Pregenerated sensors for CLEC2A (Homo sapiens)
Ensembl gene IDs: ENSG00000188393Ensembl transcript IDs: ENST00000339766.8, ENST00000455827.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTATTAGGGGACCATCCATCAGGAGGTaGTTAGTTCATGAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: PPKTHKLKANHQCDGIRGPSIRR*LVHEDG Trigger: TCCATCCTCATGAACTAATCACCTCCTGATGGATGG...TCCCCTAATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| 3UTR TCA 72 bp | GTTCTGAGTATTTGGGTCCTCCCAAAACTCATAAATTaGAAGCTAATCACCAGTGTGATGGTATTAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: VLSIWVLPKLIN*KLITSVMVLGD Trigger: ATCCCCTAATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTCAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CCA 90 bp | GAGAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCATCTGATGGTATTAGGGGATaGAGCCATCCATCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ENGLVSLTMAGHSKKFPSDGIRG*SHPSGG Trigger: ACCTCCTGATGGATGGCTCCATCCCCTAATACCATC...AGATGGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR TCA 90 bp | GAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCATCTATCCATCCATCAGGAGGTaGTTAGTTCATGAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: ERPCLFNHGRAQQEVSIYPSIRR*LVHEDG Trigger: TCCATCCTCATGAACTAATCACCTCCTGATGGATGG...ATAGATGGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | GAGAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCATCTAATCTCCTTGTTTCCTaGTTAGTCCAATCCAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ENGLVSLTMAGHSKKFPSNLLVS*LVQSSA Trigger: TGCACTGGATTGGACTAAGCAGGAAACAAGGAGATT...AGATGGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGTATTTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGCCATCCCGCAGCTCTaGATTAATCATGGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SEYLGPPKTHKLKANHQCAIPQL*INHGKA Trigger: CGCCTTGCCATGATTAATCCAGAGCTGCGGGATGGC...ACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CCA 90 bp | CCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTATTAGGGGACAAGGCGCTAACCGATaGAGATCAGTAGGAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PPKTHKLKANHQCDGIRGQGANR*RSVGED Trigger: GTCCTCTCCTACTGATCTCCATCGGTTAGCGCCTTG...TCCCCTAATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTGCCACAGGTTTAGCATaGTTGGACCATGTGGCTATC | + |
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Preference number: 4 (lower is better) Translates to: IKDKDEDRFNCFLLTGDIATGLA*LDHVAI Trigger: GATAGCCACATGGTCCAAGCATGCTAAACCTGTGGC...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR GCA 90 bp | CCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTATTAGGGGAGCCACAGGTTTAGCATaGTTGGACCATGTGGCTATC | + |
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Preference number: 4 (lower is better) Translates to: PPKTHKLKANHQCDGIRGATGLA*LDHVAI Trigger: GATAGCCACATGGTCCAAGCATGCTAAACCTGTGGC...TCCCCTAATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CCA 90 bp | TCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGGCCATCCCGCAGCTCTaGATTAATCATGGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SNCRYIKDKDEDRFNCFLAIPQL*INHGKA Trigger: CGCCTTGCCATGATTAATCCAGAGCTGCGGGATGGC...CAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTTTGATGGCCAACCATTaGATGTGGTGCCATTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: IKDKDEDRFNCFLLTGDILMANH*MWCHLS Trigger: GGACAAATGGCACCACATTCAATGGTTGGCCATCAA...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTTTAACTGCTTCCTGCTaGCAGGGGACATTGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IKDKDEDRFNCFLLTGDILTASC*QGTLFW Trigger: CCAAAACAATGTCCCCTGTCAGCAGGAAGCAGTTAA...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CCA 90 bp | CATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCCAGGGGACATTGTTTTaGGGAAACGGCAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HLTAVILRIRMKTDLTASQGTLF*GNGSQS Trigger: GCTCTGACTGCCGTTTCCCCAAAACAATGTCCCCTG...GGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | TATTTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTGAACTATCCGATGTATaGAGCCATCAGCTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YLGPPKTHKLKANHQCDGELSDV*SHQLCH Trigger: ATGGCAGAGCTGATGGCTTCATACATCGGATAGTTC...ACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | CGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGCTTAGTCCAATCCAGTaGATATCAGTTCCTGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: RYIKDKDEDRFNCFLLTGLSPIQ*ISVPAY Trigger: GTACGCAGGAACTGATATGCACTGGATTGGACTAAG...CCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | TCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGGAACTATCCGATGTATaGAGCCATCAGCTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SNCRYIKDKDEDRFNCFLELSDV*SHQLCH Trigger: ATGGCAGAGCTGATGGCTTCATACATCGGATAGTTC...CAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTAGACCATTTGGAGTTTaGTGGCCAACCATTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: IKDKDEDRFNCFLLTGDIRPFGV*WPTIEC Trigger: ACATTCAATGGTTGGCCATCAAACTCCAAATGGTCT...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR GCA 90 bp | GTACATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTGTCGGAGGCTCCAGTTaGAAGACCATTTGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: VHLTAVILRIRMKTDLTAVGGSS*KTIWSL Trigger: CAAACTCCAAATGGTCTTGCAACTGGAGCCTCCGAC...AGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR GCA 90 bp | TCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGGAAGACAGATTTAACTaGTTCCTGCTGACAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SNCRYIKDKDEDRFNCFLEDRFN*FLLTGD Trigger: GTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTC...CAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | GAGTATTTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATTTTCAAACCAACCATTaGATGTGGTGCCATTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EYLGPPKTHKLKANHQCDFQTNH*MWCHLS Trigger: GGACAAATGGCACCACATTCAATGGTTGGTTTGAAA...ATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTGTGCATATCAGTTCCTaGGTACCTCTTCAAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IKDKDEDRFNCFLLTGDIVHISS*VPLQKF Trigger: GAATTTTTGAAGAGGTACGCAGGAACTGATATGCAC...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| 3UTR CAA 72 bp | TGTTCTGAGTATTTGGGTCCTCCCAAAACTCATAAATaGAAAGCTAATCACCAGTGTGATGGTATTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: CSEYLGPPKTHK*KANHQCDGIRG Trigger: TCCCCTAATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTCAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGTATTTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGTGCATATCAGTTCCTaGGTACCTCTTCAAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: SEYLGPPKTHKLKANHQCVHISS*VPLQKF Trigger: GAATTTTTGAAGAGGTACGCAGGAACTGATATGCAC...ACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR GCA 90 bp | CATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCAATCTCCTTGTTTCCTaGTTAGTCCAATCCAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HLTAVILRIRMKTDLTASNLLVS*LVQSSA Trigger: TGCACTGGATTGGACTAAGCAGGAAACAAGGAGATT...GGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR TCA 90 bp | GAGTATTTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATCCAAAACTCATAAATTaGAAGCTAATCACCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EYLGPPKTHKLKANHQCDPKLIN*KLITSV Trigger: CACACTGGTGATTAGCTTTCAATTTATGAGTTTTGG...ATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAAATACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR TCA 90 bp | CATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCGAGGATGAATTGCTCTaGATTGATAAATTTACTCCC | + |
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Preference number: 4 (lower is better) Translates to: HLTAVILRIRMKTDLTASEDELL*IDKFTP Trigger: GGGAGTAAATTTATCAATTCAGAGCAATTCATCCTC...GGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CCA 90 bp | GTACATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTACTGTGAATCAAAGATaGAAAGAGGAGGATGAATTG | + |
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Preference number: 4 (lower is better) Translates to: VHLTAVILRIRMKTDLTATVNQR*KEEDEL Trigger: CAATTCATCCTCCTCTTTCCATCTTTGATTCACAGT...AGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATGTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS TCA 90 bp | GGAGGCTCCAGTTGCAAGACCATTTGGAGTTTGATGGCCAACCATTaGATGTGGTGCCATTTGTCCATTTCCAAGAATCTCCTTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: GGSSCKTIWSLMANH*MWCHLSISKNLLVS Trigger: GGAAACAAGGAGATTCTTGGAAATGGACAAATGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CAA 90 bp | GAGAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCATCTCTATGTTCTGAGTATTaGGGTCCTCCCAAAACTCAT | + |
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Preference number: 5 (lower is better) Translates to: ENGLVSLTMAGHSKKFPSLCSEY*GPPKTH Trigger: ATGAGTTTTGGGAGGACCCAAATACTCAGAACATAG...AGATGGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAGAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCCCCAAAACTCATAAATaGAAAGCTAATCACCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SRERPCLFNHGRAQQEVSPKTHK*KANHQC Trigger: ACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGG...GGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTCTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS TCA 90 bp | ATCAGAAAAATAGAAACACTTATCTCTCACTCCAAGCCAGTCCCCTaGACATGCCACAGGTTTAGCATGCTTGGACCATGTGGCTATCAT | + |
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Preference number: 5 (lower is better) Translates to: IRKIETLISHSKPVP*TCHRFSMLGPCGYH Trigger: ATGATAGCCACATGGTCCAAGCATGCTAAACCTGTGGCATGTTCAGGGGACTGGCTTGGAGTGAGAGATAAGTGTTTCTATTTTTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | GAGAACGGCCTTGTCTCTTTAACCATGGCAGGGCACAGCAAGAAGTTTCCATCTTTGCTGCAAATCCACTaGATATCAATAAATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ENGLVSLTMAGHSKKFPSLLQIH*ISINPL Trigger: CAGAGGATTTATTGATATCAAGTGGATTTGCAGCAA...AGATGGAAACTTCTTGCTGTGCCCTGCCATGGTTAAAGAGACAAGGCCGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | CGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGCAGTTGCAAGACCATTaGGAGTTTGATGGCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: RYIKDKDEDRFNCFLLTGQLQDH*EFDGQP Trigger: TGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTG...CCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS GCA 90 bp | GTCCATTTCCAAGAATCTCCTTGTTTCCTGCTTAGTCCAATCCAGTaGATATCAGTTCCTGCGTACCTCTTCAAAAATTCCATGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VHFQESPCFLLSPIQ*ISVPAYLFKNSMSS Trigger: AGAAGACATGGAATTTTTGAAGAGGTACGCAGGAACTGATATGCACTGGATTGGACTAAGCAGGAAACAAGGAGATTCTTGGAAATGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | ATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCTGACAGGGGACATTTTTGATGGCCAACCATaGAATGTGGTGCCATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: IKDKDEDRFNCFLLTGDIFDGQP*NVVPFV Trigger: GACAAATGGCACCACATTCAATGGTTGGCCATCAAA...AATGTCCCCTGTCAGCAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGATTGTGCCCTTATAAAAGGCTCCAGAGAACGGCCTTGTCTCTTTAACGCCAATCTTCCAGTTTaGTATCAACTTGGGAACTAT | + |
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Preference number: 5 (lower is better) Translates to: KCDCALIKGSRERPCLFNANLPV*YQLGNY Trigger: ATAGTTCCCAAGTTGATACAAAACTGGAAGATTGGC...GTTAAAGAGACAAGGCCGTTCTCTGGAGCCTTTTATAAGGGCACAATCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | AAATGTGATTGTGCCCTTATAAAAGGCTCCAGAGAACGGCCTTGTCTCTTTAACATTTCAAACCAACCATaGAATGTGGTGCCATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: KCDCALIKGSRERPCLFNISNQP*NVVPFV Trigger: GACAAATGGCACCACATTCAATGGTTGGTTTGAAAT...GTTAAAGAGACAAGGCCGTTCTCTGGAGCCTTTTATAAGGGCACAATCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | CATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCACAGGTTTAGCATGCTaGGACCATGTGGCTATCATA | + |
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Preference number: 5 (lower is better) Translates to: HLTAVILRIRMKTDLTASTGLAC*DHVAII Trigger: TATGATAGCCACATGGTCCAAGCATGCTAAACCTGT...GGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CAA 90 bp | TTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTATTCAGTTTTGTATCAACTaGGGAACTATCCGATGTATG | + |
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Preference number: 5 (lower is better) Translates to: LGPPKTHKLKANHQCDGIQFCIN*GTIRCM Trigger: CATACATCGGATAGTTCCCAAGTTGATACAAAACTG...AATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | TCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTTCCTGCAGTTTTGTATCAACTaGGGAACTATCCGATGTATG | + |
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Preference number: 5 (lower is better) Translates to: SNCRYIKDKDEDRFNCFLQFCIN*GTIRCM Trigger: CATACATCGGATAGTTCCCAAGTTGATACAAAACTG...CAGGAAGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CAA 90 bp | TTGGGTCCTCCCAAAACTCATAAATTGAAAGCTAATCACCAGTGTGATGGTATTAAATTCCATGTCTTCTaGTGTATCAATCTGAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LGPPKTHKLKANHQCDGIKFHVF*CINLSK Trigger: CTTGCTCAGATTGATACACAAGAAGACATGGAATTT...AATACCATCACACTGGTGATTAGCTTTCAATTTATGAGTTTTGGGAGGACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS-3UTR CAA 90 bp | GTACATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCTGCCAATCTTCCAGTTTaGTATCAACTTGGGAACTAT | + |
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Preference number: 5 (lower is better) Translates to: VHLTAVILRIRMKTDLTAANLPV*YQLGNY Trigger: ATAGTTCCCAAGTTGATACAAAACTGGAAGATTGGC...AGCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATGTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS-3UTR CAA 90 bp | AGTACATCTAACTGCCGTTATATTAAGGATAAGGATGAAGACAGATTTAACTGCAAATTCCATGTCTTCTaGTGTATCAATCTGAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: STSNCRYIKDKDEDRFNCKFHVF*CINLSK Trigger: CTTGCTCAGATTGATACACAAGAAGACATGGAATTT...GCAGTTAAATCTGTCTTCATCCTTATCCTTAATATAACGGCAGTTAGATGTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 72 bp | GGTCCCAGCAGAAGAAGCCATTGTCGGAGGCTCCAGTaGCAAGACCATTTGGAGTTTGATGGCCAACCATTG | + |
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Preference number: 6 (lower is better) Translates to: GPSRRSHCRRLQ*QDHLEFDGQPL Trigger: CAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCCGACAATGGCTTCTTCTGCTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 72 bp | AGAGGCCTATCTAAGGGGTCCCAGCAGAAGAAGCCATaGTCGGAGGCTCCAGTTGCAAGACCATTTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: RGLSKGSQQKKP*SEAPVARPFGV Trigger: AACTCCAAATGGTCTTGCAACTGGAGCCTCCGACAATGGCTTCTTCTGCTGGGACCCCTTAGATAGGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 72 bp | AGATTTAACTGCTTCCTGCTGACAGGGGACATTGTTTaGGGGAAACGGCAGTCAGAGCTCCCTCAGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RFNCFLLTGDIV*GKRQSELPQRP Trigger: AGGCCTCTGAGGGAGCTCTGACTGCCGTTTCCCCAAAACAATGTCCCCTGTCAGCAGGAAGCAGTTAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CCA 72 bp | ATGTATGAAGCCATCAGCTCTGCCATCCCGCAGCTCTaGATTAATCATGGCAAGGCGCTAACCGATGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: MYEAISSAIPQL*INHGKALTDGD Trigger: ATCTCCATCGGTTAGCGCCTTGCCATGATTAATCCAGAGCTGCGGGATGGCAGAGCTGATGGCTTCATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455827.2 |
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| CDS CAA 90 bp | CCCAGCAGAAGAAGCCATTGTCGGAGGCTCCAGTTGCAAGACCATTaGGAGTTTGATGGCCAACCATTGAATGTGGTGCCATTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PSRRSHCRRLQLQDH*EFDGQPLNVVPFVH Trigger: ATGGACAAATGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCCGACAATGGCTTCTTCTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 90 bp | TATCTAAGGGGTCCCAGCAGAAGAAGCCATTGTCGGAGGCTCCAGTaGCAAGACCATTTGGAGTTTGATGGCCAACCATTGAATGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: YLRGPSRRSHCRRLQ*QDHLEFDGQPLNVV Trigger: CACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCCGACAATGGCTTCTTCTGCTGGGACCCCTTAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 72 bp | AGAAGCCATTGTCGGAGGCTCCAGTTGCAAGACCATTaGGAGTTTGATGGCCAACCATTGAATGTGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RSHCRRLQLQDH*EFDGQPLNVVP Trigger: TGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCCGACAATGGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 90 bp | CGGAGGCTCCAGTTGCAAGACCATTTGGAGTTTGATGGCCAACCATaGAATGTGGTGCCATTTGTCCATTTCCAAGAATCTCCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RRLQLQDHLEFDGQP*NVVPFVHFQESPCF Trigger: GAAACAAGGAGATTCTTGGAAATGGACAAATGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTGGAGCCTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS TCA 72 bp | ATAGAAACACTTATCTCTCACTCCAAGCCAGTCCCCTaGACATGCCACAGGTTTAGCATGCTTGGACCATGT | + |
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Preference number: 6 (lower is better) Translates to: IETLISHSKPVP*TCHRFSMLGPC Trigger: ACATGGTCCAAGCATGCTAAACCTGTGGCATGTTCAGGGGACTGGCTTGGAGTGAGAGATAAGTGTTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS GCA 72 bp | CCAAGCCAGTCCCCTGAACATGCCACAGGTTTAGCATaGTTGGACCATGTGGCTATCATAATAATGCAAACT | + |
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Preference number: 6 (lower is better) Translates to: PSQSPEHATGLA*LDHVAIIIMQT Trigger: AGTTTGCATTATTATGATAGCCACATGGTCCAAGCATGCTAAACCTGTGGCATGTTCAGGGGACTGGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS CAA 72 bp | AGCCAGTCCCCTGAACATGCCACAGGTTTAGCATGCTaGGACCATGTGGCTATCATAATAATGCAAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SQSPEHATGLAC*DHVAIIIMQTV Trigger: TACAGTTTGCATTATTATGATAGCCACATGGTCCAAGCATGCTAAACCTGTGGCATGTTCAGGGGACTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS TCA 72 bp | AGTTGCAAGACCATTTGGAGTTTGATGGCCAACCATTaGATGTGGTGCCATTTGTCCATTTCCAAGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: SCKTIWSLMANH*MWCHLSISKNL Trigger: GAGATTCTTGGAAATGGACAAATGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS GCA 72 bp | CAAGAATCTCCTTGTTTCCTGCTTAGTCCAATCCAGTaGATATCAGTTCCTGCGTACCTCTTCAAAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: QESPCFLLSPIQ*ISVPAYLFKNS Trigger: GGAATTTTTGAAGAGGTACGCAGGAACTGATATGCACTGGATTGGACTAAGCAGGAAACAAGGAGATTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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| CDS CAA 72 bp | CAGTTGCAAGACCATTTGGAGTTTGATGGCCAACCATaGAATGTGGTGCCATTTGTCCATTTCCAAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: QLQDHLEFDGQP*NVVPFVHFQES Trigger: AGATTCTTGGAAATGGACAAATGGCACCACATTCAATGGTTGGCCATCAAACTCCAAATGGTCTTGCAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339766.8 |
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| CDS CAA 72 bp | AATACTCAGGAAGCACATAAGGCCAATCTTCCAGTTTaGTATCAACTTGGGAACTATCCGATGTATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: NTQEAHKANLPV*YQLGNYPMYEA Trigger: GGCTTCATACATCGGATAGTTCCCAAGTTGATACAAAACTGGAAGATTGGCCTTATGTGCTTCCTGAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339766.8 ENST00000455827.2 |
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