTKCPQ*WSEPCAPFHTH
Trigger: GTGAGTGTGAAATGGTGCACAGGGCTCTGACCAGCACTGAGGACACTTAGTGTGGCTTGAATTTGCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CAA 72 bp GGGGGTGCGGTGCTCCACTTCCTTTCCTATACCCCTTaGTCTGTCTTGGTGATTTGGTTCAACCTGGTTCAC +
Preference number: 6 (lower is better)
Translates to: GGAVLHFLSYTP*SVLVIWFNLVH
Trigger: GTGAACCAGGTTGAACCAAATCACCAAGACAGACAAAGGGGTATAGGAAAGGAAGTGGAGCACCGCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CAA 90 bp GCAGCCTCATCAGCGCTCACAGAGCCATGCTTTTTACCTTTGAATTaGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: AASSALTEPCFLPLN*SFLSEVSQDNGACA
Trigger: GGCGCAGGCGCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGTAAAAAGCATGGCTCTGTGAGCGCTGATGAGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538696.5
CDS CAA 90 bp GTGCGGGCAGCCTCATCAGCGCTCACAGAGCCATGCTTTTTACCTTaGAATTTGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGCGCC +
Preference number: 6 (lower is better)
Translates to: VRAASSALTEPCFLP*NLSFLSEVSQDNGA
Trigger: GGCGCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGTAAAAAGCATGGCTCTGTGAGCGCTGATGAGGCTGCCCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538696.5
CDS TCA 72 bp AGGCCATGTGGAAGTAGTCCCCAACACTGGGCTTGTTaGGTGGAAACCACTCGAGAGGGAATACCAGATCTA +
Preference number: 6 (lower is better)
Translates to: RPCGSSPQHWAC*VETTREGIPDL
Trigger: TAGATCTGGTATTCCCTCTCGAGTGGTTTCCACTCAACAAGCCCAGTGTTGGGGACTACTTCCACATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563917.2
ENST00000638144.1
CDS TCA 72 bp CAGACACAGGCCAGAGGGGGTTACAGTATTACAGTATaGCTGTTCAGGACCACCAGTTCCCCCATGAGAGTT +
Preference number: 6 (lower is better)
Translates to: QTQARGGYSITV*LFRTTSSPMRV
Trigger: AACTCTCATGGGGGAACTGGTGGTCCTGAACAGTCATACTGTAATACTGTAACCCCCTCTGGCCTGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS CAA 72 bp AGCCTCATCAGCGCTCACAGAGCCATGCCTTTGAATTaGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGC +
Preference number: 6 (lower is better)
Translates to: SLISAHRAMPLN*SFLSEVSQDNG
Trigger: GCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGCATGGCTCTGTGAGCGCTGATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564846.1
ENST00000635747.1
ENST00000637223.1
CDS TCA 72 bp AGTTGCCTGACGGGCCAAGTCATAGAGCTAAGGATATaGAGGCATCCAGGCCTATTCTCTCAGTTTACTAGG +
Preference number: 6 (lower is better)
Translates to: SCLTGQVIELRI*RHPGLFSQFTR
Trigger: CCTAGTAAACTGAGAGAATAGGCCTGGATGCCTTCATATCCTTAGCTCTATGACTTGGCCCGTCAGGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569336.2
CDS TCA 72 bp GAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCCATTTTTACCTTTGAATTTGAG +
Preference number: 6 (lower is better)
Translates to: EVRRLRPSWLTR*NPVSIFTFEFE
Trigger: CTCAAATTCAAAGGTAAAAATGGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636876.1
CDS CAA 72 bp GCCTCATCAGCGCTCACAGAGCCATGCTTTTTACCTTaGAATTTGAGTTTTCTCAGCGAAGTCTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: ASSALTEPCFLP*NLSFLSEVSQD
Trigger: GTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGTAAAAAGCATGGCTCTGTGAGCGCTGATGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538696.5
CDS CAA 72 bp TCAGCGCTCACAGAGCCATGCTTTTTACCTTTGAATTaGAGTTTTCTCAGCGAAGTCTCACAGGACAATGGC +
Preference number: 6 (lower is better)
Translates to: SALTEPCFLPLN*SFLSEVSQDNG
Trigger: GCCATTGTCCTGTGAGACTTCGCTGAGAAAACTCAAATTCAAAGGTAAAAAGCATGGCTCTGTGAGCGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538696.5
CDS CCA 72 bp AAATGCCACTGTTTAACTGAAAACACACCGGAGTTCTaGGATTATACCCCTCCTACTTCTGGAGATTTGAAG +
Preference number: 6 (lower is better)
Translates to: KCHCLTENTPEF*DYTPPTSGDLK
Trigger: CTTCAAATCTCCAGAAGTAGGAGGGGTATAATCCCAGAACTCCGGTGTGTTTTCAGTTAAACAGTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS TCA 72 bp AAAATACTCTGTGATAGCAAAACATCAGAAATAGGCTaGCTCTTCAATCAAACAGGACCAGTTGAATCCCTG +
Preference number: 6 (lower is better)
Translates to: KILCDSKTSEIG*LFNQTGPVESL
Trigger: CAGGGATTCAACTGGTCCTGTTTGATTGAAGAGTCAGCCTATTTCTGATGTTTTGCTATCACAGAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 72 bp ATTTCACAACCCCCAAACTGTACTTCTAGTATCTGTTaGTTGAAAACACACATAAGGCCCACAAGTTTCAAG +
Preference number: 6 (lower is better)
Translates to: ISQPPNCTSSIC*LKTHIRPTSFK
Trigger: CTTGAAACTTGTGGGCCTTATGTGTGTTTTCAATCAACAGATACTAGAAGTACAGTTTGGGGGTTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS CCA 72 bp CACATAAGGCCCACAAGTTTCAAGGAAGGATTTAGATaGTTCTCTCTTTTAACACAGAAATGCCATATTGGA +
Preference number: 6 (lower is better)
Translates to: HIRPTSFKEGFR*FSLLTQKCHIG
Trigger: TCCAATATGGCATTTCTGTGTTAAAAGAGAGAACCATCTAAATCCTTCCTTGAAACTTGTGGGCCTTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635754.1
CDS TCA 72 bp AGTTCTGGGATTATACCCCTCCTACTTCTGGAGATTTaGAGTATCTTTCTTCAATACAAAATGATGGTGATA +
Preference number: 6 (lower is better)
Translates to: SSGIIPLLLLEI*SIFLQYKMMVI
Trigger: TATCACCATCATTTTGTATTGAAGAAAGATACTTCAAATCTCCAGAAGTAGGAGGGGTATAATCCCAGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636674.1
ENST00000636964.1
CDS GCA 72 bp TCTCTCTCTCTCTTACTCAGTGTGCATGTGTTTATCTaGCTCTTTACCTACATCATATATATACTTGCTAAA +
Preference number: 6 (lower is better)
Translates to: SLSLLLSVHVFI*LFTYIIYILAK
Trigger: TTTAGCAAGTATATATATGATGTAGGTAAAGAGGCAGATAAACACATGCACACTGAGTAAGAGAGAGAGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635754.1